Definition | Desulfovibrio vulgaris DP4 chromosome, complete genome. |
---|---|
Accession | NC_008751 |
Length | 3,462,887 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 16 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1068443..1068454 | attL TCCTTGCTGGTG | N/A | Click |
2 | complement(1068859..1069581) | PHAGE_Vibrio_kappa: putative NAD-dependent DNA ligase; Dvul_0862; phage(gi165970237) | 5e-13 | Click |
3 | complement(1069931..1070302) | PHAGE_Burkho_KS9: major tail subunit gp10; Dvul_0863; phage(gi255033742) | 3e-05 | Click |
4 | complement(1070308..1070682) | PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; Dvul_0864; phage(gi374531660) | 4e-07 | Click |
5 | complement(1071045..1071374) | PHAGE_Geobac_E2: putative head-tail adaptor; Dvul_0865; phage(gi148747735) | 3e-14 | Click |
6 | complement(1071377..1071940) | PHAGE_Burkho_KS9: hypothetical protein gp6; Dvul_0866; phage(gi255033738) | 4e-08 | Click |
7 | complement(1072159..1073382) | PHAGE_Salmon_ST64B: Major capsid protein precursor; Dvul_0867; phage(gi23505451) | 9e-115 | Click |
8 | complement(1073342..1074094) | PHAGE_Salmon_ST64B: Pro-head protease; Dvul_0868; phage(gi23505450) | 7e-31 | Click |
9 | complement(1074075..1075304) | PHAGE_Salmon_ST64B: Portal Protein; Dvul_0869; phage(gi23505449) | 1e-71 | Click |
10 | complement(1075301..1076971) | PHAGE_Salmon_ST64B: Terminase large subunit; Dvul_0870; phage(gi23505447) | 7e-148 | Click |
11 | complement(1076971..1077429) | PHAGE_Tetras_SI1: terminase small subunit; Dvul_0871; phage(gi472342259) | 1e-14 | Click |
12 | complement(1077549..1079603) | PHAGE_Strept_1: transferase; Dvul_0872; phage(gi39653711) | 6e-53 | Click |
13 | complement(1079609..1079962) | PHAGE_Salmon_ST64B: hypothetical protein sb56; Dvul_0873; phage(gi23505500) | 8e-12 | Click |
14 | 1080327..1080734 | MucR family transcriptional regulator; Dvul_0874 | N/A | Click |
15 | 1080777..1081310 | cold-shock DNA-binding domain-containing protein; Dvul_0875 | N/A | Click |
16 | 1081307..1081963 | hypothetical protein; Dvul_0876 | N/A | Click |
17 | complement(1082097..1083146) | PROPHAGE_Shewan_MR-1: ISSod13, transposase; Dvul_0877; phage(gi24375047) | 1e-76 | Click |
18 | 1083154..1083165 | attR TCCTTGCTGGTG | N/A | Click |
Region 2, total : 33 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1745393..1745686) | PHAGE_Burkho_2: gp6, putative addiction module antidote protein; Dvul_1443; phage(gi134288715) | 1e-17 | Click |
2 | complement(1745670..1745984) | PHAGE_Burkho_2: gp7, putative addiction module killer protein; Dvul_1444; phage(gi134288691) | 1e-23 | Click |
3 | complement(1746207..1746446) | hypothetical protein; Dvul_1445 | N/A | Click |
4 | complement(1747426..1748505) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_46; Dvul_1446; phage(gi148727175) | 3e-41 | Click |
5 | complement(1748490..1749176) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_46; Dvul_1447; phage(gi148727175) | 2e-33 | Click |
6 | complement(1749173..1749733) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_45; Dvul_1448; phage(gi148727174) | 2e-20 | Click |
7 | complement(1749730..1750665) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_44; Dvul_1449; phage(gi148727173) | 5e-14 | Click |
8 | complement(1750668..1751204) | PHAGE_Entero_HK630: tail fiber assembly protein; Dvul_1450; phage(gi428782810) | 1e-07 | Click |
