Definition Escherichia coli 536, complete genome.
Accession NC_008253
Length 4,938,920
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 60 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1181448..1181459  attL    ATAAAAAGTGGA  N/A  Click
2 complement(1184723..1185184)  PHAGE_Vibrio_KVP40: NMN adenylyl tranferase; ECP_1129; phage(gi34419395)  6e-05  Click
3 complement(1185194..1185847)  23S rRNA pseudouridine synthase E; ECP_1130  N/A  Click
4 1186019..1187269  isocitrate dehydrogenase; ECP_1131  N/A  Click
5 complement(1187383..1187871)  PHAGE_Entero_HK630: integrase; ECP_1132; phage(gi428782814)  4e-32  Click
6 complement(1188067..1188846)  PROPHAGE_Escher_CFT073: transposase/IS protein; ECP_1133; phage(gi26248359)  1e-142  Click
7 complement(1188846..1189868)  PROPHAGE_Escher_CFT073: transposase; ECP_1134; phage(gi26248360)  0.0  Click
8 complement(1189882..1190484)  PHAGE_Entero_HK630: integrase; ECP_1135; phage(gi428782814)  8e-08  Click
9 complement(1190474..1190710)  excisionase; ECP_1136  N/A  Click
10 complement(1190850..1191089)  PHAGE_Entero_phiP27: hypothetical protein P27p03; ECP_1137; phage(gi18249867)  2e-07  Click
11 complement(1191137..1191355)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip097; ECP_1138; phage(gi20065892)  3e-33  Click
12 complement(1191454..1191669)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip098; ECP_1139; phage(gi20065893)  3e-34  Click
13 complement(1192089..1192769)  PHAGE_Entero_2008: putative exonuclease; ECP_1140; phage(gi209427739)  7e-131  Click
14 complement(1192766..1193551)  PHAGE_Entero_HK630: Bet protein; ECP_1141; phage(gi428782823)  5e-150  Click
15 complement(1193557..1193853)  PHAGE_Stx2_c_86: host-nuclease inhibitor protein Gam; ECP_1142; phage(gi116222045)  3e-52  Click
16 complement(1193928..1194314)  PHAGE_Entero_HK225: Kil protein; ECP_1143; phage(gi428782413)  6e-30  Click
17 complement(1194610..1194987)  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0305; ECP_1144; phage(gi41179237)  1e-32  Click
18 complement(1194965..1196026)  PHAGE_Lactob_Lj965: hypothetical protein Ljo_0304; ECP_1145; phage(gi41179236)  4e-66  Click
19 complement(1196107..1196799)  PHAGE_Entero_ST104: CI; ECP_1146; phage(gi46358671)  1e-110  Click
20 1196910..1197137  PHAGE_Salmon_ST160: Cro; ECP_1147; phage(gi318065926)  9e-24  Click
21 1197162..1197707  PHAGE_Entero_mEp237: CII protein; ECP_1148; phage(gi435439306)  5e-64  Click
22 1197704..1198723  PHAGE_Entero_4795: putative replication protein O; ECP_1149; phage(gi157166011)  2e-114  Click
23 1198720..1199433  PHAGE_Escher_HK639: replication protein 14; ECP_1150; phage(gi356870655)  2e-111  Click
24 complement(1199512..1199940)  hypothetical protein; ECP_1151  N/A  Click
25 complement(1199937..1200314)  hypothetical protein; ECP_1152  N/A  Click
26 1200582..1201037  PHAGE_Cronob_phiES15: hypothetical protein; ECP_1153; phage(gi401817579)  2e-60  Click
27 1201200..1201490  PHAGE_Entero_mEp237: hypothetical protein; ECP_1154; phage(gi435439317)  1e-48  Click
28 1201487..1201849  PHAGE_Entero_mEp237: Holliday junction resolvase RusA; ECP_1155; phage(gi435439318)  5e-62  Click
29 1202072..1202455  PHAGE_Entero_2008: antitermination protein Q; ECP_1156; phage(gi209427762)  2e-56  Click
30 complement(1202644..1203726)  outer membrane porin protein LC precursor; ECP_1157  N/A  Click
31 1204055..1204204  hypothetical protein; ECP_1158  N/A  Click
32 1204315..1204530  PHAGE_Stx2_c_II: holin; ECP_1159; phage(gi302393164)  1e-28  Click
33 1204530..1205027  PHAGE_Entero_cdtI: lysin; ECP_1160; phage(gi148609440)  5e-91  Click
34 1205024..1205485  PHAGE_Entero_HK630: cell lysis protein Rz; ECP_1161; phage(gi428782852)  7e-81  Click
