Definition | Escherichia coli APEC O1, complete genome. |
---|---|
Accession | NC_008563 |
Length | 5,082,025 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 7 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 298716..298727 | attL TAATTAGTGAAG | N/A | Click |
2 | 301931..302959 | PHAGE_Pseudo_vB_PaeM_C2_10_Ab1: Major capsid protein; APECO1_1718; phage(gi431809985) | 5e-10 | Click |
3 | 303266..305095 | PHAGE_Entero_SPC35: pore-forming tail tip protein; APECO1_1717; phage(gi326633022) | 7e-05 | Click |
4 | 305130..305843 | PHAGE_Escher_phAPEC8: hypothetical protein; APECO1_1716; phage(gi448260431) | 4e-61 | Click |
5 | complement(305925..307259) | PHAGE_Helico_phiHP33: integrase/recombinase; APECO1_1715; phage(gi371671343) | 9e-07 | Click |
6 | complement(307569..307961) | integrase; APECO1_1714 | N/A | Click |
7 | complement(308292..308816) | hypothetical protein; APECO1_1713 | N/A | Click |
8 | complement(308942..313072) | PHAGE_Synech_metaG_MbCM1: phage tail fiber-like protein; APECO1_1712; phage(gi418487249) | 1e-08 | Click |
9 | 316507..316518 | attR TAATTAGTGAAG | N/A | Click |
Region 2, total : 39 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(918973..919770) | PHAGE_Entero_T4: NrdG anaerobic NTP reductase, small subunit; APECO1_1190; phage(gi9632803) | 6e-07 | Click |
2 | 919699..919711 | attL ACCAATAACTGAC | N/A | Click |
3 | complement(919802..920797) | PHAGE_Yersin_413C: Int; APECO1_1189; phage(gi30065733) | 1e-101 | Click |
4 | complement(920891..921202) | PHAGE_Yersin_413C: gpC; APECO1_1188; phage(gi30065734) | 5e-13 | Click |
5 | 921307..921663 | PHAGE_Entero_P2: Cox; APECO1_4460; phage(gi9630359) | 9e-05 | Click |
6 | 921835..922341 | PHAGE_Yersin_413C: gpB; APECO1_4461; phage(gi30065737) | 7e-93 | Click |
7 | 922629..922928 | PHAGE_Yersin_413C: hypothetical protein L-413Cp35; APECO1_4462; phage(gi30065739) | 8e-49 | Click |
8 | 923152..923427 | PHAGE_Yersin_413C: hypothetical protein L-413Cp37; APECO1_4463; phage(gi30065741) | 1e-46 | Click |
9 | 923417..925708 | PHAGE_Yersin_413C: gpA; APECO1_4464; phage(gi30065742) | 0.0 | Click |
10 | complement(925932..928148) | PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; APECO1_4465; phage(gi9631364) | 2e-07 | Click |
11 | complement(928652..929686) | PHAGE_Yersin_413C: gpQ; APECO1_4466; phage(gi30065705) | 0.0 | Click |
12 | complement(929686..931458) | PHAGE_Yersin_413C: gpP; APECO1_4467; phage(gi30065706) | 0.0 | Click |
13 | 931566..932486 | PHAGE_Yersin_413C: gpO; APECO1_4468; phage(gi30065707) | 7e-159 | Click |
14 | 932545..933618 | PHAGE_Yersin_413C: gpN; APECO1_4469; phage(gi30065708) | 0.0 | Click |
15 | 933622..934365 | PHAGE_Yersin_413C: gpM; APECO1_4470; phage(gi30065709) | 6e-136 | Click |
16 | 934405..934974 | PHAGE_Yersin_413C: gpL; APECO1_4471; phage(gi30065710) | 3e-92 | Click |
17 | 935181..935462 | PHAGE_Yersin_413C: gpY; APECO1_4472; phage(gi30065712) | 2e-45 | Click |
18 | 935462..935959 | PHAGE_Yersin_413C: gpK; APECO1_4473; phage(gi30065713) | 3e-94 | Click |
19 | 935974..936399 | PHAGE_Yersin_413C: LysA; APECO1_4474; phage(gi30065714) | 3e-67 | Click |
20 | 936387..936812 | PHAGE_Yersin_413C: LysB; APECO1_4475; phage(gi30065715) | 1e-68 | Click |
21 | 936920..937387 | PHAGE_Yersin_413C: gpR; APECO1_4476; phage(gi30065716) | 3e-82 | Click |
22 | 937380..937832 | PHAGE_Yersin_413C: gpS; APECO1_4477; phage(gi30065717) | 4e-80 | Click |
23 | 937899..938534 | PHAGE_Yersin_413C: gpV; APECO1_4478; phage(gi30065718) | 3e-117 | Click |
24 | 938531..938878 | PHAGE_Yersin_413C: gpW; APECO1_4479; phage(gi30065719) | 1e-60 | Click |
25 | 938883..939791 | PHAGE_Yersin_413C: gpJ; APECO1_4480; phage(gi30065720) | 6e-166 | Click |
26 | 939784..940314 | PHAGE_Yersin_413C: gpI; APECO1_4481; phage(gi30065721) | 5e-92 | Click |
27 | 940325..942334 | PHAGE_Yersin_413C: gpH; APECO1_4482; phage(gi30065722) | 2e-95 | Click |
28 | 942338..942865 | PHAGE_Yersin_413C: gpG; APECO1_44822; phage(gi30065723) | 5e-95 | Click |
29 | complement(943266..944852) | PHAGE_Entero_P2: Fun(Z); APECO1_1; phage(gi9630348) | 0.0 | Click |
30 | 945243..945659 | PHAGE_Yersin_413C: gpFI; APECO1_5; phage(gi30065725) | 7e-63 | Click |
31 | 945800..946996 | hypothetical protein; APECO1_6 | N/A | Click |
32 | 947354..948103 | PROPHAGE_Escher_CFT073: transposase/IS protein; APECO1_7; phage(gi26248359) | 1e-22 | Click |
33 | 948154..949020 | PHAGE_Yersin_413C: gpFI; APECO1_8; phage(gi30065725) | 1e-152 | Click |
34 | 949033..949551 | PHAGE_Yersin_413C: FII; APECO1_9; phage(gi30065726) | 6e-93 | Click |
35 | complement(949563..949952) | hypothetical protein; APECO1_10 | N/A | Click |
36 | 950028..952475 | PHAGE_Yersin_413C: gpT; APECO1_11; phage(gi30065729) | 0.0 | Click |
37 | 952490..952969 | PHAGE_Yersin_413C: gpU; APECO1_12; phage(gi30065730) | 9e-87 | Click |
38 | 952969..954132 | PHAGE_Yersin_413C: gpD; APECO1_13; phage(gi30065731) | 0.0 | Click |
39 | 954178..954432 | PHAGE_Yersin_413C: Ogr; APECO1_14; phage(gi30065732) | 2e-45 | Click |
40 | 954545..954557 | attR ACCAATAACTGAC | N/A | Click |
41 | complement(954751..957033) | PHAGE_Klebsi_KP27: hypothetical protein; APECO1_15; phage(gi448260626) | 1e-22 | Click |
Region 3, total : 54 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1178745..1178792 | attL CTACATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTT | N/A | Click |
2 | complement(1178855..1179997) | PHAGE_Entero_mEp235: integrase; APECO1_219; phage(gi428781836) | 2e-61 | Click |
3 | 1180553..1180984 | PHAGE_Stx2_c_I: hypothetical protein Stx2Ip085; APECO1_220; phage(gi20065880) | 2e-43 | Click |
4 | complement(1181863..1182543) | PHAGE_Stx2_c_1717: exonuclease; APECO1_221; phage(gi209447136) | 1e-132 | Click |
5 | complement(1182540..1183325) | PHAGE_Entero_lambda: bet; APECO1_222; phage(gi9626281) | 7e-151 | Click |
6 | complement(1183331..1183627) | PHAGE_Stx2_c_86: host-nuclease inhibitor protein Gam; APECO1_223; phage(gi116222045) | 8e-52 | Click |
7 | complement(1183703..1183972) | PHAGE_Stx2_c_86: putative host killing protein Kil; APECO1_224; phage(gi116222047) | 3e-44 | Click |
8 | complement(1184052..1184420) | PHAGE_Entero_lambda: Putative single-stranded DNA binding protein; APECO1_225; phage(gi9626285) | 2e-68 | Click |
9 | 1185017..1185598 | PHAGE_Entero_HK140: superinfection exclusion protein; APECO1_226; phage(gi428781984) | 1e-101 | Click |
10 | complement(1185615..1185959) | PHAGE_Stx2_c_1717: N protein; APECO1_227; phage(gi209447143) | 2e-58 | Click |
11 | complement(1186324..1187076) | PHAGE_Burkho_2: gp47, conserved hypothetical protein; APECO1_228; phage(gi134288670) | 6e-06 | Click |
12 | complement(1187073..1187513) | hypothetical protein; APECO1_229 | N/A | Click |
13 | complement(1187670..1188365) | PHAGE_Stx2_c_II: CI protein; APECO1_230; phage(gi302393138) | 8e-135 | Click |
14 | 1188371..1188655 | PHAGE_Stx2_c_II: Cro protein; APECO1_231; phage(gi302393139) | 2e-36 | Click |
