| Definition | Pediococcus pentosaceus ATCC 25745, complete genome. |
|---|---|
| Accession | NC_008525 |
| Length | 1,832,387 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 68 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 777251..778126 | PHAGE_Adoxop_granulovirus: ORF_24; PEPE_0740; phage(gi32698563) | 8e-06 | Click |
| 2 | 778119..779036 | hypothetical protein; PEPE_0741 | N/A | Click |
| 3 | 779046..779585 | PHAGE_Bacill_1: hypothetical protein BV1_gp07; PEPE_0742; phage(gi158348411) | 6e-11 | Click |
| 4 | 779890..780117 | hypothetical protein; PEPE_0743 | N/A | Click |
| 5 | complement(780257..780460) | hypothetical protein; PEPE_0744 | N/A | Click |
| 6 | 780673..780697 | attL CTATATTAATATGATTCGGGAGAGA | N/A | Click |
| 7 | complement(780798..781937) | PHAGE_Lactob_LF1: phage integrase; PEPE_0745; phage(gi418489411) | 2e-95 | Click |
| 8 | complement(782084..782488) | hypothetical protein; PEPE_0746 | N/A | Click |
| 9 | complement(782546..782983) | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1458; PEPE_0747; phage(gi41179295) | 4e-09 | Click |
| 10 | complement(782987..783337) | PHAGE_Lactob_phiadh: Rad protein; PEPE_0748; phage(gi9633005) | 3e-15 | Click |
| 11 | 783594..783803 | hypothetical protein; PEPE_0749 | N/A | Click |
| 12 | 783817..783996 | hypothetical protein; PEPE_0750 | N/A | Click |
| 13 | complement(783986..784126) | hypothetical protein; PEPE_0751 | N/A | Click |
| 14 | 784187..784912 | PHAGE_Entero_phiFL3A: anti-repressor protein; PEPE_0752; phage(gi281416221) | 6e-57 | Click |
| 15 | 784915..785259 | PHAGE_Lactob_Sha1: hypothetical protein; PEPE_0753; phage(gi418489836) | 2e-06 | Click |
| 16 | 785259..785357 | hypothetical protein; PEPE_0754 | N/A | Click |
| 17 | 785441..785548 | hypothetical protein; PEPE_0755 | N/A | Click |
| 18 | 785535..785996 | PHAGE_Lactob_phig1e: hypothetical protein phig1ep58; PEPE_0756; phage(gi254854755) | 1e-06 | Click |
| 19 | 785993..786649 | PHAGE_Staphy_StB20: ERF-like recombinase; PEPE_0757; phage(gi431809741) | 2e-25 | Click |
| 20 | 786652..787050 | PHAGE_Lactob_AQ113: single-strand DNA binding protein; PEPE_0758; phage(gi446730277) | 3e-16 | Click |
| 21 | 787088..787972 | PHAGE_Bacill_Fah: DnaA analog, DnaD domain protein; PEPE_0759; phage(gi89152512) | 3e-17 | Click |
| 22 | 787956..789203 | PHAGE_Lactob_Nu: putative DnaB-like helicase; PEPE_0760; phage(gi78000024) | 1e-64 | Click |
| 23 | 789206..789622 | hypothetical protein; PEPE_0761 | N/A | Click |
| 24 | 789619..790038 | PHAGE_Lactob_Nu: putative Holliday junction resolvase; PEPE_0762; phage(gi78000012) | 9e-36 | Click |
| 25 | 790025..790234 | hypothetical protein; PEPE_0763 | N/A | Click |
| 26 | 790247..790477 | hypothetical protein; PEPE_0764 | N/A | Click |
| 27 | 790491..790631 | hypothetical protein; PEPE_0765 | N/A | Click |
| 28 | 790646..791017 | N-acetylmuramoyl-L-alanine amidase; PEPE_0766 | N/A | Click |
| 29 | 791061..791525 | hypothetical protein; PEPE_0767 | N/A | Click |
| 30 | 791537..791830 | PHAGE_Lactob_LP65: hypothetical protein LP65_gp038; PEPE_0768; phage(gi56693086) | 5e-05 | Click |
| 31 | 791832..791996 | hypothetical protein; PEPE_0769 | N/A | Click |
| 32 | 791997..792563 | PHAGE_Entero_phiEf11: asch domain protein; PEPE_0770; phage(gi282598726) | 2e-11 | Click |
| 33 | 792563..792751 | hypothetical protein; PEPE_0771 | N/A | Click |
| 34 | 792744..792911 | hypothetical protein; PEPE_0772 | N/A | Click |
