Definition Lactobacillus gasseri ATCC 33323, complete genome.
Accession NC_008530
Length 1,894,360
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 129 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 588537..588548  attL    AAAGCTTATTTT  N/A  Click
2 597924..599231  PHAGE_Cafete_BV_PW1: putative superfamily II helicase/eIF-4AIII; LGAS_0569; phage(gi310831360)  2e-31  Click
3 599231..600562  cellobiose-specific PTS system IIC component; LGAS_0570  N/A  Click
4 600613..600685  tRNA  N/A  Click
5 complement(600763..601881)  PHAGE_Lactob_KC5a: integrase; LGAS_0572; phage(gi90592576)  6e-171  Click
6 complement(602095..602718)  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0573; phage(gi90592577)  2e-108  Click
7 complement(602783..603265)  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0574; phage(gi90592578)  3e-53  Click
8 complement(603240..603587)  PHAGE_Lactob_KC5a: putative transcriptional regulator; LGAS_0575; phage(gi90592579)  4e-37  Click
9 603732..603956  PHAGE_Lactob_KC5a: putative CI-like repressor; LGAS_0576; phage(gi90592580)  3e-34  Click
10 603989..604324  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0577; phage(gi90592581)  2e-62  Click
11 604293..604607  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0578; phage(gi90592582)  1e-51  Click
12 604725..604871  PHAGE_Lactob_KC5a: putative recombination protein; LGAS_0579; phage(gi90592583)  1e-16  Click
13 604923..605255  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0580; phage(gi90592584)  3e-40  Click
14 605255..606115  PHAGE_Lactob_Lj771: hypothetical protein LJ771_008; LGAS_0581; phage(gi163932160)  2e-149  Click
15 606121..606933  PHAGE_Lactob_Lj771: putative recombination protein; LGAS_0582; phage(gi163932161)  9e-150  Click
16 606943..607866  PHAGE_Lactob_KC5a: putative phage replication protein; LGAS_0583; phage(gi90592587)  3e-82  Click
17 607872..608177  PHAGE_Lactob_KC5a: putative transcriptional regulator; LGAS_0584; phage(gi90592588)  1e-18  Click
18 608155..608955  PHAGE_Lactob_KC5a: putative anti-repressor; LGAS_0585; phage(gi90592591)  2e-125  Click
19 608970..609155  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0586; phage(gi90592592)  7e-27  Click
20 609165..609377  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0587; phage(gi90592593)  2e-28  Click
21 609570..609833  PHAGE_Lactob_Lj771: hypothetical protein LJ771_017; LGAS_0588; phage(gi163932169)  3e-08  Click
22 610012..610383  PHAGE_Lactob_Lj771: hypothetical protein LJ771_019; LGAS_0589; phage(gi163932171)  3e-63  Click
23 610384..610707  hypothetical protein; LGAS_0590  N/A  Click
24 610720..611181  PHAGE_Lactob_KC5a: putative holiday junction resolvase; LGAS_0591; phage(gi90592597)  7e-84  Click
25 611182..611403  PHAGE_Lactob_Lj771: hypothetical protein LJ771_022; LGAS_0592; phage(gi163932174)  2e-16  Click
26 611437..611604  hypothetical protein; LGAS_0593  N/A  Click
27 611594..611884  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0594; phage(gi90592599)  5e-52  Click
28 611887..612105  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0595; phage(gi90592600)  4e-36  Click
29 612089..612259  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0596; phage(gi90592601)  2e-27  Click
30 612289..612819  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0597; phage(gi90592602)  5e-98  Click
31 613549..613621  tRNA  N/A  Click
32 613677..613961  PHAGE_Lactob_KC5a: putative transcriptional regulator; LGAS_0599; phage(gi90592604)  3e-51  Click
33 614213..614294  tRNA  N/A  Click
34 614402..615019  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0601; phage(gi90592606)  1e-121  Click
35 615202..615858  PHAGE_Lactob_KC5a: putative phage terminase large subunit A; LGAS_0602; phage(gi90592608)  1e-122  Click
36 615919..616440  PHAGE_Lactob_KC5a: putative phage terminase small subunit; LGAS_0603; phage(gi90592609)  2e-77  Click
37 616529..617260  PHAGE_Lactob_AQ113: HNH endonuclease; LGAS_0604; phage(gi446730230)  6e-37  Click
38 617242..618486  PHAGE_Lactob_KC5a: putative phage terminase large subunit B; LGAS_0605; phage(gi90592610)  4e-134  Click