15 | 1188797..1189093 | PHAGE_Entero_Min27: regulatory protein CII; APECO1_232; phage(gi170783637) | 2e-46 | Click |
16 | 1189126..1190025 | PHAGE_Entero_lambda: DNA replication protein; APECO1_233; phage(gi9626295) | 3e-174 | Click |
17 | 1190022..1190723 | PHAGE_Entero_lambda: DNA replication protein; APECO1_234; phage(gi9626296) | 6e-128 | Click |
18 | 1190720..1191010 | PHAGE_Entero_lambda: ren exclusion protein; APECO1_235; phage(gi9626297) | 1e-48 | Click |
19 | 1191084..1191524 | PHAGE_Entero_lambda: NinB; APECO1_236; phage(gi9626298) | 9e-82 | Click |
20 | 1191461..1192048 | PHAGE_Entero_c_1: DNA N-6-adenine-methyltransferase; APECO1_237; phage(gi428781789) | 8e-105 | Click |
21 | 1192182..1192565 | PHAGE_Salmon_ST160: NinX; APECO1_238; phage(gi318065936) | 9e-64 | Click |
22 | 1192772..1193134 | PHAGE_Entero_mEp237: Holliday junction resolvase RusA; APECO1_239; phage(gi435439318) | 5e-62 | Click |
23 | 1193357..1193740 | PHAGE_Entero_2008: antitermination protein Q; APECO1_240; phage(gi209427762) | 2e-56 | Click |
24 | complement(1193929..1195071) | outer membrane porin protein NmpC precursor; APECO1_241 | N/A | Click |
25 | 1195815..1196312 | PHAGE_Entero_cdtI: lysin; APECO1_242; phage(gi148609440) | 2e-91 | Click |
26 | 1196297..1196770 | PHAGE_Entero_lambda: cell lysis protein; APECO1_243; phage(gi9626310) | 8e-80 | Click |
27 | complement(1196802..1197110) | PHAGE_Entero_lambda: Bor protein precursor; APECO1_244; phage(gi19263395) | 4e-47 | Click |
28 | 1197522..1197902 | truncated TonB-like membrane protein encoded within prophage; APECO1_245 | N/A | Click |
29 | complement(1198025..1198378) | hypothetical protein; APECO1_246 | N/A | Click |
30 | 1198763..1199311 | PHAGE_Gifsy_1: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; APECO1_247; phage(gi169257236) | 3e-65 | Click |
31 | 1199241..1201211 | PHAGE_Entero_lambda: DNA packaging protein; terminase; phage large subunit; APECO1_248(gi9626245) | 0.0 | Click |
32 | 1201368..1202990 | PHAGE_Gifsy_1: bacteriophage portal protein; Lambda gpB homolog; APECO1_249; phage(gi169257233) | 0.0 | Click |
33 | 1202980..1204485 | PHAGE_Entero_lambda: capsid component; APECO1_250; phage(gi9626248) | 2e-107 | Click |
34 | complement(1204501..1204872) | hypothetical protein; APECO1_251 | N/A | Click |
35 | 1204927..1205955 | PHAGE_Entero_lambda: capsid component; APECO1_252; phage(gi9626251) | 1e-116 | Click |
36 | 1205959..1206381 | PHAGE_Entero_HK225: head assembly protein Fi; APECO1_253; phage(gi428782384) | 1e-07 | Click |
37 | 1206338..1206727 | PHAGE_Entero_lambda: head-tail joining protein; APECO1_254; phage(gi9626253) | 9e-40 | Click |
38 | 1206739..1207317 | PHAGE_Entero_lambda: tail component; APECO1_255; phage(gi9626254) | 2e-100 | Click |
39 | 1207314..1207709 | PHAGE_Entero_lambda: tail component; APECO1_256; phage(gi9626255) | 1e-70 | Click |
40 | 1207687..1208457 | PHAGE_Entero_lambda: tail component; APECO1_257; phage(gi9626256) | 2e-133 | Click |
41 | 1208473..1208895 | PHAGE_Entero_lambda: tail component; APECO1_258; phage(gi9626257) | 1e-69 | Click |
42 | 1208877..1209311 | PHAGE_Entero_lambda: tail component; APECO1_259; phage(gi9626258) | 8e-78 | Click |
43 | 1209304..1211865 | PHAGE_Entero_lambda: tail component; APECO1_260; phage(gi9626259) | 0.0 | Click |
44 | 1211862..1212191 | PHAGE_Entero_lambda: tail component; APECO1_261; phage(gi9626260) | 6e-54 | Click |
45 | 1212191..1212889 | PHAGE_Entero_lambda: tail component; APECO1_262; phage(gi9626261) | 8e-133 | Click |
46 | 1212895..1213638 | PHAGE_Entero_mEp460: tail fiber component; APECO1_263; phage(gi428782332) | 7e-148 | Click |
47 | 1213536..1214207 | PHAGE_Entero_lambda: tail component; APECO1_265; phage(gi9626263) | 3e-121 | Click |
48 | 1214268..1217018 | PHAGE_Entero_lambda: tail:host specificity protein; APECO1_266; phage(gi9626264) | 0.0 | Click |
49 | 1216993..1217751 | PHAGE_Stx2_c_1717: putative tail fiber component J; APECO1_267; phage(gi209447196) | 2e-120 | Click |
50 | 1217804..1219870 | PHAGE_Escher_bV_EcoS_AKFV33: putative tail fiber protein; APECO1_268; phage(gi388570497) | 5e-80 | Click |
51 | 1219867..1220145 | PHAGE_Escher_bV_EcoS_AKFV33: hypothetical protein; APECO1_269; phage(gi388570496) | 8e-06 | Click |
52 | 1220158..1220451 | PHAGE_Halomo_1: hypothetical protein HAPgp19; APECO1_270; phage(gi167832364) | 2e-07 | Click |
53 | complement(1220543..1221400) | Mn+2/Fe+2 ABC transporter inner membrane subunit SitD; APECO1_271 | N/A | Click |
54 | complement(1221397..1222254) | Mn+2/Fe+2 ABC transporter inner membrane subunit SitC; APECO1_272 | N/A | Click |
55 | complement(1222251..1223078) | PHAGE_Plankt_PaV_LD: ABC transporter; APECO1_273; phage(gi371496158) | 2e-13 | Click |
56 | 1226077..1226124 | attR CTACATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTT | N/A | Click |
Region 4, total : 32 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1338692..1339099 | PHAGE_Cronob_phiES15: hypothetical protein; APECO1_384; phage(gi401817580) | 2e-13 | Click |
2 | 1339101..1340147 | PHAGE_Entero_mEp460: hypothetical protein; APECO1_385; phage(gi428782365) | 5e-111 | Click |
3 | 1340160..1340534 | PHAGE_Escher_HK75: RusA-like protein; APECO1_386; phage(gi356870726) | 1e-35 | Click |
4 | 1340531..1341352 | PHAGE_Entero_HK225: late gene regulator Q; APECO1_387; phage(gi428782441) | 2e-90 | Click |
5 | 1341925..1342974 | PHAGE_Entero_phiP27: putative DNA methylase; APECO1_388; phage(gi18249888) | 0.0 | Click |
6 | 1343024..1343096 | tRNA | N/A | Click |
7 | 1343197..1343270 | tRNA | N/A | Click |
8 | 1344156..1344476 | PHAGE_Escher_P13374: lysis protein, holin; APECO1_389; phage(gi410491645) | 7e-43 | Click |
9 | 1344481..1344825 | PHAGE_Entero_mEp460: hypothetical protein; APECO1_390; phage(gi428782371) | 7e-39 | Click |
10 | complement(1344791..1345063) | hypothetical protein; APECO1_391 | N/A | Click |
11 | 1345263..1345703 | PHAGE_Stx2_c_86: lysozyme protein R; APECO1_392; phage(gi116221999) | 4e-72 | Click |
12 | complement(1345646..1345933) | hypothetical protein; APECO1_393 | N/A | Click |
13 | 1346002..1346466 | PHAGE_Entero_HK630: cell lysis protein Rz; APECO1_394; phage(gi428782852) | 1e-66 | Click |
14 | complement(1346774..1347199) | PHAGE_Entero_HK630: hypothetical protein; APECO1_395; phage(gi428782855) | 6e-56 | Click |
15 | 1347623..1348411 | PHAGE_Entero_HK630: terminase small subunit nu1; APECO1_396; phage(gi428782788) | 9e-51 | Click |
16 | 1348341..1350311 | PHAGE_Entero_HK630: terminase large subunit A; terminase; phage large subunit; APECO1_397(gi428782789) | 0.0 | Click |
17 | 1350498..1352090 | PHAGE_Entero_HK630: portal protein B; APECO1_398; phage(gi428782791) | 0.0 | Click |
18 | 1352080..1353585 | PHAGE_Entero_HK630: head maturation protease C; APECO1_399; phage(gi428782792) | 1e-107 | Click |
19 | complement(1353601..1353972) | hypothetical protein; APECO1_400 | N/A | Click |
