Definition Escherichia coli APEC O1, complete genome.
Accession NC_008563
Length 5,082,025
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 7 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 298716..298727  attL    TAATTAGTGAAG  N/A  Click
2 301931..302959  PHAGE_Pseudo_vB_PaeM_C2_10_Ab1: Major capsid protein; APECO1_1718; phage(gi431809985)  5e-10  Click
3 303266..305095  PHAGE_Entero_SPC35: pore-forming tail tip protein; APECO1_1717; phage(gi326633022)  7e-05  Click
4 305130..305843  PHAGE_Escher_phAPEC8: hypothetical protein; APECO1_1716; phage(gi448260431)  4e-61  Click
5 complement(305925..307259)  PHAGE_Helico_phiHP33: integrase/recombinase; APECO1_1715; phage(gi371671343)  9e-07  Click
6 complement(307569..307961)  integrase; APECO1_1714  N/A  Click
7 complement(308292..308816)  hypothetical protein; APECO1_1713  N/A  Click
8 complement(308942..313072)  PHAGE_Synech_metaG_MbCM1: phage tail fiber-like protein; APECO1_1712; phage(gi418487249)  1e-08  Click
9 316507..316518  attR    TAATTAGTGAAG  N/A  Click
Region 2, total : 39 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(918973..919770)  PHAGE_Entero_T4: NrdG anaerobic NTP reductase, small subunit; APECO1_1190; phage(gi9632803)  6e-07  Click
2 919699..919711  attL    ACCAATAACTGAC  N/A  Click
3 complement(919802..920797)  PHAGE_Yersin_413C: Int; APECO1_1189; phage(gi30065733)  1e-101  Click
4 complement(920891..921202)  PHAGE_Yersin_413C: gpC; APECO1_1188; phage(gi30065734)  5e-13  Click
5 921307..921663  PHAGE_Entero_P2: Cox; APECO1_4460; phage(gi9630359)  9e-05  Click
6 921835..922341  PHAGE_Yersin_413C: gpB; APECO1_4461; phage(gi30065737)  7e-93  Click
7 922629..922928  PHAGE_Yersin_413C: hypothetical protein L-413Cp35; APECO1_4462; phage(gi30065739)  8e-49  Click
8 923152..923427  PHAGE_Yersin_413C: hypothetical protein L-413Cp37; APECO1_4463; phage(gi30065741)  1e-46  Click
9 923417..925708  PHAGE_Yersin_413C: gpA; APECO1_4464; phage(gi30065742)  0.0  Click
10 complement(925932..928148)  PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; APECO1_4465; phage(gi9631364)  2e-07  Click
11 complement(928652..929686)  PHAGE_Yersin_413C: gpQ; APECO1_4466; phage(gi30065705)  0.0  Click
12 complement(929686..931458)  PHAGE_Yersin_413C: gpP; APECO1_4467; phage(gi30065706)  0.0  Click
13 931566..932486  PHAGE_Yersin_413C: gpO; APECO1_4468; phage(gi30065707)  7e-159  Click
14 932545..933618  PHAGE_Yersin_413C: gpN; APECO1_4469; phage(gi30065708)  0.0  Click
15 933622..934365  PHAGE_Yersin_413C: gpM; APECO1_4470; phage(gi30065709)  6e-136  Click
16 934405..934974  PHAGE_Yersin_413C: gpL; APECO1_4471; phage(gi30065710)  3e-92  Click
17 935181..935462  PHAGE_Yersin_413C: gpY; APECO1_4472; phage(gi30065712)  2e-45  Click
18 935462..935959  PHAGE_Yersin_413C: gpK; APECO1_4473; phage(gi30065713)  3e-94  Click
19 935974..936399  PHAGE_Yersin_413C: LysA; APECO1_4474; phage(gi30065714)  3e-67  Click
20 936387..936812  PHAGE_Yersin_413C: LysB; APECO1_4475; phage(gi30065715)  1e-68  Click
21 936920..937387  PHAGE_Yersin_413C: gpR; APECO1_4476; phage(gi30065716)  3e-82  Click
22 937380..937832  PHAGE_Yersin_413C: gpS; APECO1_4477; phage(gi30065717)  4e-80  Click
23 937899..938534  PHAGE_Yersin_413C: gpV; APECO1_4478; phage(gi30065718)  3e-117  Click
24 938531..938878  PHAGE_Yersin_413C: gpW; APECO1_4479; phage(gi30065719)  1e-60  Click
25 938883..939791  PHAGE_Yersin_413C: gpJ; APECO1_4480; phage(gi30065720)  6e-166  Click
26 939784..940314  PHAGE_Yersin_413C: gpI; APECO1_4481; phage(gi30065721)  5e-92  Click
27 940325..942334  PHAGE_Yersin_413C: gpH; APECO1_4482; phage(gi30065722)  2e-95  Click
28 942338..942865  PHAGE_Yersin_413C: gpG; APECO1_44822; phage(gi30065723)  5e-95  Click
29 complement(943266..944852)  PHAGE_Entero_P2: Fun(Z); APECO1_1; phage(gi9630348)  0.0  Click
30 945243..945659  PHAGE_Yersin_413C: gpFI; APECO1_5; phage(gi30065725)  7e-63  Click
31 945800..946996  hypothetical protein; APECO1_6  N/A  Click
32 947354..948103  PROPHAGE_Escher_CFT073: transposase/IS protein; APECO1_7; phage(gi26248359)  1e-22  Click
33 948154..949020  PHAGE_Yersin_413C: gpFI; APECO1_8; phage(gi30065725)  1e-152  Click
34 949033..949551  PHAGE_Yersin_413C: FII; APECO1_9; phage(gi30065726)  6e-93  Click
35 complement(949563..949952)  hypothetical protein; APECO1_10  N/A  Click
36 950028..952475  PHAGE_Yersin_413C: gpT; APECO1_11; phage(gi30065729)  0.0  Click
37 952490..952969  PHAGE_Yersin_413C: gpU; APECO1_12; phage(gi30065730)  9e-87  Click
38 952969..954132  PHAGE_Yersin_413C: gpD; APECO1_13; phage(gi30065731)  0.0  Click
39 954178..954432  PHAGE_Yersin_413C: Ogr; APECO1_14; phage(gi30065732)  2e-45  Click
40 954545..954557  attR    ACCAATAACTGAC  N/A  Click
41 complement(954751..957033)  PHAGE_Klebsi_KP27: hypothetical protein; APECO1_15; phage(gi448260626)  1e-22  Click
Region 3, total : 54 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1178745..1178792  attL    CTACATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTT  N/A  Click
2 complement(1178855..1179997)  PHAGE_Entero_mEp235: integrase; APECO1_219; phage(gi428781836)  2e-61  Click
3 1180553..1180984  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip085; APECO1_220; phage(gi20065880)  2e-43  Click
4 complement(1181863..1182543)  PHAGE_Stx2_c_1717: exonuclease; APECO1_221; phage(gi209447136)  1e-132  Click
5 complement(1182540..1183325)  PHAGE_Entero_lambda: bet; APECO1_222; phage(gi9626281)  7e-151  Click
6 complement(1183331..1183627)  PHAGE_Stx2_c_86: host-nuclease inhibitor protein Gam; APECO1_223; phage(gi116222045)  8e-52  Click
7 complement(1183703..1183972)  PHAGE_Stx2_c_86: putative host killing protein Kil; APECO1_224; phage(gi116222047)  3e-44  Click
8 complement(1184052..1184420)  PHAGE_Entero_lambda: Putative single-stranded DNA binding protein; APECO1_225; phage(gi9626285)  2e-68  Click
9 1185017..1185598  PHAGE_Entero_HK140: superinfection exclusion protein; APECO1_226; phage(gi428781984)  1e-101  Click
10 complement(1185615..1185959)  PHAGE_Stx2_c_1717: N protein; APECO1_227; phage(gi209447143)  2e-58  Click
11 complement(1186324..1187076)  PHAGE_Burkho_2: gp47, conserved hypothetical protein; APECO1_228; phage(gi134288670)  6e-06  Click
12 complement(1187073..1187513)  hypothetical protein; APECO1_229  N/A  Click
13 complement(1187670..1188365)  PHAGE_Stx2_c_II: CI protein; APECO1_230; phage(gi302393138)  8e-135  Click
14 1188371..1188655  PHAGE_Stx2_c_II: Cro protein; APECO1_231; phage(gi302393139)  2e-36  Click
