Definition | Mycobacterium avium 104, complete genome. |
---|---|
Accession | NC_008595 |
Length | 5,475,491 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 64 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 746437..746456 | attL GGACCTGCGGATTAAAAGTC | N/A | Click |
2 | 746939..747421 | PHAGE_Microb_Min1: probable phage-family integrase; MAV_0779; phage(gi149882782) | 2e-23 | Click |
3 | 747462..747791 | hypothetical protein; MAV_0780 | N/A | Click |
4 | 747788..748441 | PHAGE_Ranid__2: ORF123; MAV_0781; phage(gi109638608) | 2e-07 | Click |
5 | complement(748452..748553) | hypothetical protein; MAV_0782 | N/A | Click |
6 | complement(748550..749020) | hypothetical protein; MAV_0783 | N/A | Click |
7 | complement(749056..749328) | hypothetical protein; MAV_0784 | N/A | Click |
8 | complement(749399..749569) | hypothetical protein; MAV_0785 | N/A | Click |
9 | complement(749633..750574) | PHAGE_Mycoba_Omega: gp53; MAV_0786; phage(gi29566790) | 7e-35 | Click |
10 | complement(750571..751947) | PHAGE_Mycoba_Omega: gp50; MAV_0787; phage(gi29566787) | 1e-37 | Click |
11 | complement(751944..752360) | hypothetical protein; MAV_0788 | N/A | Click |
12 | complement(752341..753216) | hypothetical protein; MAV_0789 | N/A | Click |
13 | complement(753228..754160) | PHAGE_Cyanop_S_TIM5: hypothetical protein; MAV_0790; phage(gi422936231) | 1e-05 | Click |
14 | complement(754309..756006) | PHAGE_Mycoba_Faith1: gp22; MAV_0791; phage(gi338827034) | 1e-12 | Click |
15 | complement(756008..756397) | PHAGE_Mycoba_Faith1: gp23; MAV_0792; phage(gi338827035) | 1e-17 | Click |
16 | complement(756408..756839) | PHAGE_Rhodoc_REQ3: hypothetical protein; MAV_0793; phage(gi372450029) | 4e-30 | Click |
17 | complement(756886..758385) | PHAGE_Mycoba_Pacc40: gp20; MAV_0794; phage(gi206600099) | 1e-20 | Click |
18 | complement(758533..758844) | PHAGE_Mycoba_Kostya: gp19; MAV_0795; phage(gi194303072) | 5e-08 | Click |
19 | complement(758848..760443) | PHAGE_Mycoba_Peaches: gp31; MAV_0796; phage(gi282598637) | 1e-20 | Click |
20 | complement(760440..761345) | PHAGE_Mycoba_Omega: gp37; MAV_0797; phage(gi29566774) | 1e-35 | Click |
21 | complement(761342..763078) | PHAGE_Mycoba_Kostya: gp24; MAV_0798; phage(gi194303077) | 3e-116 | Click |
22 | complement(763075..764559) | PHAGE_Mycoba_Cjw1: gp23; MAV_0799; phage(gi29565902) | 5e-52 | Click |
23 | complement(764576..769555) | PHAGE_Mycoba_Kostya: gp22; MAV_0800; phage(gi194303075) | 2e-86 | Click |
24 | complement(769607..770008) | hypothetical protein; MAV_0801 | N/A | Click |
25 | complement(770061..770546) | PHAGE_Mycoba_Omega: gp32; MAV_0802; phage(gi29566769) | 5e-27 | Click |
26 | complement(770634..771680) | PHAGE_Mycoba_Omega: gp31; MAV_0803; phage(gi29566768) | 6e-40 | Click |
27 | complement(771753..772175) | PHAGE_Mycoba_Wee: gp10; MAV_0804; phage(gi318065802) | 4e-05 | Click |
28 | complement(772172..772693) | hypothetical protein; MAV_0805 | N/A | Click |
29 | complement(772788..773225) | hypothetical protein; MAV_0806 | N/A | Click |
30 | complement(773218..773700) | PHAGE_Rhodoc_REQ2: hypothetical protein; MAV_0807; phage(gi372449829) | 2e-09 | Click |
31 | complement(773702..774034) | hypothetical protein; MAV_0808 | N/A | Click |
32 | complement(774034..775071) | PHAGE_Microb_Min1: hypothetical protein MPMin1_gp41; MAV_0809; phage(gi149882822) | 7e-12 | Click |