20 | 1354027..1355055 | PHAGE_Entero_HK630: major head subunit E; APECO1_401; phage(gi428782795) | 1e-114 | Click |
21 | 1355059..1355490 | PHAGE_Gifsy_1: bacteriophage accessory DNA packaging protein; Lambda FI homolog; APECO1_402; phage(gi169257229) | 4e-12 | Click |
22 | 1355483..1355836 | PHAGE_Entero_HK630: head-tail connector Fii; APECO1_403; phage(gi428782797) | 5e-43 | Click |
23 | 1355852..1356385 | PHAGE_Entero_HK630: minor tail protein Z; APECO1_404; phage(gi428782798) | 2e-66 | Click |
24 | 1356382..1356777 | PHAGE_Entero_HK630: minor tail protein U; APECO1_405; phage(gi428782799) | 8e-59 | Click |
25 | complement(1356878..1358212) | hypothetical protein; APECO1_406 | N/A | Click |
26 | 1358403..1360976 | PHAGE_Entero_HK630: tail length tape measure protein H; APECO1_407; phage(gi428782803) | 0.0 | Click |
27 | 1360973..1361302 | PHAGE_Entero_HK630: minor tail protein M; APECO1_408; phage(gi428782804) | 4e-52 | Click |
28 | 1361302..1362000 | PHAGE_Entero_HK630: minor tail protein L; APECO1_409; phage(gi428782805) | 2e-131 | Click |
29 | 1362005..1362748 | PHAGE_Entero_mEp460: tail fiber component; APECO1_410; phage(gi428782332) | 1e-145 | Click |
30 | 1362646..1363287 | PHAGE_Entero_HK630: tail component I; APECO1_411; phage(gi428782807) | 8e-96 | Click |
31 | 1363361..1363699 | hypothetical protein; APECO1_412 | N/A | Click |
32 | 1363766..1367245 | PHAGE_Entero_HK630: tail fiber J; APECO1_413; phage(gi428782808) | 0.0 | Click |
33 | 1367313..1367912 | PHAGE_Entero_cdtI: putative Lom-like outer membrane protein; APECO1_414; phage(gi148609401) | 2e-107 | Click |
34 | 1368064..1371171 | PHAGE_Entero_mEp460: side tail fiber protein; APECO1_415; phage(gi428782336) | 3e-141 | Click |
Region 5, total : 39 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1467056..1467069 | attL GGGCAAACTTTGCA | N/A | Click |
2 | 1481483..1482082 | PHAGE_Entero_mEp237: hypothetical protein; APECO1_511; phage(gi435439315) | 9e-54 | Click |
3 | 1482249..1482905 | PHAGE_Salmon_vB_SosS_Oslo: antitermination protein Q; APECO1_512; phage(gi399528832) | 3e-06 | Click |
4 | 1483268..1483340 | tRNA | N/A | Click |
5 | 1483347..1483418 | tRNA | N/A | Click |
6 | 1484111..1484413 | PHAGE_Entero_cdtI: lysis protein; APECO1_513; phage(gi148609439) | 2e-35 | Click |
7 | 1484413..1484910 | PHAGE_Entero_cdtI: lysin; APECO1_514; phage(gi148609440) | 5e-92 | Click |
8 | 1484895..1485371 | PHAGE_Entero_cdtI: lysin; APECO1_515; phage(gi148609441) | 4e-58 | Click |
9 | 1485509..1486966 | Rac prophage; potassium transporter subunit; APECO1_516 | N/A | Click |
10 | 1487104..1487895 | PHAGE_Lactob_c5: putative ParB nuclease; APECO1_517; phage(gi418488153) | 6e-50 | Click |
11 | 1487867..1488820 | PHAGE_Lactob_c5: hypothetical protein; APECO1_518; phage(gi418488154) | 2e-51 | Click |
12 | 1488756..1489007 | hypothetical protein; APECO1_519 | N/A | Click |
13 | 1489347..1490105 | PHAGE_Burkho_Bcep22: Bcep22gp36; APECO1_520; phage(gi158997725) | 1e-27 | Click |
14 | 1490077..1491387 | PHAGE_Pseudo_H105/1: phage terminase large subunit; APECO1_521; phage(gi327198525) | 7e-111 | Click |
15 | 1491390..1492796 | PHAGE_Escher_HK639: hypothetical protein; APECO1_522; phage(gi356870603) | 0.0 | Click |
16 | 1492777..1493892 | PHAGE_Pseudo_MP1412: head morphogenesis/minor structural protein; APECO1_523; phage(gi399529016) | 3e-56 | Click |
17 | 1493925..1494761 | PHAGE_Escher_HK639: hypothetical protein; APECO1_524; phage(gi356870605) | 5e-90 | Click |
18 | 1494791..1495999 | PHAGE_Vibrio_vB_VpaS_MAR10: major capsid protein; APECO1_525; phage(gi428782119) | 2e-34 | Click |
19 | 1496270..1496665 | hypothetical protein; APECO1_526 | N/A | Click |
20 | 1496662..1497048 | PHAGE_Acinet_Bphi_B1251: hypothetical protein; APECO1_527; phage(gi423262010) | 3e-15 | Click |
21 | 1497049..1497429 | PHAGE_Salmon_SE2: hypothetical protein; APECO1_528; phage(gi375267267) | 6e-14 | Click |
22 | 1497426..1497818 | PHAGE_Acinet_Bphi_B1251: hypothetical protein; APECO1_529; phage(gi423262013) | 3e-10 | Click |
23 | 1497845..1498807 | PHAGE_Xantho_Xp15: possible phage minor tail protein; APECO1_530; phage(gi66392066) | 5e-06 | Click |
24 | 1498856..1499317 | Rac prophage hypothetical protein; APECO1_531 | N/A | Click |
25 | 1499789..1503022 | PHAGE_Entero_cdtI: putative tail protein; tail; phage protein; APECO1_532(gi148609395) | 4e-102 | Click |
26 | 1503015..1503353 | PHAGE_Entero_4795: putative minor tail protein; APECO1_533; phage(gi157166053) | 4e-29 | Click |
27 | 1503353..1504051 | PHAGE_Entero_cdtI: putative minor tail protein; APECO1_5332; phage(gi148609397) | 1e-134 | Click |
28 | 1504056..1504799 | PHAGE_Entero_cdtI: putative tail protein; APECO1_534; phage(gi148609398) | 2e-146 | Click |
29 | 1504697..1505344 | PHAGE_Entero_cdtI: putative tail component; APECO1_535; phage(gi148609399) | 1e-114 | Click |
30 | 1505405..1508803 | PHAGE_Entero_cdtI: putative tail tip assembly protein; APECO1_536; phage(gi148609400) | 0.0 | Click |
31 | 1508871..1509470 | PHAGE_Entero_cdtI: putative Lom-like outer membrane protein; APECO1_537; phage(gi148609401) | 1e-103 | Click |
32 | 1509529..1511910 | PHAGE_Escher_bV_EcoS_AKFV33: putative tail fiber protein; APECO1_538; phage(gi388570497) | 2e-108 | Click |
33 | 1511910..1512191 | hypothetical protein; APECO1_539 | N/A | Click |
34 | 1512201..1512905 | PHAGE_Marseillevirus: hypothetical protein MAR_ORF045; APECO1_540; phage(gi284504080) | 3e-05 | Click |
35 | 1512916..1513206 | PHAGE_Halomo_1: hypothetical protein HAPgp19; APECO1_541; phage(gi167832364) | 2e-07 | Click |
36 | 1513719..1514432 | PHAGE_Entero_cdtI: Cytolethal distending toxin A subunit; APECO1_542; phage(gi148609409) | 3e-134 | Click |
37 | 1514429..1515250 | PHAGE_Entero_cdtI: Cytolethal distending toxin B subunit; APECO1_543; phage(gi148609410) | 1e-149 | Click |
38 | 1515247..1515819 | PHAGE_Entero_cdtI: Cytolethal distending toxin C subunit; APECO1_544; phage(gi148609411) | 3e-92 | Click |
39 | complement(1515889..1517373) | hypothetical protein; APECO1_545 | N/A | Click |
40 | complement(1517558..1518508) | outer membrane protease; APECO1_546 | N/A | Click |
41 | complement(1518815..1519165) | hypothetical protein; APECO1_547 | N/A | Click |
42 | 1519383..1519396 | attR GGGCAAACTTTGCA | N/A | Click |
43 | complement(1519398..1519706) | PHAGE_Entero_phiP27: putative integrase; APECO1_548; phage(gi18249865) | 1e-25 | Click |
Region 6, total : 44 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2046665..2046676 | attL CTCCCTGACAGA | N/A | Click |
2 | 2046720..2046732 | attL ATGGCTTATGAAA | N/A | Click |
3 | complement(2052150..2052428) | PHAGE_Escher_bV_EcoS_AKFV33: hypothetical protein; APECO1_1012; phage(gi388570496) | 8e-06 | Click |
4 | complement(2052425..2054491) | PHAGE_Entero_mEp460: side tail fiber protein; APECO1_6001; phage(gi428782336) | 3e-77 | Click |