15 1188797..1189093  PHAGE_Entero_Min27: regulatory protein CII; APECO1_232; phage(gi170783637)  2e-46  Click
16 1189126..1190025  PHAGE_Entero_lambda: DNA replication protein; APECO1_233; phage(gi9626295)  3e-174  Click
17 1190022..1190723  PHAGE_Entero_lambda: DNA replication protein; APECO1_234; phage(gi9626296)  6e-128  Click
18 1190720..1191010  PHAGE_Entero_lambda: ren exclusion protein; APECO1_235; phage(gi9626297)  1e-48  Click
19 1191084..1191524  PHAGE_Entero_lambda: NinB; APECO1_236; phage(gi9626298)  9e-82  Click
20 1191461..1192048  PHAGE_Entero_c_1: DNA N-6-adenine-methyltransferase; APECO1_237; phage(gi428781789)  8e-105  Click
21 1192182..1192565  PHAGE_Salmon_ST160: NinX; APECO1_238; phage(gi318065936)  9e-64  Click
22 1192772..1193134  PHAGE_Entero_mEp237: Holliday junction resolvase RusA; APECO1_239; phage(gi435439318)  5e-62  Click
23 1193357..1193740  PHAGE_Entero_2008: antitermination protein Q; APECO1_240; phage(gi209427762)  2e-56  Click
24 complement(1193929..1195071)  outer membrane porin protein NmpC precursor; APECO1_241  N/A  Click
25 1195815..1196312  PHAGE_Entero_cdtI: lysin; APECO1_242; phage(gi148609440)  2e-91  Click
26 1196297..1196770  PHAGE_Entero_lambda: cell lysis protein; APECO1_243; phage(gi9626310)  8e-80  Click
27 complement(1196802..1197110)  PHAGE_Entero_lambda: Bor protein precursor; APECO1_244; phage(gi19263395)  4e-47  Click
28 1197522..1197902  truncated TonB-like membrane protein encoded within prophage; APECO1_245  N/A  Click
29 complement(1198025..1198378)  hypothetical protein; APECO1_246  N/A  Click
30 1198763..1199311  PHAGE_Gifsy_1: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; APECO1_247; phage(gi169257236)  3e-65  Click
31 1199241..1201211  PHAGE_Entero_lambda: DNA packaging protein; terminase; phage large subunit; APECO1_248(gi9626245)  0.0  Click
32 1201368..1202990  PHAGE_Gifsy_1: bacteriophage portal protein; Lambda gpB homolog; APECO1_249; phage(gi169257233)  0.0  Click
33 1202980..1204485  PHAGE_Entero_lambda: capsid component; APECO1_250; phage(gi9626248)  2e-107  Click
34 complement(1204501..1204872)  hypothetical protein; APECO1_251  N/A  Click
35 1204927..1205955  PHAGE_Entero_lambda: capsid component; APECO1_252; phage(gi9626251)  1e-116  Click
36 1205959..1206381  PHAGE_Entero_HK225: head assembly protein Fi; APECO1_253; phage(gi428782384)  1e-07  Click
37 1206338..1206727  PHAGE_Entero_lambda: head-tail joining protein; APECO1_254; phage(gi9626253)  9e-40  Click
38 1206739..1207317  PHAGE_Entero_lambda: tail component; APECO1_255; phage(gi9626254)  2e-100  Click
39 1207314..1207709  PHAGE_Entero_lambda: tail component; APECO1_256; phage(gi9626255)  1e-70  Click
40 1207687..1208457  PHAGE_Entero_lambda: tail component; APECO1_257; phage(gi9626256)  2e-133  Click
41 1208473..1208895  PHAGE_Entero_lambda: tail component; APECO1_258; phage(gi9626257)  1e-69  Click
42 1208877..1209311  PHAGE_Entero_lambda: tail component; APECO1_259; phage(gi9626258)  8e-78  Click
43 1209304..1211865  PHAGE_Entero_lambda: tail component; APECO1_260; phage(gi9626259)  0.0  Click
44 1211862..1212191  PHAGE_Entero_lambda: tail component; APECO1_261; phage(gi9626260)  6e-54  Click
45 1212191..1212889  PHAGE_Entero_lambda: tail component; APECO1_262; phage(gi9626261)  8e-133  Click
46 1212895..1213638  PHAGE_Entero_mEp460: tail fiber component; APECO1_263; phage(gi428782332)  7e-148  Click
47 1213536..1214207  PHAGE_Entero_lambda: tail component; APECO1_265; phage(gi9626263)  3e-121  Click
48 1214268..1217018  PHAGE_Entero_lambda: tail:host specificity protein; APECO1_266; phage(gi9626264)  0.0  Click
49 1216993..1217751  PHAGE_Stx2_c_1717: putative tail fiber component J; APECO1_267; phage(gi209447196)  2e-120  Click
50 1217804..1219870  PHAGE_Escher_bV_EcoS_AKFV33: putative tail fiber protein; APECO1_268; phage(gi388570497)  5e-80  Click
51 1219867..1220145  PHAGE_Escher_bV_EcoS_AKFV33: hypothetical protein; APECO1_269; phage(gi388570496)  8e-06  Click
52 1220158..1220451  PHAGE_Halomo_1: hypothetical protein HAPgp19; APECO1_270; phage(gi167832364)  2e-07  Click
53 complement(1220543..1221400)  Mn+2/Fe+2 ABC transporter inner membrane subunit SitD; APECO1_271  N/A  Click
54 complement(1221397..1222254)  Mn+2/Fe+2 ABC transporter inner membrane subunit SitC; APECO1_272  N/A  Click
55 complement(1222251..1223078)  PHAGE_Plankt_PaV_LD: ABC transporter; APECO1_273; phage(gi371496158)  2e-13  Click
56 1226077..1226124  attR    CTACATGTGTTAAATATTGAAACGGGCGTATAACACGCCCGTTGTTTT  N/A  Click
Region 4, total : 32 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1338692..1339099  PHAGE_Cronob_phiES15: hypothetical protein; APECO1_384; phage(gi401817580)  2e-13  Click
2 1339101..1340147  PHAGE_Entero_mEp460: hypothetical protein; APECO1_385; phage(gi428782365)  5e-111  Click
3 1340160..1340534  PHAGE_Escher_HK75: RusA-like protein; APECO1_386; phage(gi356870726)  1e-35  Click
4 1340531..1341352  PHAGE_Entero_HK225: late gene regulator Q; APECO1_387; phage(gi428782441)  2e-90  Click
5 1341925..1342974  PHAGE_Entero_phiP27: putative DNA methylase; APECO1_388; phage(gi18249888)  0.0  Click
6 1343024..1343096  tRNA  N/A  Click
7 1343197..1343270  tRNA  N/A  Click
8 1344156..1344476  PHAGE_Escher_P13374: lysis protein, holin; APECO1_389; phage(gi410491645)  7e-43  Click
9 1344481..1344825  PHAGE_Entero_mEp460: hypothetical protein; APECO1_390; phage(gi428782371)  7e-39  Click
10 complement(1344791..1345063)  hypothetical protein; APECO1_391  N/A  Click
11 1345263..1345703  PHAGE_Stx2_c_86: lysozyme protein R; APECO1_392; phage(gi116221999)  4e-72  Click
12 complement(1345646..1345933)  hypothetical protein; APECO1_393  N/A  Click
13 1346002..1346466  PHAGE_Entero_HK630: cell lysis protein Rz; APECO1_394; phage(gi428782852)  1e-66  Click
14 complement(1346774..1347199)  PHAGE_Entero_HK630: hypothetical protein; APECO1_395; phage(gi428782855)  6e-56  Click
15 1347623..1348411  PHAGE_Entero_HK630: terminase small subunit nu1; APECO1_396; phage(gi428782788)  9e-51  Click
16 1348341..1350311  PHAGE_Entero_HK630: terminase large subunit A; terminase; phage large subunit; APECO1_397(gi428782789)  0.0  Click
17 1350498..1352090  PHAGE_Entero_HK630: portal protein B; APECO1_398; phage(gi428782791)  0.0  Click
18 1352080..1353585  PHAGE_Entero_HK630: head maturation protease C; APECO1_399; phage(gi428782792)  1e-107  Click
19 complement(1353601..1353972)  hypothetical protein; APECO1_400  N/A  Click