33 | complement(775180..775578) | PHAGE_Microb_Min1: hypothetical protein MPMin1_gp40; MAV_0810; phage(gi149882821) | 2e-09 | Click |
34 | complement(775580..776845) | PHAGE_Microb_Min1: Clp protease; MAV_0811; phage(gi149882820) | 3e-15 | Click |
35 | complement(776851..778272) | PHAGE_Microb_Min1: hypothetical protein MPMin1_gp38; MAV_0812; phage(gi149882819) | 4e-56 | Click |
36 | complement(778410..779867) | PHAGE_Mycoba_Omega: gp11; MAV_0813; phage(gi29566748) | 2e-56 | Click |
37 | complement(779911..780270) | PHAGE_Mycoba_Omega: gp10; MAV_0814; phage(gi29566747) | 1e-05 | Click |
38 | complement(780481..780702) | PHAGE_Rhodoc_REQ2: hypothetical protein; MAV_0815; phage(gi372449903) | 4e-16 | Click |
39 | complement(780831..781064) | hypothetical protein; MAV_0816 | N/A | Click |
40 | complement(781061..781471) | hypothetical protein; MAV_0817 | N/A | Click |
41 | complement(781461..781871) | PHAGE_Mycoba_Omega: gp4; MAV_0818; phage(gi29566741) | 2e-06 | Click |
42 | complement(782071..782667) | PHAGE_Mycoba_Che9c: gp75; MAV_0819; phage(gi29566181) | 4e-15 | Click |
43 | complement(782667..783032) | hypothetical protein; MAV_0820 | N/A | Click |
44 | complement(783111..783476) | hypothetical protein; MAV_0821 | N/A | Click |
45 | complement(783608..783976) | PHAGE_Mycoba_Pacc40: gp68; MAV_0822; phage(gi206600147) | 8e-39 | Click |
46 | complement(783973..784884) | PHAGE_Mycoba_Che8: gp78; MAV_0823; phage(gi29565844) | 6e-44 | Click |
47 | complement(784884..785099) | PHAGE_Mycoba_Pacc40: gp89; MAV_0824; phage(gi206600168) | 2e-06 | Click |
48 | complement(785156..785281) | hypothetical protein; MAV_0825 | N/A | Click |
49 | complement(785453..785734) | hypothetical protein; MAV_0826 | N/A | Click |
50 | complement(785833..786243) | hypothetical protein; MAV_0827 | N/A | Click |
51 | complement(786286..787950) | PHAGE_Mycoba_Tweety: gp54; MAV_0828; phage(gi157311243) | 8e-35 | Click |
52 | complement(788198..789310) | PHAGE_Mycoba_Brujita: gp49; MAV_0829; phage(gi206599593) | 6e-107 | Click |
53 | complement(789326..790180) | PHAGE_Mycoba_Che9c: gp60; MAV_0830; phage(gi29566166) | 6e-53 | Click |
54 | complement(790173..790301) | hypothetical protein; MAV_0831 | N/A | Click |
55 | complement(790298..790558) | PHAGE_Rhodoc_REQ3: hypothetical protein; MAV_0832; phage(gi372449984) | 3e-09 | Click |
56 | 790604..790762 | hypothetical protein; MAV_0833 | N/A | Click |
57 | complement(790940..791188) | hypothetical protein; MAV_0834 | N/A | Click |
58 | complement(791318..791605) | hypothetical protein; MAV_0835 | N/A | Click |
59 | complement(791602..791754) | hypothetical protein; MAV_0836 | N/A | Click |
60 | complement(791751..792539) | PHAGE_Mycoba_Brujita: gp36; MAV_0837; phage(gi206599580) | 8e-84 | Click |
61 | complement(792536..792646) | hypothetical protein; MAV_0838 | N/A | Click |
62 | complement(792643..793434) | PHAGE_Mycoba_Brujita: gp36; MAV_0839; phage(gi206599580) | 3e-67 | Click |
63 | 793512..793724 | hypothetical protein; MAV_0840 | N/A | Click |
64 | complement(793769..794035) | excisionase family protein DNA binding protein; MAV_0841 | N/A | Click |
65 | complement(794402..794474) | tRNA | N/A | Click |
66 | 794426..794445 | attR GGACCTGCGGATTAAAAGTC | N/A | Click |
67 | 794599..794671 | tRNA | N/A | Click |