5 | complement(2054544..2058026) | PHAGE_Entero_mEp460: host specificity protein; APECO1_6002; phage(gi428782334) | 0.0 | Click |
6 | complement(2058087..2058758) | PHAGE_Entero_HK630: tail component I; APECO1_6003; phage(gi428782807) | 3e-121 | Click |
7 | complement(2058656..2059399) | PHAGE_Entero_mEp460: tail fiber component; APECO1_6004; phage(gi428782332) | 8e-144 | Click |
8 | 2059398..2060108 | hypothetical protein; APECO1_6005 | N/A | Click |
9 | complement(2060102..2060443) | PHAGE_Entero_mEp460: minor tail protein; APECO1_6006; phage(gi428782330) | 3e-23 | Click |
10 | complement(2060436..2063681) | PHAGE_Stx2_c_1717: tail tape measure protein; APECO1_6007; phage(gi209447190) | 0.0 | Click |
11 | complement(2063722..2064012) | PHAGE_Entero_HK544: tail protein; APECO1_1015; phage(gi428783227) | 6e-30 | Click |
12 | complement(2064024..2064410) | PHAGE_Stx2_c_1717: putative tail assembly chaperone; APECO1_1016; phage(gi209447188) | 2e-42 | Click |
13 | complement(2064410..2065165) | PHAGE_Entero_mEp234: major tail subunit; APECO1_1017; phage(gi428782264) | 5e-95 | Click |
14 | complement(2065174..2065518) | PHAGE_Cronob_ENT39118: putative minor tail protein; APECO1_1018; phage(gi431811079) | 4e-32 | Click |
15 | complement(2065515..2065964) | PHAGE_Entero_HK97: Gp10; APECO1_1019; phage(gi9634169) | 1e-64 | Click |
16 | complement(2065961..2066299) | PHAGE_Entero_HK97: putative head-tail adaptor; APECO1_1020; phage(gi9634168) | 3e-33 | Click |
17 | complement(2066308..2066796) | PHAGE_Entero_mEp235: head-tail connector II; APECO1_1021; phage(gi428781817) | 6e-17 | Click |
18 | complement(2066702..2067919) | PHAGE_Entero_SfV: capsid; APECO1_1022; phage(gi19548995) | 9e-161 | Click |
19 | complement(2067934..2068533) | PHAGE_Entero_SfV: capsid protease; APECO1_1023; phage(gi19548994) | 1e-90 | Click |
20 | complement(2068526..2069752) | PHAGE_Entero_SfV: portal protein; APECO1_1024; phage(gi19548993) | 0.0 | Click |
21 | complement(2069900..2071657) | PHAGE_Entero_mEp235: terminase large subunit; APECO1_1025; phage(gi428781812) | 0.0 | Click |
22 | complement(2071657..2072139) | PHAGE_Entero_mEp235: terminase small subunit; APECO1_1026; phage(gi428781811) | 3e-65 | Click |
23 | complement(2072287..2072637) | PHAGE_Entero_phiP27: hypothetical protein P27p34; APECO1_1027; phage(gi18249898) | 4e-60 | Click |
24 | complement(2072680..2073147) | PHAGE_Entero_cdtI: lysin; APECO1_1028; phage(gi148609441) | 2e-73 | Click |
25 | complement(2073144..2073677) | PHAGE_Entero_mEp460: endolysin; APECO1_1029; phage(gi428782372) | 9e-100 | Click |
26 | complement(2073741..2074091) | PHAGE_Entero_mEp460: hypothetical protein; APECO1_1030; phage(gi428782371) | 3e-39 | Click |
27 | complement(2074608..2074679) | tRNA | N/A | Click |
28 | complement(2074686..2074758) | tRNA | N/A | Click |
29 | complement(2074761..2074837) | tRNA | N/A | Click |
30 | complement(2074842..2074914) | tRNA | N/A | Click |
31 | complement(2075039..2075752) | hypothetical protein; APECO1_1031 | N/A | Click |
32 | complement(2075982..2076677) | PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; APECO1_1032; phage(gi169257244) | 1e-79 | Click |
33 | complement(2076668..2077033) | PHAGE_Escher_HK75: RusA-like protein; APECO1_1033; phage(gi356870726) | 1e-39 | Click |
34 | complement(2077034..2078089) | PHAGE_Entero_mEp460: hypothetical protein; APECO1_1034; phage(gi428782365) | 6e-91 | Click |
35 | complement(2079275..2079790) | PHAGE_Salmon_ST64B: hypothetical protein sb32; APECO1_1035; phage(gi23505476) | 4e-11 | Click |
36 | complement(2080232..2080621) | PHAGE_Stx2_c_I: hypothetical protein Stx2Ip073; APECO1_1036; phage(gi20065868) | 3e-08 | Click |
37 | complement(2080590..2080901) | PHAGE_Escher_P13374: hypothetical protein; APECO1_1037; phage(gi410491609) | 5e-07 | Click |
38 | complement(2080917..2081324) | hypothetical protein; APECO1_1038 | N/A | Click |
39 | complement(2081365..2082441) | PHAGE_Entero_mEp460: replication protein; APECO1_1040; phage(gi428782359) | 6e-28 | Click |
40 | complement(2082507..2082932) | PHAGE_Pectob_ZF40: putative cII repressor; APECO1_1041; phage(gi422936652) | 1e-05 | Click |
41 | complement(2082929..2083255) | PHAGE_Escher_HK75: regulatory protein cro; APECO1_1042; phage(gi356870715) | 2e-18 | Click |
42 | 2083263..2083682 | PHAGE_Entero_HK022: regulatory protein cI; APECO1_1043; phage(gi19343388) | 3e-21 | Click |
43 | 2083983..2084339 | hypothetical protein; APECO1_1044 | N/A | Click |
44 | complement(2084633..2084926) | hypothetical protein; APECO1_1045 | N/A | Click |
45 | complement(2085001..2085333) | hypothetical protein; APECO1_1046 | N/A | Click |
46 | 2085328..2085585 | hypothetical protein; APECO1_1047 | N/A | Click |
47 | 2085665..2088136 | PHAGE_Entero_mEp460: putative exonuclease; APECO1_1048; phage(gi428782342) | 7e-59 | Click |
48 | 2088398..2089423 | PHAGE_Salmon_ST64B: Integrase protein; APECO1_1049; phage(gi23505472) | 1e-104 | Click |
49 | complement(2089479..2089565) | tRNA | N/A | Click |
50 | 2089620..2090456 | hypothetical protein; APECO1_1050 | N/A | Click |
51 | 2090490..2090502 | attR ATGGCTTATGAAA | N/A | Click |
52 | 2090557..2090629 | tRNA | N/A | Click |
53 | 2091013..2091975 | PROPHAGE_Escher_CFT073: prophage P4 integrase; APECO1_1051; phage(gi26248270) | 0.0 | Click |
54 | 2099597..2099608 | attR CTCCCTGACAGA | N/A | Click |
Region 7, total : 8 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2259304..2259318 | attL CATTGACCACATCGA | N/A | Click |
2 | 2272731..2273765 | PHAGE_Yersin_413C: gpQ; APECO1_1181; phage(gi30065705) | 0.0 | Click |
3 | 2274092..2275141 | hypothetical protein; APECO1_1182 | N/A | Click |
4 | 2275134..2276417 | hypothetical protein; APECO1_1183 | N/A | Click |
5 | complement(2276593..2278848) | PHAGE_Yersin_413C: gpA; APECO1_1184; phage(gi30065742) | 0.0 | Click |
6 | complement(2279337..2279636) | PHAGE_Yersin_413C: hypothetical protein L-413Cp35; APECO1_1185; phage(gi30065739) | 2e-48 | Click |
7 | complement(2279924..2280430) | PHAGE_Yersin_413C: gpB; APECO1_1186; phage(gi30065737) | 6e-92 | Click |
8 | 2280992..2281291 | PHAGE_Yersin_413C: gpC; APECO1_4459; phage(gi30065734) | 3e-18 | Click |
9 | 2281407..2282420 | PHAGE_Yersin_413C: Int; APECO1_4458; phage(gi30065733) | 1e-91 | Click |
10 | 2282559..2282573 | attR CATTGACCACATCGA | N/A | Click |
Region 8, total : 47 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2570047..2570063 | attL CTGCAGGGGACACCATT | N/A | Click |
2 | 2570223..2571380 | PHAGE_Entero_IME10: integrase; APECO1_4218; phage(gi422934296) | 0.0 | Click |
3 | complement(2571620..2572543) | PHAGE_Emilia_86: hypothetical protein EhV247; APECO1_4217; phage(gi73852718) | 3e-07 | Click |
4 | complement(2572697..2575642) | PHAGE_Escher_phAPEC8: tail fiber protein; APECO1_4216; phage(gi448260439) | 0.0 | Click |
5 | complement(2575743..2576645) | PHAGE_Salmon_epsilon34: Ant; APECO1_4215; phage(gi221328691) | 4e-169 | Click |