20 1354027..1355055  PHAGE_Entero_HK630: major head subunit E; APECO1_401; phage(gi428782795)  1e-114  Click
21 1355059..1355490  PHAGE_Gifsy_1: bacteriophage accessory DNA packaging protein; Lambda FI homolog; APECO1_402; phage(gi169257229)  4e-12  Click
22 1355483..1355836  PHAGE_Entero_HK630: head-tail connector Fii; APECO1_403; phage(gi428782797)  5e-43  Click
23 1355852..1356385  PHAGE_Entero_HK630: minor tail protein Z; APECO1_404; phage(gi428782798)  2e-66  Click
24 1356382..1356777  PHAGE_Entero_HK630: minor tail protein U; APECO1_405; phage(gi428782799)  8e-59  Click
25 complement(1356878..1358212)  hypothetical protein; APECO1_406  N/A  Click
26 1358403..1360976  PHAGE_Entero_HK630: tail length tape measure protein H; APECO1_407; phage(gi428782803)  0.0  Click
27 1360973..1361302  PHAGE_Entero_HK630: minor tail protein M; APECO1_408; phage(gi428782804)  4e-52  Click
28 1361302..1362000  PHAGE_Entero_HK630: minor tail protein L; APECO1_409; phage(gi428782805)  2e-131  Click
29 1362005..1362748  PHAGE_Entero_mEp460: tail fiber component; APECO1_410; phage(gi428782332)  1e-145  Click
30 1362646..1363287  PHAGE_Entero_HK630: tail component I; APECO1_411; phage(gi428782807)  8e-96  Click
31 1363361..1363699  hypothetical protein; APECO1_412  N/A  Click
32 1363766..1367245  PHAGE_Entero_HK630: tail fiber J; APECO1_413; phage(gi428782808)  0.0  Click
33 1367313..1367912  PHAGE_Entero_cdtI: putative Lom-like outer membrane protein; APECO1_414; phage(gi148609401)  2e-107  Click
34 1368064..1371171  PHAGE_Entero_mEp460: side tail fiber protein; APECO1_415; phage(gi428782336)  3e-141  Click
Region 5, total : 39 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1467056..1467069  attL    GGGCAAACTTTGCA  N/A  Click
2 1481483..1482082  PHAGE_Entero_mEp237: hypothetical protein; APECO1_511; phage(gi435439315)  9e-54  Click
3 1482249..1482905  PHAGE_Salmon_vB_SosS_Oslo: antitermination protein Q; APECO1_512; phage(gi399528832)  3e-06  Click
4 1483268..1483340  tRNA  N/A  Click
5 1483347..1483418  tRNA  N/A  Click
6 1484111..1484413  PHAGE_Entero_cdtI: lysis protein; APECO1_513; phage(gi148609439)  2e-35  Click
7 1484413..1484910  PHAGE_Entero_cdtI: lysin; APECO1_514; phage(gi148609440)  5e-92  Click
8 1484895..1485371  PHAGE_Entero_cdtI: lysin; APECO1_515; phage(gi148609441)  4e-58  Click
9 1485509..1486966  Rac prophage; potassium transporter subunit; APECO1_516  N/A  Click
10 1487104..1487895  PHAGE_Lactob_c5: putative ParB nuclease; APECO1_517; phage(gi418488153)  6e-50  Click
11 1487867..1488820  PHAGE_Lactob_c5: hypothetical protein; APECO1_518; phage(gi418488154)  2e-51  Click
12 1488756..1489007  hypothetical protein; APECO1_519  N/A  Click
13 1489347..1490105  PHAGE_Burkho_Bcep22: Bcep22gp36; APECO1_520; phage(gi158997725)  1e-27  Click
14 1490077..1491387  PHAGE_Pseudo_H105/1: phage terminase large subunit; APECO1_521; phage(gi327198525)  7e-111  Click
15 1491390..1492796  PHAGE_Escher_HK639: hypothetical protein; APECO1_522; phage(gi356870603)  0.0  Click
16 1492777..1493892  PHAGE_Pseudo_MP1412: head morphogenesis/minor structural protein; APECO1_523; phage(gi399529016)  3e-56  Click
17 1493925..1494761  PHAGE_Escher_HK639: hypothetical protein; APECO1_524; phage(gi356870605)  5e-90  Click
18 1494791..1495999  PHAGE_Vibrio_vB_VpaS_MAR10: major capsid protein; APECO1_525; phage(gi428782119)  2e-34  Click
19 1496270..1496665  hypothetical protein; APECO1_526  N/A  Click
20 1496662..1497048  PHAGE_Acinet_Bphi_B1251: hypothetical protein; APECO1_527; phage(gi423262010)  3e-15  Click
21 1497049..1497429  PHAGE_Salmon_SE2: hypothetical protein; APECO1_528; phage(gi375267267)  6e-14  Click
22 1497426..1497818  PHAGE_Acinet_Bphi_B1251: hypothetical protein; APECO1_529; phage(gi423262013)  3e-10  Click
23 1497845..1498807  PHAGE_Xantho_Xp15: possible phage minor tail protein; APECO1_530; phage(gi66392066)  5e-06  Click
24 1498856..1499317  Rac prophage hypothetical protein; APECO1_531  N/A  Click
25 1499789..1503022  PHAGE_Entero_cdtI: putative tail protein; tail; phage protein; APECO1_532(gi148609395)  4e-102  Click
26 1503015..1503353  PHAGE_Entero_4795: putative minor tail protein; APECO1_533; phage(gi157166053)  4e-29  Click
27 1503353..1504051  PHAGE_Entero_cdtI: putative minor tail protein; APECO1_5332; phage(gi148609397)  1e-134  Click
28 1504056..1504799  PHAGE_Entero_cdtI: putative tail protein; APECO1_534; phage(gi148609398)  2e-146  Click
29 1504697..1505344  PHAGE_Entero_cdtI: putative tail component; APECO1_535; phage(gi148609399)  1e-114  Click
30 1505405..1508803  PHAGE_Entero_cdtI: putative tail tip assembly protein; APECO1_536; phage(gi148609400)  0.0  Click
31 1508871..1509470  PHAGE_Entero_cdtI: putative Lom-like outer membrane protein; APECO1_537; phage(gi148609401)  1e-103  Click
32 1509529..1511910  PHAGE_Escher_bV_EcoS_AKFV33: putative tail fiber protein; APECO1_538; phage(gi388570497)  2e-108  Click
33 1511910..1512191  hypothetical protein; APECO1_539  N/A  Click
34 1512201..1512905  PHAGE_Marseillevirus: hypothetical protein MAR_ORF045; APECO1_540; phage(gi284504080)  3e-05  Click
35 1512916..1513206  PHAGE_Halomo_1: hypothetical protein HAPgp19; APECO1_541; phage(gi167832364)  2e-07  Click
36 1513719..1514432  PHAGE_Entero_cdtI: Cytolethal distending toxin A subunit; APECO1_542; phage(gi148609409)  3e-134  Click
37 1514429..1515250  PHAGE_Entero_cdtI: Cytolethal distending toxin B subunit; APECO1_543; phage(gi148609410)  1e-149  Click
38 1515247..1515819  PHAGE_Entero_cdtI: Cytolethal distending toxin C subunit; APECO1_544; phage(gi148609411)  3e-92  Click
39 complement(1515889..1517373)  hypothetical protein; APECO1_545  N/A  Click
40 complement(1517558..1518508)  outer membrane protease; APECO1_546  N/A  Click
41 complement(1518815..1519165)  hypothetical protein; APECO1_547  N/A  Click
42 1519383..1519396  attR    GGGCAAACTTTGCA  N/A  Click
43 complement(1519398..1519706)  PHAGE_Entero_phiP27: putative integrase; APECO1_548; phage(gi18249865)  1e-25  Click
Region 6, total : 44 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2046665..2046676  attL    CTCCCTGACAGA  N/A  Click
2 2046720..2046732  attL    ATGGCTTATGAAA  N/A  Click
3 complement(2052150..2052428)  PHAGE_Escher_bV_EcoS_AKFV33: hypothetical protein; APECO1_1012; phage(gi388570496)  8e-06  Click
4 complement(2052425..2054491)  PHAGE_Entero_mEp460: side tail fiber protein; APECO1_6001; phage(gi428782336)  3e-77  Click
5 complement(2054544..2058026)  PHAGE_Entero_mEp460: host specificity protein; APECO1_6002; phage(gi428782334)  0.0  Click