| 35 | 793070..793366 | PHAGE_Lactob_LP65: hypothetical protein LP65_gp009; PEPE_0773; phage(gi56693057) | 2e-15 | Click |
| 36 | 793366..793707 | PHAGE_Lactoc_P087: hypothetical protein P087_gp18; PEPE_0774; phage(gi229604987) | 3e-12 | Click |
| 37 | 793710..794129 | hypothetical protein; PEPE_0775 | N/A | Click |
| 38 | 794201..794374 | hypothetical protein; PEPE_0776 | N/A | Click |
| 39 | 794441..794899 | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1443; PEPE_0777; phage(gi41179310) | 5e-09 | Click |
| 40 | 795080..795322 | PHAGE_Vibrio_KVP40: hypothetical protein KVP40.0296; PEPE_0778; phage(gi34419530) | 2e-10 | Click |
| 41 | 795368..795508 | hypothetical protein; PEPE_0779 | N/A | Click |
| 42 | 795647..796228 | hypothetical protein; PEPE_0780 | N/A | Click |
| 43 | 796309..796806 | PHAGE_Lactob_AQ113: phage terminase small subunit; PEPE_0781; phage(gi446730229) | 1e-16 | Click |
| 44 | 796796..798067 | PHAGE_Lactob_Lj965: putative terminase large subunit; PEPE_0782; phage(gi41179257) | 2e-173 | Click |
| 45 | 798075..799478 | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1438; PEPE_0783; phage(gi41179315) | 2e-102 | Click |
| 46 | 799459..800424 | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1437; PEPE_0784; phage(gi41179316) | 7e-61 | Click |
| 47 | 800427..800642 | hypothetical protein; PEPE_0785 | N/A | Click |
| 48 | 800752..801363 | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1434; PEPE_0786; phage(gi41179319) | 3e-19 | Click |
| 49 | 801378..802292 | PHAGE_Bacill_BCJA1c: major capsid protein; PEPE_0787; phage(gi56694908) | 5e-103 | Click |
| 50 | 802343..802576 | PHAGE_Lactob_8014_B1: minor capsid protein; PEPE_0788; phage(gi431809803) | 3e-13 | Click |
| 51 | 802588..802959 | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1432; PEPE_0789; phage(gi41179321) | 7e-16 | Click |
| 52 | 802964..803272 | hypothetical protein; PEPE_0790 | N/A | Click |
| 53 | 803265..803606 | PHAGE_Lactob_Lj928: putative major tail protein; PEPE_0791; phage(gi41179323) | 5e-14 | Click |
| 54 | 803631..804014 | PHAGE_Entero_phiEf11: putative major structural protein; PEPE_0792; phage(gi282598740) | 2e-15 | Click |
| 55 | 804026..804610 | PHAGE_Lactoc_ul36: major tail protein; PEPE_0793; phage(gi21716118) | 3e-14 | Click |
| 56 | 804687..804965 | PHAGE_Staphy_GH15: putative major tail protein; PEPE_0794; phage(gi418488062) | 1e-07 | Click |
| 57 | 805105..805446 | PHAGE_Entero_phiEf11: putative phage protein; PEPE_0795; phage(gi282598743) | 3e-17 | Click |
| 58 | 805593..805871 | hypothetical protein; PEPE_0796 | N/A | Click |
| 59 | 805855..808875 | PHAGE_Lactob_1: putative tape measure protein; PEPE_0797; phage(gi62327110) | 0.0 | Click |
| 60 | 808875..809639 | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1425c; PEPE_0798; phage(gi41179329) | 7e-56 | Click |
| 61 | 809639..812599 | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1425; PEPE_0799; phage(gi41179330) | 5e-137 | Click |
| 62 | 812583..812996 | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1424; PEPE_0800; phage(gi41179331) | 2e-05 | Click |
| 63 | 813000..814829 | PHAGE_Lactob_phig1e: minor capsid protein; PEPE_0801; phage(gi23455814) | 8e-103 | Click |
| 64 | 814841..815581 | PHAGE_Lactob_phig1e: minor capsid protein; PEPE_0802; phage(gi23455815) | 2e-05 | Click |
| 65 | 815581..815922 | PHAGE_Staphy_ROSA: ORF032; PEPE_0803; phage(gi66395996) | 1e-08 | Click |
| 66 | 815919..816074 | PHAGE_Clostr_phiCD6356: hypothetical protein; PEPE_0804; phage(gi326536868) | 4e-07 | Click |