39 618477..619889  PHAGE_Lactob_KC5a: putative phage portal protein; LGAS_0606; phage(gi90592611)  0.0  Click
40 619879..621411  PHAGE_Lactob_KC5a: putative phage head protein; LGAS_0607; phage(gi90592612)  0.0  Click
41 621380..621592  hypothetical protein; LGAS_0608  N/A  Click
42 621710..622270  PHAGE_Lactob_KC5a: putative phage minor capsid protein; LGAS_0609; phage(gi90592613)  2e-89  Click
43 622270..623352  PHAGE_Lactob_KC5a: putative phage major capsid protein; LGAS_0610; phage(gi90592614)  8e-123  Click
44 623361..623750  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0611; phage(gi90592615)  5e-32  Click
45 623747..624109  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0612; phage(gi90592616)  6e-63  Click
46 624106..624540  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0613; phage(gi90592617)  2e-80  Click
47 624537..624944  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0614; phage(gi90592618)  3e-72  Click
48 624919..625146  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0615; phage(gi90592619)  4e-34  Click
49 625146..626501  PHAGE_Lactob_KC5a: putative phage sheath tail protein; LGAS_0616; phage(gi90592620)  0.0  Click
50 626513..626983  PHAGE_Lactob_KC5a: putative phage core tail protein; LGAS_0617; phage(gi90592621)  3e-84  Click
51 626995..627414  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0618; phage(gi90592622)  1e-70  Click
52 627651..631061  PHAGE_Lactob_KC5a: putative minor tail protein; LGAS_0619; phage(gi90592623)  0.0  Click
53 631054..631743  PHAGE_Lactob_KC5a: putative LysM-like protein; LGAS_0620; phage(gi90592624)  3e-130  Click
54 631740..632786  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0621; phage(gi90592625)  0.0  Click
55 632765..633127  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0622; phage(gi90592626)  5e-62  Click
56 633108..633500  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0623; phage(gi90592627)  2e-68  Click
57 633497..634648  PHAGE_Lactob_KC5a: putative tail protein; LGAS_0624; phage(gi90592628)  0.0  Click
58 634638..635198  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0625; phage(gi90592629)  2e-95  Click
59 635211..637379  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0626; phage(gi90592630)  0.0  Click
60 637419..637928  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0627; phage(gi90592631)  2e-72  Click
61 637928..638122  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0628; phage(gi90592632)  9e-29  Click
62 638139..638498  PHAGE_Lactob_KC5a: unknown; LGAS_0629; phage(gi90592636)  2e-54  Click
63 638509..638787  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0630; phage(gi90592633)  5e-45  Click
64 638784..639215  PHAGE_Lactob_KC5a: holin; LGAS_0631; phage(gi90592634)  3e-41  Click
65 639225..640157  PHAGE_Lactob_phiadh: lysin; LGAS_0632; phage(gi9633062)  7e-128  Click
66 640240..640371  hypothetical protein; LGAS_0633  N/A  Click
67 640741..640773  attL    GTAGAGGTGAGTTCGAATCTCACCGGGGTCATA  N/A  Click
68 complement(640849..641967)  PHAGE_Lactob_KC5a: integrase; LGAS_0634; phage(gi90592576)  6e-171  Click
69 complement(642181..642804)  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0635; phage(gi90592577)  2e-108  Click
70 complement(642869..643351)  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0636; phage(gi90592578)  3e-53  Click
71 complement(643326..643673)  PHAGE_Lactob_KC5a: putative transcriptional regulator; LGAS_0637; phage(gi90592579)  4e-37  Click
72 643818..644042  PHAGE_Lactob_KC5a: putative CI-like repressor; LGAS_0638; phage(gi90592580)  3e-34  Click
73 644075..644410  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0639; phage(gi90592581)  2e-62  Click
74 644379..644693  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0640; phage(gi90592582)  1e-51  Click
75 644811..644957  PHAGE_Lactob_KC5a: putative recombination protein; LGAS_0641; phage(gi90592583)  1e-16  Click
76 645009..645341  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0642; phage(gi90592584)  3e-40  Click
77 645341..646201  PHAGE_Lactob_Lj771: hypothetical protein LJ771_008; LGAS_0643; phage(gi163932160)  2e-149  Click
78 646207..647019  PHAGE_Lactob_Lj771: putative recombination protein; LGAS_0644; phage(gi163932161)  9e-150  Click