6 complement(2058087..2058758)  PHAGE_Entero_HK630: tail component I; APECO1_6003; phage(gi428782807)  3e-121  Click
7 complement(2058656..2059399)  PHAGE_Entero_mEp460: tail fiber component; APECO1_6004; phage(gi428782332)  8e-144  Click
8 2059398..2060108  hypothetical protein; APECO1_6005  N/A  Click
9 complement(2060102..2060443)  PHAGE_Entero_mEp460: minor tail protein; APECO1_6006; phage(gi428782330)  3e-23  Click
10 complement(2060436..2063681)  PHAGE_Stx2_c_1717: tail tape measure protein; APECO1_6007; phage(gi209447190)  0.0  Click
11 complement(2063722..2064012)  PHAGE_Entero_HK544: tail protein; APECO1_1015; phage(gi428783227)  6e-30  Click
12 complement(2064024..2064410)  PHAGE_Stx2_c_1717: putative tail assembly chaperone; APECO1_1016; phage(gi209447188)  2e-42  Click
13 complement(2064410..2065165)  PHAGE_Entero_mEp234: major tail subunit; APECO1_1017; phage(gi428782264)  5e-95  Click
14 complement(2065174..2065518)  PHAGE_Cronob_ENT39118: putative minor tail protein; APECO1_1018; phage(gi431811079)  4e-32  Click
15 complement(2065515..2065964)  PHAGE_Entero_HK97: Gp10; APECO1_1019; phage(gi9634169)  1e-64  Click
16 complement(2065961..2066299)  PHAGE_Entero_HK97: putative head-tail adaptor; APECO1_1020; phage(gi9634168)  3e-33  Click
17 complement(2066308..2066796)  PHAGE_Entero_mEp235: head-tail connector II; APECO1_1021; phage(gi428781817)  6e-17  Click
18 complement(2066702..2067919)  PHAGE_Entero_SfV: capsid; APECO1_1022; phage(gi19548995)  9e-161  Click
19 complement(2067934..2068533)  PHAGE_Entero_SfV: capsid protease; APECO1_1023; phage(gi19548994)  1e-90  Click
20 complement(2068526..2069752)  PHAGE_Entero_SfV: portal protein; APECO1_1024; phage(gi19548993)  0.0  Click
21 complement(2069900..2071657)  PHAGE_Entero_mEp235: terminase large subunit; APECO1_1025; phage(gi428781812)  0.0  Click
22 complement(2071657..2072139)  PHAGE_Entero_mEp235: terminase small subunit; APECO1_1026; phage(gi428781811)  3e-65  Click
23 complement(2072287..2072637)  PHAGE_Entero_phiP27: hypothetical protein P27p34; APECO1_1027; phage(gi18249898)  4e-60  Click
24 complement(2072680..2073147)  PHAGE_Entero_cdtI: lysin; APECO1_1028; phage(gi148609441)  2e-73  Click
25 complement(2073144..2073677)  PHAGE_Entero_mEp460: endolysin; APECO1_1029; phage(gi428782372)  9e-100  Click
26 complement(2073741..2074091)  PHAGE_Entero_mEp460: hypothetical protein; APECO1_1030; phage(gi428782371)  3e-39  Click
27 complement(2074608..2074679)  tRNA  N/A  Click
28 complement(2074686..2074758)  tRNA  N/A  Click
29 complement(2074761..2074837)  tRNA  N/A  Click
30 complement(2074842..2074914)  tRNA  N/A  Click
31 complement(2075039..2075752)  hypothetical protein; APECO1_1031  N/A  Click
32 complement(2075982..2076677)  PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; APECO1_1032; phage(gi169257244)  1e-79  Click
33 complement(2076668..2077033)  PHAGE_Escher_HK75: RusA-like protein; APECO1_1033; phage(gi356870726)  1e-39  Click
34 complement(2077034..2078089)  PHAGE_Entero_mEp460: hypothetical protein; APECO1_1034; phage(gi428782365)  6e-91  Click
35 complement(2079275..2079790)  PHAGE_Salmon_ST64B: hypothetical protein sb32; APECO1_1035; phage(gi23505476)  4e-11  Click
36 complement(2080232..2080621)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip073; APECO1_1036; phage(gi20065868)  3e-08  Click
37 complement(2080590..2080901)  PHAGE_Escher_P13374: hypothetical protein; APECO1_1037; phage(gi410491609)  5e-07  Click
38 complement(2080917..2081324)  hypothetical protein; APECO1_1038  N/A  Click
39 complement(2081365..2082441)  PHAGE_Entero_mEp460: replication protein; APECO1_1040; phage(gi428782359)  6e-28  Click
40 complement(2082507..2082932)  PHAGE_Pectob_ZF40: putative cII repressor; APECO1_1041; phage(gi422936652)  1e-05  Click
41 complement(2082929..2083255)  PHAGE_Escher_HK75: regulatory protein cro; APECO1_1042; phage(gi356870715)  2e-18  Click
42 2083263..2083682  PHAGE_Entero_HK022: regulatory protein cI; APECO1_1043; phage(gi19343388)  3e-21  Click
43 2083983..2084339  hypothetical protein; APECO1_1044  N/A  Click
44 complement(2084633..2084926)  hypothetical protein; APECO1_1045  N/A  Click
45 complement(2085001..2085333)  hypothetical protein; APECO1_1046  N/A  Click
46 2085328..2085585  hypothetical protein; APECO1_1047  N/A  Click
47 2085665..2088136  PHAGE_Entero_mEp460: putative exonuclease; APECO1_1048; phage(gi428782342)  7e-59  Click
48 2088398..2089423  PHAGE_Salmon_ST64B: Integrase protein; APECO1_1049; phage(gi23505472)  1e-104  Click
49 complement(2089479..2089565)  tRNA  N/A  Click
50 2089620..2090456  hypothetical protein; APECO1_1050  N/A  Click
51 2090490..2090502  attR    ATGGCTTATGAAA  N/A  Click
52 2090557..2090629  tRNA  N/A  Click
53 2091013..2091975  PROPHAGE_Escher_CFT073: prophage P4 integrase; APECO1_1051; phage(gi26248270)  0.0  Click
54 2099597..2099608  attR    CTCCCTGACAGA  N/A  Click
Region 7, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2259304..2259318  attL    CATTGACCACATCGA  N/A  Click
2 2272731..2273765  PHAGE_Yersin_413C: gpQ; APECO1_1181; phage(gi30065705)  0.0  Click
3 2274092..2275141  hypothetical protein; APECO1_1182  N/A  Click
4 2275134..2276417  hypothetical protein; APECO1_1183  N/A  Click
5 complement(2276593..2278848)  PHAGE_Yersin_413C: gpA; APECO1_1184; phage(gi30065742)  0.0  Click
6 complement(2279337..2279636)  PHAGE_Yersin_413C: hypothetical protein L-413Cp35; APECO1_1185; phage(gi30065739)  2e-48  Click
7 complement(2279924..2280430)  PHAGE_Yersin_413C: gpB; APECO1_1186; phage(gi30065737)  6e-92  Click
8 2280992..2281291  PHAGE_Yersin_413C: gpC; APECO1_4459; phage(gi30065734)  3e-18  Click
9 2281407..2282420  PHAGE_Yersin_413C: Int; APECO1_4458; phage(gi30065733)  1e-91  Click
10 2282559..2282573  attR    CATTGACCACATCGA  N/A  Click
Region 8, total : 47 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2570047..2570063  attL    CTGCAGGGGACACCATT  N/A  Click
2 2570223..2571380  PHAGE_Entero_IME10: integrase; APECO1_4218; phage(gi422934296)  0.0  Click
3 complement(2571620..2572543)  PHAGE_Emilia_86: hypothetical protein EhV247; APECO1_4217; phage(gi73852718)  3e-07  Click
4 complement(2572697..2575642)  PHAGE_Escher_phAPEC8: tail fiber protein; APECO1_4216; phage(gi448260439)  0.0  Click
5 complement(2575743..2576645)  PHAGE_Salmon_epsilon34: Ant; APECO1_4215; phage(gi221328691)  4e-169  Click
