Definition Mycobacterium avium 104, complete genome.
Accession NC_008595
Length 5,475,491
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 64 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 746437..746456  attL    GGACCTGCGGATTAAAAGTC  N/A  Click
2 746939..747421  PHAGE_Microb_Min1: probable phage-family integrase; MAV_0779; phage(gi149882782)  2e-23  Click
3 747462..747791  hypothetical protein; MAV_0780  N/A  Click
4 747788..748441  PHAGE_Ranid__2: ORF123; MAV_0781; phage(gi109638608)  2e-07  Click
5 complement(748452..748553)  hypothetical protein; MAV_0782  N/A  Click
6 complement(748550..749020)  hypothetical protein; MAV_0783  N/A  Click
7 complement(749056..749328)  hypothetical protein; MAV_0784  N/A  Click
8 complement(749399..749569)  hypothetical protein; MAV_0785  N/A  Click
9 complement(749633..750574)  PHAGE_Mycoba_Omega: gp53; MAV_0786; phage(gi29566790)  7e-35  Click
10 complement(750571..751947)  PHAGE_Mycoba_Omega: gp50; MAV_0787; phage(gi29566787)  1e-37  Click
11 complement(751944..752360)  hypothetical protein; MAV_0788  N/A  Click
12 complement(752341..753216)  hypothetical protein; MAV_0789  N/A  Click
13 complement(753228..754160)  PHAGE_Cyanop_S_TIM5: hypothetical protein; MAV_0790; phage(gi422936231)  1e-05  Click
14 complement(754309..756006)  PHAGE_Mycoba_Faith1: gp22; MAV_0791; phage(gi338827034)  1e-12  Click
15 complement(756008..756397)  PHAGE_Mycoba_Faith1: gp23; MAV_0792; phage(gi338827035)  1e-17  Click
16 complement(756408..756839)  PHAGE_Rhodoc_REQ3: hypothetical protein; MAV_0793; phage(gi372450029)  4e-30  Click
17 complement(756886..758385)  PHAGE_Mycoba_Pacc40: gp20; MAV_0794; phage(gi206600099)  1e-20  Click
18 complement(758533..758844)  PHAGE_Mycoba_Kostya: gp19; MAV_0795; phage(gi194303072)  5e-08  Click
19 complement(758848..760443)  PHAGE_Mycoba_Peaches: gp31; MAV_0796; phage(gi282598637)  1e-20  Click
20 complement(760440..761345)  PHAGE_Mycoba_Omega: gp37; MAV_0797; phage(gi29566774)  1e-35  Click
21 complement(761342..763078)  PHAGE_Mycoba_Kostya: gp24; MAV_0798; phage(gi194303077)  3e-116  Click
22 complement(763075..764559)  PHAGE_Mycoba_Cjw1: gp23; MAV_0799; phage(gi29565902)  5e-52  Click
23 complement(764576..769555)  PHAGE_Mycoba_Kostya: gp22; MAV_0800; phage(gi194303075)  2e-86  Click
24 complement(769607..770008)  hypothetical protein; MAV_0801  N/A  Click
25 complement(770061..770546)  PHAGE_Mycoba_Omega: gp32; MAV_0802; phage(gi29566769)  5e-27  Click
26 complement(770634..771680)  PHAGE_Mycoba_Omega: gp31; MAV_0803; phage(gi29566768)  6e-40  Click
27 complement(771753..772175)  PHAGE_Mycoba_Wee: gp10; MAV_0804; phage(gi318065802)  4e-05  Click
28 complement(772172..772693)  hypothetical protein; MAV_0805  N/A  Click
29 complement(772788..773225)  hypothetical protein; MAV_0806  N/A  Click
30 complement(773218..773700)  PHAGE_Rhodoc_REQ2: hypothetical protein; MAV_0807; phage(gi372449829)  2e-09  Click
31 complement(773702..774034)  hypothetical protein; MAV_0808  N/A  Click
32 complement(774034..775071)  PHAGE_Microb_Min1: hypothetical protein MPMin1_gp41; MAV_0809; phage(gi149882822)  7e-12  Click
