Definition Clostridium novyi NT, complete genome.
Accession NC_008593
Length 2,547,720
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 7 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(626466..627905)  PHAGE_Staphy_phiPVL108: putative transposase; NT01CX_1460; phage(gi119443708)  4e-22  Click
2 628245..629015  sugar metabolism transcriptional regulator; NT01CX_1461  N/A  Click
3 629053..630174  PHAGE_Bathyc_BpV1: hypothetical protein; NT01CX_1462; phage(gi313768026)  3e-45  Click
4 630286..631479  PHAGE_Ostreo_1: hypothetical protein H665_p041; NT01CX_1463; phage(gi260665911)  4e-20  Click
5 631661..632911  PHAGE_Melano_entomopoxvirus: ORF MSV128 hypothetical protein; NT01CX_1464; phage(gi9631482)  8e-05  Click
6 633213..633911  PHAGE_Feldma_virus: putative sensor histidine kinase; NT01CX_1465; phage(gi197322366)  1e-10  Click
7 633883..636024  PHAGE_Ectoca_1: EsV-1-65; NT01CX_1466; phage(gi13242537)  2e-11  Click
Region 2, total : 51 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1364588..1365676)  PHAGE_Microm_12T: ATP-dependent metalloprotease FtsH; NT01CX_2156; phage(gi472342809)  7e-20  Click
2 complement(1365917..1367212)  PHAGE_Clostr_st: putative N-acetylmuramoyl-L-alanine amidase; NT01CX_2157; phage(gi80159794)  5e-55  Click
3 complement(1367251..1367511)  PHAGE_Clostr_phi8074_B1: hypothetical protein; NT01CX_2158; phage(gi431810381)  3e-06  Click
4 complement(1367575..1369386)  PHAGE_Clostr_phiCD38_2: tail protein/endopeptidase; NT01CX_2159; phage(gi333798125)  3e-37  Click
5 complement(1369470..1369604)  Gp17 protein-related protein; NT01CX_2160  N/A  Click
6 complement(1369597..1369932)  hypothetical protein; NT01CX_2161  N/A  Click
7 complement(1369943..1371787)  PHAGE_Clostr_O: pre-neck/exonuclease; NT01CX_2162; phage(gi208429870)  4e-33  Click
8 complement(1371778..1372461)  PHAGE_Clostr_phiCD38_2: tail component protein; NT01CX_2163; phage(gi333798124)  3e-20  Click
9 complement(1372464..1375013)  PHAGE_Staphy_3: tail length tape measure protein; NT01CX_2164; phage(gi156604065)  9e-105  Click
10 complement(1375026..1375253)  peptide methionine sulfoxide reductase domain-containing protein; NT01CX_2165  N/A  Click
11 complement(1375319..1375696)  PHAGE_Entero_phiFL4A: hypothetical protein; NT01CX_2166; phage(gi281416480)  3e-14  Click
12 complement(1375713..1375970)  hypothetical protein; NT01CX_2167  N/A  Click
13 complement(1376020..1376649)  PHAGE_Entero_phiFL4A: hypothetical protein; NT01CX_2168; phage(gi281416479)  5e-39  Click
14 complement(1376651..1377019)  PHAGE_Entero_phiFL4A: hypothetical protein; NT01CX_2169; phage(gi281416478)  3e-16  Click
15 complement(1377024..1377422)  PHAGE_Entero_phiFL4A: hypothetical protein; NT01CX_2170; phage(gi281416477)  4e-24  Click
16 complement(1377415..1377744)  PHAGE_Entero_phiFL4A: hypothetical protein; NT01CX_2171; phage(gi281416476)  6e-15  Click
17 complement(1377744..1378298)  PHAGE_Entero_phiFL4A: hypothetical protein; NT01CX_2172; phage(gi281416475)  6e-28  Click
18 complement(1378344..1379036)  PHAGE_Deep_s_D6E: capsid protein; NT01CX_2173; phage(gi423262332)  2e-50  Click
19 complement(1379197..1379793)  PHAGE_Entero_phiFL4A: scaffold protein; NT01CX_2174; phage(gi281416472)  2e-24  Click
20 complement(1379911..1380420)  PHAGE_Clostr_phiC2: hypothetical protein phiC2p19; NT01CX_2175; phage(gi134287354)  2e-14  Click
21 complement(1380512..1380736)  hypothetical protein; NT01CX_2176  N/A  Click
22 complement(1380741..1382012)  PHAGE_Entero_phiFL4A: phage head protein; NT01CX_2177; phage(gi281416469)  1e-57  Click
23 complement(1381999..1383462)  PHAGE_Entero_phiFL4A: portal protein; NT01CX_2178; phage(gi281416468)  2e-139  Click
24 complement(1383466..1384725)  PHAGE_Clostr_O: large terminase; NT01CX_2179; phage(gi208429857)  4e-106  Click
25 complement(1384718..1385179)  PHAGE_Strept_6: putative terminase small subunit; NT01CX_2180; phage(gi28876466)  2e-34  Click
26 complement(1385874..1386314)  PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp73; NT01CX_2181; phage(gi90592709)  1e-12  Click