6 2577393..2577929  PHAGE_Strept_1: head maturation protease; APECO1_4214; phage(gi28876177)  4e-07  Click
7 complement(2577978..2578427)  PHAGE_Escher_HK639: hypothetical protein; APECO1_4213; phage(gi356870618)  7e-46  Click
8 complement(2578436..2579002)  PHAGE_Escher_HK639: hypothetical protein; APECO1_4212; phage(gi356870617)  1e-25  Click
9 2579199..2579528  hypothetical protein; APECO1_42112  N/A  Click
10 complement(2579546..2581561)  PHAGE_Entero_P22: injection protein; APECO1_4211; phage(gi51236731)  7e-65  Click
11 complement(2581558..2583009)  PHAGE_Entero_P22: injection protein; APECO1_4210; phage(gi9635545)  4e-160  Click
12 complement(2583020..2583712)  PHAGE_Salmon_vB_SemP_Emek: injection protein; APECO1_4209; phage(gi399498802)  4e-118  Click
13 complement(2583715..2584170)  PHAGE_Entero_IME10: head assembly protein; APECO1_4208; phage(gi422934287)  3e-87  Click
14 complement(2584170..2584871)  PHAGE_Entero_IME10: DNA stabilization protein; APECO1_4207; phage(gi422934286)  2e-120  Click
15 complement(2584871..2586289)  PHAGE_Entero_IME10: DNA stabilization protein; APECO1_4206; phage(gi422934285)  0.0  Click
16 complement(2586299..2586760)  PHAGE_Sodali_phiSG1: phage DNA stabilization protein; APECO1_4205; phage(gi89885996)  2e-27  Click
17 complement(2586971..2588224)  PHAGE_Entero_P22: coat protein; APECO1_4204; phage(gi9635538)  2e-34  Click
18 complement(2588243..2589136)  PHAGE_Entero_Sf6: gene 4 protein; APECO1_4203; phage(gi41057282)  1e-28  Click
19 complement(2589227..2591425)  PHAGE_Bacter_2: portal protein; APECO1_4202; phage(gi212499722)  0.0  Click
20 complement(2591427..2592842)  PHAGE_Entero_Sf6: gene 2 protein; APECO1_4201; phage(gi41057280)  0.0  Click
21 complement(2592839..2593279)  PHAGE_Riemer_RAP44: hypothetical protein; APECO1_4200; phage(gi418489899)  6e-30  Click
22 complement(2593282..2593524)  PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; APECO1_4199; phage(gi399498861)  6e-39  Click
23 complement(2593752..2594363)  PHAGE_Escher_P13374: regulatory protein; APECO1_4198; phage(gi410491650)  6e-61  Click
24 complement(2594640..2595077)  PHAGE_Entero_Sf6: gene 63 protein; APECO1_4197; phage(gi41057336)  2e-75  Click
25 complement(2595074..2595550)  PHAGE_Entero_HK140: lysin; APECO1_4196; phage(gi428782005)  1e-89  Click
26 complement(2595534..2595857)  PHAGE_Entero_IME10: holin; APECO1_4195; phage(gi422934276)  1e-55  Click
27 complement(2596454..2596972)  PHAGE_Salmon_ST160: Gp23; APECO1_4194; phage(gi318065942)  2e-96  Click
28 complement(2597154..2597516)  PHAGE_Escher_HK75: RusA-like protein; APECO1_4193; phage(gi356870726)  8e-65  Click
29 complement(2597513..2597803)  PHAGE_Salmon_SPN9CC: hypothetical protein; APECO1_4192; phage(gi389060524)  7e-53  Click
30 complement(2597803..2598525)  PHAGE_Entero_HK140: DNA-binding protein; APECO1_4191; phage(gi428781998)  3e-131  Click
31 complement(2598687..2599112)  PHAGE_Entero_HK446: NinX protein; APECO1_4190; phage(gi428782242)  6e-16  Click
32 complement(2599282..2599542)  PHAGE_Escher_HK75: NinB; APECO1_4189; phage(gi356870721)  1e-42  Click
33 complement(2599892..2600206)  PHAGE_Entero_Sf6: gene 48 protein; APECO1_4188; phage(gi41057325)  2e-25  Click
34 complement(2600601..2601977)  PHAGE_Entero_mEp213: replicative DNA helicase; APECO1_4187; phage(gi428782646)  0.0  Click
35 complement(2601974..2602921)  PHAGE_Salmon_SPN9CC: bacteriophage replication protein O; APECO1_4186; phage(gi389060512)  6e-68  Click
36 complement(2602924..2603196)  hypothetical protein; APECO1_4185  N/A  Click
37 complement(2603219..2603599)  PHAGE_Entero_IME10: cII; APECO1_4184; phage(gi422934270)  8e-36  Click
38 2603887..2604537  PHAGE_Entero_IME10: repressor protein; APECO1_4183; phage(gi422934295)  4e-124  Click
39 complement(2604659..2604955)  hypothetical protein; APECO1_4182  N/A  Click
40 2605060..2605359  PHAGE_Entero_mEp213: antitermination protein N; APECO1_4180; phage(gi428782636)  3e-28  Click
41 2605368..2605838  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip113; APECO1_4179; phage(gi20065908)  1e-90  Click
42 2606460..2607065  PHAGE_Entero_mEp234: essential recombination function protein; APECO1_4178; phage(gi428782283)  8e-111  Click
43 2607065..2607448  PHAGE_Entero_mEp213: hypothetical protein; APECO1_4177; phage(gi428782627)  2e-68  Click
44 2607472..2607768  PHAGE_Entero_mEp235: Abc2 protein; APECO1_4176; phage(gi428781839)  1e-54  Click
45 complement(2607817..2608503)  hypothetical protein; APECO1_4175  N/A  Click
46 2608679..2609251  PHAGE_Entero_ST104: ORF8; APECO1_4174; phage(gi46358656)  9e-48  Click
47 complement(2609618..2609953)  hypothetical protein; APECO1_4173  N/A  Click
48 2610385..2610401  attR    CTGCAGGGGACACCATT  N/A  Click
49 complement(2610499..2611434)  PHAGE_Burkho_phi1026b: gp58; APECO1_4172; phage(gi38707948)  4e-16  Click
Region 9, total : 46 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2738153..2738671  PHAGE_Escher_TL_2011b: putative outer membrane lipoprotein; APECO1_4064; phage(gi418487638)  3e-93  Click
2 2738687..2739226  PHAGE_Escher_TL_2011b: hypothetical protein; APECO1_4063; phage(gi418487682)  3e-95  Click
3 2739318..2739334  attL    AATCATTCCCACTCAAT  N/A  Click
4 complement(2739422..2739919)  PHAGE_Entero_phiV10: putative lysis accessory protein; APECO1_4062; phage(gi89152449)  1e-34  Click
5 complement(2739916..2740545)  PHAGE_Entero_phiV10: putative endolysin; APECO1_4061; phage(gi89152448)  8e-115  Click
6 complement(2740535..2740843)  PHAGE_Entero_phiV10: putative holin; APECO1_4060; phage(gi89152447)  2e-43  Click
7 complement(2740830..2741234)  PHAGE_Entero_phiV10: putative integral membrane protein; APECO1_4059; phage(gi89152446)  9e-64  Click
8 complement(2741541..2744660)  PHAGE_Escher_phAPEC8: tail fiber protein; APECO1_4058; phage(gi448260439)  0.0  Click
9 2744733..2745113  PHAGE_Entero_phiV10: hypothetical protein PhiV10p24; APECO1_4057; phage(gi89152444)  3e-44  Click
10 2745429..2746124  PHAGE_Entero_phiV10: putative anti-immunity protein; APECO1_4056; phage(gi89152443)  2e-98  Click
11 complement(2747195..2747611)  hypothetical protein; APECO1_4055  N/A  Click
12 complement(2747795..2750269)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p20; APECO1_4054; phage(gi89152441)  0.0  Click
13 complement(2750275..2752077)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p19; APECO1_4053; phage(gi89152440)  0.0  Click
14 complement(2752074..2754587)  PHAGE_Entero_phiV10: hypothetical structural protein; APECO1_4052; phage(gi89152439)  0.0  Click