33 complement(775180..775578)  PHAGE_Microb_Min1: hypothetical protein MPMin1_gp40; MAV_0810; phage(gi149882821)  2e-09  Click
34 complement(775580..776845)  PHAGE_Microb_Min1: Clp protease; MAV_0811; phage(gi149882820)  3e-15  Click
35 complement(776851..778272)  PHAGE_Microb_Min1: hypothetical protein MPMin1_gp38; MAV_0812; phage(gi149882819)  4e-56  Click
36 complement(778410..779867)  PHAGE_Mycoba_Omega: gp11; MAV_0813; phage(gi29566748)  2e-56  Click
37 complement(779911..780270)  PHAGE_Mycoba_Omega: gp10; MAV_0814; phage(gi29566747)  1e-05  Click
38 complement(780481..780702)  PHAGE_Rhodoc_REQ2: hypothetical protein; MAV_0815; phage(gi372449903)  4e-16  Click
39 complement(780831..781064)  hypothetical protein; MAV_0816  N/A  Click
40 complement(781061..781471)  hypothetical protein; MAV_0817  N/A  Click
41 complement(781461..781871)  PHAGE_Mycoba_Omega: gp4; MAV_0818; phage(gi29566741)  2e-06  Click
42 complement(782071..782667)  PHAGE_Mycoba_Che9c: gp75; MAV_0819; phage(gi29566181)  4e-15  Click
43 complement(782667..783032)  hypothetical protein; MAV_0820  N/A  Click
44 complement(783111..783476)  hypothetical protein; MAV_0821  N/A  Click
45 complement(783608..783976)  PHAGE_Mycoba_Pacc40: gp68; MAV_0822; phage(gi206600147)  8e-39  Click
46 complement(783973..784884)  PHAGE_Mycoba_Che8: gp78; MAV_0823; phage(gi29565844)  6e-44  Click
47 complement(784884..785099)  PHAGE_Mycoba_Pacc40: gp89; MAV_0824; phage(gi206600168)  2e-06  Click
48 complement(785156..785281)  hypothetical protein; MAV_0825  N/A  Click
49 complement(785453..785734)  hypothetical protein; MAV_0826  N/A  Click
50 complement(785833..786243)  hypothetical protein; MAV_0827  N/A  Click
51 complement(786286..787950)  PHAGE_Mycoba_Tweety: gp54; MAV_0828; phage(gi157311243)  8e-35  Click
52 complement(788198..789310)  PHAGE_Mycoba_Brujita: gp49; MAV_0829; phage(gi206599593)  6e-107  Click
53 complement(789326..790180)  PHAGE_Mycoba_Che9c: gp60; MAV_0830; phage(gi29566166)  6e-53  Click
54 complement(790173..790301)  hypothetical protein; MAV_0831  N/A  Click
55 complement(790298..790558)  PHAGE_Rhodoc_REQ3: hypothetical protein; MAV_0832; phage(gi372449984)  3e-09  Click
56 790604..790762  hypothetical protein; MAV_0833  N/A  Click
57 complement(790940..791188)  hypothetical protein; MAV_0834  N/A  Click
58 complement(791318..791605)  hypothetical protein; MAV_0835  N/A  Click
59 complement(791602..791754)  hypothetical protein; MAV_0836  N/A  Click
60 complement(791751..792539)  PHAGE_Mycoba_Brujita: gp36; MAV_0837; phage(gi206599580)  8e-84  Click
61 complement(792536..792646)  hypothetical protein; MAV_0838  N/A  Click
62 complement(792643..793434)  PHAGE_Mycoba_Brujita: gp36; MAV_0839; phage(gi206599580)  3e-67  Click
63 793512..793724  hypothetical protein; MAV_0840  N/A  Click
64 complement(793769..794035)  excisionase family protein DNA binding protein; MAV_0841  N/A  Click
65 complement(794402..794474)  tRNA  N/A  Click
66 794426..794445  attR    GGACCTGCGGATTAAAAGTC  N/A  Click
67 794599..794671  tRNA  N/A  Click
