Definition Shigella dysenteriae Sd197 plasmid pSD1_197, complete sequence.
Accession NC_007607
Length 182,726
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 28 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 21800..22099  PROPHAGE_Escher_MG1655: IS3 transposase A; SDY_P026; phage(gi226524700)  2e-39  Click
2 22096..22965  PROPHAGE_Escher_MG1655: IS3 transposase B; SDY_P027; phage(gi16128284)  4e-163  Click
3 23305..23577  PHAGE_Entero_P1: InsA; SDY_P028; phage(gi46401643)  2e-16  Click
4 23820..24908  PROPHAGE_Escher_CFT073: transposase; SDY_P029; phage(gi26248360)  2e-171  Click
5 24880..25521  PROPHAGE_Escher_CFT073: transposase/IS protein; SDY_P030; phage(gi26248359)  1e-101  Click
6 26268..27467  PHAGE_Entero_P1: ParA; SDY_P031; phage(gi46401682)  2e-176  Click
7 27467..28447  PHAGE_Entero_P1: ParB; SDY_P032; phage(gi46401681)  2e-99  Click
8 28703..29188  PROPHAGE_Shewan_MR-1: IS110 family transposase; SDY_P033; phage(gi24375433)  3e-24  Click
9 complement(29477..30604)  PHAGE_Vibrio_VHML: ORF37; SDY_P034; phage(gi27311204)  7e-07  Click
10 complement(31384..32007)  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SDY_P035; phage(gi157166067)  6e-115  Click
11 32204..32524  hypothetical protein; SDY_P036  N/A  Click
12 complement(32657..34381)  PHAGE_Melano_entomopoxvirus: ORF MSV257 leucine rich repeat gene family protein, similar to Amsacta moorei entomopoxvirus Q3 ORF SW:P28854; SDY_P037; phage(gi9631420)  7e-07  Click
13 complement(34809..36506)  PHAGE_Acanth_mimivirus: putative leucine-rich repeat protein; SDY_P038; phage(gi311977765)  2e-09  Click
14 complement(37326..37700)  PROPHAGE_Escher_CFT073: transposase insF; SDY_P039; phage(gi26249410)  8e-68  Click
15 complement(37678..38133)  PROPHAGE_Escher_CFT073: transposase insF; SDY_P040; phage(gi26249410)  6e-47  Click
16 complement(38236..38613)  PHAGE_Entero_P1: InsB; SDY_P041; phage(gi46401642)  4e-69  Click
17 39246..39695  PROPHAGE_Brucel_1330: ISBm1, transposase orfA; SDY_P042; phage(gi23501424)  2e-15  Click
18 39701..40090  PROPHAGE_Shewan_MR-1: ISSod6, transposase; SDY_P043; phage(gi24374783)  2e-15  Click
19 40229..40396  PHAGE_Haemop_SuMu: IS1414 transposase; SDY_P044; phage(gi418489079)  2e-12  Click
20 complement(40414..42162)  PHAGE_Acanth_mimivirus: putative leucine-rich repeat protein; SDY_P045; phage(gi311977765)  1e-06  Click
21 complement(42529..42795)  OspE1; SDY_P046  N/A  Click
22 complement(42851..43135)  IS1 ORF, fragment; SDY_P047  N/A  Click
23 43633..43935  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_P048; phage(gi21231087)  2e-09  Click
24 complement(44084..44479)  PHAGE_Entero_P1: InsB; SDY_P049; phage(gi46401642)  1e-27  Click
25 complement(44506..44778)  PHAGE_Entero_P1: InsA; SDY_P050; phage(gi46401643)  7e-19  Click
26 complement(44973..45620)  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SDY_P051; phage(gi157166067)  1e-117  Click
27 45781..46101  hypothetical protein; SDY_P052  N/A  Click
28 complement(46208..46537)  PROPHAGE_Shewan_MR-1: IS110 family transposase; SDY_P053; phage(gi24375433)  5e-07  Click
Region 2, total : 32 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(62292..62741)  PROPHAGE_Brucel_1330: ISBm1, transposase orfA; SDY_P072; phage(gi23501424)  2e-15  Click
2 complement(62787..63161)  hypothetical protein; SDY_P073  N/A  Click
3 complement(63347..63742)  plasmid stable inheritance protein; SDY_P074  N/A  Click
4 complement(63742..64701)  plasmid stable inheritance protein; SDY_P075  N/A  Click
5 65116..65511  hypothetical protein; SDY_P076  N/A  Click
6 complement(65508..66221)  PROPHAGE_Escher_CFT073: transposase insF; SDY_P077; phage(gi26249410)  2e-135  Click
7 complement(66288..66665)  PHAGE_Entero_P1: InsB; SDY_P078; phage(gi46401642)  4e-69  Click
