Definition Pseudomonas entomophila L48 chromosome, complete genome.
Accession NC_008027
Length 5,888,780
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2332314..2332330  attL    TCCTGCTGGTCGAAGGT  N/A  Click
2 complement(2335140..2336519)  PHAGE_Lactob_KC5a: putative minor tail protein; PSEEN2224; phage(gi90592623)  3e-07  Click
3 complement(2336728..2337399)  PHAGE_Camelp_virus: CMLV006; PSEEN2225; phage(gi18640240)  3e-10  Click
4 2337548..2337635  tRNA  N/A  Click
5 complement(2337757..2338806)  PHAGE_Pseudo_F10: Integrase; PSEEN2226; phage(gi148912793)  2e-99  Click
6 complement(2338808..2339053)  PHAGE_Pseudo_F10: hypothetical protein PPF10_gp029; PSEEN2227; phage(gi148912794)  1e-07  Click
7 complement(2339090..2339548)  hypothetical protein; PSEEN2228  N/A  Click
8 complement(2339815..2340111)  hypothetical protein; PSEEN2229  N/A  Click
9 complement(2340222..2340491)  PHAGE_Agroba_7_7_1: hypothetical protein; PSEEN2230; phage(gi435844421)  9e-08  Click
10 2340632..2342338  PHAGE_Burkho_KS5: gp28; PSEEN2231; phage(gi327198026)  4e-07  Click
11 2353163..2353179  attR    TCCTGCTGGTCGAAGGT  N/A  Click
Region 2, total : 12 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(4225154..4226719)  PHAGE_Entero_mEp460: side tail fiber protein; PSEEN3931; phage(gi428782336)  2e-05  Click
2 complement(4226860..4227753)  PHAGE_Burkho_phi1026b: gp58; PSEEN3932; phage(gi38707948)  2e-12  Click
3 4227968..4228930  agmatinase; PSEEN3933  N/A  Click
4 4229179..4230558  PHAGE_Aeromo_8t: hypothetical protein 44RRORF234c; PSEEN3934; phage(gi37651715)  2e-18  Click
5 complement(4230673..4230789)  hypothetical protein; PSEEN3935  N/A  Click
6 complement(4230926..4231819)  PHAGE_Burkho_phi1026b: gp58; PSEEN3936; phage(gi38707948)  1e-07  Click
7 4231926..4233092  hypothetical protein; PSEEN3937  N/A  Click
8 4233170..4233472  PHAGE_Burkho_2: gp7, putative addiction module killer protein; PSEEN3938; phage(gi134288691)  2e-17  Click
9 4233465..4233770  PHAGE_Burkho_2: gp6, putative addiction module antidote protein; PSEEN3939; phage(gi134288715)  5e-14  Click
10 complement(4233844..4234770)  hypothetical protein; PSEEN3940  N/A  Click
11 4235630..4235908  PROPHAGE_Xantho_33913: ISxac3 transposase; PSEEN3943; phage(gi21231087)  2e-27  Click
12 4235947..4236780  PROPHAGE_Escher_CFT073: transposase insF; PSEEN3944; phage(gi26250329)  5e-102  Click
Region 3, total : 64 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4418654..4419772  PHAGE_Synech_S_CBS2: DprA superfamily protein; PSEEN4126; phage(gi331027974)  4e-17  Click
2 complement(4419825..4420292)  recombination regulator RecX; PSEEN4127  N/A  Click
3 complement(4420301..4421368)  PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; PSEEN4128; phage(gi16130606)  1e-138  Click
4 complement(4421473..4421955)  hypothetical protein; PSEEN4129  N/A  Click
5 complement(4421997..4422497)  PHAGE_Pseudo_YuA: putative holin; PSEEN4130; phage(gi162135142)  6e-09  Click
6 complement(4422491..4423042)  PHAGE_Cronob_vB_CsaM_GAP31: lysozyme; PSEEN4131; phage(gi414086784)  1e-45  Click
7 complement(4423029..4423238)  PHAGE_Pseudo_B3: Com translational regulator; PSEEN4132; phage(gi56692616)  2e-07  Click
