| Definition | Lactobacillus salivarius UCC118, complete genome. |
|---|---|
| Accession | NC_007929 |
| Length | 1,827,111 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 26 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 289715..289728 | attL AAAAAAGAAGATAA | N/A | Click |
| 2 | complement(289941..291086) | PROPHAGE_Oceano_HTE831: integrase; LSL_0236; phage(gi23097608) | 3e-62 | Click |
| 3 | complement(291235..291630) | hypothetical protein; LSL_0237 | N/A | Click |
| 4 | complement(291510..291944) | hypothetical protein; LSL_0238 | N/A | Click |
| 5 | complement(291941..292384) | PHAGE_Lactob_LF1: hypothetical protein; LSL_0239; phage(gi418489413) | 8e-05 | Click |
| 6 | complement(292377..293300) | PHAGE_Lactob_LF1: chromosome partitioning ATPase; LSL_0240; phage(gi418489414) | 2e-27 | Click |
| 7 | complement(293385..293603) | hypothetical protein; LSL_0241 | N/A | Click |
| 8 | complement(293709..294485) | PHAGE_Strept_pyogenes_315_2: putative repressor protein; LSL_0242; phage(gi28876261) | 3e-35 | Click |
| 9 | 294545..294694 | hypothetical protein; LSL_0243 | N/A | Click |
| 10 | 295016..295222 | hypothetical protein; LSL_0244 | N/A | Click |
| 11 | 295260..295475 | hypothetical protein; LSL_0245 | N/A | Click |
| 12 | complement(295477..296082) | hypothetical protein; LSL_0246 | N/A | Click |
| 13 | 296306..296497 | PHAGE_Strept_pyogenes_315_2: hypothetical protein SpyM3_0967; LSL_0247; phage(gi28876251) | 5e-07 | Click |
| 14 | 296500..296640 | hypothetical protein; LSL_0248 | N/A | Click |
| 15 | complement(296633..296806) | hypothetical protein; LSL_0249 | N/A | Click |
| 16 | 296879..297070 | PHAGE_Strept_pyogenes_315_2: hypothetical protein SpyM3_0971; LSL_0250; phage(gi28876255) | 7e-09 | Click |
| 17 | 297109..297837 | PHAGE_Strept_Sfi21: anti-repressor; LSL_0251; phage(gi9632967) | 7e-85 | Click |
| 18 | 297864..298049 | hypothetical protein; LSL_0252 | N/A | Click |
| 19 | 298348..298527 | hypothetical protein; LSL_0253 | N/A | Click |
| 20 | 298520..298657 | hypothetical protein; LSL_0254 | N/A | Click |
| 21 | 298644..298880 | hypothetical protein; LSL_0255 | N/A | Click |
| 22 | 298873..299589 | PHAGE_Brocho_NF5: gp49; LSL_0256; phage(gi327197634) | 4e-32 | Click |
| 23 | 299582..300565 | PHAGE_Strept_PH10: hypothetical protein PH10_gp11; LSL_0257; phage(gi238821328) | 2e-34 | Click |
| 24 | 300562..300765 | hypothetical protein; LSL_0258 | N/A | Click |
| 25 | 300769..301035 | hypothetical protein; LSL_0259 | N/A | Click |
| 26 | 301016..301432 | PHAGE_Strept_MM1: hypothetical protein MM1p17; LSL_0260; phage(gi15088759) | 1e-21 | Click |
| 27 | 301437..302165 | PHAGE_Clostr_phiCD38_2: hypothetical protein; LSL_0261; phage(gi333798150) | 3e-47 | Click |
| 28 | 306921..306934 | attR AAAAAAGAAGATAA | N/A | Click |
Region 2, total : 26 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 304728..305168 | PHAGE_Entero_N4: gp4; LSL_0271; phage(gi119952183) | 1e-04 | Click |
| 2 | 305179..305460 | hypothetical protein; LSL_0272 | N/A | Click |
| 3 | 305478..305660 | hypothetical protein; LSL_0273 | N/A | Click |
| 4 | 305735..306175 | PHAGE_Lactob_Lc_Nu: hypothetical protein; LSL_0274; phage(gi78000018) | 2e-07 | Click |