27 complement(1386393..1387205)  PHAGE_Emilia_86: hypothetical protein EhV367; NT01CX_2182; phage(gi73852841)  2e-05  Click
28 complement(1387216..1387737)  hypothetical protein; NT01CX_2183  N/A  Click
29 complement(1388042..1388191)  hypothetical protein; NT01CX_2184  N/A  Click
30 complement(1388284..1389048)  hypothetical protein; NT01CX_2185  N/A  Click
31 complement(1389051..1389602)  PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp55; NT01CX_2186; phage(gi304360717)  1e-20  Click
32 complement(1389679..1389876)  hypothetical protein; NT01CX_2187  N/A  Click
33 complement(1389892..1389999)  hypothetical protein; NT01CX_2188  N/A  Click
34 complement(1390031..1390219)  hypothetical protein; NT01CX_2189  N/A  Click
35 complement(1390226..1391128)  PHAGE_Lister_A118: gp49; NT01CX_2190; phage(gi16798836)  1e-38  Click
36 complement(1391138..1391329)  hypothetical protein; NT01CX_2191  N/A  Click
37 complement(1391340..1391936)  PHAGE_Clostr_phiMMP02: putative essential recombination function protein; NT01CX_2192; phage(gi414090421)  7e-54  Click
38 complement(1391948..1392481)  PHAGE_Staphy_phi5967PVL: hypothetical protein; NT01CX_2193; phage(gi431810255)  3e-23  Click
39 complement(1392529..1392810)  hypothetical protein; NT01CX_2194  N/A  Click
40 complement(1392825..1393016)  hypothetical protein; NT01CX_2195  N/A  Click
41 complement(1393029..1393184)  hypothetical protein; NT01CX_2196  N/A  Click
42 complement(1393200..1393916)  PHAGE_Entero_phiFL3A: anti-repressor protein; NT01CX_2197; phage(gi281416221)  3e-22  Click
43 complement(1394025..1394162)  hypothetical protein; NT01CX_2198  N/A  Click
44 complement(1394174..1394962)  PHAGE_Staphy_phiETA: similar to phage phi PVL antirepressor; NT01CX_2199; phage(gi17426239)  3e-93  Click
45 complement(1394959..1395174)  PHAGE_Bacill_IEBH: helix-turn-helix domain protein; NT01CX_2200; phage(gi197261594)  1e-05  Click
46 1395378..1395719  PHAGE_Lactob_Lj965: putative repressor; NT01CX_2201; phage(gi41179224)  5e-09  Click
47 1395703..1396785  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp05; NT01CX_2202; phage(gi122891789)  6e-08  Click
48 1396966..1398561  PHAGE_Strept_phiNJ2: putative recombinase; NT01CX_2203; phage(gi414090258)  2e-37  Click
49 complement(1398533..1399576)  PROPHAGE_Escher_Sakai: putative ATP-dependent protease; NT01CX_2204; phage(gi15833954)  3e-83  Click
50 1399772..1400134  hypothetical protein; NT01CX_2205  N/A  Click
51 complement(1400194..1401003)  PHAGE_Cafete_BV_PW1: putative ribonuclease HII; NT01CX_2206; phage(gi310831397)  1e-19  Click
Region 3, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2510752..2510765  attL    TGAAAATATATTAA  N/A  Click
2 complement(2512289..2514112)  PHAGE_Acanth_1: hypothetical protein ATCV1_Z077L; NT01CX_0833; phage(gi155371024)  2e-18  Click
3 complement(2514695..2515999)  PHAGE_Staphy_TEM123: phage terminase large subunit; NT01CX_0834; phage(gi388570349)  2e-98  Click
4 complement(2515992..2516360)  PHAGE_Lactob_KC5a: putative phage terminase small subunit; NT01CX_0835; phage(gi90592609)  4e-09  Click
5 complement(2516435..2517322)  PHAGE_Staphy_TEM123: major head protein; NT01CX_0836; phage(gi388570345)  1e-24  Click
6 complement(2517322..2517690)  hypothetical protein; NT01CX_0837  N/A  Click
7 complement(2517709..2518248)  PHAGE_Bacill_phi105: hypothetical protein phi105_44; NT01CX_0838; phage(gi22855037)  1e-36  Click
8 complement(2518261..2518569)  hypothetical protein; NT01CX_0839  N/A  Click
9 complement(2518666..2520840)  PHAGE_Strept_YMC_2011: putative primase; NT01CX_0840; phage(gi399498703)  4e-19  Click
10 2521273..2521716  PHAGE_Bacill_phi105: immunity repressor; NT01CX_0841; phage(gi22855027)  9e-08  Click
11 2521497..2521510  attR    TGAAAATATATTAA  N/A  Click
12 2521780..2521884  hypothetical protein; NT01CX_0842  N/A  Click
13 2521851..2523014  PHAGE_Clostr_phiC2: putative integrase; NT01CX_0843; phage(gi134287379)  1e-33  Click