35 complement(1205517..1205810)  PHAGE_Entero_HK630: Bor protein; ECP_1162; phage(gi428782854)  4e-47  Click
36 1206291..1206617  TonB-like membrane protein; ECP_1163  N/A  Click
37 1206824..1207006  hypothetical protein; ECP_1164  N/A  Click
38 1207236..1207487  hypothetical protein; ECP_1165  N/A  Click
39 1207569..1208114  PHAGE_Entero_HK630: terminase small subunit nu1; ECP_1166; phage(gi428782788)  3e-82  Click
40 1208089..1210014  PHAGE_Entero_HK630: terminase large subunit A; ECP_1167; phage(gi428782789)  0.0  Click
41 1210011..1210217  PHAGE_Entero_HK630: head-tail connector W; ECP_1168; phage(gi428782790)  4e-32  Click
42 1210214..1211815  PHAGE_Entero_HK630: portal protein B; ECP_1169; phage(gi428782791)  0.0  Click
43 1211796..1213115  PHAGE_Entero_HK630: head maturation protease C; ECP_1170; phage(gi428782792)  0.0  Click
44 1213125..1213457  PHAGE_Entero_HK630: head decoration protein D; ECP_1171; phage(gi428782794)  1e-56  Click
45 1213513..1214538  PHAGE_Entero_HK630: major head subunit E; ECP_1172; phage(gi428782795)  0.0  Click
46 1214580..1214975  PHAGE_Entero_HK630: DNA packaging protein Fi; ECP_1173; phage(gi428782796)  4e-57  Click
47 1214987..1215340  PHAGE_Entero_HK630: head-tail connector Fii; ECP_1174; phage(gi428782797)  3e-62  Click
48 1215352..1215930  PHAGE_Entero_HK630: minor tail protein Z; ECP_1175; phage(gi428782798)  7e-101  Click
49 1215927..1216322  PHAGE_Entero_HK630: minor tail protein U; ECP_1176; phage(gi428782799)  1e-70  Click
50 1216330..1217070  PHAGE_Entero_HK630: major tail protein V; ECP_1177; phage(gi428782800)  3e-134  Click
51 1217086..1217508  PHAGE_Entero_HK630: minor tail protein G; ECP_1178; phage(gi428782801)  1e-72  Click
52 1217490..1217924  PHAGE_Entero_HK630: tail assembly protein GT; ECP_1179; phage(gi428782802)  1e-79  Click
53 1217917..1220484  PHAGE_Entero_HK630: tail length tape measure protein H; ECP_1180; phage(gi428782803)  0.0  Click
54 1220481..1220810  PHAGE_Entero_HK630: minor tail protein M; ECP_1181; phage(gi428782804)  5e-56  Click
55 1220810..1221508  PHAGE_Entero_HK630: minor tail protein L; ECP_1182; phage(gi428782805)  1e-134  Click
56 1221514..1222257  PHAGE_Entero_mEp460: tail fiber component; ECP_1183; phage(gi428782332)  2e-149  Click
57 1222155..1222826  PHAGE_Entero_HK630: tail component I; ECP_1184; phage(gi428782807)  3e-121  Click
58 1222887..1226369  PHAGE_Entero_HK630: tail fiber J; ECP_1185; phage(gi428782808)  0.0  Click
59 1226428..1228488  PHAGE_Escher_bV_EcoS_AKFV33: putative tail fiber protein; ECP_1186; phage(gi388570497)  1e-80  Click
60 1228485..1228763  PHAGE_Escher_bV_EcoS_AKFV33: hypothetical protein; ECP_1187; phage(gi388570496)  8e-07  Click
61 1228776..1229069  PHAGE_Halomo_1: hypothetical protein HAPgp19; ECP_1188; phage(gi167832364)  2e-07  Click
62 1238551..1238562  attR    ATAAAAAGTGGA  N/A  Click
Region 2, total : 7 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2677328..2677750  PHAGE_Cyanop_MED4_213: membrane protein; ECP_2542; phage(gi472340360)  2e-06  Click
2 2677825..2678346  PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; ECP_2543; phage(gi17546156)  5e-13  Click
3 2678571..2679173  PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; ECP_2544; phage(gi17546155)  1e-63  Click
4 complement(2679346..2680218)  hypothetical protein; ECP_2545  N/A  Click
5 complement(2680230..2681324)  PHAGE_Synech_S_SM2: zinc-containing alcohol dehydrogenase superfamily protein; ECP_2546; phage(gi326781942)  9e-16  Click
6 complement(2681357..2682355)  PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; ECP_2547; phage(gi163932195)  7e-06  Click
7 complement(2682380..2683891)  PHAGE_Plankt_PaV_LD: ABC transporter; ECP_2548; phage(gi371496158)  1e-11  Click