Definition Nitrosospira multiformis ATCC 25196 chromosome, complete genome.
Accession NC_007614
Length 3,184,243
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 19 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 53982..54362  PROPHAGE_Shewan_MR-1: ISSod6, transposase; Nmul_A0046; phage(gi24374783)  2e-21  Click
2 54212..54745  PROPHAGE_Brucel_1330: ISBm1, transposase orfB; Nmul_A0047; phage(gi23501425)  7e-31  Click
3 54842..55651  hypothetical protein; Nmul_A0048  N/A  Click
4 complement(55669..56367)  PHAGE_Burkho_phiE125: hypothetical protein phiE125p33; Nmul_A0049; phage(gi17975194)  1e-10  Click
5 complement(56539..58686)  PHAGE_Salmon_SSU5: putative guanosine polyphosphate pyrophospho hydrolase/synthetase; Nmul_A0050; phage(gi410491509)  2e-13  Click
6 complement(58820..59026)  DNA-directed RNA polymerase subunit omega; Nmul_A0051  N/A  Click
7 complement(59209..59841)  PHAGE_Cowpox_virus: CPXV195 protein; Nmul_A0052; phage(gi20178555)  2e-26  Click
8 complement(60014..60454)  PHAGE_Lausan: thioredoxin; Nmul_A0053; phage(gi327409778)  1e-14  Click
9 60899..61306  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; Nmul_A0054; phage(gi17546153)  8e-31  Click
10 61303..62151  PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; Nmul_A0055; phage(gi26249446)  4e-66  Click
11 complement(62655..63260)  hypothetical protein; Nmul_A0056  N/A  Click
12 complement(63303..64268)  PHAGE_Burkho_phiE125: putative capsid assembly protein/protease; Nmul_A0057; phage(gi17975166)  2e-25  Click
13 complement(64265..65140)  hypothetical protein; Nmul_A0058  N/A  Click
14 65501..65512  attL    CCGCATGAATAG  N/A  Click
15 complement(65529..66923)  hypothetical protein; Nmul_A0059  N/A  Click
16 complement(66910..67335)  PHAGE_Strept_TG1: P4 family phage/plasmid primase; Nmul_A0060; phage(gi410491938)  7e-12  Click
17 complement(67332..67607)  hypothetical protein; Nmul_A0061  N/A  Click
18 complement(68549..68803)  putative transcriptional regulator; Nmul_A0062  N/A  Click
19 complement(68916..69539)  hypothetical protein; Nmul_A0063  N/A  Click
20 complement(69640..70902)  PHAGE_Burkho_BcepC6B: putative integrase protein; Nmul_A0064; phage(gi48697215)  4e-45  Click
21 71088..71099  attR    CCGCATGAATAG  N/A  Click
Region 2, total : 19 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1467515..1467527  attL    GAAAAGGAGAAAG  N/A  Click
2 1476518..1476958  PHAGE_Acidia_virus: hypothetical protein ATV_gp61; Nmul_A1283; phage(gi75750453)  2e-05  Click
3 complement(1477111..1477971)  PHAGE_Marseillevirus: hypothetical protein MAR_ORF255; Nmul_A1284; phage(gi284504277)  1e-11  Click
4 complement(1477977..1478318)  cupin region; Nmul_A1285  N/A  Click
5 complement(1478446..1479075)  PHAGE_Bacill_SPO1: gp31; Nmul_A1286; phage(gi209972970)  7e-10  Click
6 complement(1479126..1480838)  PHAGE_Ectoca_1: EsV-1-65; Nmul_A1287; phage(gi13242537)  2e-25  Click
7 complement(1480884..1481297)  PHAGE_Feldma_virus: putative sensor histidine kinase; Nmul_A1288; phage(gi197322366)  8e-07  Click
8 complement(1481294..1483282)  PHAGE_Ectoca_1: EsV-1-65; Nmul_A1289; phage(gi13242537)  3e-11  Click
9 1483681..1484301  CHRD; Nmul_A1290  N/A  Click
10 complement(1484606..1484809)  PHAGE_Lactoc_bIL312: Csp; Nmul_A1291; phage(gi13095918)  7e-18  Click
11 1485371..1486390  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; Nmul_A1292; phage(gi116326757)  8e-71  Click
12 complement(1486405..1486956)  hypothetical protein; Nmul_A1293  N/A  Click
13 1488400..1488672  hypothetical protein; Nmul_A1294  N/A  Click
14 1488892..1488980  tRNA  N/A  Click