15 complement(2754600..2755139)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p17; APECO1_4051; phage(gi89152438)  2e-56  Click
16 complement(2755139..2755603)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p16; APECO1_4050; phage(gi89152437)  7e-86  Click
17 complement(2755603..2758074)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p15; APECO1_4049; phage(gi89152436)  0.0  Click
18 complement(2758074..2758679)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p14; APECO1_4048; phage(gi89152435)  8e-114  Click
19 complement(2758679..2759008)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p13; APECO1_4047; phage(gi89152434)  2e-55  Click
20 complement(2759053..2759397)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p12; APECO1_4046; phage(gi89152433)  4e-59  Click
21 complement(2759399..2759836)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p11; APECO1_4045; phage(gi89152432)  1e-74  Click
22 complement(2759888..2760880)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p10; APECO1_4044; phage(gi89152431)  0.0  Click
23 complement(2760889..2761590)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p09; APECO1_4043; phage(gi89152430)  1e-128  Click
24 complement(2761587..2761883)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p08; APECO1_4042; phage(gi89152429)  3e-50  Click
25 complement(2761880..2763559)  PHAGE_Entero_phiV10: putative head-to-tail-joining protein; APECO1_4041; phage(gi89152428)  0.0  Click
26 2764208..2764281  tRNA  N/A  Click
27 2764483..2764863  PHAGE_Entero_phiV10: hypothetical protein PhiV10p03; APECO1_4039; phage(gi89152424)  4e-41  Click
28 complement(2764954..2766429)  PHAGE_Entero_phiV10: putative terminase large subunit; APECO1_4038; phage(gi89152423)  0.0  Click
29 complement(2766426..2767031)  PHAGE_Entero_phiV10: putative terminase small subunit; APECO1_4037; phage(gi155370097)  9e-110  Click
30 complement(2767327..2767674)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p55; APECO1_4036; phage(gi89152469)  3e-52  Click
31 complement(2767780..2768310)  PHAGE_Entero_ST104: ORF8; APECO1_4035; phage(gi46358656)  3e-48  Click
32 complement(2768307..2768720)  PHAGE_Escher_HK75: hypothetical protein; APECO1_4034; phage(gi356870705)  4e-28  Click
33 complement(2768886..2769203)  PHAGE_Salmon_E1: hypothetical protein VIP0051; APECO1_4033; phage(gi170676326)  1e-35  Click
34 complement(2769200..2769679)  PHAGE_Entero_phiV10: eae-like protein; APECO1_4032; phage(gi89152462)  3e-30  Click
35 complement(2769741..2770085)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p45; APECO1_4031; phage(gi89152461)  1e-62  Click
36 complement(2770203..2770979)  PHAGE_Entero_phiV10: putative replication protein p; APECO1_4030; phage(gi155370096)  1e-113  Click
37 complement(2770951..2771799)  PHAGE_Entero_phiV10: putative primosomal protein; APECO1_4029; phage(gi89152459)  5e-13  Click
38 2772508..2773092  PHAGE_Entero_phiV10: putative transcriptional repressor; APECO1_4028; phage(gi89152457)  7e-107  Click
39 2773386..2773700  PHAGE_Entero_phiV10: hypothetical protein PhiV10p38; APECO1_4027; phage(gi89152455)  2e-48  Click
40 2773697..2774596  PHAGE_Entero_epsilon15: hypothetical protein epsilon15p35; APECO1_4026; phage(gi30387414)  3e-158  Click
41 2774606..2775628  PHAGE_Entero_epsilon15: RecT; APECO1_4025; phage(gi30387413)  2e-178  Click
42 2775678..2775926  PHAGE_Entero_phiV10: putative transcriptional regulator; APECO1_4024; phage(gi89152453)  4e-44  Click
43 2776036..2776335  PHAGE_Entero_phiV10: putative transcriptional activator; APECO1_4023; phage(gi155370095)  5e-46  Click
44 2776328..2776978  PHAGE_Entero_phiV10: putative adenine methylase; APECO1_4022; phage(gi89152451)  7e-124  Click
45 2776855..2777634  PHAGE_Entero_HK225: NinI protein; APECO1_4021; phage(gi428782438)  1e-102  Click
46 complement(2777637..2778893)  PHAGE_Entero_phiV10: putative integrase; APECO1_4020; phage(gi89152450)  0.0  Click
47 2779084..2779100  attR    AATCATTCCCACTCAAT  N/A  Click
48 complement(2779086..2780663)  GMP synthase; APECO1_4019  N/A  Click
49 complement(2780732..2782267)  PHAGE_Staphy_42E: ORF012; APECO1_4018; phage(gi66395520)  4e-32  Click
Region 10, total : 36 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2739318..2739334  attL    AATCATTCCCACTCAAT  N/A  Click
2 complement(2747795..2750269)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p20; APECO1_4054; phage(gi89152441)  0.0  Click
3 complement(2750275..2752077)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p19; APECO1_4053; phage(gi89152440)  0.0  Click
4 complement(2752074..2754587)  PHAGE_Entero_phiV10: hypothetical structural protein; APECO1_4052; phage(gi89152439)  0.0  Click
5 complement(2754600..2755139)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p17; APECO1_4051; phage(gi89152438)  2e-56  Click
6 complement(2755139..2755603)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p16; APECO1_4050; phage(gi89152437)  7e-86  Click
7 complement(2755603..2758074)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p15; APECO1_4049; phage(gi89152436)  0.0  Click
8 complement(2758074..2758679)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p14; APECO1_4048; phage(gi89152435)  8e-114  Click
9 complement(2758679..2759008)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p13; APECO1_4047; phage(gi89152434)  2e-55  Click
10 complement(2759053..2759397)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p12; APECO1_4046; phage(gi89152433)  4e-59  Click
11 complement(2759399..2759836)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p11; APECO1_4045; phage(gi89152432)  1e-74  Click
12 complement(2759888..2760880)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p10; APECO1_4044; phage(gi89152431)  0.0  Click
13 complement(2760889..2761590)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p09; APECO1_4043; phage(gi89152430)  1e-128  Click
14 complement(2761587..2761883)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p08; APECO1_4042; phage(gi89152429)  3e-50  Click
15 complement(2761880..2763559)  PHAGE_Entero_phiV10: putative head-to-tail-joining protein; APECO1_4041; phage(gi89152428)  0.0  Click
16 2764208..2764281  tRNA  N/A  Click
17 2764483..2764863  PHAGE_Entero_phiV10: hypothetical protein PhiV10p03; APECO1_4039; phage(gi89152424)  4e-41  Click
18 complement(2764954..2766429)  PHAGE_Entero_phiV10: putative terminase large subunit; APECO1_4038; phage(gi89152423)  0.0  Click
