| Definition | Paracoccus denitrificans PD1222 chromosome 2, complete sequence. |
|---|---|
| Accession | NC_008687 |
| Length | 1,730,097 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 17 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(49990..50712) | PHAGE_Roseob_1: ribonuclease III; Pden_2886; phage(gi331028139) | 5e-10 | Click |
| 2 | complement(50705..54595) | PHAGE_Roseob_1: gene transfer agent; Pden_2887; phage(gi331028138) | 0.0 | Click |
| 3 | complement(54614..55039) | PHAGE_Roseob_1: phage cell wall peptidase; Pden_2888; phage(gi331028137) | 4e-31 | Click |
| 4 | complement(55036..55854) | PHAGE_Roseob_1: gene transfer agent; Pden_2889; phage(gi331028136) | 2e-46 | Click |
| 5 | complement(55851..56492) | PHAGE_Roseob_1: putative glycoside hydrolase; Pden_2890; phage(gi331028135) | 2e-45 | Click |
| 6 | complement(56485..57156) | PHAGE_Entero_2009a: putative bacteriophage tail tape measure protein; Pden_2891; phage(gi225220098) | 4e-15 | Click |
| 7 | complement(57181..57393) | hypothetical protein; Pden_2892 | N/A | Click |
| 8 | complement(57390..57707) | hypothetical protein; Pden_2893 | N/A | Click |
| 9 | complement(57709..58122) | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; Pden_2894; phage(gi461474972) | 4e-18 | Click |
| 10 | complement(58135..58554) | hypothetical protein; Pden_2895 | N/A | Click |
| 11 | complement(58551..58901) | head-tail adaptor, putative; Pden_2896 | N/A | Click |
| 12 | complement(58898..59515) | hypothetical protein; Pden_2897 | N/A | Click |
| 13 | complement(59644..60810) | PHAGE_Azospi_Cd: Phage major capsid protein; Pden_2898; phage(gi168495136) | 6e-68 | Click |
| 14 | complement(60834..61391) | PHAGE_Azospi_Cd: phage head maturation protease; Pden_2899; phage(gi168495135) | 4e-26 | Click |
| 15 | complement(61372..61605) | hypothetical protein; Pden_2900 | N/A | Click |
| 16 | complement(61607..62809) | PHAGE_Strept_6: portal protein; Pden_2901; phage(gi93007441) | 9e-22 | Click |
| 17 | complement(62958..64349) | PHAGE_Strept_6: terminase large subunit; Pden_2902; phage(gi93007440) | 1e-66 | Click |
Region 2, total : 17 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 890706..891107 | PHAGE_Entero_Sf6: gene 1 protein; Pden_3755; phage(gi41057279) | 1e-19 | Click |
| 2 | 891208..892533 | PHAGE_Pseudo_AF: putative terminase large subunit; Pden_3756; phage(gi431810294) | 2e-35 | Click |
| 3 | 892594..892848 | hypothetical protein; Pden_3757 | N/A | Click |
| 4 | 892848..896072 | PHAGE_Synech_S_SSM5: hypothetical protein; Pden_3758; phage(gi326784349) | 1e-14 | Click |
| 5 | 896330..898006 | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p04; Pden_3759; phage(gi30387383) | 6e-99 | Click |
| 6 | 898003..898332 | hypothetical protein; Pden_3760 | N/A | Click |
| 7 | 898325..898981 | PHAGE_Entero_epsilon15: putative endoprotease; Pden_3761; phage(gi30387385) | 3e-18 | Click |
| 8 | 898985..900016 | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p07; Pden_3762; phage(gi30387386) | 2e-89 | Click |
| 9 | 900074..900502 | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p08; Pden_3763; phage(gi30387387) | 7e-25 | Click |
| 10 | 900495..900818 | hypothetical protein; Pden_3764 | N/A | Click |
| 11 | 900876..901178 | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p50; Pden_3765; phage(gi117371479) | 9e-26 | Click |
| 12 | 901229..901837 | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p11; Pden_3766; phage(gi30387390) | 9e-17 | Click |
| 13 | 901837..903876 | PHAGE_Bordet_1: Bbp13; Pden_3767; phage(gi41179374) | 9e-129 | Click |
| 14 | 903878..904345 | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p13; Pden_3768; phage(gi30387392) | 2e-12 | Click |
| 15 | 904345..904896 | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p14; Pden_3769; phage(gi30387393) | 1e-13 | Click |
| 16 | 904896..907511 | PHAGE_Caulob_CcrColossus: putative tail tape measure protein; Pden_3770; phage(gi414088174) | 1e-16 | Click |
| 17 | 907529..910828 | PHAGE_Pseudo_LUZ19: internal virion protein; Pden_3771; phage(gi167600483) | 1e-08 | Click |
Region 3, total : 13 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1238878..1241175) | PHAGE_Clostr_st: putative NAD-dependent DNA ligase; Pden_4083; phage(gi80159718) | 1e-66 | Click |
| 2 | 1241110..1241123 | attL CAAGGCCGAGGGCG | N/A | Click |
| 3 | complement(1241333..1241506) | PHAGE_Roseob_1: transcriptional regulator CtrA; Pden_4084; phage(gi331028091) | 1e-07 | Click |
| 4 | complement(1241524..1241892) | hypothetical protein; Pden_4085 | N/A | Click |
| 5 | 1241928..1242326 | hypothetical protein; Pden_4086 | N/A | Click |
| 6 | complement(1242832..1243461) | PHAGE_Brucel_Pr: putative endolysin; Pden_4087; phage(gi418487864) | 9e-39 | Click |
| 7 | complement(1243464..1243733) | PHAGE_Celeri_P12053L: hypothetical protein; Pden_4088; phage(gi399528876) | 2e-06 | Click |
| 8 | complement(1243733..1245883) | PHAGE_Prochl_P_SSM2: fiber; Pden_4089; phage(gi61805905) | 1e-08 | Click |
| 9 | complement(1245880..1246230) | hypothetical protein; Pden_4090 | N/A | Click |
| 10 | complement(1246230..1247267) | hypothetical protein; Pden_4091 | N/A | Click |
| 11 | 1247347..1247706 | hypothetical protein; Pden_4092 | N/A | Click |
| 12 | complement(1247883..1249376) | PHAGE_Brucel_Pr: structural protein; Pden_4093; phage(gi418487861) | 2e-35 | Click |
| 13 | complement(1249366..1250628) | PHAGE_Brucel_Pr: putative peptidoglycan hydrolase; Pden_4094; phage(gi418487860) | 3e-29 | Click |
| 14 | 1250850..1250863 | attR CAAGGCCGAGGGCG | N/A | Click |
| 15 | 1250937..1251944 | PHAGE_Azospi_Cd: integrase; Pden_4095; phage(gi168495175) | 2e-26 | Click |