| 67 | 816137..816739 | hypothetical protein; PEPE_0805 | N/A | Click |
| 68 | 816782..817183 | PHAGE_Strept_3: putative holin protein; PEPE_0806; phage(gi28876267) | 5e-22 | Click |
| 69 | 817167..818483 | PHAGE_Lactoc_phiLC3: LysB; PEPE_0807; phage(gi45597397) | 4e-81 | Click |
| 70 | 818728..818752 | attR CTATATTAATATGATTCGGGAGAGA | N/A | Click |
Region 2, total : 56 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 978338..978351 | attL TCTATTTTAGCATT | N/A | Click |
| 2 | complement(992637..993014) | PHAGE_Staphy_11: holin; PEPE_0983; phage(gi29028615) | 1e-05 | Click |
| 3 | complement(993024..993287) | PHAGE_Lactob_Sha1: phage-related holin; PEPE_0984; phage(gi418489822) | 1e-36 | Click |
| 4 | complement(993287..994450) | PHAGE_Lactob_Sha1: endolysin; PEPE_0985; phage(gi418489821) | 4e-38 | Click |
| 5 | complement(994462..994821) | PHAGE_Lactob_Sha1: prophage Lp2 protein 53-like protein; PEPE_0986; phage(gi418489820) | 3e-49 | Click |
| 6 | complement(994855..995103) | PHAGE_Lactoc_bIL285: Orf59; PEPE_0987; phage(gi13095739) | 1e-10 | Click |
| 7 | complement(995116..995319) | hypothetical protein; PEPE_0988 | N/A | Click |
| 8 | complement(995312..995539) | hypothetical protein; PEPE_0989 | N/A | Click |
| 9 | complement(995532..998720) | PHAGE_Lactob_Sha1: tail fiber; PEPE_0990; phage(gi418489817) | 2e-30 | Click |
| 10 | complement(998737..1001127) | PHAGE_Lactob_Sha1: minor structural protein gp89-like protein; PEPE_0991; phage(gi418489816) | 0.0 | Click |
| 11 | complement(1001148..1002914) | PHAGE_Lactob_Sha1: minor structural protein gp75-like protein; PEPE_0992; phage(gi418489815) | 0.0 | Click |
| 12 | complement(1002992..1007752) | PHAGE_Strept_DT1: putative tail component protein; PEPE_0993; phage(gi29165636) | 2e-164 | Click |
| 13 | complement(1007784..1007969) | PHAGE_Lactob_Sha1: hypothetical protein; PEPE_0994; phage(gi418489813) | 8e-06 | Click |
| 14 | complement(1008014..1008388) | hypothetical protein; PEPE_0995 | N/A | Click |
| 15 | complement(1008462..1009115) | PHAGE_Lactob_phiAT3: putative major tail protein; PEPE_0996; phage(gi48697269) | 2e-22 | Click |
| 16 | complement(1009131..1009511) | PHAGE_Strept_Sfi21: putative tail component protein; PEPE_0997; phage(gi9632947) | 4e-16 | Click |
| 17 | complement(1009511..1009918) | PHAGE_Strept_DT1: putative tail component protein; PEPE_0998; phage(gi9632427) | 9e-32 | Click |
| 18 | complement(1009921..1010268) | PHAGE_Strept_Sfi19: putative head-tail joining protein; PEPE_0999; phage(gi9632902) | 9e-14 | Click |
| 19 | complement(1010258..1010590) | PHAGE_Lactob_Sha1: phage protein DNA packaging protein; PEPE_1000; phage(gi418489807) | 4e-45 | Click |
| 20 | complement(1010664..1011896) | PHAGE_Lactob_Sha1: HK97 family phage major capsid protein; PEPE_1001; phage(gi418489806) | 0.0 | Click |
| 21 | complement(1011896..1012651) | PHAGE_Lactob_Sha1: protease subunit of ATP-dependent Clp protease; PEPE_1002; phage(gi418489805) | 3e-132 | Click |
| 22 | complement(1012629..1013792) | PHAGE_Lactob_Sha1: phage portal protein; PEPE_1003; phage(gi418489804) | 0.0 | Click |
| 23 | complement(1013795..1013989) | PHAGE_Lactob_Sha1: phage head-tail joining protein; PEPE_1004; phage(gi418489803) | 5e-30 | Click |
| 24 | complement(1013979..1015877) | PHAGE_Lactob_Sha1: phage terminase-like protein large subunit; PEPE_1005; phage(gi418489802) | 0.0 | Click |
| 25 | complement(1015880..1016338) | PHAGE_Lactob_Sha1: P27 family phage terminase small subunit; PEPE_1006; phage(gi418489801) | 9e-81 | Click |