19 complement(2766426..2767031)  PHAGE_Entero_phiV10: putative terminase small subunit; APECO1_4037; phage(gi155370097)  9e-110  Click
20 complement(2767327..2767674)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p55; APECO1_4036; phage(gi89152469)  3e-52  Click
21 complement(2767780..2768310)  PHAGE_Entero_ST104: ORF8; APECO1_4035; phage(gi46358656)  3e-48  Click
22 complement(2768307..2768720)  PHAGE_Escher_HK75: hypothetical protein; APECO1_4034; phage(gi356870705)  4e-28  Click
23 complement(2768886..2769203)  PHAGE_Salmon_E1: hypothetical protein VIP0051; APECO1_4033; phage(gi170676326)  1e-35  Click
24 complement(2769200..2769679)  PHAGE_Entero_phiV10: eae-like protein; APECO1_4032; phage(gi89152462)  3e-30  Click
25 complement(2769741..2770085)  PHAGE_Entero_phiV10: hypothetical protein PhiV10p45; APECO1_4031; phage(gi89152461)  1e-62  Click
26 complement(2770203..2770979)  PHAGE_Entero_phiV10: putative replication protein p; APECO1_4030; phage(gi155370096)  1e-113  Click
27 complement(2770951..2771799)  PHAGE_Entero_phiV10: putative primosomal protein; APECO1_4029; phage(gi89152459)  5e-13  Click
28 2772508..2773092  PHAGE_Entero_phiV10: putative transcriptional repressor; APECO1_4028; phage(gi89152457)  7e-107  Click
29 2773386..2773700  PHAGE_Entero_phiV10: hypothetical protein PhiV10p38; APECO1_4027; phage(gi89152455)  2e-48  Click
30 2773697..2774596  PHAGE_Entero_epsilon15: hypothetical protein epsilon15p35; APECO1_4026; phage(gi30387414)  3e-158  Click
31 2774606..2775628  PHAGE_Entero_epsilon15: RecT; APECO1_4025; phage(gi30387413)  2e-178  Click
32 2775678..2775926  PHAGE_Entero_phiV10: putative transcriptional regulator; APECO1_4024; phage(gi89152453)  4e-44  Click
33 2776036..2776335  PHAGE_Entero_phiV10: putative transcriptional activator; APECO1_4023; phage(gi155370095)  5e-46  Click
34 2776328..2776978  PHAGE_Entero_phiV10: putative adenine methylase; APECO1_4022; phage(gi89152451)  7e-124  Click
35 2776855..2777634  PHAGE_Entero_HK225: NinI protein; APECO1_4021; phage(gi428782438)  1e-102  Click
36 complement(2777637..2778893)  PHAGE_Entero_phiV10: putative integrase; APECO1_4020; phage(gi89152450)  0.0  Click
37 2779084..2779100  attR    AATCATTCCCACTCAAT  N/A  Click
38 complement(2779086..2780663)  GMP synthase; APECO1_4019  N/A  Click
39 complement(2780732..2782267)  PHAGE_Staphy_42E: ORF012; APECO1_4018; phage(gi66395520)  4e-32  Click
Region 11, total : 45 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2915067..2915093  attL    CCAATCATGATTGGACGGTGTAAGGAC  N/A  Click
2 2920995..2921489  PHAGE_Entero_HK106: side tail fiber protein; APECO1_3910; phage(gi428783303)  6e-46  Click
3 2921489..2922091  PHAGE_Entero_HK106: tail fiber assembly protein; APECO1_3909; phage(gi428783304)  3e-96  Click
4 complement(2922063..2922506)  PHAGE_Entero_mEp213: tail fiber assembly protein; APECO1_3908; phage(gi428782612)  2e-24  Click
5 complement(2923256..2923840)  PHAGE_Entero_SfV: tail protein; APECO1_3907; phage(gi19548988)  8e-113  Click
6 complement(2923831..2924889)  PHAGE_Entero_SfV: tail protein; APECO1_3906; phage(gi19549009)  0.0  Click
7 complement(2924876..2925304)  PHAGE_Entero_SfV: tail protein; APECO1_3905; phage(gi19549008)  1e-80  Click
8 complement(2925301..2925849)  PHAGE_Entero_SfV: tail protein; APECO1_3904; phage(gi19549007)  2e-98  Click
9 complement(2925849..2926928)  PHAGE_Entero_SfV: tail protein; APECO1_3903; phage(gi19549006)  0.0  Click
10 complement(2926925..2928295)  PHAGE_Entero_SfV: tail/DNA circulation protein; APECO1_3902; phage(gi19549005)  0.0  Click
11 complement(2928314..2930149)  PHAGE_Entero_SfV: tail protein; APECO1_3901; phage(gi19549004)  0.0  Click
12 2930148..2930441  hypothetical protein; APECO1_3900  N/A  Click
13 complement(2930560..2930916)  PHAGE_Entero_SfV: hypothetical protein SfVp12; APECO1_3899; phage(gi19549002)  3e-65  Click
14 complement(2930916..2932412)  PHAGE_Entero_SfV: tail sheath protein; APECO1_3898; phage(gi19549001)  0.0  Click
15 complement(2932575..2933135)  PHAGE_Entero_SfV: hypothetical protein SfVp09; APECO1_3897; phage(gi19548999)  5e-104  Click
16 complement(2933132..2933638)  PHAGE_Entero_SfV: hypothetical protein SfVp08; APECO1_3896; phage(gi19548998)  2e-94  Click
17 complement(2933613..2934023)  PHAGE_Entero_SfV: hypothetical protein SfVp07; APECO1_3895; phage(gi19548997)  5e-52  Click
18 complement(2934020..2934343)  PHAGE_Entero_SfV: hypothetical protein SfVp06; APECO1_3894; phage(gi19548996)  3e-34  Click
19 complement(2934596..2935801)  PHAGE_Salmon_ST64B: Major capsid protein precursor; APECO1_3893; phage(gi23505451)  0.0  Click
20 complement(2935816..2936502)  PHAGE_Salmon_ST64B: Pro-head protease; APECO1_3892; phage(gi23505450)  9e-126  Click
21 complement(2936444..2937559)  PHAGE_Salmon_ST64B: Portal Protein; APECO1_3891; phage(gi23505449)  0.0  Click
22 complement(2937879..2939612)  PHAGE_Entero_SfV: large terminase subunit; APECO1_3890; phage(gi19548992)  0.0  Click
23 complement(2939609..2940103)  PHAGE_Entero_SfV: small terminase subunit; APECO1_3889; phage(gi19548991)  4e-90  Click
24 complement(2940229..2940579)  PHAGE_Entero_SfV: hypothetical protein SfVp53; APECO1_3888; phage(gi19549040)  1e-64  Click
25 complement(2941550..2941987)  PHAGE_Escher_HK75: Rz; APECO1_3887; phage(gi356870731)  1e-69  Click
26 complement(2941984..2942460)  PHAGE_Escher_HK75: lysozyme; APECO1_3886; phage(gi356870730)  9e-84  Click
27 complement(2942447..2942851)  PHAGE_Salmon_ST160: Gp13; APECO1_3885; phage(gi318065943)  2e-39  Click
28 complement(2942904..2943239)  hypothetical protein; APECO1_3884  N/A  Click
29 complement(2943425..2944177)  PHAGE_Entero_SfV: antitermination protein Q; antitermination; phage protein Q; APECO1_3883(gi19549033)  3e-143  Click
30 complement(2944191..2945144)  PHAGE_Entero_SfV: hypothetical protein SfVp45; APECO1_3882; phage(gi19549032)  1e-178  Click
31 complement(2945188..2945985)  PHAGE_Entero_SfV: hypothetical protein SfVp44; APECO1_3881; phage(gi19549031)  4e-133  Click
32 complement(2946005..2946394)  PHAGE_Entero_SfV: crossover junction endodeoxyribonuclease; APECO1_3880; phage(gi19549030)  1e-70  Click
33 complement(2946391..2946717)  PHAGE_Entero_SfV: hypothetical protein SfVp42; APECO1_3879; phage(gi19549029)  1e-54  Click
34 complement(2946714..2947367)  PHAGE_Entero_SfV: DNA adenine methylase; APECO1_3878; phage(gi19549028)  5e-126  Click
35 complement(2947367..2947855)  PHAGE_Entero_SfV: hypothetical protein SfVp40; APECO1_3877; phage(gi19549027)  2e-88  Click