9 | complement(1751221..1752618) | PHAGE_Aeromo_phiO18P: putative tail fiber protein; Dvul_1451; phage(gi158518662) | 2e-34 | Click |
10 | complement(1752615..1753226) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_41; Dvul_1452; phage(gi148727169) | 7e-30 | Click |
11 | complement(1753223..1754434) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_40; Dvul_1453; phage(gi148727168) | 1e-89 | Click |
12 | 1754463..1754807 | plasmid maintenance system killer; Dvul_1454 | N/A | Click |
13 | 1754818..1755120 | PHAGE_Aeromo_Aes012: putative XRE family plasmid maintenance system antidote protein; Dvul_1455; phage(gi472438177) | 6e-14 | Click |
14 | complement(1755141..1755467) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_39; Dvul_1456; phage(gi148727167) | 7e-19 | Click |
15 | complement(1755471..1757267) | PHAGE_Aeromo_phiO18P: putative tail tape measure protein; Dvul_1457; phage(gi148727166) | 2e-119 | Click |
16 | complement(1757288..1757428) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_37; Dvul_1458; phage(gi148727165) | 2e-05 | Click |
17 | complement(1757473..1757733) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_36; Dvul_1459; phage(gi148727164) | 1e-14 | Click |
18 | complement(1757743..1758057) | hypothetical protein; Dvul_1460 | N/A | Click |
19 | complement(1758253..1758603) | PHAGE_Burkho_KL3: gp32; Dvul_1461; phage(gi327198077) | 2e-05 | Click |
20 | complement(1758600..1759028) | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p15; Dvul_1462; phage(gi30387394) | 1e-26 | Click |
21 | complement(1759025..1759231) | PHAGE_Aeromo_phiO18P: putative zinc finger protein; Dvul_1463; phage(gi148727160) | 3e-09 | Click |
22 | complement(1759240..1759728) | PHAGE_Aeromo_phiO18P: putative tail tube protein; Dvul_1464; phage(gi148727159) | 4e-38 | Click |
23 | complement(1759736..1760845) | PHAGE_Aeromo_phiO18P: putative tail sheath protein; Dvul_1465; phage(gi148727158) | 9e-82 | Click |
24 | complement(1760856..1761542) | PHAGE_Aeromo_phiO18P: putative tail completion protein; Dvul_1466; phage(gi148727157) | 2e-13 | Click |
25 | complement(1761535..1761999) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_27; Dvul_1467; phage(gi148727156) | 5e-12 | Click |
26 | complement(1762002..1762493) | PHAGE_Aeromo_phiO18P: putative head completion protein; Dvul_1468; phage(gi148727155) | 1e-10 | Click |
27 | complement(1762562..1763296) | PHAGE_Burkho_2: gp1, phage small terminase subunit; Dvul_1469; phage(gi134288705) | 1e-15 | Click |
28 | complement(1763299..1764324) | PHAGE_Burkho_phiE202: gp2, phage major capsid protein, P2 family; Dvul_1470; phage(gi134288740) | 9e-55 | Click |
29 | complement(1764333..1765193) | PHAGE_Aeromo_phiO18P: putative capsid scaffolding protein; Dvul_1471; phage(gi148727152) | 6e-37 | Click |
30 | 1765341..1767140 | PHAGE_Aeromo_phiO18P: putative terminase large subunit; Dvul_1472; phage(gi148727151) | 7e-133 | Click |
31 | 1767151..1768194 | PHAGE_Aeromo_phiO18P: putative portal protein; Dvul_1473; phage(gi148727149) | 8e-67 | Click |
32 | 1768313..1769038 | hypothetical protein; Dvul_1474 | N/A | Click |
33 | 1769160..1769399 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; Dvul_1475; phage(gi148727148) | 6e-10 | Click |
Region 3, total : 12 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1776368..1779127) | PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp40; Dvul_1484; phage(gi17313257) | 3e-124 | Click |