| 26 | complement(1016535..1017044) | PHAGE_Lactob_Sha1: restriction endonuclease; PEPE_1007; phage(gi418489800) | 7e-86 | Click |
| 27 | complement(1017582..1018013) | PHAGE_Lactob_phig1e: hypothetical protein phig1ep41; PEPE_1008; phage(gi23455797) | 6e-12 | Click |
| 28 | complement(1018004..1018396) | hypothetical protein; PEPE_1009 | N/A | Click |
| 29 | complement(1018476..1018940) | hypothetical protein; PEPE_1010 | N/A | Click |
| 30 | complement(1018933..1018980) | hypothetical protein; PEPE_1011 | N/A | Click |
| 31 | complement(1018992..1019324) | hypothetical protein; PEPE_1012 | N/A | Click |
| 32 | complement(1019325..1019696) | hypothetical protein; PEPE_1013 | N/A | Click |
| 33 | complement(1019711..1019851) | hypothetical protein; PEPE_1014 | N/A | Click |
| 34 | complement(1019861..1020079) | hypothetical protein; PEPE_1015 | N/A | Click |
| 35 | complement(1020076..1020486) | PHAGE_Lactob_Nu: putative Holliday junction resolvase; PEPE_1016; phage(gi78000012) | 1e-43 | Click |
| 36 | complement(1020487..1020603) | hypothetical protein; PEPE_1017 | N/A | Click |
| 37 | complement(1020603..1021421) | PHAGE_Lactob_phig1e: zinc finger protein; PEPE_1018; phage(gi23455786) | 4e-62 | Click |
| 38 | complement(1021402..1022145) | PHAGE_Strept_M102: hypothetical protein M102_gp21; PEPE_1019; phage(gi242345592) | 2e-71 | Click |
| 39 | complement(1022146..1022823) | PHAGE_Lactob_Sha1: hypothetical protein; PEPE_1020; phage(gi418489846) | 1e-84 | Click |
| 40 | complement(1022834..1023232) | PHAGE_Lactob_AQ113: single-strand DNA binding protein; PEPE_1021; phage(gi446730277) | 1e-15 | Click |
| 41 | complement(1023235..1023891) | PHAGE_Staphy_StB20: ERF-like recombinase; PEPE_1022; phage(gi431809741) | 1e-25 | Click |
| 42 | complement(1023888..1024349) | PHAGE_Lactob_phig1e: hypothetical protein phig1ep58; PEPE_1023; phage(gi254854755) | 6e-07 | Click |
| 43 | complement(1024342..1024443) | hypothetical protein; PEPE_1024 | N/A | Click |
| 44 | 1024575..1024841 | PHAGE_Strept_2: hypothetical protein SpyM3_0968; PEPE_1025; phage(gi28876252) | 7e-05 | Click |
| 45 | complement(1024798..1025055) | hypothetical protein; PEPE_1026 | N/A | Click |
| 46 | complement(1025055..1025153) | hypothetical protein; PEPE_1027 | N/A | Click |
| 47 | complement(1025153..1025362) | hypothetical protein; PEPE_1028 | N/A | Click |
| 48 | complement(1025365..1025451) | hypothetical protein; PEPE_1029 | N/A | Click |
| 49 | 1025707..1025910 | hypothetical protein; PEPE_1030 | N/A | Click |
| 50 | complement(1025935..1026135) | hypothetical protein; PEPE_1031 | N/A | Click |
| 51 | complement(1026181..1026984) | PHAGE_Lactoc_T: hypothetical protein BK5-Tp38; PEPE_1032; phage(gi14251162) | 5e-79 | Click |
| 52 | complement(1027000..1027188) | PHAGE_Lactob_phiadh: hypothetical protein phiadhp12; PEPE_1033; phage(gi9633012) | 4e-06 | Click |
| 53 | 1027454..1027801 | PHAGE_Lactob_phiadh: Rad protein; PEPE_1034; phage(gi9633005) | 5e-19 | Click |
| 54 | 1027907..1028215 | PHAGE_Lactob_LF1: Lj965 prophage repressor-like protein; PEPE_1035; phage(gi418489418) | 2e-15 | Click |
| 55 | 1028279..1029406 | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1464; PEPE_1036; phage(gi41179289) | 7e-19 | Click |
| 56 | 1029553..1029750 | hypothetical protein; PEPE_1037 | N/A | Click |
| 57 | 1029923..1029936 | attR TCTATTTTAGCATT | N/A | Click |
| 58 | 1029975..1031048 | PHAGE_Bacill_BCJA1c: integrase; PEPE_1038; phage(gi56694872) | 7e-44 | Click |