68 794701..794778  tRNA  N/A  Click
69 794805..794881  tRNA  N/A  Click
70 complement(794921..795760)  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; MAV_0846; phage(gi116326757)  4e-09  Click
Region 2, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1178359..1179465)  PHAGE_Human__4: LF3; MAV_1231; phage(gi82503263)  1e-08  Click
2 1179704..1180756  GTP-dependent nucleic acid-binding protein EngD; MAV_1232  N/A  Click
3 1180947..1181222  PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; MAV_1233; phage(gi17975201)  4e-14  Click
4 1182242..1183516  PROPHAGE_Escher_CFT073: transposase; MAV_1235; phage(gi26246249)  1e-38  Click
5 1183823..1184032  PHAGE_Mycoba_Tweety: gp75; MAV_1236; phage(gi157311264)  1e-07  Click
6 complement(1184295..1185599)  PROPHAGE_Shewan_MR-1: ISSod5, transposase; MAV_1237; phage(gi24373965)  2e-23  Click
7 complement(1185708..1186970)  PROPHAGE_Escher_CFT073: transposase; MAV_1238; phage(gi26246249)  8e-37  Click
8 1187107..1187313  hypothetical protein; MAV_1239  N/A  Click
9 1187300..1187671  PilT domain-containing protein; MAV_1240  N/A  Click
10 1187804..1188211  hypothetical protein; MAV_1241  N/A  Click
11 complement(1188277..1189014)  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; MAV_1242; phage(gi116326757)  2e-23  Click
12 1189110..1189715  transcriptional regulator; MAV_1243  N/A  Click
13 1189817..1190215  glyoxalase family protein; MAV_1244  N/A  Click
14 1190284..1190667  PHAGE_Prochl_P_SSM2: phage tail fiber-like protein; MAV_1245; phage(gi61805895)  3e-05  Click
15 1190737..1191069  PHAGE_Xantho_CP2: hypothetical protein; MAV_1246; phage(gi448245209)  9e-05  Click
16 1191364..1191774  PHAGE_Emilia_86: hypothetical protein EhV204; MAV_1247; phage(gi73852674)  2e-13  Click
17 1192185..1192508  antibiotic biosynthesis monooxygenase; MAV_1248  N/A  Click
18 complement(1192513..1193196)  hypothetical protein; MAV_1249  N/A  Click
19 1193323..1193511  hypothetical protein; MAV_1251  N/A  Click
20 complement(1193469..1194287)  PHAGE_Megavi_lba: putative serine/threonine-protein kinase/receptor; MAV_1250; phage(gi448826028)  2e-05  Click
21 1194419..1195828  PHAGE_Cyanop_S_TIM5: glucose 6-phosphate dehydrogenase; MAV_1252; phage(gi422936209)  7e-64  Click
22 1195845..1196867  PHAGE_Cyanop_S_SSM4: 6-phosphogluconate dehydrogenase; MAV_1253; phage(gi472343404)  3e-94  Click
23 complement(1196881..1197714)  PHAGE_Mycoba_Pukovnik: gp62; MAV_1254; phage(gi192824238)  1e-07  Click
Region 3, total : 24 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1429012..1429023  attL    GTCGACCAGGCC  N/A  Click
2 complement(1434891..1436165)  PROPHAGE_Escher_CFT073: transposase; MAV_1468; phage(gi26246249)  1e-37  Click
3 complement(1436159..1436440)  hypothetical protein; MAV_1469  N/A  Click
4 1436539..1436796  transposase; MAV_1471  N/A  Click
5 complement(1436786..1438138)  PHAGE_Clostr_st: putative IS transposase (OrfB); MAV_1470; phage(gi80159867)  3e-17  Click
6 1438215..1438565  PROPHAGE_Escher_Sakai: putative transposase; MAV_1472; phage(gi15834436)  3e-17  Click