| 5 | 306272..306517 | hypothetical protein; LSL_0275 | N/A | Click |
| 6 | 306504..306944 | PHAGE_Xylell_Xfas53: inner membrane protein; LSL_0276; phage(gi273810461) | 1e-06 | Click |
| 7 | 307201..307863 | DNA packaging, phage associated; LSL_0277 | N/A | Click |
| 8 | 307904..308056 | hypothetical protein; LSL_0278 | N/A | Click |
| 9 | 308058..308588 | PHAGE_Lactob_Sha1: restriction endonuclease; LSL_0279; phage(gi418489800) | 6e-56 | Click |
| 10 | 308767..309240 | PHAGE_Strept_Sfi19: putative terminase small subunit; LSL_0280; phage(gi9632896) | 1e-41 | Click |
| 11 | 309240..311123 | PHAGE_Strept_Sfi19: putative terminase large subunit; LSL_0281; phage(gi9632897) | 0.0 | Click |
| 12 | 311113..311307 | PHAGE_Lactob_Sha1: phage head-tail joining protein; LSL_0282; phage(gi418489803) | 5e-07 | Click |
| 13 | 311307..312482 | PHAGE_Lactob_Sha1: phage portal protein; LSL_0283; phage(gi418489804) | 4e-129 | Click |
| 14 | 312463..313182 | PHAGE_Lactob_Sha1: protease subunit of ATP-dependent Clp protease; LSL_0284; phage(gi418489805) | 5e-79 | Click |
| 15 | 313172..314368 | PHAGE_Strept_Sfi19: major head protein; LSL_0285; phage(gi9632900) | 2e-125 | Click |
| 16 | 314380..314703 | PHAGE_Strept_Sfi19: putative DNA packaging protein; LSL_0286; phage(gi9632901) | 1e-18 | Click |
| 17 | 314696..315052 | PHAGE_Strept_Sfi19: putative head-tail joining protein; LSL_0287; phage(gi9632902) | 1e-12 | Click |
| 18 | 315045..315437 | PHAGE_Strept_Sfi19: putative tail component protein; LSL_0288; phage(gi9632903) | 5e-17 | Click |
| 19 | 315437..315814 | PHAGE_Lactob_phiAT3: putative tail component; LSL_0289; phage(gi48697268) | 8e-12 | Click |
| 20 | 315816..316520 | PHAGE_Strept_Sfi19: major tail protein; LSL_0290; phage(gi9632904) | 9e-29 | Click |
| 21 | 316570..316968 | PHAGE_Lactoc_bIL309: Orf49; LSL_0291; phage(gi13095854) | 1e-05 | Click |
| 22 | 316971..317177 | hypothetical protein; LSL_0292 | N/A | Click |
| 23 | 317225..317638 | hypothetical protein; LSL_0293 | N/A | Click |
| 24 | 317693..321418 | PHAGE_Lactob_phiAT3: putative minor tail protein; LSL_0294; phage(gi48697271) | 8e-135 | Click |
| 25 | 321431..322258 | PHAGE_Lactob_LF1: hypothetical protein; LSL_0295; phage(gi418489398) | 6e-61 | Click |
| 26 | 322274..324586 | PHAGE_Lactob_LF1: phage-associated protein/endopeptidase; LSL_0296; phage(gi418489399) | 1e-69 | Click |
Region 3, total : 39 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 770755..770766 | attL AACTGAAATCAA | N/A | Click |
| 2 | complement(777765..778886) | PHAGE_Lactob_Sha1: phage integrase; LSL_0729; phage(gi418489824) | 3e-93 | Click |
| 3 | complement(778905..779087) | PHAGE_Lister_LP_030_2: hypothetical protein; LSL_0730; phage(gi514051958) | 5e-12 | Click |
| 4 | complement(779231..779368) | hypothetical protein; LSL_0731 | N/A | Click |
| 5 | 779842..779853 | attL AATCTGTTACAA | N/A | Click |
| 6 | complement(780316..780747) | PHAGE_Hypert_Archaeal_Virus_2: IS element Dka2 orfA; LSL_0732; phage(gi300116744) | 1e-17 | Click |
| 7 | 780847..782124 | PHAGE_Clostr_c_st: putative IS transposase (OrfB); LSL_0733; phage(gi80159731) | 4e-54 | Click |