68 | 794701..794778 | tRNA | N/A | Click |
69 | 794805..794881 | tRNA | N/A | Click |
70 | complement(794921..795760) | PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; MAV_0846; phage(gi116326757) | 4e-09 | Click |
Region 2, total : 23 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1178359..1179465) | PHAGE_Human__4: LF3; MAV_1231; phage(gi82503263) | 1e-08 | Click |
2 | 1179704..1180756 | GTP-dependent nucleic acid-binding protein EngD; MAV_1232 | N/A | Click |
3 | 1180947..1181222 | PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; MAV_1233; phage(gi17975201) | 4e-14 | Click |
4 | 1182242..1183516 | PROPHAGE_Escher_CFT073: transposase; MAV_1235; phage(gi26246249) | 1e-38 | Click |
5 | 1183823..1184032 | PHAGE_Mycoba_Tweety: gp75; MAV_1236; phage(gi157311264) | 1e-07 | Click |
6 | complement(1184295..1185599) | PROPHAGE_Shewan_MR-1: ISSod5, transposase; MAV_1237; phage(gi24373965) | 2e-23 | Click |
7 | complement(1185708..1186970) | PROPHAGE_Escher_CFT073: transposase; MAV_1238; phage(gi26246249) | 8e-37 | Click |
8 | 1187107..1187313 | hypothetical protein; MAV_1239 | N/A | Click |
9 | 1187300..1187671 | PilT domain-containing protein; MAV_1240 | N/A | Click |
10 | 1187804..1188211 | hypothetical protein; MAV_1241 | N/A | Click |
11 | complement(1188277..1189014) | PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; MAV_1242; phage(gi116326757) | 2e-23 | Click |
12 | 1189110..1189715 | transcriptional regulator; MAV_1243 | N/A | Click |
13 | 1189817..1190215 | glyoxalase family protein; MAV_1244 | N/A | Click |
14 | 1190284..1190667 | PHAGE_Prochl_P_SSM2: phage tail fiber-like protein; MAV_1245; phage(gi61805895) | 3e-05 | Click |
15 | 1190737..1191069 | PHAGE_Xantho_CP2: hypothetical protein; MAV_1246; phage(gi448245209) | 9e-05 | Click |
16 | 1191364..1191774 | PHAGE_Emilia_86: hypothetical protein EhV204; MAV_1247; phage(gi73852674) | 2e-13 | Click |
17 | 1192185..1192508 | antibiotic biosynthesis monooxygenase; MAV_1248 | N/A | Click |
18 | complement(1192513..1193196) | hypothetical protein; MAV_1249 | N/A | Click |
19 | 1193323..1193511 | hypothetical protein; MAV_1251 | N/A | Click |
20 | complement(1193469..1194287) | PHAGE_Megavi_lba: putative serine/threonine-protein kinase/receptor; MAV_1250; phage(gi448826028) | 2e-05 | Click |
21 | 1194419..1195828 | PHAGE_Cyanop_S_TIM5: glucose 6-phosphate dehydrogenase; MAV_1252; phage(gi422936209) | 7e-64 | Click |
22 | 1195845..1196867 | PHAGE_Cyanop_S_SSM4: 6-phosphogluconate dehydrogenase; MAV_1253; phage(gi472343404) | 3e-94 | Click |
23 | complement(1196881..1197714) | PHAGE_Mycoba_Pukovnik: gp62; MAV_1254; phage(gi192824238) | 1e-07 | Click |
Region 3, total : 24 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1429012..1429023 | attL GTCGACCAGGCC | N/A | Click |
2 | complement(1434891..1436165) | PROPHAGE_Escher_CFT073: transposase; MAV_1468; phage(gi26246249) | 1e-37 | Click |
3 | complement(1436159..1436440) | hypothetical protein; MAV_1469 | N/A | Click |
4 | 1436539..1436796 | transposase; MAV_1471 | N/A | Click |
5 | complement(1436786..1438138) | PHAGE_Clostr_st: putative IS transposase (OrfB); MAV_1470; phage(gi80159867) | 3e-17 | Click |
6 | 1438215..1438565 | PROPHAGE_Escher_Sakai: putative transposase; MAV_1472; phage(gi15834436) | 3e-17 | Click |