6 | 2577393..2577929 | PHAGE_Strept_1: head maturation protease; APECO1_4214; phage(gi28876177) | 4e-07 | Click |
7 | complement(2577978..2578427) | PHAGE_Escher_HK639: hypothetical protein; APECO1_4213; phage(gi356870618) | 7e-46 | Click |
8 | complement(2578436..2579002) | PHAGE_Escher_HK639: hypothetical protein; APECO1_4212; phage(gi356870617) | 1e-25 | Click |
9 | 2579199..2579528 | hypothetical protein; APECO1_42112 | N/A | Click |
10 | complement(2579546..2581561) | PHAGE_Entero_P22: injection protein; APECO1_4211; phage(gi51236731) | 7e-65 | Click |
11 | complement(2581558..2583009) | PHAGE_Entero_P22: injection protein; APECO1_4210; phage(gi9635545) | 4e-160 | Click |
12 | complement(2583020..2583712) | PHAGE_Salmon_vB_SemP_Emek: injection protein; APECO1_4209; phage(gi399498802) | 4e-118 | Click |
13 | complement(2583715..2584170) | PHAGE_Entero_IME10: head assembly protein; APECO1_4208; phage(gi422934287) | 3e-87 | Click |
14 | complement(2584170..2584871) | PHAGE_Entero_IME10: DNA stabilization protein; APECO1_4207; phage(gi422934286) | 2e-120 | Click |
15 | complement(2584871..2586289) | PHAGE_Entero_IME10: DNA stabilization protein; APECO1_4206; phage(gi422934285) | 0.0 | Click |
16 | complement(2586299..2586760) | PHAGE_Sodali_phiSG1: phage DNA stabilization protein; APECO1_4205; phage(gi89885996) | 2e-27 | Click |
17 | complement(2586971..2588224) | PHAGE_Entero_P22: coat protein; APECO1_4204; phage(gi9635538) | 2e-34 | Click |
18 | complement(2588243..2589136) | PHAGE_Entero_Sf6: gene 4 protein; APECO1_4203; phage(gi41057282) | 1e-28 | Click |
19 | complement(2589227..2591425) | PHAGE_Bacter_2: portal protein; APECO1_4202; phage(gi212499722) | 0.0 | Click |
20 | complement(2591427..2592842) | PHAGE_Entero_Sf6: gene 2 protein; APECO1_4201; phage(gi41057280) | 0.0 | Click |
21 | complement(2592839..2593279) | PHAGE_Riemer_RAP44: hypothetical protein; APECO1_4200; phage(gi418489899) | 6e-30 | Click |
22 | complement(2593282..2593524) | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; APECO1_4199; phage(gi399498861) | 6e-39 | Click |
23 | complement(2593752..2594363) | PHAGE_Escher_P13374: regulatory protein; APECO1_4198; phage(gi410491650) | 6e-61 | Click |
24 | complement(2594640..2595077) | PHAGE_Entero_Sf6: gene 63 protein; APECO1_4197; phage(gi41057336) | 2e-75 | Click |
25 | complement(2595074..2595550) | PHAGE_Entero_HK140: lysin; APECO1_4196; phage(gi428782005) | 1e-89 | Click |
26 | complement(2595534..2595857) | PHAGE_Entero_IME10: holin; APECO1_4195; phage(gi422934276) | 1e-55 | Click |
27 | complement(2596454..2596972) | PHAGE_Salmon_ST160: Gp23; APECO1_4194; phage(gi318065942) | 2e-96 | Click |
28 | complement(2597154..2597516) | PHAGE_Escher_HK75: RusA-like protein; APECO1_4193; phage(gi356870726) | 8e-65 | Click |
29 | complement(2597513..2597803) | PHAGE_Salmon_SPN9CC: hypothetical protein; APECO1_4192; phage(gi389060524) | 7e-53 | Click |
30 | complement(2597803..2598525) | PHAGE_Entero_HK140: DNA-binding protein; APECO1_4191; phage(gi428781998) | 3e-131 | Click |
31 | complement(2598687..2599112) | PHAGE_Entero_HK446: NinX protein; APECO1_4190; phage(gi428782242) | 6e-16 | Click |
32 | complement(2599282..2599542) | PHAGE_Escher_HK75: NinB; APECO1_4189; phage(gi356870721) | 1e-42 | Click |
33 | complement(2599892..2600206) | PHAGE_Entero_Sf6: gene 48 protein; APECO1_4188; phage(gi41057325) | 2e-25 | Click |
34 | complement(2600601..2601977) | PHAGE_Entero_mEp213: replicative DNA helicase; APECO1_4187; phage(gi428782646) | 0.0 | Click |
35 | complement(2601974..2602921) | PHAGE_Salmon_SPN9CC: bacteriophage replication protein O; APECO1_4186; phage(gi389060512) | 6e-68 | Click |
36 | complement(2602924..2603196) | hypothetical protein; APECO1_4185 | N/A | Click |
37 | complement(2603219..2603599) | PHAGE_Entero_IME10: cII; APECO1_4184; phage(gi422934270) | 8e-36 | Click |
38 | 2603887..2604537 | PHAGE_Entero_IME10: repressor protein; APECO1_4183; phage(gi422934295) | 4e-124 | Click |
39 | complement(2604659..2604955) | hypothetical protein; APECO1_4182 | N/A | Click |
40 | 2605060..2605359 | PHAGE_Entero_mEp213: antitermination protein N; APECO1_4180; phage(gi428782636) | 3e-28 | Click |
41 | 2605368..2605838 | PHAGE_Stx2_c_I: hypothetical protein Stx2Ip113; APECO1_4179; phage(gi20065908) | 1e-90 | Click |
42 | 2606460..2607065 | PHAGE_Entero_mEp234: essential recombination function protein; APECO1_4178; phage(gi428782283) | 8e-111 | Click |
43 | 2607065..2607448 | PHAGE_Entero_mEp213: hypothetical protein; APECO1_4177; phage(gi428782627) | 2e-68 | Click |
44 | 2607472..2607768 | PHAGE_Entero_mEp235: Abc2 protein; APECO1_4176; phage(gi428781839) | 1e-54 | Click |
45 | complement(2607817..2608503) | hypothetical protein; APECO1_4175 | N/A | Click |
46 | 2608679..2609251 | PHAGE_Entero_ST104: ORF8; APECO1_4174; phage(gi46358656) | 9e-48 | Click |
47 | complement(2609618..2609953) | hypothetical protein; APECO1_4173 | N/A | Click |
48 | 2610385..2610401 | attR CTGCAGGGGACACCATT | N/A | Click |
49 | complement(2610499..2611434) | PHAGE_Burkho_phi1026b: gp58; APECO1_4172; phage(gi38707948) | 4e-16 | Click |
Region 9, total : 46 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2738153..2738671 | PHAGE_Escher_TL_2011b: putative outer membrane lipoprotein; APECO1_4064; phage(gi418487638) | 3e-93 | Click |
2 | 2738687..2739226 | PHAGE_Escher_TL_2011b: hypothetical protein; APECO1_4063; phage(gi418487682) | 3e-95 | Click |
3 | 2739318..2739334 | attL AATCATTCCCACTCAAT | N/A | Click |
4 | complement(2739422..2739919) | PHAGE_Entero_phiV10: putative lysis accessory protein; APECO1_4062; phage(gi89152449) | 1e-34 | Click |
5 | complement(2739916..2740545) | PHAGE_Entero_phiV10: putative endolysin; APECO1_4061; phage(gi89152448) | 8e-115 | Click |
6 | complement(2740535..2740843) | PHAGE_Entero_phiV10: putative holin; APECO1_4060; phage(gi89152447) | 2e-43 | Click |
7 | complement(2740830..2741234) | PHAGE_Entero_phiV10: putative integral membrane protein; APECO1_4059; phage(gi89152446) | 9e-64 | Click |
8 | complement(2741541..2744660) | PHAGE_Escher_phAPEC8: tail fiber protein; APECO1_4058; phage(gi448260439) | 0.0 | Click |
9 | 2744733..2745113 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p24; APECO1_4057; phage(gi89152444) | 3e-44 | Click |
10 | 2745429..2746124 | PHAGE_Entero_phiV10: putative anti-immunity protein; APECO1_4056; phage(gi89152443) | 2e-98 | Click |
11 | complement(2747195..2747611) | hypothetical protein; APECO1_4055 | N/A | Click |
12 | complement(2747795..2750269) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p20; APECO1_4054; phage(gi89152441) | 0.0 | Click |
13 | complement(2750275..2752077) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p19; APECO1_4053; phage(gi89152440) | 0.0 | Click |
