Definition Yersinia pestis Nepal516 plasmid pMT, complete sequence.
Accession NC_008118
Length 100,918
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 69 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 87..1109  PROPHAGE_Escher_CFT073: transposase; YPN_MT0001; phage(gi26248360)  0.0  Click
2 1001..1013  attL    GAAAAAAGAGTAT  N/A  Click
3 1109..1888  PROPHAGE_Escher_CFT073: transposase/IS protein; YPN_MT0002; phage(gi26248359)  1e-142  Click
4 complement(2022..2630)  PHAGE_Entero_HK630: tail fiber assembly protein; YPN_MT0003; phage(gi428782810)  3e-66  Click
5 complement(2932..5820)  PHAGE_Salmon_SSU5: putative phage tail fiber protein; YPN_MT0004; phage(gi410491431)  3e-118  Click
6 complement(5901..6518)  PHAGE_Entero_phiP27: hypothetical protein P27p57; YPN_MT0005; phage(gi18249921)  3e-22  Click
7 complement(6536..11167)  PHAGE_Salmon_SSU5: putative phage tail protein; YPN_MT0006; phage(gi410491430)  0.0  Click
8 complement(11189..11776)  PHAGE_Salmon_SSU5: putative phage tail protein; YPN_MT0007; phage(gi410491429)  1e-105  Click
9 complement(11764..12522)  PHAGE_Salmon_SSU5: putative phage tail protein; YPN_MT0008; phage(gi410491428)  1e-149  Click
10 complement(12554..13252)  PHAGE_Salmon_SSU5: putative minor tail protein L; YPN_MT0009; phage(gi410491427)  4e-137  Click
11 complement(13342..13677)  PHAGE_Salmon_SSU5: putative minor tail protein M; YPN_MT0010; phage(gi410491426)  3e-60  Click
12 complement(13719..18296)  PHAGE_Salmon_SSU5: putative tail tape measure protein; YPN_MT0011; phage(gi410491425)  0.0  Click
13 complement(18304..18537)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0012; phage(gi410491424)  7e-39  Click
14 complement(18654..18971)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0013; phage(gi410491423)  2e-52  Click
15 complement(19031..19777)  PHAGE_Salmon_SSU5: putative Ig-like domain-containing protein; YPN_MT0014; phage(gi410491422)  9e-135  Click
16 complement(19852..20235)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0015; phage(gi410491421)  6e-68  Click
17 complement(20237..20710)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0016; phage(gi410491420)  4e-84  Click
18 complement(20701..21045)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0017; phage(gi410491419)  1e-59  Click
19 complement(21143..21976)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0018; phage(gi410491418)  9e-155  Click
20 complement(21976..22410)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0019; phage(gi410491417)  1e-75  Click
21 complement(22454..22654)  PHAGE_Salmon_SSU5: putative Ig-like domain-containing protein; YPN_MT0020; phage(gi410491416)  8e-28  Click
22 complement(22555..23046)  PHAGE_Salmon_SSU5: putative Ig-like domain-containing protein; YPN_MT0096; phage(gi410491416)  1e-62  Click
23 complement(23121..23996)  PHAGE_Salmon_SSU5: putative major capsid protein; YPN_MT0021; phage(gi410491415)  4e-164  Click
24 complement(24023..24394)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0022; phage(gi410491414)  8e-65  Click
25 complement(24468..24923)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0023; phage(gi410491414)  1e-78  Click
26 complement(24946..26535)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0024; phage(gi410491413)  0.0  Click
27 complement(26554..27810)  PHAGE_Salmon_SSU5: putative terminase large subunit; YPN_MT0025; phage(gi410491412)  0.0  Click
28 complement(27813..28454)  PHAGE_Salmon_SSU5: putative DNA-binding protein; YPN_MT0026; phage(gi410491411)  9e-116  Click
29 complement(28650..28916)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0027; phage(gi410491540)  9e-45  Click
30 complement(28926..29816)  PHAGE_Salmon_SSU5: putative ABC transporter ATP-binding protein; YPN_MT0028; phage(gi410491539)  1e-170  Click
31 complement(29822..30076)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0029; phage(gi410491538)  4e-42  Click
32 complement(30069..30707)  PHAGE_Salmon_SSU5: putative ABC transporter ATP-binding protein; YPN_MT0030; phage(gi410491537)  6e-113  Click
33 complement(30704..31372)  PHAGE_Salmon_SSU5: putative ParB-like nuclease domain-containing protein; YPN_MT0031; phage(gi410491536)  8e-118  Click