7 | complement(1438578..1439495) | PROPHAGE_Xantho_306: transposase; MAV_1473; phage(gi21243165) | 2e-75 | Click |
8 | complement(1439495..1439770) | PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; MAV_1474; phage(gi17975201) | 4e-14 | Click |
9 | complement(1440784..1440978) | transposase; MAV_1476 | N/A | Click |
10 | 1440992..1441171 | hypothetical protein; MAV_1477 | N/A | Click |
11 | complement(1441979..1442449) | hypothetical protein; MAV_1478 | N/A | Click |
12 | complement(1442413..1443501) | PHAGE_Cardio_polyomavirus: major structural protein VP1; MAV_1479; phage(gi440285304) | 2e-09 | Click |
13 | complement(1443501..1443794) | hypothetical protein; MAV_1480 | N/A | Click |
14 | complement(1444205..1445401) | TnpC protein; MAV_1481 | N/A | Click |
15 | 1445452..1446777 | PROPHAGE_Escher_CFT073: transposase; MAV_1482; phage(gi26246249) | 2e-35 | Click |
16 | complement(1446797..1446976) | hypothetical protein; MAV_1483 | N/A | Click |
17 | 1447189..1448295 | PHAGE_Mycoba_SWU1: integrase; MAV_1484; phage(gi388570553) | 4e-61 | Click |
18 | 1448472..1448696 | hypothetical protein; MAV_1485 | N/A | Click |
19 | 1448829..1450232 | PHAGE_Mycoba_Phlyer: gp56; MAV_1486; phage(gi222435726) | 7e-93 | Click |
20 | 1450253..1451377 | PHAGE_Mycoba_Corndog: gp22; MAV_1487; phage(gi29566306) | 5e-05 | Click |
21 | 1451590..1451748 | hypothetical protein; MAV_1488 | N/A | Click |
22 | 1451753..1452253 | hypothetical protein; MAV_1489 | N/A | Click |
23 | 1452250..1452720 | flagellar hook-length control protein; MAV_1490 | N/A | Click |
24 | 1452717..1452869 | hypothetical protein; MAV_1491 | N/A | Click |
25 | 1452897..1453601 | PHAGE_Staphy_TEM123: integrase; MAV_1493; phage(gi388570325) | 2e-16 | Click |
26 | 1464399..1464410 | attR GTCGACCAGGCC | N/A | Click |
Region 4, total : 13 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(2934861..2935172) | PHAGE_Mycoba_Llij: gp52; MAV_2904; phage(gi109392238) | 2e-09 | Click |
2 | complement(2935178..2936563) | PHAGE_Roseob_SIO1: gp7; MAV_2905; phage(gi9964615) | 3e-08 | Click |
3 | complement(2936601..2937845) | PHAGE_Pectob_My1: YadA domain-containing protein; MAV_2906; phage(gi410491156) | 2e-12 | Click |
4 | complement(2938141..2938449) | hypothetical protein; MAV_2907 | N/A | Click |
5 | complement(2938539..2938877) | PHAGE_Mycoba_Llij: gp52; MAV_2908; phage(gi109392238) | 8e-06 | Click |
6 | complement(2938912..2940315) | PHAGE_Pectob_My1: YadA domain-containing protein; MAV_2909; phage(gi410491156) | 5e-09 | Click |
7 | complement(2940393..2941652) | PHAGE_Celeri_P12053L: putative phage tail fiber protein; MAV_2910; phage(gi399528893) | 4e-09 | Click |
8 | complement(2942538..2943812) | PROPHAGE_Escher_CFT073: transposase; MAV_2911; phage(gi26246249) | 1e-38 | Click |
9 | complement(2944028..2944363) | PHAGE_Mycoba_Llij: gp52; MAV_2912; phage(gi109392238) | 3e-10 | Click |
10 | complement(2944381..2945595) | PHAGE_Roseob_SIO1: gp7; MAV_2913; phage(gi9964615) | 6e-08 | Click |
11 | complement(2945615..2946745) | PHAGE_Cyprin_1: membrane protein ORF65; MAV_2914; phage(gi422933603) | 2e-09 | Click |
12 | complement(2946764..2947063) | PE family protein; MAV_2915 | N/A | Click |
13 | complement(2947613..2949403) | PHAGE_Cafete_BV_PW1: putative AAA+ superfamily ATPase; MAV_2916; phage(gi310831096) | 5e-14 | Click |