36 complement(2947858..2948799)  PHAGE_Entero_phiP27: hypothetical protein P27p17; APECO1_3876; phage(gi18249881)  2e-41  Click
37 complement(2948809..2949147)  hypothetical protein; APECO1_3875  N/A  Click
38 complement(2949144..2949707)  PHAGE_Entero_SfV: hypothetical protein SfVp36; DNA-binding; phage transcriptional regulator; APECO1_3874(gi19549023)  2e-93  Click
39 complement(2949739..2950044)  PHAGE_Entero_SfV: repressor; APECO1_3873; phage(gi19549022)  4e-33  Click
40 2950030..2950704  PHAGE_Entero_SfV: repressor; APECO1_3872; phage(gi19549021)  5e-132  Click
41 complement(2950907..2951419)  hypothetical protein; APECO1_3871  N/A  Click
42 2951570..2952250  PHAGE_Entero_SfV: hypothetical protein SfVp32; APECO1_3870; phage(gi19549019)  1e-61  Click
43 2952316..2953140  PHAGE_Entero_SfV: hypothetical protein SfVp31; APECO1_3869; phage(gi19549018)  9e-152  Click
44 2953268..2953792  PHAGE_Entero_SfV: hypothetical protein SfVp30; APECO1_3868; phage(gi19549017)  2e-94  Click
45 2953901..2954767  hypothetical protein; APECO1_3867  N/A  Click
46 2954976..2956148  PHAGE_Cronob_phiES15: putative integrase; APECO1_3866; phage(gi401817566)  6e-148  Click
47 2958186..2958212  attR    CCAATCATGATTGGACGGTGTAAGGAC  N/A  Click
Region 12, total : 44 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 5000558..5000570  attL    TACGCCGCATCCG  N/A  Click
2 5003436..5003449  attL    CTTTCACTCTTTCA  N/A  Click
3 5003641..5004855  PHAGE_Entero_cdtI: Phage integrase; APECO1_2052; phage(gi148609414)  0.0  Click
4 complement(5005231..5006226)  hypothetical protein; APECO1_2051  N/A  Click
5 complement(5006794..5007414)  PHAGE_Entero_cdtI: Valyl-tRNA synthetase; APECO1_2050; phage(gi148609417)  4e-120  Click
6 complement(5007414..5007776)  PHAGE_Entero_mEp460: hypothetical protein; APECO1_2049; phage(gi428782348)  2e-66  Click
7 complement(5007767..5008333)  PHAGE_Entero_mEp460: hypothetical protein; APECO1_2048; phage(gi428782349)  3e-100  Click
8 complement(5008431..5009255)  PHAGE_Entero_mEp460: hypothetical protein; APECO1_2047; phage(gi428782350)  2e-151  Click
9 complement(5009321..5009701)  PHAGE_Entero_mEp460: hypothetical protein; APECO1_2046; phage(gi428782351)  2e-62  Click
10 complement(5010406..5011098)  PHAGE_Entero_mEp460: prophage repressor; APECO1_2045; phage(gi428782354)  3e-118  Click
11 5011196..5011456  PHAGE_Entero_mEp460: putative antirepressor Cro; APECO1_2044; phage(gi428782355)  2e-43  Click
12 5011449..5012000  PHAGE_Entero_mEp460: hypothetical protein; APECO1_2043; phage(gi428782356)  8e-102  Click
13 5011997..5013148  PHAGE_Entero_mEp460: regulatory protein Rha; APECO1_2042; phage(gi428782357)  0.0  Click
14 5013366..5014184  PHAGE_Entero_mEp460: replication protein; APECO1_2041; phage(gi428782359)  2e-155  Click
15 5014187..5014675  PHAGE_Entero_mEp460: hypothetical protein; APECO1_2040; phage(gi428782360)  7e-88  Click
16 5014642..5015001  PHAGE_Entero_mEp460: LexA DNA binding domain protein; APECO1_2039; phage(gi428782362)  2e-53  Click
17 5014998..5015387  PHAGE_Entero_mEp460: holliday junction resolvase; APECO1_2038; phage(gi428782363)  5e-70  Click
18 5015407..5015895  PHAGE_Entero_mEp460: KilA-N domain protein; APECO1_2037; phage(gi428782364)  9e-66  Click
19 5016207..5017202  PHAGE_Entero_mEp460: hypothetical protein; APECO1_2036; phage(gi428782365)  0.0  Click
20 5017174..5017968  PHAGE_Entero_mEp460: late gene regulator; APECO1_2035; phage(gi428782366)  5e-140  Click
21 5020085..5020636  PHAGE_Entero_mEp460: hypothetical protein; APECO1_2034; phage(gi428782371)  4e-35  Click
22 5020958..5021491  PHAGE_Entero_mEp460: endolysin; lysozyme;; phage APECO1_2033(gi428782372)  1e-97  Click
23 5021488..5021985  PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; APECO1_2032; phage(gi16765210)  2e-53  Click
24 5022794..5023063  hypothetical protein; APECO1_2031  N/A  Click
25 5023628..5023641  attR    CTTTCACTCTTTCA  N/A  Click
26 5024196..5024474  hypothetical protein; APECO1_2030  N/A  Click
27 5024464..5024955  PHAGE_Entero_mEp460: terminase small subunit; APECO1_2029; phage(gi428782317)  5e-74  Click
28 5024955..5027057  PHAGE_Entero_mEp460: terminase large subunit; APECO1_2028; phage(gi428782318)  0.0  Click
29 5027194..5028774  PHAGE_Entero_mEp460: portal protein; APECO1_2027; phage(gi428782320)  0.0  Click
30 5028569..5030746  PHAGE_Entero_mEp460: putative protease/scaffold protein; APECO1_2026; phage(gi428782321)  0.0  Click
31 5030833..5031156  PHAGE_Entero_mEp460: hypothetical protein; APECO1_2025; phage(gi428782322)  4e-54  Click
32 5031149..5031424  PHAGE_Entero_mEp460: hypothetical protein; APECO1_2024; phage(gi428782323)  4e-47  Click
33 5031436..5032014  PHAGE_Entero_mEp460: minor tail protein; APECO1_2023; phage(gi428782324)  9e-104  Click
34 5032348..5033166  PHAGE_Entero_mEp460: major tail protein; APECO1_2022; phage(gi428782326)  2e-134  Click
35 5033215..5033613  PHAGE_Entero_mEp460: minor tail protein; APECO1_2021; phage(gi428782327)  7e-67  Click
36 5033622..5033951  PHAGE_Entero_mEp460: tail assembly protein; APECO1_2020; phage(gi428782328)  5e-59  Click
37 5033914..5036988  PHAGE_Entero_mEp460: tail length tape measure protein; APECO1_2019; phage(gi428782329)  0.0  Click
38 5036988..5037317  PHAGE_Entero_mEp460: minor tail protein; APECO1_2018; phage(gi428782330)  4e-61  Click
39 5037327..5038025  PHAGE_Entero_mEp460: minor tail protein; APECO1_2017; phage(gi428782331)  1e-134  Click
40 5038030..5038773  PHAGE_Entero_mEp460: tail fiber component; APECO1_2016; phage(gi428782332)  1e-145  Click
41 5038671..5039318  PHAGE_Entero_mEp460: tail assembly protein; APECO1_2015; phage(gi428782333)  2e-95  Click
42 5039379..5042774  PHAGE_Entero_mEp460: host specificity protein; APECO1_2014; phage(gi428782334)  0.0  Click
43 5042842..5043441  PHAGE_Entero_mEp460: Lom protein; APECO1_2013; phage(gi428782335)  8e-111  Click
44 5043500..5045884  PHAGE_Entero_mEp460: side tail fiber protein; APECO1_2012; phage(gi428782336)  4e-105  Click
45 5045884..5046165  hypothetical protein; APECO1_2011  N/A  Click
46 5046175..5046879  PHAGE_Marseillevirus: hypothetical protein MAR_ORF045; APECO1_2010; phage(gi284504080)  7e-06  Click
47 complement(5046970..5047323)  hypothetical protein; APECO1_2009  N/A  Click
48 complement(5047411..5048001)  PHAGE_Escher_D108: G region invertase; site-specific; phage recombinase; APECO1_2008(gi281199698)  8e-26  Click
49 5054487..5054499  attR    TACGCCGCATCCG  N/A  Click