| 8 | 782443..782880 | hypothetical protein; LSL_0734 | N/A | Click |
| 9 | complement(782877..783053) | hypothetical protein; LSL_0735 | N/A | Click |
| 10 | complement(783066..783458) | PHAGE_Strept_pyogenes_315_2: hypothetical protein SpyM3_0972; LSL_0736; phage(gi28876256) | 3e-08 | Click |
| 11 | complement(783539..783682) | PHAGE_Strept_EJ_1: hypothetical protein EJ-1p03; LSL_0737; phage(gi39653677) | 2e-05 | Click |
| 12 | complement(783816..784106) | hypothetical protein; LSL_0738 | N/A | Click |
| 13 | complement(784134..784286) | hypothetical protein; LSL_0739 | N/A | Click |
| 14 | complement(784307..784957) | PHAGE_Lactob_prophage_Lj965: putative superinfection immunity protein; LSL_0740; phage(gi41179219) | 8e-31 | Click |
| 15 | complement(784990..785289) | PHAGE_Phage_OH2: predicted Zn peptidase; LSL_0741; phage(gi526118363) | 7e-09 | Click |
| 16 | complement(785426..785821) | PHAGE_Bacill_BCJA1c: repressor; LSL_0742; phage(gi56694874) | 7e-19 | Click |
| 17 | 785875..786024 | hypothetical protein; LSL_0743 | N/A | Click |
| 18 | 786003..786353 | PHAGE_Lactob_phiadh: hypothetical protein phiadhp12; LSL_0744; phage(gi9633012) | 7e-14 | Click |
| 19 | 786366..786497 | PHAGE_Lactob_Lc_Nu: putative antirepressor; LSL_0745; phage(gi78000000) | 2e-09 | Click |
| 20 | 786513..786944 | PHAGE_Lactob_Sha1: phage-related antirepressor; LSL_0746; phage(gi418489833) | 2e-14 | Click |
| 21 | 787035..787229 | hypothetical protein; LSL_0747 | N/A | Click |
| 22 | 787204..787515 | PHAGE_Lactob_KC5a: hypothetical protein; LSL_0748; phage(gi90592581) | 3e-18 | Click |
| 23 | 787622..787795 | hypothetical protein; LSL_0749 | N/A | Click |
| 24 | 787868..788026 | hypothetical protein; LSL_0750 | N/A | Click |
| 25 | 788013..788600 | hypothetical protein; LSL_0751 | N/A | Click |
| 26 | 788674..789897 | PHAGE_Thermo_THSA_485A: SNF2-related protein; LSL_0752; phage(gi397912655) | 4e-29 | Click |
| 27 | 789869..790102 | hypothetical protein; LSL_0753 | N/A | Click |
| 28 | 790099..790413 | PHAGE_Lactob_c5: hypothetical protein; LSL_0754; phage(gi418488176) | 1e-06 | Click |
| 29 | 790413..790826 | PHAGE_Thermo_THSA_485A: VRR-NUC domain-containing protein; LSL_0755; phage(gi397912645) | 4e-08 | Click |
| 30 | 790877..792457 | PHAGE_Strept_PH15: putative NTP-binding protein; LSL_0756; phage(gi190151434) | 2e-16 | Click |
| 31 | 792478..792945 | hypothetical protein; LSL_0757 | N/A | Click |
| 32 | 793126..794823 | PHAGE_Leucon_Lmd1: putative DNA polymerase; LSL_0758; phage(gi399528542) | 7e-45 | Click |
| 33 | 794824..795855 | PHAGE_Lister_P40: gp32; LSL_0759; phage(gi207270806) | 3e-10 | Click |
| 34 | 795859..796728 | PHAGE_Strept_pyogenes_315_6: putative DNA primase/helicase; LSL_0760; phage(gi28876472) | 1e-28 | Click |
| 35 | 796744..796968 | hypothetical protein; LSL_0761 | N/A | Click |
| 36 | 796988..797215 | hypothetical protein; LSL_0762 | N/A | Click |
| 37 | 797253..797323 | tRNA | N/A | Click |
| 38 | 797363..797617 | PHAGE_Bacill_phBC6A51: hypothetical protein BC1874; LSL_0763; phage(gi31415768) | 2e-08 | Click |
| 39 | 797586..798197 | PHAGE_Bacill_phBC6A51: hypothetical protein BC1875; LSL_0764; phage(gi31415769) | 6e-25 | Click |
