Definition Listeria welshimeri serovar 6b str. SLCC5334, complete genome.
Accession NC_008555
Length 2,814,130
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 57 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1194208..1194219  attL    CTTTTTCATTTT  N/A  Click
2 1206241..1206852  PHAGE_Uganda_virus: polyprotein; lwe1194; phage(gi314998982)  1e-12  Click
3 1206891..1207415  phosphoesterase family protein; lwe1195  N/A  Click
4 1207526..1207599  tRNA  N/A  Click
5 complement(1207736..1208869)  PHAGE_Lister_2389: integrase; lwe1196; phage(gi17488529)  2e-98  Click
6 1209690..1209703  attL    ATAAATTACATTTT  N/A  Click
7 complement(1209702..1210175)  PHAGE_Lister_2389: Rep protein; lwe1197; phage(gi17488532)  7e-25  Click
8 1210417..1210428  attL    TAATATTATAGA  N/A  Click
9 1210442..1210633  PHAGE_Lister_B025: gp38; lwe1198; phage(gi157325255)  1e-24  Click
10 1210669..1210911  PHAGE_Lister_B025: gp39; lwe1199; phage(gi157325257)  1e-26  Click
11 1211344..1211496  PHAGE_Lister_B025: gp41; lwe1200; phage(gi157325258)  8e-22  Click
12 1211804..1212079  PHAGE_Lister_A500: gp36; lwe1201; phage(gi157324995)  2e-15  Click
13 1212076..1212813  PHAGE_Lister_B025: gp42; lwe1202; phage(gi157325259)  1e-130  Click
14 1212824..1213768  PHAGE_Bacill_BCJA1c: integrase; lwe1203; phage(gi56694872)  8e-52  Click
15 1213781..1214467  PHAGE_Lister_B025: gp44; lwe1204; phage(gi157325261)  1e-119  Click
16 1214457..1215023  PHAGE_Lister_2389: Gp35 protein; lwe1205; phage(gi17488540)  2e-35  Click
17 1215020..1215463  PHAGE_Lister_A500: gp52; lwe1206; phage(gi157325010)  3e-46  Click
18 1215460..1215981  PHAGE_Lister_A500: gp53; lwe1207; phage(gi157325012)  3e-91  Click
19 1216342..1216539  PHAGE_Lister_A500: gp55; lwe1208; phage(gi157325014)  3e-20  Click
20 1216989..1217213  PHAGE_Brocho_A9: gp45; lwe1209; phage(gi327197688)  3e-10  Click
21 1217210..1217383  PHAGE_Lister_2389: Gp44; lwe1210; phage(gi17488549)  1e-25  Click
22 1217380..1217763  PHAGE_Lister_B025: gp55; lwe1211; phage(gi157325272)  6e-55  Click
23 1217765..1218244  PHAGE_Lister_2389: Gp46 protein; lwe1212; phage(gi17488551)  2e-83  Click
24 1218254..1218946  PHAGE_Lister_2389: Gp47 protein; lwe1213; phage(gi17488552)  2e-132  Click
25 1219010..1220266  PHAGE_Lister_2389: helicase; lwe1214; phage(gi17488553)  0.0  Click
26 1220291..1220776  PHAGE_Lister_2389: Gp49 protein; lwe1215; phage(gi17488554)  2e-90  Click
27 1220799..1223141  PHAGE_Lister_2389: primase; lwe1216; phage(gi17488555)  2e-150  Click
28 1223436..1223762  PHAGE_Lister_2389: Gp51 protein; lwe1217; phage(gi17488556)  2e-54  Click
29 1223784..1224164  PHAGE_Lister_2389: Gp52 protein; lwe1218; phage(gi17488557)  1e-29  Click
30 1224165..1224590  PHAGE_Lister_2389: Gp53 protein; lwe1219; phage(gi17488558)  8e-77  Click
31 1224635..1224646  attR    TAATATTATAGA  N/A  Click
32 1225240..1225614  PHAGE_Strept_PH10: hypothetical protein PH10_gp30; lwe1220; phage(gi238821347)  1e-27  Click
