Definition Yersinia pestis Antiqua plasmid pMT, complete sequence.
Accession NC_008120
Length 96,471
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 72 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 89..1111  PROPHAGE_Escher_CFT073: transposase; YPA_MT0001; phage(gi26248360)  0.0  Click
2 1111..1890  PROPHAGE_Escher_CFT073: transposase/IS protein; YPA_MT0002; phage(gi26248359)  1e-142  Click
3 complement(2024..2632)  PHAGE_Entero_HK630: tail fiber assembly protein; YPA_MT0003; phage(gi428782810)  3e-66  Click
4 complement(2934..5822)  PHAGE_Salmon_SSU5: putative phage tail fiber protein; YPA_MT0004; phage(gi410491431)  3e-118  Click
5 complement(5903..6520)  PHAGE_Entero_phiP27: hypothetical protein P27p57; YPA_MT0005; phage(gi18249921)  3e-22  Click
6 complement(6538..11169)  PHAGE_Salmon_SSU5: putative phage tail protein; YPA_MT0006; phage(gi410491430)  0.0  Click
7 complement(11191..11778)  PHAGE_Salmon_SSU5: putative phage tail protein; YPA_MT0007; phage(gi410491429)  1e-105  Click
8 complement(11766..12524)  PHAGE_Salmon_SSU5: putative phage tail protein; YPA_MT0008; phage(gi410491428)  1e-149  Click
9 complement(12556..13254)  PHAGE_Salmon_SSU5: putative minor tail protein L; YPA_MT0009; phage(gi410491427)  4e-137  Click
10 complement(13344..13679)  PHAGE_Salmon_SSU5: putative minor tail protein M; YPA_MT0010; phage(gi410491426)  3e-59  Click
11 complement(13721..15244)  PHAGE_Salmon_SSU5: putative tail tape measure protein; YPA_MT0011; phage(gi410491425)  0.0  Click
12 complement(15254..18298)  PHAGE_Salmon_SSU5: putative tail tape measure protein; YPA_MT0012; phage(gi410491425)  0.0  Click
13 complement(18306..18539)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0013; phage(gi410491424)  7e-39  Click
14 complement(18656..18973)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0014; phage(gi410491423)  2e-52  Click
15 complement(19033..19779)  PHAGE_Salmon_SSU5: putative Ig-like domain-containing protein; YPA_MT0015; phage(gi410491422)  9e-135  Click
16 complement(19854..20237)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0016; phage(gi410491421)  6e-68  Click
17 complement(20239..20712)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0017; phage(gi410491420)  4e-84  Click
18 complement(20703..21047)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0018; phage(gi410491419)  1e-59  Click
19 complement(21145..21978)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0019; phage(gi410491418)  9e-155  Click
20 complement(21978..22412)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0020; phage(gi410491417)  1e-75  Click
21 complement(22456..23118)  PHAGE_Salmon_SSU5: putative Ig-like domain-containing protein; YPA_MT0021; phage(gi410491416)  6e-114  Click
22 complement(23193..24068)  PHAGE_Salmon_SSU5: putative major capsid protein; YPA_MT0022; phage(gi410491415)  4e-164  Click
23 complement(24095..24928)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0023; phage(gi410491414)  3e-149  Click
24 complement(24951..26525)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0024; phage(gi410491413)  0.0  Click
25 complement(26559..27815)  PHAGE_Salmon_SSU5: putative terminase large subunit; YPA_MT0025; phage(gi410491412)  0.0  Click
26 complement(27818..28459)  PHAGE_Salmon_SSU5: putative DNA-binding protein; YPA_MT0026; phage(gi410491411)  9e-116  Click
27 complement(28655..28921)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0027; phage(gi410491540)  9e-45  Click
28 complement(28931..29821)  PHAGE_Salmon_SSU5: putative ABC transporter ATP-binding protein; YPA_MT0028; phage(gi410491539)  1e-170  Click
29 complement(29827..30081)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0029; phage(gi410491538)  4e-42  Click
30 complement(30074..30712)  PHAGE_Salmon_SSU5: putative ABC transporter ATP-binding protein; YPA_MT0030; phage(gi410491537)  6e-113  Click
31 complement(30709..31377)  PHAGE_Salmon_SSU5: putative ParB-like nuclease domain-containing protein; YPA_MT0031; phage(gi410491536)  8e-118  Click
32 complement(31377..32075)  PHAGE_Salmon_SSU5: putative ParB-like nuclease domain-containing protein; YPA_MT0032; phage(gi410491535)  1e-127  Click
33 32140..33699  PHAGE_Salmon_SSU5: putative helicase; YPA_MT0033; phage(gi410491534)  0.0  Click
34 33702..33980  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0034; phage(gi410491533)  1e-44  Click