2 | 1778196..1778275 | attL AGCCCGCGCCGATGGCGGCGGTAATAGACGTAGGCCTTCTCCTGCACCGTCTCCGCCATGAAGAGGCGTCCGTAGTACAG | N/A | Click |
3 | complement(1779304..1779774) | hypothetical protein; Dvul_1485 | N/A | Click |
4 | complement(1779764..1780090) | hypothetical protein; Dvul_1486 | N/A | Click |
5 | 1780775..1781803 | PHAGE_Ralsto_phiRSA1: site-specific recombinase; Dvul_1487; phage(gi145708124) | 7e-12 | Click |
6 | complement(1782643..1782906) | PHAGE_Burkho_2: gp6, putative addiction module antidote protein; Dvul_1488; phage(gi134288715) | 3e-12 | Click |
7 | complement(1782963..1783544) | PHAGE_Vibrio_K139: hypothetical protein K139p38; Dvul_1489; phage(gi17975143) | 9e-19 | Click |
8 | 1783598..1783867 | PHAGE_Burkho_phiE202: gp6, pANL56; Dvul_1490; phage(gi134288760) | 2e-09 | Click |
9 | 1783854..1784171 | PHAGE_Burkho_phiE202: gp7, pANL12; Dvul_1491; phage(gi134288781) | 2e-05 | Click |
10 | complement(1784195..1784530) | hypothetical protein; Dvul_1492 | N/A | Click |
11 | 1784900..1785172 | hypothetical protein; Dvul_1494 | N/A | Click |
12 | 1785150..1785392 | CopG family protein; Dvul_1495 | N/A | Click |
13 | complement(1785488..1786192) | PHAGE_Vibrio_K139: putative tail length determinator; Dvul_1496; phage(gi17975141) | 3e-19 | Click |
14 | 1786387..1786466 | attR AGCCCGCGCCGATGGCGGCGGTAATAGACGTAGGCCTTCTCCTGCACCGTCTCCGCCATGAAGAGGCGTCCGTAGTACAG | N/A | Click |
Region 4, total : 42 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 3198009..3198055 | attL GCCTTTTAAGCAGAGAGTCGCAGGTTCGAATCCTGCACGACCCACCA | N/A | Click |
2 | complement(3198595..3199383) | PHAGE_Bordet_1: adenine DNA methyltransferase; Dvul_2741; phage(gi41179391) | 1e-56 | Click |
3 | complement(3199361..3199546) | PHAGE_Burkho_KS5: gp21; Dvul_2742; phage(gi327198019) | 8e-06 | Click |
4 | complement(3199543..3200622) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_46; Dvul_2743; phage(gi148727175) | 6e-41 | Click |
5 | complement(3200607..3201293) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_46; Dvul_2744; phage(gi148727175) | 3e-32 | Click |
6 | complement(3201290..3201850) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_45; Dvul_2745; phage(gi148727174) | 2e-20 | Click |
7 | complement(3201847..3202785) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_44; Dvul_2746; phage(gi148727173) | 2e-14 | Click |
8 | complement(3202788..3203225) | PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp23; Dvul_2747; phage(gi17313240) | 8e-09 | Click |
9 | complement(3203235..3204818) | PHAGE_Aeromo_phiO18P: putative tail fiber protein; Dvul_2748; phage(gi158518662) | 4e-33 | Click |
10 | complement(3204815..3205426) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_41; Dvul_2749; phage(gi148727169) | 7e-30 | Click |
11 | complement(3205423..3206631) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_40; Dvul_2750; phage(gi148727168) | 2e-89 | Click |
12 | complement(3206633..3206959) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_39; Dvul_2751; phage(gi148727167) | 5e-17 | Click |
13 | complement(3206963..3208759) | PHAGE_Aeromo_phiO18P: putative tail tape measure protein; Dvul_2752; phage(gi148727166) | 4e-120 | Click |
14 | complement(3208780..3208920) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_37; Dvul_2753; phage(gi148727165) | 2e-05 | Click |
15 | complement(3208965..3209225) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_36; Dvul_2754; phage(gi148727164) | 1e-14 | Click |