34 complement(31372..32070)  PHAGE_Salmon_SSU5: putative ParB-like nuclease domain-containing protein; YPN_MT0032; phage(gi410491535)  1e-127  Click
35 32135..33694  PHAGE_Salmon_SSU5: putative helicase; YPN_MT0033; phage(gi410491534)  0.0  Click
36 33697..33975  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0034; phage(gi410491533)  1e-44  Click
37 34035..34457  PHAGE_Salmon_SSU5: putative lipoprotein; YPN_MT0035; phage(gi410491532)  4e-65  Click
38 34462..34989  PHAGE_Salmon_SSU5: putative repressor of phase 1 flagellin; YPN_MT0036; phage(gi410491531)  6e-82  Click
39 35313..35963  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0037; phage(gi410491530)  5e-118  Click
40 complement(36914..37396)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0038; phage(gi410491527)  3e-86  Click
41 complement(37602..37883)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0039; phage(gi410491525)  5e-48  Click
42 complement(38083..38541)  PROPHAGE_Salmon_Ty2: transposase; YPN_MT0040; phage(gi29143766)  5e-84  Click
43 complement(38750..39319)  PHAGE_Salmon_SSU5: putative ribonuclease H-like domain-containing protein; YPN_MT0041; phage(gi410491487)  2e-105  Click
44 complement(39332..40078)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0095; phage(gi410491486)  4e-138  Click
45 complement(40068..41984)  PHAGE_Salmon_SSU5: putative exonuclease subunit 2; YPN_MT0042; phage(gi410491485)  0.0  Click
46 complement(42214..43299)  PHAGE_Salmon_SSU5: putative exonuclease subunit 1; YPN_MT0043; phage(gi410491483)  0.0  Click
47 43715..44737  periplasmic protein; YPN_MT0044  N/A  Click
48 complement(45097..45741)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0045; phage(gi410491480)  1e-121  Click
49 46486..47550  PHAGE_Salmon_SSU5: putative replication protein RepA; YPN_MT0046; phage(gi410491479)  0.0  Click
50 complement(48119..48334)  PHAGE_Salmon_SSU5: putative Cre-associated protein; YPN_MT0097; phage(gi410491478)  7e-35  Click
51 complement(48331..48666)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0047; phage(gi410491477)  5e-54  Click
52 complement(48663..48842)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0098; phage(gi410491476)  3e-22  Click
53 complement(48883..49158)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0048; phage(gi410491475)  3e-47  Click
54 complement(49226..49636)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0049; phage(gi410491474)  2e-76  Click
55 complement(49620..49991)  PHAGE_Salmon_SSU5: putative NinX-like protein; YPN_MT0050; phage(gi410491473)  5e-62  Click
56 complement(50145..50975)  PHAGE_Salmon_SSU5: putative SPFH domain / band 7 protein; YPN_MT0051; phage(gi410491472)  1e-153  Click
57 complement(50979..51179)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0099; phage(gi410491471)  1e-29  Click
58 complement(51270..52346)  PHAGE_Salmon_SSU5: putative RecA-like recombinase; YPN_MT0052; phage(gi410491470)  0.0  Click
59 complement(52349..52615)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0053; phage(gi410491469)  2e-43  Click
60 complement(52615..53559)  PHAGE_Salmon_SSU5: DNA polymerase I; YPN_MT0054; phage(gi410491468)  0.0  Click
61 complement(53620..54648)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0055; phage(gi410491467)  0.0  Click
62 complement(54768..55241)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0056; phage(gi410491466)  3e-74  Click
63 55744..56307  PHAGE_Salmon_SSU5: putative phage transcriptional regulator AlpA-like protein; YPN_MT0057; phage(gi410491464)  1e-67  Click
64 complement(56337..56780)  PHAGE_Salmon_SSU5: hypothetical protein; YPN_MT0058; phage(gi410491463)  7e-75  Click
65 complement(56777..60301)  PHAGE_Salmon_SSU5: DNA polymerase III alpha subunit; YPN_MT0059; phage(gi410491462)  0.0  Click
66 complement(60482..61717)  PHAGE_Salmon_SSU5: putative porphyrin biosynthetic protein; YPN_MT0060; phage(gi410491460)  0.0  Click
67 complement(61814..64180)  PHAGE_Salmon_SSU5: putative porphyrin biosynthetic protein; YPN_MT0061; phage(gi410491459)  0.0  Click
68 complement(64290..64502)  hypothetical protein; YPN_MT0062  N/A  Click
69 64765..65151  hypothetical protein; YPN_MT0064  N/A  Click
70 65062..65074  attR    GAAAAAAGAGTAT  N/A  Click
71 complement(65146..66249)  PHAGE_Salmon_vB_SosS_Oslo: integrase; YPN_MT0063; phage(gi399528791)  2e-21  Click