8 complement(4423416..4423799)  PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp23; PSEEN4134; phage(gi17313240)  5e-12  Click
9 complement(4423809..4425095)  PHAGE_Ralsto_RSB1: putative phage tail fiber protein; PSEEN4135; phage(gi197935891)  3e-27  Click
10 complement(4425038..4425643)  PHAGE_Entero_SfV: tail protein; PSEEN4136; phage(gi19548988)  5e-17  Click
11 complement(4425625..4426665)  PHAGE_Entero_SfV: tail protein; PSEEN4137; phage(gi19549009)  9e-57  Click
12 complement(4426655..4427053)  PHAGE_Entero_SfV: tail protein; PSEEN4138; phage(gi19549008)  3e-24  Click
13 complement(4427050..4427550)  PHAGE_Entero_SfV: tail protein; PSEEN4139; phage(gi19549007)  4e-20  Click
14 complement(4427576..4428631)  PHAGE_Entero_SfV: tail protein; PSEEN4140; phage(gi19549006)  9e-60  Click
15 complement(4428635..4429936)  PHAGE_Entero_SfV: tail/DNA circulation protein; PSEEN4141; phage(gi19549005)  7e-33  Click
16 complement(4429926..4431809)  PHAGE_Lactoc_jj50: tail tape measure; PSEEN4142; phage(gi115315642)  2e-18  Click
17 complement(4431809..4431904)  phage protein; PSEEN4143  N/A  Click
18 complement(4431940..4432236)  PHAGE_Entero_SfV: hypothetical protein SfVp13; PSEEN4144; phage(gi19549003)  8e-15  Click
19 complement(4432233..4432580)  PHAGE_Entero_SfV: hypothetical protein SfVp12; PSEEN4145; phage(gi19549002)  2e-17  Click
20 complement(4432638..4434134)  PHAGE_Entero_SfV: tail sheath protein; PSEEN4146; phage(gi19549001)  4e-142  Click
21 complement(4434134..4434316)  PHAGE_Entero_SfV: hypothetical protein SfVp10; PSEEN4147; phage(gi19549000)  9e-08  Click
22 complement(4434313..4434900)  PHAGE_Entero_SfV: hypothetical protein SfVp09; PSEEN4148; phage(gi19548999)  9e-11  Click
23 complement(4434957..4435991)  PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; PSEEN4149; phage(gi428782753)  1e-48  Click
24 complement(4436011..4436184)  PHAGE_Salmon_RE_2010: tail component protein; PSEEN4150; phage(gi418489702)  2e-06  Click
25 complement(4436192..4437037)  PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; PSEEN4151; phage(gi428782751)  3e-19  Click
26 complement(4437050..4439158)  PHAGE_Bacill_phiAGATE: putative tail lysin 2; PSEEN4152; phage(gi448260828)  3e-09  Click
27 complement(4439284..4439586)  hypothetical protein; PSEEN4153  N/A  Click
28 complement(4439599..4440108)  PHAGE_Vibrio_vB_VpaM_MAR: tail tube protein; PSEEN4154; phage(gi428782747)  2e-33  Click
29 complement(4440122..4441288)  PHAGE_Vibrio_vB_VpaM_MAR: tail sheath protein; PSEEN4155; phage(gi428782746)  1e-85  Click
30 complement(4441386..4441997)  PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp23; PSEEN4156; phage(gi17313240)  2e-11  Click
31 4441918..4442655  phage protein; PSEEN4157  N/A  Click
32 complement(4442745..4443176)  PHAGE_Entero_SfV: tail fibre assembly protein; PSEEN4158; phage(gi19549010)  2e-05  Click
33 complement(4443180..4445876)  PROPHAGE_Salmon_Ty2: variable tail fiber protein; PSEEN4159; phage(gi29143754)  5e-59  Click
34 complement(4445869..4446480)  PHAGE_Salmon_RE_2010: tail protein I; PSEEN4160; phage(gi418489712)  2e-49  Click
35 complement(4446482..4447363)  PHAGE_Pseudo_phiCTX: predicted baseplate or base of tail fiber; PSEEN4161; phage(gi17313237)  5e-82  Click