14 | complement(2752074..2754587) | PHAGE_Entero_phiV10: hypothetical structural protein; APECO1_4052; phage(gi89152439) | 0.0 | Click |
15 | complement(2754600..2755139) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p17; APECO1_4051; phage(gi89152438) | 2e-56 | Click |
16 | complement(2755139..2755603) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p16; APECO1_4050; phage(gi89152437) | 7e-86 | Click |
17 | complement(2755603..2758074) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p15; APECO1_4049; phage(gi89152436) | 0.0 | Click |
18 | complement(2758074..2758679) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p14; APECO1_4048; phage(gi89152435) | 8e-114 | Click |
19 | complement(2758679..2759008) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p13; APECO1_4047; phage(gi89152434) | 2e-55 | Click |
20 | complement(2759053..2759397) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p12; APECO1_4046; phage(gi89152433) | 4e-59 | Click |
21 | complement(2759399..2759836) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p11; APECO1_4045; phage(gi89152432) | 1e-74 | Click |
22 | complement(2759888..2760880) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p10; APECO1_4044; phage(gi89152431) | 0.0 | Click |
23 | complement(2760889..2761590) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p09; APECO1_4043; phage(gi89152430) | 1e-128 | Click |
24 | complement(2761587..2761883) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p08; APECO1_4042; phage(gi89152429) | 3e-50 | Click |
25 | complement(2761880..2763559) | PHAGE_Entero_phiV10: putative head-to-tail-joining protein; APECO1_4041; phage(gi89152428) | 0.0 | Click |
26 | 2764208..2764281 | tRNA | N/A | Click |
27 | 2764483..2764863 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p03; APECO1_4039; phage(gi89152424) | 4e-41 | Click |
28 | complement(2764954..2766429) | PHAGE_Entero_phiV10: putative terminase large subunit; APECO1_4038; phage(gi89152423) | 0.0 | Click |
29 | complement(2766426..2767031) | PHAGE_Entero_phiV10: putative terminase small subunit; APECO1_4037; phage(gi155370097) | 9e-110 | Click |
30 | complement(2767327..2767674) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p55; APECO1_4036; phage(gi89152469) | 3e-52 | Click |
31 | complement(2767780..2768310) | PHAGE_Entero_ST104: ORF8; APECO1_4035; phage(gi46358656) | 3e-48 | Click |
32 | complement(2768307..2768720) | PHAGE_Escher_HK75: hypothetical protein; APECO1_4034; phage(gi356870705) | 4e-28 | Click |
33 | complement(2768886..2769203) | PHAGE_Salmon_E1: hypothetical protein VIP0051; APECO1_4033; phage(gi170676326) | 1e-35 | Click |
34 | complement(2769200..2769679) | PHAGE_Entero_phiV10: eae-like protein; APECO1_4032; phage(gi89152462) | 3e-30 | Click |
35 | complement(2769741..2770085) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p45; APECO1_4031; phage(gi89152461) | 1e-62 | Click |
36 | complement(2770203..2770979) | PHAGE_Entero_phiV10: putative replication protein p; APECO1_4030; phage(gi155370096) | 1e-113 | Click |
37 | complement(2770951..2771799) | PHAGE_Entero_phiV10: putative primosomal protein; APECO1_4029; phage(gi89152459) | 5e-13 | Click |
38 | 2772508..2773092 | PHAGE_Entero_phiV10: putative transcriptional repressor; APECO1_4028; phage(gi89152457) | 7e-107 | Click |
39 | 2773386..2773700 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p38; APECO1_4027; phage(gi89152455) | 2e-48 | Click |
40 | 2773697..2774596 | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p35; APECO1_4026; phage(gi30387414) | 3e-158 | Click |
41 | 2774606..2775628 | PHAGE_Entero_epsilon15: RecT; APECO1_4025; phage(gi30387413) | 2e-178 | Click |
42 | 2775678..2775926 | PHAGE_Entero_phiV10: putative transcriptional regulator; APECO1_4024; phage(gi89152453) | 4e-44 | Click |
43 | 2776036..2776335 | PHAGE_Entero_phiV10: putative transcriptional activator; APECO1_4023; phage(gi155370095) | 5e-46 | Click |
44 | 2776328..2776978 | PHAGE_Entero_phiV10: putative adenine methylase; APECO1_4022; phage(gi89152451) | 7e-124 | Click |
45 | 2776855..2777634 | PHAGE_Entero_HK225: NinI protein; APECO1_4021; phage(gi428782438) | 1e-102 | Click |
46 | complement(2777637..2778893) | PHAGE_Entero_phiV10: putative integrase; APECO1_4020; phage(gi89152450) | 0.0 | Click |
47 | 2779084..2779100 | attR AATCATTCCCACTCAAT | N/A | Click |
48 | complement(2779086..2780663) | GMP synthase; APECO1_4019 | N/A | Click |
49 | complement(2780732..2782267) | PHAGE_Staphy_42E: ORF012; APECO1_4018; phage(gi66395520) | 4e-32 | Click |
Region 10, total : 36 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2739318..2739334 | attL AATCATTCCCACTCAAT | N/A | Click |
2 | complement(2747795..2750269) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p20; APECO1_4054; phage(gi89152441) | 0.0 | Click |
3 | complement(2750275..2752077) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p19; APECO1_4053; phage(gi89152440) | 0.0 | Click |
4 | complement(2752074..2754587) | PHAGE_Entero_phiV10: hypothetical structural protein; APECO1_4052; phage(gi89152439) | 0.0 | Click |
5 | complement(2754600..2755139) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p17; APECO1_4051; phage(gi89152438) | 2e-56 | Click |
6 | complement(2755139..2755603) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p16; APECO1_4050; phage(gi89152437) | 7e-86 | Click |
7 | complement(2755603..2758074) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p15; APECO1_4049; phage(gi89152436) | 0.0 | Click |
8 | complement(2758074..2758679) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p14; APECO1_4048; phage(gi89152435) | 8e-114 | Click |
9 | complement(2758679..2759008) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p13; APECO1_4047; phage(gi89152434) | 2e-55 | Click |
10 | complement(2759053..2759397) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p12; APECO1_4046; phage(gi89152433) | 4e-59 | Click |
11 | complement(2759399..2759836) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p11; APECO1_4045; phage(gi89152432) | 1e-74 | Click |
12 | complement(2759888..2760880) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p10; APECO1_4044; phage(gi89152431) | 0.0 | Click |
13 | complement(2760889..2761590) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p09; APECO1_4043; phage(gi89152430) | 1e-128 | Click |
14 | complement(2761587..2761883) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p08; APECO1_4042; phage(gi89152429) | 3e-50 | Click |
15 | complement(2761880..2763559) | PHAGE_Entero_phiV10: putative head-to-tail-joining protein; APECO1_4041; phage(gi89152428) | 0.0 | Click |
16 | 2764208..2764281 | tRNA | N/A | Click |
17 | 2764483..2764863 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p03; APECO1_4039; phage(gi89152424) | 4e-41 | Click |
18 | complement(2764954..2766429) | PHAGE_Entero_phiV10: putative terminase large subunit; APECO1_4038; phage(gi89152423) | 0.0 | Click |
