| Definition | Clostridium perfringens ATCC 13124, complete genome. |
|---|---|
| Accession | NC_008261 |
| Length | 3,256,683 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 50 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1085226..1087037 | PHAGE_Clostr_phiCTP1: putative anaerobic ribonucleoside-triphosphate reductase; CPF_0922; phage(gi304360708) | 0.0 | Click |
| 2 | 1087034..1087492 | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp47; CPF_0923; phage(gi304360709) | 1e-31 | Click |
| 3 | 1087687..1088409 | hypothetical protein; CPF_0924 | N/A | Click |
| 4 | complement(1088615..1088833) | hypothetical protein; CPF_0925 | N/A | Click |
| 5 | 1089060..1089071 | attL TTTCGTCAAAAA | N/A | Click |
| 6 | complement(1089077..1090141) | PHAGE_Strept_PH15: putative integrase; CPF_0926; phage(gi190151416) | 7e-39 | Click |
| 7 | complement(1090234..1090698) | PHAGE_Clostr_phi3626: Gp23 protein; CPF_0927; phage(gi20065986) | 3e-27 | Click |
| 8 | complement(1090714..1091217) | PHAGE_Clostr_phiCD27: putative phage repressor; CPF_0928; phage(gi209901281) | 6e-23 | Click |
| 9 | 1091369..1091605 | PHAGE_Clostr_phiCD27: putative phage repressor; CPF_0929; phage(gi209901282) | 9e-16 | Click |
| 10 | 1091617..1092348 | PHAGE_Brocho_NF5: gp30; CPF_0930; phage(gi327197615) | 2e-20 | Click |
| 11 | 1092374..1092628 | hypothetical protein; CPF_0932 | N/A | Click |
| 12 | complement(1092597..1093286) | PHAGE_Amsact_: hypothetical protein AMV156; CPF_0931; phage(gi9964470) | 2e-05 | Click |
| 13 | 1093445..1093747 | hypothetical protein; CPF_0933 | N/A | Click |
| 14 | 1093749..1093928 | PHAGE_Clostr_phi3626: Gp28 protein; CPF_0934; phage(gi20065991) | 1e-09 | Click |
| 15 | 1093939..1094121 | PHAGE_Clostr_PhiS63: gp28; CPF_0935; phage(gi388570672) | 7e-10 | Click |
| 16 | 1094210..1094374 | hypothetical protein; CPF_0936 | N/A | Click |
| 17 | 1094418..1094603 | hypothetical protein; CPF_0937 | N/A | Click |
| 18 | 1094603..1095514 | PHAGE_Lister_A006: gp41; CPF_0938; phage(gi157325458) | 4e-86 | Click |
| 19 | 1095516..1096385 | PHAGE_Lister_A006: gp42; CPF_0939; phage(gi157325459) | 9e-84 | Click |
| 20 | 1096403..1097116 | PHAGE_Lister_A118: gp49; CPF_0940; phage(gi16798836) | 3e-35 | Click |
| 21 | 1097117..1097290 | hypothetical protein; CPF_0941 | N/A | Click |
| 22 | 1097284..1097670 | PHAGE_Clostr_phiCD27: putative endodeoxyribonuclease; CPF_0942; phage(gi209901305) | 9e-21 | Click |
| 23 | 1097820..1098467 | hypothetical protein; CPF_0943 | N/A | Click |
| 24 | complement(1098850..1098933) | tRNA | N/A | Click |
| 25 | 1099026..1099499 | PHAGE_Clostr_phiSM101: probable sigma factor; CPF_0945; phage(gi110804038) | 8e-24 | Click |
| 26 | 1099769..1099843 | tRNA | N/A | Click |
| 27 | 1099982..1101157 | PHAGE_Ralsto_phiRSA1: hypothetical protein RPRSA1_gp18; CPF_0947; phage(gi145708092) | 2e-09 | Click |
| 28 | 1101226..1101693 | PHAGE_Strept_6: putative terminase small subunit; CPF_0948; phage(gi28876466) | 2e-39 | Click |
| 29 | 1101686..1103050 | PHAGE_Clostr_phiCD38_2: terminase large subunit; CPF_0949; phage(gi333798109) | 1e-19 | Click |
| 30 | 1103064..1103873 | hypothetical protein; CPF_0950 | N/A | Click |
| 31 | 1103937..1105439 | PHAGE_Bacill_IEBH: portal protein; CPF_0951; phage(gi197261560) | 3e-11 | Click |
| 32 | 1105423..1107060 | PHAGE_Clostr_phiC2: putative head morphogenesis protein; CPF_0952; phage(gi134287339) | 1e-31 | Click |
| 33 | 1107073..1107297 | PHAGE_Clostr_phiC2: hypothetical protein phiC2p05; CPF_0953; phage(gi134287340) | 1e-11 | Click |
| 34 | 1107325..1107942 | hypothetical protein; CPF_0954 | N/A | Click |
| 35 | 1108036..1108641 | PHAGE_Strept_PH15: hypothetical protein phiPH15_gp36; CPF_0955; phage(gi190151451) | 5e-24 | Click |