79 647029..647952  PHAGE_Lactob_KC5a: putative phage replication protein; LGAS_0645; phage(gi90592587)  3e-82  Click
80 647958..648263  PHAGE_Lactob_KC5a: putative transcriptional regulator; LGAS_0646; phage(gi90592588)  1e-18  Click
81 648241..649041  PHAGE_Lactob_KC5a: putative anti-repressor; LGAS_0647; phage(gi90592591)  2e-125  Click
82 649056..649241  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0648; phage(gi90592592)  7e-27  Click
83 649251..649463  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0649; phage(gi90592593)  2e-28  Click
84 649656..649919  PHAGE_Lactob_Lj771: hypothetical protein LJ771_017; LGAS_0650; phage(gi163932169)  3e-08  Click
85 650098..650469  PHAGE_Lactob_Lj771: hypothetical protein LJ771_019; LGAS_0651; phage(gi163932171)  3e-63  Click
86 650470..650793  hypothetical protein; LGAS_0652  N/A  Click
87 650806..651267  PHAGE_Lactob_KC5a: putative holiday junction resolvase; LGAS_0653; phage(gi90592597)  7e-84  Click
88 651268..651489  PHAGE_Lactob_Lj771: hypothetical protein LJ771_022; LGAS_0654; phage(gi163932174)  2e-16  Click
89 651523..651690  hypothetical protein; LGAS_0655  N/A  Click
90 651680..651970  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0656; phage(gi90592599)  5e-52  Click
91 651973..652191  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0657; phage(gi90592600)  4e-36  Click
92 652175..652345  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0658; phage(gi90592601)  2e-27  Click
93 652375..652905  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0659; phage(gi90592602)  5e-98  Click
94 653635..653707  tRNA  N/A  Click
95 653763..654047  PHAGE_Lactob_KC5a: putative transcriptional regulator; LGAS_0661; phage(gi90592604)  3e-51  Click
96 654299..654380  tRNA  N/A  Click
97 654488..655105  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0663; phage(gi90592606)  1e-121  Click
98 655288..655944  PHAGE_Lactob_KC5a: putative phage terminase large subunit A; LGAS_0664; phage(gi90592608)  1e-122  Click
99 656005..656526  PHAGE_Lactob_KC5a: putative phage terminase small subunit; LGAS_0665; phage(gi90592609)  2e-77  Click
100 656615..657346  PHAGE_Lactob_AQ113: HNH endonuclease; LGAS_0666; phage(gi446730230)  6e-37  Click
101 657328..658572  PHAGE_Lactob_KC5a: putative phage terminase large subunit B; LGAS_0667; phage(gi90592610)  4e-134  Click
102 658563..659975  PHAGE_Lactob_KC5a: putative phage portal protein; LGAS_0668; phage(gi90592611)  0.0  Click
103 659965..661497  PHAGE_Lactob_KC5a: putative phage head protein; LGAS_0669; phage(gi90592612)  0.0  Click
104 661466..661678  hypothetical protein; LGAS_0670  N/A  Click
105 661796..662356  PHAGE_Lactob_KC5a: putative phage minor capsid protein; LGAS_0671; phage(gi90592613)  2e-89  Click
106 662356..663438  PHAGE_Lactob_KC5a: putative phage major capsid protein; LGAS_0672; phage(gi90592614)  8e-123  Click
107 663447..663836  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0673; phage(gi90592615)  5e-32  Click
108 663833..664195  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0674; phage(gi90592616)  6e-63  Click
109 664192..664626  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0675; phage(gi90592617)  2e-80  Click
110 664623..665030  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0676; phage(gi90592618)  3e-72  Click
111 665005..665232  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0677; phage(gi90592619)  4e-34  Click
112 665232..666587  PHAGE_Lactob_KC5a: putative phage sheath tail protein; LGAS_0678; phage(gi90592620)  0.0  Click
113 666599..667069  PHAGE_Lactob_KC5a: putative phage core tail protein; LGAS_0679; phage(gi90592621)  3e-84  Click
114 667081..667500  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0680; phage(gi90592622)  1e-70  Click
115 667581..667691  hypothetical protein; LGAS_0681  N/A  Click
116 667737..671147  PHAGE_Lactob_KC5a: putative minor tail protein; LGAS_0682; phage(gi90592623)  0.0  Click
117 671140..671829  PHAGE_Lactob_KC5a: putative LysM-like protein; LGAS_0683; phage(gi90592624)  3e-130  Click