19 | complement(2766426..2767031) | PHAGE_Entero_phiV10: putative terminase small subunit; APECO1_4037; phage(gi155370097) | 9e-110 | Click |
20 | complement(2767327..2767674) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p55; APECO1_4036; phage(gi89152469) | 3e-52 | Click |
21 | complement(2767780..2768310) | PHAGE_Entero_ST104: ORF8; APECO1_4035; phage(gi46358656) | 3e-48 | Click |
22 | complement(2768307..2768720) | PHAGE_Escher_HK75: hypothetical protein; APECO1_4034; phage(gi356870705) | 4e-28 | Click |
23 | complement(2768886..2769203) | PHAGE_Salmon_E1: hypothetical protein VIP0051; APECO1_4033; phage(gi170676326) | 1e-35 | Click |
24 | complement(2769200..2769679) | PHAGE_Entero_phiV10: eae-like protein; APECO1_4032; phage(gi89152462) | 3e-30 | Click |
25 | complement(2769741..2770085) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p45; APECO1_4031; phage(gi89152461) | 1e-62 | Click |
26 | complement(2770203..2770979) | PHAGE_Entero_phiV10: putative replication protein p; APECO1_4030; phage(gi155370096) | 1e-113 | Click |
27 | complement(2770951..2771799) | PHAGE_Entero_phiV10: putative primosomal protein; APECO1_4029; phage(gi89152459) | 5e-13 | Click |
28 | 2772508..2773092 | PHAGE_Entero_phiV10: putative transcriptional repressor; APECO1_4028; phage(gi89152457) | 7e-107 | Click |
29 | 2773386..2773700 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p38; APECO1_4027; phage(gi89152455) | 2e-48 | Click |
30 | 2773697..2774596 | PHAGE_Entero_epsilon15: hypothetical protein epsilon15p35; APECO1_4026; phage(gi30387414) | 3e-158 | Click |
31 | 2774606..2775628 | PHAGE_Entero_epsilon15: RecT; APECO1_4025; phage(gi30387413) | 2e-178 | Click |
32 | 2775678..2775926 | PHAGE_Entero_phiV10: putative transcriptional regulator; APECO1_4024; phage(gi89152453) | 4e-44 | Click |
33 | 2776036..2776335 | PHAGE_Entero_phiV10: putative transcriptional activator; APECO1_4023; phage(gi155370095) | 5e-46 | Click |
34 | 2776328..2776978 | PHAGE_Entero_phiV10: putative adenine methylase; APECO1_4022; phage(gi89152451) | 7e-124 | Click |
35 | 2776855..2777634 | PHAGE_Entero_HK225: NinI protein; APECO1_4021; phage(gi428782438) | 1e-102 | Click |
36 | complement(2777637..2778893) | PHAGE_Entero_phiV10: putative integrase; APECO1_4020; phage(gi89152450) | 0.0 | Click |
37 | 2779084..2779100 | attR AATCATTCCCACTCAAT | N/A | Click |
38 | complement(2779086..2780663) | GMP synthase; APECO1_4019 | N/A | Click |
39 | complement(2780732..2782267) | PHAGE_Staphy_42E: ORF012; APECO1_4018; phage(gi66395520) | 4e-32 | Click |
Region 11, total : 45 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2915067..2915093 | attL CCAATCATGATTGGACGGTGTAAGGAC | N/A | Click |
2 | 2920995..2921489 | PHAGE_Entero_HK106: side tail fiber protein; APECO1_3910; phage(gi428783303) | 6e-46 | Click |
3 | 2921489..2922091 | PHAGE_Entero_HK106: tail fiber assembly protein; APECO1_3909; phage(gi428783304) | 3e-96 | Click |
4 | complement(2922063..2922506) | PHAGE_Entero_mEp213: tail fiber assembly protein; APECO1_3908; phage(gi428782612) | 2e-24 | Click |
5 | complement(2923256..2923840) | PHAGE_Entero_SfV: tail protein; APECO1_3907; phage(gi19548988) | 8e-113 | Click |
6 | complement(2923831..2924889) | PHAGE_Entero_SfV: tail protein; APECO1_3906; phage(gi19549009) | 0.0 | Click |
7 | complement(2924876..2925304) | PHAGE_Entero_SfV: tail protein; APECO1_3905; phage(gi19549008) | 1e-80 | Click |
8 | complement(2925301..2925849) | PHAGE_Entero_SfV: tail protein; APECO1_3904; phage(gi19549007) | 2e-98 | Click |
9 | complement(2925849..2926928) | PHAGE_Entero_SfV: tail protein; APECO1_3903; phage(gi19549006) | 0.0 | Click |
10 | complement(2926925..2928295) | PHAGE_Entero_SfV: tail/DNA circulation protein; APECO1_3902; phage(gi19549005) | 0.0 | Click |
11 | complement(2928314..2930149) | PHAGE_Entero_SfV: tail protein; APECO1_3901; phage(gi19549004) | 0.0 | Click |
12 | 2930148..2930441 | hypothetical protein; APECO1_3900 | N/A | Click |
13 | complement(2930560..2930916) | PHAGE_Entero_SfV: hypothetical protein SfVp12; APECO1_3899; phage(gi19549002) | 3e-65 | Click |
14 | complement(2930916..2932412) | PHAGE_Entero_SfV: tail sheath protein; APECO1_3898; phage(gi19549001) | 0.0 | Click |
15 | complement(2932575..2933135) | PHAGE_Entero_SfV: hypothetical protein SfVp09; APECO1_3897; phage(gi19548999) | 5e-104 | Click |
16 | complement(2933132..2933638) | PHAGE_Entero_SfV: hypothetical protein SfVp08; APECO1_3896; phage(gi19548998) | 2e-94 | Click |
17 | complement(2933613..2934023) | PHAGE_Entero_SfV: hypothetical protein SfVp07; APECO1_3895; phage(gi19548997) | 5e-52 | Click |
18 | complement(2934020..2934343) | PHAGE_Entero_SfV: hypothetical protein SfVp06; APECO1_3894; phage(gi19548996) | 3e-34 | Click |
19 | complement(2934596..2935801) | PHAGE_Salmon_ST64B: Major capsid protein precursor; APECO1_3893; phage(gi23505451) | 0.0 | Click |
20 | complement(2935816..2936502) | PHAGE_Salmon_ST64B: Pro-head protease; APECO1_3892; phage(gi23505450) | 9e-126 | Click |
21 | complement(2936444..2937559) | PHAGE_Salmon_ST64B: Portal Protein; APECO1_3891; phage(gi23505449) | 0.0 | Click |
22 | complement(2937879..2939612) | PHAGE_Entero_SfV: large terminase subunit; APECO1_3890; phage(gi19548992) | 0.0 | Click |
23 | complement(2939609..2940103) | PHAGE_Entero_SfV: small terminase subunit; APECO1_3889; phage(gi19548991) | 4e-90 | Click |
24 | complement(2940229..2940579) | PHAGE_Entero_SfV: hypothetical protein SfVp53; APECO1_3888; phage(gi19549040) | 1e-64 | Click |
25 | complement(2941550..2941987) | PHAGE_Escher_HK75: Rz; APECO1_3887; phage(gi356870731) | 1e-69 | Click |
26 | complement(2941984..2942460) | PHAGE_Escher_HK75: lysozyme; APECO1_3886; phage(gi356870730) | 9e-84 | Click |
27 | complement(2942447..2942851) | PHAGE_Salmon_ST160: Gp13; APECO1_3885; phage(gi318065943) | 2e-39 | Click |
28 | complement(2942904..2943239) | hypothetical protein; APECO1_3884 | N/A | Click |
29 | complement(2943425..2944177) | PHAGE_Entero_SfV: antitermination protein Q; antitermination; phage protein Q; APECO1_3883(gi19549033) | 3e-143 | Click |
30 | complement(2944191..2945144) | PHAGE_Entero_SfV: hypothetical protein SfVp45; APECO1_3882; phage(gi19549032) | 1e-178 | Click |
31 | complement(2945188..2945985) | PHAGE_Entero_SfV: hypothetical protein SfVp44; APECO1_3881; phage(gi19549031) | 4e-133 | Click |
32 | complement(2946005..2946394) | PHAGE_Entero_SfV: crossover junction endodeoxyribonuclease; APECO1_3880; phage(gi19549030) | 1e-70 | Click |
33 | complement(2946391..2946717) | PHAGE_Entero_SfV: hypothetical protein SfVp42; APECO1_3879; phage(gi19549029) | 1e-54 | Click |
34 | complement(2946714..2947367) | PHAGE_Entero_SfV: DNA adenine methylase; APECO1_3878; phage(gi19549028) | 5e-126 | Click |
35 | complement(2947367..2947855) | PHAGE_Entero_SfV: hypothetical protein SfVp40; APECO1_3877; phage(gi19549027) | 2e-88 | Click |