| 36 | 1108666..1109571 | PHAGE_Bacill_IEBH: main capsid protein; CPF_0956; phage(gi197261563) | 9e-69 | Click |
| 37 | 1109586..1109855 | PHAGE_Clostr_phiC2: hypothetical protein phiC2p08; CPF_0957; phage(gi134287343) | 6e-07 | Click |
| 38 | 1109891..1110253 | PHAGE_Bacill_PBC1: hypothetical protein; CPF_0958; phage(gi389060332) | 2e-14 | Click |
| 39 | 1110257..1110583 | hypothetical protein; CPF_0959 | N/A | Click |
| 40 | 1110583..1110966 | PHAGE_Bacill_PBC1: putative minor capsid protein 2; CPF_0960; phage(gi389060334) | 2e-08 | Click |
| 41 | 1110966..1111352 | hypothetical protein; CPF_0961 | N/A | Click |
| 42 | 1111362..1111820 | PHAGE_Bacill_PBC1: major capsid protein gpP; CPF_0962; phage(gi389060336) | 2e-11 | Click |
| 43 | 1111833..1112201 | hypothetical protein; CPF_0963 | N/A | Click |
| 44 | 1112290..1112523 | hypothetical protein; CPF_0964 | N/A | Click |
| 45 | 1112564..1115776 | PHAGE_Clostr_phiCP34O: phage-related minor tail protein; CPF_0965; phage(gi422935445) | 2e-60 | Click |
| 46 | 1115780..1116133 | PHAGE_Brocho_BL3: gp18; CPF_0966; phage(gi327409410) | 4e-23 | Click |
| 47 | 1116156..1116422 | PHAGE_Clostr_phiSM101: hypothetical protein; CPF_0967; phage(gi110804063) | 1e-35 | Click |
| 48 | 1116489..1116869 | PHAGE_Clostr_phiSM101: hypothetical protein; CPF_0968; phage(gi110804056) | 3e-44 | Click |
| 49 | 1116905..1122013 | PHAGE_Entero_phiFL3A: PblB-like tail protein; CPF_0969; phage(gi281416271) | 5e-31 | Click |
| 50 | 1122032..1122280 | PHAGE_Clostr_phiSM101: hypothetical protein; CPF_0970; phage(gi110804071) | 1e-40 | Click |
| 51 | 1122294..1122710 | PHAGE_Clostr_phiCTP1: predicted holin; CPF_0971; phage(gi304360690) | 8e-35 | Click |
| 52 | 1122751..1123167 | PHAGE_Clostr_phiSM101: hypothetical protein; CPF_0972; phage(gi110804061) | 1e-25 | Click |
| 53 | 1123253..1124281 | PHAGE_Clostr_phiSM101: autolytic lysozyme; CPF_0973; phage(gi110804057) | 0.0 | Click |
| 54 | 1128060..1128071 | attR TTTCGTCAAAAA | N/A | Click |
Region 2, total : 47 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1781006..1782667) | PHAGE_Clostr_phiSM101: autolytic lysozyme; CPF_1562; phage(gi110804057) | 2e-14 | Click |
| 2 | complement(1782833..1783201) | hypothetical protein; CPF_1563 | N/A | Click |
| 3 | 1783389..1783775 | hypothetical protein; CPF_1564 | N/A | Click |
| 4 | complement(1783902..1784054) | hypothetical protein; CPF_1565 | N/A | Click |
| 5 | complement(1784095..1784580) | ybaK/ebsC protein; CPF_1566 | N/A | Click |
| 6 | 1784599..1784625 | attL TTAAATCATTTATAATTATACAATAAA | N/A | Click |
| 7 | complement(1784747..1785049) | PHAGE_Clostr_PhiS63: gp22; CPF_1567; phage(gi388570651) | 1e-25 | Click |
| 8 | complement(1785241..1786269) | PHAGE_Clostr_phiSM101: autolytic lysozyme; CPF_1568; phage(gi110804057) | 0.0 | Click |
| 9 | complement(1786323..1786805) | PHAGE_Clostr_PhiS63: gp20; CPF_1569; phage(gi388570649) | 3e-57 | Click |
| 10 | complement(1786826..1787059) | PHAGE_Clostr_phiSM101: hypothetical protein; CPF_1570; phage(gi110804030) | 2e-38 | Click |
| 11 | complement(1787141..1787326) | PHAGE_Clostr_PhiS63: gp18; CPF_1571; phage(gi388570647) | 3e-22 | Click |
| 12 | complement(1787345..1789843) | PHAGE_Clostr_phi3626: Gp18 protein; CPF_1572; phage(gi20065981) | 5e-32 | Click |
| 13 | complement(1789859..1791739) | PHAGE_Clostr_phi3626: minor structural protein; CPF_1573; phage(gi20065979) | 2e-33 | Click |
| 14 | complement(1791790..1794849) | PHAGE_Clostr_phi3626: Gp15 protein; CPF_1574; phage(gi20065978) | 0.0 | Click |
| 15 | complement(1794854..1795564) | PHAGE_Clostr_phi3626: Gp14 protein; CPF_1575; phage(gi20065977) | 2e-21 | Click |
| 16 | complement(1795557..1798811) | PHAGE_Clostr_phi3626: putative tape-measure protein; CPF_1576; phage(gi20065976) | 0.0 | Click |