8 complement(67139..67441)  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_P079; phage(gi21231087)  2e-09  Click
9 complement(67698..67853)  PROPHAGE_Escher_CFT073: transposase insD; SDY_P080; phage(gi26251005)  7e-16  Click
10 complement(68076..68294)  PROPHAGE_Escher_CFT073: transposase insC; SDY_P081; phage(gi26250372)  1e-10  Click
11 complement(68349..68987)  hypothetical protein; SDY_P082  N/A  Click
12 complement(69343..69615)  PHAGE_Entero_P1: InsA; SDY_P083; phage(gi46401643)  5e-17  Click
13 69951..70184  PROPHAGE_Escher_CFT073: transposase/IS protein; SDY_P084; phage(gi26248359)  4e-29  Click
14 complement(70236..70526)  hypothetical protein; SDY_P085  N/A  Click
15 complement(70533..70745)  hypothetical protein; SDY_P086  N/A  Click
16 71197..71481  hypothetical protein; SDY_P087  N/A  Click
17 71481..71756  hypothetical protein; SDY_P088  N/A  Click
18 71809..71982  hypothetical protein; SDY_P089  N/A  Click
19 complement(72117..72482)  plasmid stable inheritance protein; SDY_P090  N/A  Click
20 complement(72514..73011)  putative plasmid stable inheritance protein; SDY_P092  N/A  Click
21 73010..73771  PHAGE_Stx2_c_1717: transposase; SDY_P091; phage(gi209447153)  4e-26  Click
22 73771..74151  PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; SDY_P093; phage(gi26990787)  1e-21  Click
23 complement(74527..74742)  PHAGE_Entero_P1: InsB; SDY_P094; phage(gi46401642)  4e-11  Click
24 complement(74948..75220)  PHAGE_Entero_P1: InsA; SDY_P095; phage(gi46401643)  7e-19  Click
25 75460..75678  plasmid maintenance protein CcdA; SDY_P096  N/A  Click
26 75680..75985  plasmid maintenance protein CcdB; SDY_P097  N/A  Click
27 76543..76938  PHAGE_Entero_P1: InsB; SDY_P098; phage(gi46401642)  8e-28  Click
28 77122..78789  PHAGE_Ostreo_OlV1: hypothetical protein; SDY_P099; phage(gi313843974)  1e-06  Click
29 78997..79266  hypothetical protein; SDY_P100  N/A  Click
30 79518..80108  PHAGE_Entero_cdtI: hypothetical protein PcdtI_gp23; SDY_P101; phage(gi148609405)  7e-08  Click
31 80513..80755  putative IS orf; SDY_P102  N/A  Click
32 80794..82140  PROPHAGE_Escher_MG1655: IS4 transposase; SDY_P103; phage(gi16132099)  0.0  Click
Region 3, total : 15 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 163622..164269  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SDY_P203; phage(gi157166067)  4e-119  Click
2 complement(164747..165148)  IS91 orf; SDY_P204  N/A  Click
3 complement(165211..165468)  putative IS91 ORF2; SDY_P205  N/A  Click
4 complement(166459..166659)  putative reverse transcriptase, fragment; SDY_P206  N/A  Click
5 complement(166574..166816)  PROPHAGE_Escher_MG1655: IS3 transposase B; SDY_P207; phage(gi16128284)  7e-27  Click
6 complement(166789..167112)  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SDY_P208; phage(gi157166067)  2e-15  Click
7 complement(166995..167351)  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SDY_P210; phage(gi157166067)  2e-36  Click
8 167342..167593  hypothetical protein; SDY_P209  N/A  Click
9 complement(167852..169054)  VirA; SDY_P211  N/A  Click
10 complement(169389..169784)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_P212; phage(gi16131317)  9e-29  Click
11 complement(169811..170083)  PHAGE_Entero_P1: InsA; SDY_P213; phage(gi46401643)  7e-19  Click
12 170357..173665  PHAGE_Vibrio_VP5: major tail subunit; SDY_P214; phage(gi48696686)  3e-14  Click
13 complement(173891..174796)  PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SDY_P215; phage(gi16130763)  6e-179  Click
14 complement(174754..175119)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SDY_P216; phage(gi17546153)  1e-45  Click
15 175253..175876  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SDY_P217; phage(gi157166067)  5e-108  Click