118 671826..672872  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0684; phage(gi90592625)  0.0  Click
119 672851..673213  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0685; phage(gi90592626)  5e-62  Click
120 673194..673586  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0686; phage(gi90592627)  2e-68  Click
121 673583..674734  PHAGE_Lactob_KC5a: putative tail protein; LGAS_0687; phage(gi90592628)  0.0  Click
122 674724..675284  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0688; phage(gi90592629)  2e-95  Click
123 675297..677465  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0689; phage(gi90592630)  0.0  Click
124 677505..678014  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0690; phage(gi90592631)  2e-72  Click
125 678014..678208  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0691; phage(gi90592632)  9e-29  Click
126 678225..678584  PHAGE_Lactob_KC5a: unknown; LGAS_0692; phage(gi90592636)  2e-54  Click
127 678595..678873  PHAGE_Lactob_KC5a: hypothetical protein; LGAS_0693; phage(gi90592633)  5e-45  Click
128 678870..679301  PHAGE_Lactob_KC5a: holin; LGAS_0694; phage(gi90592634)  3e-41  Click
129 679311..680243  PHAGE_Lactob_phiadh: lysin; LGAS_0695; phage(gi9633062)  7e-128  Click
130 680326..680457  hypothetical protein; LGAS_0696  N/A  Click
131 680827..680859  attR    GTAGAGGTGAGTTCGAATCTCACCGGGGTCATA  N/A  Click
132 681055..682353  PHAGE_Megavi_chiliensis: UDP-N-acetylglucosamine 2-epimerase; LGAS_0697; phage(gi363540634)  4e-37  Click
133 complement(682387..682911)  GtcA family membrane protein; LGAS_0698  N/A  Click
134 complement(682892..683338)  flavodoxin; LGAS_0699  N/A  Click
135 683523..684347  methionine aminopeptidase; LGAS_0700  N/A  Click
136 684363..685286  ribonuclease BN-like family protein; LGAS_0701  N/A  Click
137 685318..685329  attR    AAAGCTTATTTT  N/A  Click
138 685345..686253  PHAGE_Escher_phAPEC8: putative glucose-1-phosphate thymidylyltransferase; LGAS_0702; phage(gi448260372)  2e-15  Click
Region 2, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 906140..906154  attL    GATCATGTTCTAAAT  N/A  Click
2 909678..911126  PHAGE_Vibrio_ICP1: putative Gp5 baseplate hub subunit and tail lysozyme; LGAS_0912; phage(gi325171175)  4e-08  Click
3 911129..911968  GTPase; LGAS_0913  N/A  Click
4 911965..912717  PHAGE_Cafete_BV_PW1: putative ribonuclease HII; LGAS_0914; phage(gi310831397)  1e-27  Click
5 912769..913614  Rossmann fold nucleotide-binding protein for DNA uptake; LGAS_0915  N/A  Click
6 913680..915761  PHAGE_Acanth_mimivirus: DNA topoisomerase 1; LGAS_0916; phage(gi311977597)  6e-104  Click
7 915859..917175  tRNA (uracil-5-)-methyltransferase Gid; LGAS_0917  N/A  Click
8 917178..918101  PHAGE_Staphy_PT1028: ORF002; LGAS_0918; phage(gi66395166)  2e-12  Click
9 918106..918630  PROPHAGE_Escher_Sakai: ATP-dependent protease peptidase subunit; LGAS_0919; phage(gi15834113)  1e-40  Click
10 918641..920035  PROPHAGE_Escher_Sakai: ATP-dependent protease ATP-binding subunit HslU; LGAS_0920; phage(gi15834112)  7e-117  Click
11 925476..925490  attR    GATCATGTTCTAAAT  N/A  Click
Region 3, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1470694..1471920  PHAGE_Strept_1: transferase; LGAS_1480; phage(gi39653711)  3e-67  Click
2 1471993..1472613  hypothetical protein; LGAS_1481  N/A  Click
3 1474513..1475778  PHAGE_Klebsi_phiKO2: putative portal protein; LGAS_1483; phage(gi46402090)  2e-70  Click
4 1475775..1476446  PHAGE_Geobac_E2: putative Clp peptidase; LGAS_1484; phage(gi148747731)  2e-37  Click
5 1476466..1477644  PHAGE_Azospi_Cd: Phage major capsid protein; LGAS_1485; phage(gi168495136)  1e-35  Click
6 1477939..1478322  PHAGE_Geobac_E2: putative head-tail adaptor; LGAS_1486; phage(gi148747735)  5e-07  Click
7 1478177..1478719  PHAGE_Bacill_IEBH: holin; LGAS_1487; phage(gi197261577)  5e-26  Click
8 1478719..1479597  PHAGE_Clostr_phiSM101: autolytic lysozyme; LGAS_1488; phage(gi110804057)  9e-15  Click
9 1480069..1480308  hypothetical protein; LGAS_1489  N/A  Click
10 1480338..1481999  PHAGE_Bacill_Gamma: site-specific recombinase; LGAS_1490; phage(gi77020163)  2e-35  Click
11 1482038..1483558  PHAGE_Geobac_E2: putative recombinase; LGAS_1491; phage(gi148747753)  2e-29  Click