33 1225595..1226029  PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp16; lwe1221; phage(gi115334626)  4e-21  Click
34 1226026..1227777  PHAGE_Bacill_1: Phage terminase; lwe1222; phage(gi155042934)  0.0  Click
35 1227791..1228972  PHAGE_Geobac_GBSV1: phage portal protein; lwe1223; phage(gi115334628)  6e-132  Click
36 1228969..1229553  PHAGE_Geobac_GBSV1: phage prohead; lwe1224; phage(gi115334629)  2e-65  Click
37 1229544..1230728  PHAGE_Staphy_StB20: major head protein; lwe1225; phage(gi431809769)  8e-95  Click
38 1230733..1230912  PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp21; lwe1226; phage(gi115334631)  9e-13  Click
39 1230912..1231199  PHAGE_Bacill_1: hypothetical protein BV1_gp23; lwe1227; phage(gi155042938)  2e-25  Click
40 1231186..1231491  PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp23; lwe1228; phage(gi115334633)  8e-25  Click
41 1231498..1231851  PHAGE_Lactoc_bIL285: Orf48; lwe1229; phage(gi13095728)  6e-20  Click
42 1231848..1232171  PHAGE_Geobac_GBSV1: aminopeptidase; lwe1230; phage(gi115334635)  5e-13  Click
43 1232172..1232753  PHAGE_Geobac_GBSV1: major tail protein; lwe1231; phage(gi115334636)  2e-46  Click
44 1232798..1233154  PHAGE_Bacill_1: hypothetical protein BV1_gp29; lwe1232; phage(gi155042944)  1e-30  Click
45 1233187..1233363  PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp28; lwe1233; phage(gi115334638)  2e-09  Click
46 1233378..1236650  PHAGE_Lister_2389: tail tape measure protein; lwe1234; phage(gi17488515)  2e-64  Click
47 1236647..1237387  PHAGE_Clostr_phiCD38_2: tail component protein; lwe1235; phage(gi333798124)  3e-12  Click
48 1237369..1239510  PHAGE_Clostr_phiCD38_2: tail protein/endopeptidase; lwe1236; phage(gi333798125)  9e-24  Click
49 1239507..1240610  PHAGE_Lister_2389: Gp15 protein; lwe1237; phage(gi17488518)  2e-124  Click
50 1240662..1240964  hypothetical protein; lwe1238  N/A  Click
51 1240978..1241232  PHAGE_Lister_2389: holin; lwe1239; phage(gi17488523)  8e-38  Click
52 1241232..1242194  PHAGE_Lister_2389: Ply protein; lwe1240; phage(gi17488524)  1e-85  Click
53 1242218..1242634  PHAGE_Lister_B025: gp26; lwe1241; phage(gi157325243)  3e-27  Click
54 complement(1242729..1243985)  hypothetical protein; lwe1242  N/A  Click
55 1244066..1244269  hypothetical protein; lwe1243  N/A  Click
56 1244800..1245336  putative secreted protein; lwe1244  N/A  Click
57 1245352..1245993  phage-related protein, putative; lwe1245  N/A  Click
58 1246143..1246376  PHAGE_Lister_A006: gp26; lwe1246; phage(gi157325441)  3e-36  Click
59 complement(1246704..1246820)  PHAGE_Lister_A006: gp28; lwe1247; phage(gi157325443)  8e-15  Click
60 complement(1246994..1247419)  PHAGE_Strept_YMC_2011: integrase; lwe1248; phage(gi399498686)  2e-20  Click
61 complement(1247483..1248163)  PHAGE_Lister_A500: gp32; lwe1249; phage(gi157324991)  3e-05  Click
62 complement(1248184..1248876)  PHAGE_Lister_A118: gp33; lwe1250; phage(gi16798816)  1e-84  Click
63 1249149..1249162  attR    ATAAATTACATTTT  N/A  Click
64 1253590..1253601  attR    CTTTTTCATTTT  N/A  Click