35 34040..34462  PHAGE_Salmon_SSU5: putative lipoprotein; YPA_MT0035; phage(gi410491532)  4e-65  Click
36 34467..34994  PHAGE_Salmon_SSU5: putative repressor of phase 1 flagellin; YPA_MT0036; phage(gi410491531)  6e-82  Click
37 35317..35967  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0037; phage(gi410491530)  5e-118  Click
38 complement(36389..36847)  PROPHAGE_Salmon_Ty2: transposase; YPA_MT0038; phage(gi29143766)  3e-85  Click
39 complement(37056..37625)  PHAGE_Salmon_SSU5: putative ribonuclease H-like domain-containing protein; YPA_MT0039; phage(gi410491487)  2e-105  Click
40 complement(37638..38384)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0091; phage(gi410491486)  4e-138  Click
41 complement(38374..40290)  PHAGE_Salmon_SSU5: putative exonuclease subunit 2; YPA_MT0040; phage(gi410491485)  0.0  Click
42 complement(40520..41605)  PHAGE_Salmon_SSU5: putative exonuclease subunit 1; YPA_MT0041; phage(gi410491483)  0.0  Click
43 42212..43042  periplasmic protein; YPA_MT0042  N/A  Click
44 complement(43402..44046)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0043; phage(gi410491480)  1e-121  Click
45 44377..44388  attL    TTGCCTGTTTTT  N/A  Click
46 44791..45855  PHAGE_Salmon_SSU5: putative replication protein RepA; YPA_MT0044; phage(gi410491479)  0.0  Click
47 complement(46424..46636)  PHAGE_Salmon_SSU5: putative Cre-associated protein; YPA_MT0045; phage(gi410491478)  4e-35  Click
48 complement(46636..46971)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0046; phage(gi410491477)  5e-54  Click
49 complement(46968..47147)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0092; phage(gi410491476)  3e-22  Click
50 complement(47188..47463)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0047; phage(gi410491475)  3e-47  Click
51 complement(47531..47935)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0048; phage(gi410491474)  9e-72  Click
52 48005..49027  PROPHAGE_Escher_CFT073: transposase; YPA_MT0049; phage(gi26248360)  0.0  Click
53 49138..49800  PROPHAGE_Escher_CFT073: transposase/IS protein; YPA_MT0050; phage(gi26248359)  1e-120  Click
54 49816..50136  hypothetical protein; YPA_MT0093  N/A  Click
55 complement(50403..51233)  PHAGE_Salmon_SSU5: putative SPFH domain / band 7 protein; YPA_MT0051; phage(gi410491472)  1e-153  Click
56 complement(51237..51437)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0094; phage(gi410491471)  1e-29  Click
57 complement(51528..52604)  PHAGE_Salmon_SSU5: putative RecA-like recombinase; YPA_MT0052; phage(gi410491470)  0.0  Click
58 complement(52607..52873)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0053; phage(gi410491469)  2e-43  Click
59 complement(52873..53817)  PHAGE_Salmon_SSU5: DNA polymerase I; YPA_MT0054; phage(gi410491468)  0.0  Click
60 complement(53878..54906)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0055; phage(gi410491467)  0.0  Click
61 complement(55026..55499)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0056; phage(gi410491466)  3e-75  Click
62 56002..56565  PHAGE_Salmon_SSU5: putative phage transcriptional regulator AlpA-like protein; YPA_MT0057; phage(gi410491464)  1e-67  Click
63 complement(56595..57038)  PHAGE_Salmon_SSU5: hypothetical protein; YPA_MT0058; phage(gi410491463)  7e-75  Click
64 complement(57035..60559)  PHAGE_Salmon_SSU5: DNA polymerase III alpha subunit; YPA_MT0059; phage(gi410491462)  0.0  Click
65 complement(60740..61975)  PHAGE_Salmon_SSU5: putative porphyrin biosynthetic protein; YPA_MT0060; phage(gi410491460)  0.0  Click
66 complement(62072..63958)  PHAGE_Salmon_SSU5: putative porphyrin biosynthetic protein; YPA_MT0061; phage(gi410491459)  0.0  Click
67 complement(63997..64776)  PROPHAGE_Escher_CFT073: transposase/IS protein; YPA_MT0062; phage(gi26248359)  1e-142  Click
68 complement(64776..65798)  PROPHAGE_Escher_CFT073: transposase; YPA_MT0063; phage(gi26248360)  0.0  Click
69 complement(65825..66397)  PHAGE_Salmon_SSU5: putative porphyrin biosynthetic protein; YPA_MT0064; phage(gi410491459)  2e-93  Click
70 complement(66507..66719)  hypothetical protein; YPA_MT0065  N/A  Click
71 66987..67373  hypothetical protein; YPA_MT0067  N/A  Click
72 complement(67368..67712)  PHAGE_Gifsy_1: bacteriophage integrase protein; YPA_MT0066; phage(gi169257266)  3e-08  Click
73 complement(67735..68472)  PHAGE_Salmon_vB_SosS_Oslo: integrase; YPA_MT0068; phage(gi399528791)  2e-08  Click
74 74662..74673  attR    TTGCCTGTTTTT  N/A  Click