15 complement(1489080..1489949)  PROPHAGE_Xantho_33913: ISxac3 transposase; Nmul_A1295; phage(gi21231086)  1e-61  Click
16 complement(1489946..1490233)  PROPHAGE_Xantho_33913: ISxac3 transposase; Nmul_A1296; phage(gi21231087)  7e-08  Click
17 1490270..1490581  PROPHAGE_Escher_CFT073: insertion element IS2 transposase InsD; Nmul_A1297; phage(gi26249446)  2e-14  Click
18 complement(1490615..1490962)  PROPHAGE_Brucel_1330: IS5 family transposase orfB; Nmul_A1298; phage(gi23501423)  5e-32  Click
19 complement(1491004..1491372)  PROPHAGE_Brucel_1330: IS5 family transposase orfA; Nmul_A1299; phage(gi23501422)  7e-48  Click
20 1491478..1491741  PROPHAGE_Xantho_33913: IS1404 transposase; Nmul_A1300; phage(gi21232568)  2e-28  Click
21 1491768..1492598  PROPHAGE_Xantho_33913: IS1477 transposase; Nmul_A1301; phage(gi77747809)  7e-83  Click
22 1496418..1496430  attR    GAAAAGGAGAAAG  N/A  Click
Region 3, total : 24 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1640108..1640119  attL    CTCAGCCATAAC  N/A  Click
2 1644205..1645047  PROPHAGE_Xantho_33913: ISxac3 transposase; Nmul_A1432; phage(gi21231086)  9e-62  Click
3 1645214..1645225  attR    CTCAGCCATAAC  N/A  Click
4 complement(1645228..1646802)  hypothetical protein; Nmul_A1433  N/A  Click
5 1646989..1648032  PHAGE_Spirop_3x: hypothetical protein SkV1VCR23x_ORF3; Nmul_A1434; phage(gi160688404)  2e-07  Click
6 complement(1648110..1648841)  hypothetical protein; Nmul_A1435  N/A  Click
7 complement(1648834..1649958)  PHAGE_Burkho_BcepMigl: virion associated protein; Nmul_A1436; phage(gi431809923)  2e-42  Click
8 complement(1649951..1650565)  GCN5-related N-acetyltransferase; Nmul_A1437  N/A  Click
9 complement(1650562..1652082)  hypothetical protein; Nmul_A1438  N/A  Click
10 complement(1652092..1652526)  hypothetical protein; Nmul_A1439  N/A  Click
11 complement(1652560..1652943)  hypothetical protein; Nmul_A1440  N/A  Click
12 complement(1653126..1653398)  PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; Nmul_A1441; phage(gi17546158)  1e-25  Click
13 complement(1653421..1653969)  PROPHAGE_Ralsto_GMI1000: ISRSO12-transposase ORFB protein; Nmul_A1442; phage(gi17546158)  2e-29  Click
14 complement(1653951..1654229)  PROPHAGE_Ralsto_GMI1000: isrso12-transposase orfa protein; Nmul_A1443; phage(gi17546157)  4e-22  Click
15 complement(1654339..1656375)  PHAGE_Burkho_BcepIL02: virion-associated phage protein; Nmul_A1444; phage(gi238801679)  6e-62  Click
16 complement(1656372..1656926)  PHAGE_Iodoba_phiPLPE: gp15 putative lysozyme; Nmul_A1445; phage(gi197085629)  2e-12  Click
17 complement(1657268..1657645)  hypothetical protein; Nmul_A1446  N/A  Click
18 complement(1657851..1658441)  hypothetical protein; Nmul_A1447  N/A  Click
19 complement(1658432..1658782)  PHAGE_Prochl_P_SSM2: hypothetical protein; Nmul_A1448; phage(gi61805901)  6e-14  Click
20 complement(1658782..1659678)  PHAGE_Prochl_P_SSM2: phage tail fiber-like protein; Nmul_A1449; phage(gi61805900)  9e-18  Click
21 complement(1659682..1660299)  PHAGE_Burkho_BcepIL02: hypothetical protein BcepIL02_gp54; Nmul_A1450; phage(gi238801670)  1e-12  Click
22 complement(1660296..1660628)  hypothetical protein; Nmul_A1451  N/A  Click
23 complement(1660628..1660996)  hypothetical protein; Nmul_A1452  N/A  Click
24 complement(1661069..1661509)  hypothetical protein; Nmul_A1453  N/A  Click
25 complement(1661588..1662859)  PHAGE_Pseudo_F116: virion structural protein; Nmul_A1454; phage(gi56692923)  9e-60  Click
26 complement(1662874..1663836)  PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp15; Nmul_A1455; phage(gi116222007)  2e-09  Click