| 17 | complement(1798847..1799200) | hypothetical protein; CPF_1577 | N/A | Click |
| 18 | complement(1799362..1799679) | PHAGE_Clostr_phi3626: Gp12 protein; CPF_1578; phage(gi20065975) | 2e-21 | Click |
| 19 | complement(1799682..1800284) | PHAGE_Clostr_phi3626: major tail protein; CPF_1579; phage(gi20065974) | 2e-30 | Click |
| 20 | complement(1800301..1800648) | PHAGE_Clostr_phi3626: Gp10 protein; CPF_1580; phage(gi20065973) | 5e-32 | Click |
| 21 | complement(1800657..1801085) | PHAGE_Clostr_phi3626: Gp9 protein; CPF_1581; phage(gi20065972) | 4e-49 | Click |
| 22 | complement(1801094..1801423) | PHAGE_Clostr_phi3626: Gp8 protein; CPF_1582; phage(gi20065971) | 6e-42 | Click |
| 23 | complement(1801416..1801694) | PHAGE_Clostr_phi3626: Gp7 protein; CPF_1583; phage(gi20065970) | 7e-29 | Click |
| 24 | complement(1801706..1802890) | PHAGE_Clostr_phi3626: major capsid protein; CPF_1584; phage(gi20065969) | 2e-173 | Click |
| 25 | complement(1802931..1803536) | PHAGE_Clostr_phi3626: putative prohead protease; CPF_1585; phage(gi20065968) | 1e-101 | Click |
| 26 | complement(1803526..1804773) | PHAGE_Clostr_phi3626: putative portal protein; CPF_1586; phage(gi20065966) | 0.0 | Click |
| 27 | complement(1804774..1806513) | PHAGE_Clostr_phi3626: putative terminase large subunit; CPF_1587; phage(gi20065965) | 0.0 | Click |
| 28 | complement(1806506..1807018) | PHAGE_Clostr_phi3626: putative terminase small subunit; CPF_1588; phage(gi20065964) | 9e-80 | Click |
| 29 | complement(1807521..1808342) | hypothetical protein; CPF_1589 | N/A | Click |
| 30 | complement(1808517..1809065) | PHAGE_Clostr_phi3626: putative recombinase; CPF_1590; phage(gi20066008) | 2e-77 | Click |
| 31 | complement(1809160..1809513) | hypothetical protein; CPF_1591 | N/A | Click |
| 32 | complement(1809572..1809778) | hypothetical protein; CPF_1592 | N/A | Click |
| 33 | complement(1809920..1810381) | PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp73; CPF_1593; phage(gi90592709) | 2e-18 | Click |
| 34 | complement(1810518..1810709) | hypothetical protein; CPF_1594 | N/A | Click |
| 35 | complement(1810917..1811306) | PHAGE_Clostr_phi3626: putative single stranded DNA binding protein; CPF_1595; phage(gi20066002) | 6e-44 | Click |
| 36 | complement(1811321..1811467) | hypothetical protein; CPF_1596 | N/A | Click |
| 37 | complement(1811479..1812762) | PHAGE_Clostr_phi3626: putative helicase; CPF_1597; phage(gi20065998) | 0.0 | Click |
| 38 | complement(1812773..1813513) | PHAGE_Clostr_phi3626: Gp34 protein; CPF_1598; phage(gi20065997) | 3e-72 | Click |
| 39 | complement(1813541..1813684) | hypothetical protein; CPF_1599 | N/A | Click |
| 40 | complement(1813702..1813881) | PHAGE_Clostr_PhiS63: gp28; CPF_1600; phage(gi388570672) | 5e-11 | Click |
| 41 | complement(1813907..1814137) | hypothetical protein; CPF_1601 | N/A | Click |
| 42 | complement(1814143..1814640) | hypothetical protein; CPF_1602 | N/A | Click |
| 43 | complement(1814690..1814878) | DNA-binding protein; CPF_1603 | N/A | Click |
| 44 | 1815028..1815372 | PHAGE_Clostr_CD119: RepR; putative repressor; CPF_1604; phage(gi90592681) | 2e-13 | Click |
| 45 | 1815423..1817012 | PHAGE_Megavi_lba: hypothetical protein; CPF_1605; phage(gi448825518) | 8e-16 | Click |
| 46 | 1817080..1817934 | PHAGE_Synech_S_MbCM6: putative cytosine-specific protein; CPF_1606; phage(gi418487528) | 4e-12 | Click |
| 47 | 1818046..1818543 | PHAGE_Clostr_phi3626: Gp23 protein; CPF_1607; phage(gi20065986) | 4e-10 | Click |
| 48 | 1818556..1820064 | PHAGE_Strept_phiNJ2: putative recombinase; CPF_1608; phage(gi414090258) | 4e-28 | Click |
| 49 | 1820435..1820461 | attR TTAAATCATTTATAATTATACAATAAA | N/A | Click |