| 40 | 798199..799146 | PHAGE_Lactoc_bIL309: integrase; LSL_0765; phage(gi13095806) | 4e-37 | Click |
| 41 | 799143..799535 | hypothetical protein; LSL_0766 | N/A | Click |
| 42 | 799558..800211 | PHAGE_Staphy_phiSauS_IPLA35: putative methyltransferase; LSL_0767; phage(gi215401130) | 1e-48 | Click |
| 43 | 804277..804288 | attR AATCTGTTACAA | N/A | Click |
| 44 | 811070..811081 | attR AACTGAAATCAA | N/A | Click |
Region 4, total : 25 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 805250..805576 | PHAGE_Staphy_StauST398_2: hypothetical protein; LSL_0781; phage(gi509139912) | 1e-19 | Click |
| 2 | 805701..806153 | PHAGE_Geobac_virus_E2: putative terminase small subunit; LSL_0782; phage(gi148747728) | 1e-23 | Click |
| 3 | 806143..807909 | PHAGE_Lactob_JCL1032: putative terminase large subunit; LSL_0783; phage(gi418489114) | 0.0 | Click |
| 4 | 807922..809166 | PHAGE_Paenib_phiIBB_Pl23: portal protein; LSL_0784; phage(gi526245013) | 1e-101 | Click |
| 5 | 809102..809851 | PHAGE_Paenib_phiIBB_Pl23: Clp protease-like protein; LSL_0785; phage(gi526245014) | 2e-71 | Click |
| 6 | 809848..810978 | PHAGE_Paenib_phiIBB_Pl23: major capsid protein; LSL_0786; phage(gi526245015) | 1e-89 | Click |
| 7 | 811170..811490 | PHAGE_Lactob_Sha1: phage protein DNA packaging protein; LSL_0787; phage(gi418489807) | 1e-06 | Click |
| 8 | 811480..811824 | phage head-tail joining protein; LSL_0788 | N/A | Click |
| 9 | 811836..812258 | PHAGE_Entero_EFAP_1: head-tail joining protein; LSL_0789; phage(gi225626389) | 2e-12 | Click |
| 10 | 812255..812626 | phage head-tail joining protein; LSL_0790 | N/A | Click |
| 11 | 812638..813288 | PHAGE_Entero_EFAP_1: major tail protein; LSL_0791; phage(gi225626387) | 3e-13 | Click |
| 12 | 813285..813674 | PHAGE_Entero_EFAP_1: hypothetical protein EFAP1_gp09; LSL_0792; phage(gi225626386) | 9e-06 | Click |
| 13 | 813722..813847 | hypothetical protein; LSL_0793 | N/A | Click |
| 14 | 813863..817687 | PHAGE_Lactoc_bIL286: tail protein; LSL_0794; phage(gi13095795) | 9e-97 | Click |
| 15 | 817699..818514 | PHAGE_Staphy_StauST398_2: phage tail tape measure protein-like protein; LSL_0795; phage(gi509139928) | 9e-15 | Click |
| 16 | 818514..820364 | PHAGE_Lactob_LF1: phage-associated protein/endopeptidase; LSL_0796; phage(gi418489399) | 4e-102 | Click |
| 17 | 820368..821126 | PHAGE_Staphy_SpaA1: N-acetylmuramoyl-L-alanine amidase; LSL_0797; phage(gi399498885) | 6e-23 | Click |
| 18 | 821278..821556 | hypothetical protein; LSL_0798 | N/A | Click |
| 19 | 821556..822632 | PHAGE_Lactob_phig1e: minor capsid protein; LSL_0799; phage(gi23455814) | 6e-52 | Click |
| 20 | 822713..823108 | hypothetical protein; LSL_0800 | N/A | Click |
| 21 | 823123..823524 | PHAGE_Bacill_PM1: hypothetical protein; LSL_0801; phage(gi472438326) | 9e-06 | Click |
| 22 | 823526..823708 | hypothetical protein; LSL_0802 | N/A | Click |
| 23 | 823761..824066 | hypothetical protein; LSL_0803 | N/A | Click |
| 24 | 824063..824389 | PHAGE_Lactob_LP65: hypothetical protein LP65_gp089; LSL_0804; phage(gi56693137) | 1e-11 | Click |
| 25 | 824401..825669 | PHAGE_Lactob_Lrm1: lysin; LSL_0805; phage(gi195661219) | 1e-122 | Click |