36 complement(4447360..4447686)  PHAGE_Vibrio_vB_VpaM_MAR: baseplate assembly protein; PSEEN4162; phage(gi428782737)  7e-22  Click
37 complement(4447769..4448326)  PHAGE_Pseudo_phiCTX: predicted baseplate; PSEEN4163; phage(gi17313235)  3e-19  Click
38 complement(4448323..4448820)  phage protein; PSEEN4164  N/A  Click
39 complement(4448940..4449284)  PHAGE_Pseudo_2: hypothetical protein SBWP25_0037; PSEEN4165; phage(gi281306696)  9e-05  Click
40 complement(4449292..4450590)  PHAGE_Salini_CW02: putative tail fiber; PSEEN4166; phage(gi423261944)  3e-09  Click
41 complement(4450798..4451178)  PHAGE_Escher_phAPEC8: putative tail fiber assembly protein; PSEEN4167; phage(gi448260444)  5e-09  Click
42 complement(4451191..4452411)  PHAGE_Salini_CW02: putative tail fiber; PSEEN4168; phage(gi423261944)  8e-05  Click
43 complement(4452408..4452602)  phage protein; PSEEN4169  N/A  Click
44 complement(4452586..4452969)  phage protein; PSEEN4170  N/A  Click
45 complement(4452969..4456946)  PHAGE_Entero_mEp237: central tail fiber; PSEEN4171; phage(gi435439285)  0.0  Click
46 complement(4457005..4457193)  PHAGE_Vibrio_VP882: hypothetical protein VPVV882_gp26; PSEEN4172; phage(gi126010868)  6e-05  Click
47 complement(4457207..4457539)  PHAGE_Pseudo_MP42: hypothetical protein; PSEEN4173; phage(gi399528628)  5e-19  Click
48 complement(4457539..4458546)  PHAGE_Pseudo_F10: hypothetical protein PPF10_gp025; PSEEN4174; phage(gi148912790)  3e-09  Click
49 complement(4458569..4459180)  PHAGE_Escher_HK75: tail assembly protein; PSEEN4175; phage(gi356870696)  2e-43  Click
50 complement(4459247..4460011)  PHAGE_Entero_HK225: minor tail protein; peptidase;; phage PSEEN4176(gi428782394)  2e-60  Click
51 complement(4460015..4460764)  PHAGE_Entero_mEp237: minor tail protein L; PSEEN4177; phage(gi435439282)  9e-74  Click
52 complement(4460783..4461115)  PHAGE_Entero_mEp390: minor tail protein; PSEEN4178; phage(gi428782678)  9e-32  Click
53 complement(4461131..4462396)  PHAGE_Gifsy_1: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; PSEEN4179; phage(gi169257221)  6e-32  Click
54 complement(4462463..4462717)  PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; PSEEN4180; phage(gi374531663)  6e-15  Click
55 complement(4462747..4463097)  hypothetical protein; PSEEN4181  N/A  Click
56 complement(4463112..4463603)  PHAGE_Pseudo_vB_PaeS_PMG1: putative major tail protein; PSEEN4182; phage(gi374531661)  2e-48  Click
57 complement(4463689..4463871)  phage protein; PSEEN4183  N/A  Click
58 complement(4463886..4464239)  pyocin R2_PP, holin; PSEEN4184  N/A  Click
59 complement(4464500..4464637)  hypothetical protein; PSEEN4185  N/A  Click
60 complement(4464707..4465453)  PHAGE_Pseudo_F116: transcriptional regulator; PSEEN4186; phage(gi56692918)  7e-39  Click
61 4465629..4468202  PHAGE_Cafete_BV_PW1: putative DNA mismatch repair protein MutS; PSEEN4187; phage(gi310831476)  3e-30  Click
62 4468342..4468665  ferredoxin; PSEEN4188  N/A  Click
63 complement(4469138..4470145)  PHAGE_Synech_S_CBS1: group2 RNA polymerase sigma factor; PSEEN4189; phage(gi356870821)  3e-37  Click
64 complement(4470251..4471036)  PHAGE_Clostr_phiZP2: putative lysozyme-peptidase; PSEEN4190; phage(gi392972703)  2e-15  Click