36 | complement(2947858..2948799) | PHAGE_Entero_phiP27: hypothetical protein P27p17; APECO1_3876; phage(gi18249881) | 2e-41 | Click |
37 | complement(2948809..2949147) | hypothetical protein; APECO1_3875 | N/A | Click |
38 | complement(2949144..2949707) | PHAGE_Entero_SfV: hypothetical protein SfVp36; DNA-binding; phage transcriptional regulator; APECO1_3874(gi19549023) | 2e-93 | Click |
39 | complement(2949739..2950044) | PHAGE_Entero_SfV: repressor; APECO1_3873; phage(gi19549022) | 4e-33 | Click |
40 | 2950030..2950704 | PHAGE_Entero_SfV: repressor; APECO1_3872; phage(gi19549021) | 5e-132 | Click |
41 | complement(2950907..2951419) | hypothetical protein; APECO1_3871 | N/A | Click |
42 | 2951570..2952250 | PHAGE_Entero_SfV: hypothetical protein SfVp32; APECO1_3870; phage(gi19549019) | 1e-61 | Click |
43 | 2952316..2953140 | PHAGE_Entero_SfV: hypothetical protein SfVp31; APECO1_3869; phage(gi19549018) | 9e-152 | Click |
44 | 2953268..2953792 | PHAGE_Entero_SfV: hypothetical protein SfVp30; APECO1_3868; phage(gi19549017) | 2e-94 | Click |
45 | 2953901..2954767 | hypothetical protein; APECO1_3867 | N/A | Click |
46 | 2954976..2956148 | PHAGE_Cronob_phiES15: putative integrase; APECO1_3866; phage(gi401817566) | 6e-148 | Click |
47 | 2958186..2958212 | attR CCAATCATGATTGGACGGTGTAAGGAC | N/A | Click |
Region 12, total : 44 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 5000558..5000570 | attL TACGCCGCATCCG | N/A | Click |
2 | 5003436..5003449 | attL CTTTCACTCTTTCA | N/A | Click |
3 | 5003641..5004855 | PHAGE_Entero_cdtI: Phage integrase; APECO1_2052; phage(gi148609414) | 0.0 | Click |
4 | complement(5005231..5006226) | hypothetical protein; APECO1_2051 | N/A | Click |
5 | complement(5006794..5007414) | PHAGE_Entero_cdtI: Valyl-tRNA synthetase; APECO1_2050; phage(gi148609417) | 4e-120 | Click |
6 | complement(5007414..5007776) | PHAGE_Entero_mEp460: hypothetical protein; APECO1_2049; phage(gi428782348) | 2e-66 | Click |
7 | complement(5007767..5008333) | PHAGE_Entero_mEp460: hypothetical protein; APECO1_2048; phage(gi428782349) | 3e-100 | Click |
8 | complement(5008431..5009255) | PHAGE_Entero_mEp460: hypothetical protein; APECO1_2047; phage(gi428782350) | 2e-151 | Click |
9 | complement(5009321..5009701) | PHAGE_Entero_mEp460: hypothetical protein; APECO1_2046; phage(gi428782351) | 2e-62 | Click |
10 | complement(5010406..5011098) | PHAGE_Entero_mEp460: prophage repressor; APECO1_2045; phage(gi428782354) | 3e-118 | Click |
11 | 5011196..5011456 | PHAGE_Entero_mEp460: putative antirepressor Cro; APECO1_2044; phage(gi428782355) | 2e-43 | Click |
12 | 5011449..5012000 | PHAGE_Entero_mEp460: hypothetical protein; APECO1_2043; phage(gi428782356) | 8e-102 | Click |
13 | 5011997..5013148 | PHAGE_Entero_mEp460: regulatory protein Rha; APECO1_2042; phage(gi428782357) | 0.0 | Click |
14 | 5013366..5014184 | PHAGE_Entero_mEp460: replication protein; APECO1_2041; phage(gi428782359) | 2e-155 | Click |
15 | 5014187..5014675 | PHAGE_Entero_mEp460: hypothetical protein; APECO1_2040; phage(gi428782360) | 7e-88 | Click |
16 | 5014642..5015001 | PHAGE_Entero_mEp460: LexA DNA binding domain protein; APECO1_2039; phage(gi428782362) | 2e-53 | Click |
17 | 5014998..5015387 | PHAGE_Entero_mEp460: holliday junction resolvase; APECO1_2038; phage(gi428782363) | 5e-70 | Click |
18 | 5015407..5015895 | PHAGE_Entero_mEp460: KilA-N domain protein; APECO1_2037; phage(gi428782364) | 9e-66 | Click |
19 | 5016207..5017202 | PHAGE_Entero_mEp460: hypothetical protein; APECO1_2036; phage(gi428782365) | 0.0 | Click |
20 | 5017174..5017968 | PHAGE_Entero_mEp460: late gene regulator; APECO1_2035; phage(gi428782366) | 5e-140 | Click |
21 | 5020085..5020636 | PHAGE_Entero_mEp460: hypothetical protein; APECO1_2034; phage(gi428782371) | 4e-35 | Click |
22 | 5020958..5021491 | PHAGE_Entero_mEp460: endolysin; lysozyme;; phage APECO1_2033(gi428782372) | 1e-97 | Click |
23 | 5021488..5021985 | PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; APECO1_2032; phage(gi16765210) | 2e-53 | Click |
24 | 5022794..5023063 | hypothetical protein; APECO1_2031 | N/A | Click |
25 | 5023628..5023641 | attR CTTTCACTCTTTCA | N/A | Click |
26 | 5024196..5024474 | hypothetical protein; APECO1_2030 | N/A | Click |
27 | 5024464..5024955 | PHAGE_Entero_mEp460: terminase small subunit; APECO1_2029; phage(gi428782317) | 5e-74 | Click |
28 | 5024955..5027057 | PHAGE_Entero_mEp460: terminase large subunit; APECO1_2028; phage(gi428782318) | 0.0 | Click |
29 | 5027194..5028774 | PHAGE_Entero_mEp460: portal protein; APECO1_2027; phage(gi428782320) | 0.0 | Click |
30 | 5028569..5030746 | PHAGE_Entero_mEp460: putative protease/scaffold protein; APECO1_2026; phage(gi428782321) | 0.0 | Click |
31 | 5030833..5031156 | PHAGE_Entero_mEp460: hypothetical protein; APECO1_2025; phage(gi428782322) | 4e-54 | Click |
32 | 5031149..5031424 | PHAGE_Entero_mEp460: hypothetical protein; APECO1_2024; phage(gi428782323) | 4e-47 | Click |
33 | 5031436..5032014 | PHAGE_Entero_mEp460: minor tail protein; APECO1_2023; phage(gi428782324) | 9e-104 | Click |
34 | 5032348..5033166 | PHAGE_Entero_mEp460: major tail protein; APECO1_2022; phage(gi428782326) | 2e-134 | Click |
35 | 5033215..5033613 | PHAGE_Entero_mEp460: minor tail protein; APECO1_2021; phage(gi428782327) | 7e-67 | Click |
36 | 5033622..5033951 | PHAGE_Entero_mEp460: tail assembly protein; APECO1_2020; phage(gi428782328) | 5e-59 | Click |
37 | 5033914..5036988 | PHAGE_Entero_mEp460: tail length tape measure protein; APECO1_2019; phage(gi428782329) | 0.0 | Click |
38 | 5036988..5037317 | PHAGE_Entero_mEp460: minor tail protein; APECO1_2018; phage(gi428782330) | 4e-61 | Click |
39 | 5037327..5038025 | PHAGE_Entero_mEp460: minor tail protein; APECO1_2017; phage(gi428782331) | 1e-134 | Click |
40 | 5038030..5038773 | PHAGE_Entero_mEp460: tail fiber component; APECO1_2016; phage(gi428782332) | 1e-145 | Click |
41 | 5038671..5039318 | PHAGE_Entero_mEp460: tail assembly protein; APECO1_2015; phage(gi428782333) | 2e-95 | Click |
42 | 5039379..5042774 | PHAGE_Entero_mEp460: host specificity protein; APECO1_2014; phage(gi428782334) | 0.0 | Click |
43 | 5042842..5043441 | PHAGE_Entero_mEp460: Lom protein; APECO1_2013; phage(gi428782335) | 8e-111 | Click |
44 | 5043500..5045884 | PHAGE_Entero_mEp460: side tail fiber protein; APECO1_2012; phage(gi428782336) | 4e-105 | Click |
45 | 5045884..5046165 | hypothetical protein; APECO1_2011 | N/A | Click |
46 | 5046175..5046879 | PHAGE_Marseillevirus: hypothetical protein MAR_ORF045; APECO1_2010; phage(gi284504080) | 7e-06 | Click |
47 | complement(5046970..5047323) | hypothetical protein; APECO1_2009 | N/A | Click |
48 | complement(5047411..5048001) | PHAGE_Escher_D108: G region invertase; site-specific; phage recombinase; APECO1_2008(gi281199698) | 8e-26 | Click |
49 | 5054487..5054499 | attR TACGCCGCATCCG | N/A | Click |