Definition Shigella boydii Sb227 plasmid pSB4_227, complete sequence.
Accession NC_007608
Length 126,697
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 37 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 24082..24609  PROPHAGE_Escher_MG1655: IS3 transposase B; SBO_P034; phage(gi16128284)  8e-101  Click
2 complement(24863..25366)  PROPHAGE_Escher_MG1655: IS1 transposase B; SBO_P035; phage(gi16131317)  2e-87  Click
3 26173..26943  PROPHAGE_Escher_CFT073: transposase; SBO_P036; phage(gi26248360)  1e-135  Click
4 26921..27109  PROPHAGE_Escher_CFT073: transposase; SBO_P037; phage(gi26248360)  7e-26  Click
5 27135..27461  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SBO_P038; phage(gi157166066)  3e-57  Click
6 27733..28344  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SBO_P039; phage(gi157166067)  2e-114  Click
7 28328..29110  PROPHAGE_Escher_CFT073: transposase/IS protein; SBO_P040; phage(gi26248359)  1e-130  Click
8 29171..29515  PROPHAGE_Escher_MG1655: IS1 transposase B; SBO_P041; phage(gi16131317)  2e-20  Click
9 29493..29699  PHAGE_Stx2_c_1717: transposase; SBO_P042; phage(gi209447153)  6e-07  Click
10 29837..31036  PHAGE_Entero_P1: ParA; SBO_P043; phage(gi46401682)  3e-177  Click
11 31036..32016  PHAGE_Entero_P1: ParB; SBO_P044; phage(gi46401681)  2e-99  Click
12 32272..32757  PROPHAGE_Shewan_MR-1: IS110 family transposase; SBO_P045; phage(gi24375433)  3e-24  Click
13 complement(33045..34091)  PHAGE_Entero_Sf6: putative transposase OrfB; SBO_P046; phage(gi41057343)  2e-52  Click
14 complement(34118..34420)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SBO_P047; phage(gi24373865)  1e-09  Click
15 35093..35377  hypothetical protein; SBO_P048  N/A  Click
16 35365..35850  hypothetical protein; SBO_P049  N/A  Click
17 35935..36855  PHAGE_Entero_Sf6: putative transposase OrfB; SBO_P050; phage(gi41057343)  2e-109  Click
18 complement(36913..38040)  PROPHAGE_Shewan_MR-1: IS110 family transposase; SBO_P051; phage(gi24375433)  9e-10  Click
19 38539..39327  VirF; SBO_P052  N/A  Click
20 39887..40096  PROPHAGE_Escher_MG1655: IS150 transposase A; SBO_P053; phage(gi16131428)  2e-25  Click
21 complement(40099..40986)  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SBO_P054; phage(gi157166067)  5e-168  Click
22 complement(40986..41312)  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SBO_P055; phage(gi157166066)  7e-58  Click
23 41459..41797  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SBO_P056; phage(gi24373865)  1e-09  Click
24 41824..42663  PHAGE_Entero_Sf6: putative transposase OrfB; SBO_P057; phage(gi41057343)  7e-168  Click
25 42859..43026  PHAGE_Haemop_SuMu: IS1414 transposase; SBO_P058; phage(gi418489079)  7e-13  Click
26 complement(43044..44771)  PHAGE_Acanth_mimivirus: putative leucine-rich repeat protein; SBO_P059; phage(gi311977765)  2e-06  Click
27 complement(45488..45772)  putative IS orf, fragment; SBO_P060  N/A  Click
28 complement(46115..46618)  PROPHAGE_Escher_MG1655: IS1 transposase B; SBO_P061; phage(gi16131317)  2e-87  Click
29 47047..47349  PROPHAGE_Xantho_33913: ISxac3 transposase; SBO_P062; phage(gi21231087)  6e-10  Click
30 47385..47573  PROPHAGE_Escher_CFT073: transposase insF; SBO_P063; phage(gi26249410)  6e-26  Click
31 complement(47613..48224)  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SBO_P064; phage(gi157166067)  6e-115  Click
32 complement(48496..48822)  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SBO_P065; phage(gi157166066)  3e-57  Click
33 complement(48874..50598)  PHAGE_Melano_entomopoxvirus: ORF MSV257 leucine rich repeat gene family protein, similar to Amsacta moorei entomopoxvirus Q3 ORF SW:P28854; SBO_P066; phage(gi9631420)  7e-07  Click
34 complement(51026..52723)  PHAGE_Acanth_mimivirus: putative leucine-rich repeat protein; SBO_P067; phage(gi311977765)  2e-09  Click
35 complement(53359..53541)  iso-IS1 ORF2; SBO_P068  N/A  Click
36 complement(54133..55164)  PROPHAGE_Escher_EDL933: putative transposase; SBO_P069; phage(gi15803522)  1e-145  Click
37 complement(55279..55668)  PROPHAGE_Shewan_MR-1: ISSod6, transposase; SBO_P070; phage(gi24374783)  1e-14  Click
Region 2, total : 24 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(75172..75459)  PHAGE_Entero_N15: gp48; SBO_P091; phage(gi9630515)  1e-42  Click
2 complement(75459..75770)  PHAGE_Entero_N15: gp49; SBO_P092; phage(gi9630516)  1e-48  Click
3 76235..77431  PROPHAGE_Escher_CFT073: transposase; SBO_P093; phage(gi26248352)  0.0  Click
4 77858..78361  PROPHAGE_Escher_MG1655: IS1 transposase B; SBO_P094; phage(gi16131317)  2e-87  Click
5 complement(78579..78845)  OspE2; SBO_P094a  N/A  Click
6 complement(79027..79314)  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SBO_P095; phage(gi24111655)  4e-30  Click
7 complement(79748..80875)  PROPHAGE_Shewan_MR-1: IS110 family transposase; SBO_P096; phage(gi24375433)  9e-10  Click
8 80939..81181  hypothetical protein; SBO_P097  N/A  Click
9 complement(81536..82441)  PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SBO_P098; phage(gi16130763)  4e-178  Click
10 complement(82399..82764)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SBO_P099; phage(gi17546153)  1e-45  Click
11 complement(82963..83181)  PROPHAGE_Escher_CFT073: transposase insC; SBO_P100; phage(gi26250372)  1e-10  Click
12 complement(83236..83874)  hypothetical protein; SBO_P101  N/A  Click
13 84072..84398  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SBO_P102; phage(gi157166066)  3e-57  Click
14 84670..85281  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SBO_P103; phage(gi157166067)  6e-115  Click
15 85650..87104  OspC3; SBO_P104  N/A  Click
16 87442..87744  PROPHAGE_Xantho_33913: ISxac3 transposase; SBO_P105; phage(gi21231087)  6e-10  Click
17 87885..88598  PROPHAGE_Escher_CFT073: transposase insF; SBO_P106; phage(gi26249410)  6e-127  Click
18 complement(88998..89885)  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SBO_P107; phage(gi157166067)  5e-168  Click
19 complement(89885..90211)  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SBO_P108; phage(gi157166066)  7e-58  Click
20 90287..90913  PHAGE_Entero_Sf6: putative transposase OrfB; SBO_P109; phage(gi41057343)  2e-125  Click
21 91079..91426  hypothetical protein; SBO_P110  N/A  Click
22 91598..91816  plasmid maintenance protein CcdA; SBO_P111  N/A  Click
23 91818..92123  plasmid maintenance protein CcdB; SBO_P112  N/A  Click
24 92516..94153  PHAGE_Gifsy_1: leucine-rich repeat protein; SBO_P113; phage(gi169257209)  3e-05  Click