16 | complement(3209235..3209549) | hypothetical protein; Dvul_2755 | N/A | Click |
17 | complement(3209745..3210095) | PHAGE_Burkho_KL3: gp32; Dvul_2756; phage(gi327198077) | 2e-05 | Click |
18 | complement(3210092..3210520) | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p15; Dvul_2757; phage(gi30387394) | 2e-26 | Click |
19 | complement(3210517..3210723) | PHAGE_Aeromo_phiO18P: putative zinc finger protein; Dvul_2758; phage(gi148727160) | 3e-09 | Click |
20 | complement(3210732..3211220) | PHAGE_Aeromo_phiO18P: putative tail tube protein; Dvul_2759; phage(gi148727159) | 4e-38 | Click |
21 | complement(3211228..3212337) | PHAGE_Aeromo_phiO18P: putative tail sheath protein; Dvul_2760; phage(gi148727158) | 2e-81 | Click |
22 | complement(3212348..3213034) | PHAGE_Aeromo_phiO18P: putative tail completion protein; Dvul_2761; phage(gi148727157) | 2e-13 | Click |
23 | complement(3213027..3213491) | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_27; Dvul_2762; phage(gi148727156) | 1e-12 | Click |
24 | complement(3213494..3213949) | PHAGE_Aeromo_phiO18P: putative head completion protein; Dvul_2763; phage(gi148727155) | 9e-11 | Click |
25 | complement(3214054..3214788) | PHAGE_Aeromo_phiO18P: putative terminase small subunit; Dvul_2764; phage(gi148727154) | 1e-15 | Click |
26 | complement(3214791..3215816) | PHAGE_Burkho_phiE202: gp2, phage major capsid protein, P2 family; Dvul_2765; phage(gi134288740) | 9e-55 | Click |
27 | complement(3215825..3216673) | PHAGE_Aeromo_phiO18P: putative capsid scaffolding protein; Dvul_2766; phage(gi148727152) | 1e-36 | Click |
28 | 3216821..3218620 | PHAGE_Aeromo_phiO18P: putative terminase large subunit; Dvul_2767; phage(gi148727151) | 7e-133 | Click |
29 | 3218631..3219674 | PHAGE_Aeromo_phiO18P: putative portal protein; Dvul_2768; phage(gi148727149) | 4e-69 | Click |
30 | 3219743..3219985 | PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; Dvul_2769; phage(gi148727148) | 3e-09 | Click |
31 | complement(3220041..3220478) | PHAGE_Bacill_phi105: hypothetical protein phi105_48; Dvul_2770; phage(gi22855041) | 4e-11 | Click |
32 | complement(3220575..3220781) | PHAGE_Haemop_HP2: hypothetical protein HP2p13; Dvul_2771; phage(gi19289355) | 3e-12 | Click |
33 | complement(3220999..3221244) | hypothetical protein; Dvul_2772 | N/A | Click |
34 | complement(3221234..3221500) | hypothetical protein; Dvul_2773 | N/A | Click |
35 | complement(3221497..3221925) | hypothetical protein; Dvul_2774 | N/A | Click |
36 | 3222228..3223205 | PROPHAGE_Escher_Sakai: ATP-dependent metalloprotease; Dvul_2775; phage(gi15833311) | 7e-17 | Click |
37 | 3223218..3225710 | subtilisin-like serine protease; Dvul_2776 | N/A | Click |
38 | complement(3227345..3230068) | PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp40; Dvul_2777; phage(gi17313257) | 4e-130 | Click |
39 | complement(3230245..3230703) | hypothetical protein; Dvul_2778 | N/A | Click |
40 | complement(3230696..3231049) | hypothetical protein; Dvul_2779 | N/A | Click |
41 | 3231137..3231403 | hypothetical protein; Dvul_2780 | N/A | Click |
42 | 3231475..3231735 | hypothetical protein; Dvul_2781 | N/A | Click |
43 | 3231739..3232809 | PHAGE_Lactoc_Tuc2009: integrase; Dvul_2782; phage(gi13487802) | 2e-10 | Click |
44 | 3232892..3232938 | attR GCCTTTTAAGCAGAGAGTCGCAGGTTCGAATCCTGCACGACCCACCA | N/A | Click |