7 complement(1438578..1439495)  PROPHAGE_Xantho_306: transposase; MAV_1473; phage(gi21243165)  2e-75  Click
8 complement(1439495..1439770)  PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; MAV_1474; phage(gi17975201)  4e-14  Click
9 complement(1440784..1440978)  transposase; MAV_1476  N/A  Click
10 1440992..1441171  hypothetical protein; MAV_1477  N/A  Click
11 complement(1441979..1442449)  hypothetical protein; MAV_1478  N/A  Click
12 complement(1442413..1443501)  PHAGE_Cardio_polyomavirus: major structural protein VP1; MAV_1479; phage(gi440285304)  2e-09  Click
13 complement(1443501..1443794)  hypothetical protein; MAV_1480  N/A  Click
14 complement(1444205..1445401)  TnpC protein; MAV_1481  N/A  Click
15 1445452..1446777  PROPHAGE_Escher_CFT073: transposase; MAV_1482; phage(gi26246249)  2e-35  Click
16 complement(1446797..1446976)  hypothetical protein; MAV_1483  N/A  Click
17 1447189..1448295  PHAGE_Mycoba_SWU1: integrase; MAV_1484; phage(gi388570553)  4e-61  Click
18 1448472..1448696  hypothetical protein; MAV_1485  N/A  Click
19 1448829..1450232  PHAGE_Mycoba_Phlyer: gp56; MAV_1486; phage(gi222435726)  7e-93  Click
20 1450253..1451377  PHAGE_Mycoba_Corndog: gp22; MAV_1487; phage(gi29566306)  5e-05  Click
21 1451590..1451748  hypothetical protein; MAV_1488  N/A  Click
22 1451753..1452253  hypothetical protein; MAV_1489  N/A  Click
23 1452250..1452720  flagellar hook-length control protein; MAV_1490  N/A  Click
24 1452717..1452869  hypothetical protein; MAV_1491  N/A  Click
25 1452897..1453601  PHAGE_Staphy_TEM123: integrase; MAV_1493; phage(gi388570325)  2e-16  Click
26 1464399..1464410  attR    GTCGACCAGGCC  N/A  Click
Region 4, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2934861..2935172)  PHAGE_Mycoba_Llij: gp52; MAV_2904; phage(gi109392238)  2e-09  Click
2 complement(2935178..2936563)  PHAGE_Roseob_SIO1: gp7; MAV_2905; phage(gi9964615)  3e-08  Click
3 complement(2936601..2937845)  PHAGE_Pectob_My1: YadA domain-containing protein; MAV_2906; phage(gi410491156)  2e-12  Click
4 complement(2938141..2938449)  hypothetical protein; MAV_2907  N/A  Click
5 complement(2938539..2938877)  PHAGE_Mycoba_Llij: gp52; MAV_2908; phage(gi109392238)  8e-06  Click
6 complement(2938912..2940315)  PHAGE_Pectob_My1: YadA domain-containing protein; MAV_2909; phage(gi410491156)  5e-09  Click
7 complement(2940393..2941652)  PHAGE_Celeri_P12053L: putative phage tail fiber protein; MAV_2910; phage(gi399528893)  4e-09  Click
8 complement(2942538..2943812)  PROPHAGE_Escher_CFT073: transposase; MAV_2911; phage(gi26246249)  1e-38  Click
9 complement(2944028..2944363)  PHAGE_Mycoba_Llij: gp52; MAV_2912; phage(gi109392238)  3e-10  Click
10 complement(2944381..2945595)  PHAGE_Roseob_SIO1: gp7; MAV_2913; phage(gi9964615)  6e-08  Click
11 complement(2945615..2946745)  PHAGE_Cyprin_1: membrane protein ORF65; MAV_2914; phage(gi422933603)  2e-09  Click
12 complement(2946764..2947063)  PE family protein; MAV_2915  N/A  Click
13 complement(2947613..2949403)  PHAGE_Cafete_BV_PW1: putative AAA+ superfamily ATPase; MAV_2916; phage(gi310831096)  5e-14  Click