Definition Shigella dysenteriae Sd197, complete genome.
Accession NC_007606
Length 4,369,232
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 17 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 8230..9183  PHAGE_Cyanop_MED4_213: TalC; SDY_0008; phage(gi472340344)  2e-12  Click
2 9298..9885  molybdenum cofactor biosynthesis protein MogA; SDY_0009  N/A  Click
3 complement(9920..10486)  hypothetical protein; SDY_0010  N/A  Click
4 complement(10635..11348)  hypothetical protein; SDY_0011  N/A  Click
5 complement(11374..11733)  hypothetical protein; SDY_0012  N/A  Click
6 12155..14071  PHAGE_Bathyc_BpV1: hypothetical protein; SDY_0013; phage(gi313768007)  2e-154  Click
7 14160..15290  PHAGE_Cafete_BV_PW1: putative DnaJ/Hsp40; SDY_0014; phage(gi310831116)  7e-47  Click
8 complement(15394..15603)  PHAGE_Stx2_c_II: putative host killer protein; SDY_0015; phage(gi302393105)  2e-21  Click
9 complement(15865..16080)  PHAGE_Entero_P1: InsB; SDY_0016; phage(gi46401642)  4e-11  Click
10 complement(16077..16259)  PHAGE_Entero_P1: InsB; SDY_0017; phage(gi46401642)  7e-05  Click
11 16905..18071  PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; SDY_0018; phage(gi163932195)  1e-04  Click
12 18131..19036  transcriptional activator NhaR; SDY_0019  N/A  Click
13 complement(19074..19601)  hypothetical protein; SDY_0020  N/A  Click
14 complement(19592..19816)  hypothetical protein; SDY_0021  N/A  Click
15 20011..20406  PHAGE_Entero_P1: InsB; SDY_0022; phage(gi46401642)  2e-28  Click
16 complement(20512..20889)  PHAGE_Entero_P1: InsB; SDY_0023; phage(gi46401642)  2e-69  Click
17 complement(20934..21209)  PHAGE_Entero_P1: InsA; SDY_0024; phage(gi46401643)  3e-48  Click
Region 2, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 250818..251567  PHAGE_Bacill_36: baseplate hub protein; SDY_0253; phage(gi156564128)  1e-07  Click
2 251743..252081  hypothetical protein; SDY_0254  N/A  Click
3 252416..252811  PHAGE_Entero_P1: InsB; SDY_0255; phage(gi46401642)  1e-28  Click
4 253042..253407  putative chaperone; SDY_0256  N/A  Click
5 253441..253716  PHAGE_Entero_P1: InsA; SDY_0257; phage(gi46401643)  3e-48  Click
6 253761..254138  PHAGE_Entero_P1: InsB; SDY_0258; phage(gi46401642)  4e-70  Click
7 254305..254381  tRNA  N/A  Click
8 complement(254653..255048)  PHAGE_Entero_P1: InsB; SDY_0260; phage(gi46401642)  1e-28  Click
9 256001..256396  PHAGE_Entero_P1: InsB; SDY_0261; phage(gi46401642)  1e-28  Click
Region 3, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(407525..411472)  PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; SDY_0423; phage(gi414087138)  1e-39  Click
2 complement(411486..412979)  PHAGE_Equid_8: envelope glycoprotein J; SDY_0424; phage(gi386522795)  5e-17  Click
3 complement(412889..415765)  PHAGE_Synech_S_CBS4: tail fiber protein; SDY_0425; phage(gi374531790)  1e-16  Click
4 complement(415836..416036)  hypothetical protein; SDY_0426  N/A  Click
5 416231..416626  PHAGE_Entero_P1: InsB; SDY_0427; phage(gi46401642)  2e-28  Click
6 complement(416643..416936)  hypothetical protein; SDY_0428  N/A  Click
7 complement(416946..417566)  hypothetical protein; SDY_0429  N/A  Click
8 417654..417929  PHAGE_Entero_P1: InsA; SDY_0430; phage(gi46401643)  3e-48  Click
9 417974..418351  PHAGE_Entero_P1: InsB; SDY_0431; phage(gi46401642)  4e-70  Click
10 complement(418512..419804)  PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; SDY_0432; phage(gi163932195)  9e-10  Click
11 421002..423506  PHAGE_Parame_AR158: hypothetical protein AR158_C785L; SDY_0434; phage(gi157953975)  2e-18  Click
Region 4, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(545011..547593)  PHAGE_Cafete_BV_PW1: putative isoleucyl-tRNA synthetase; SDY_0564; phage(gi310831495)  2e-06  Click
2 547792..548094  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SDY_0565; phage(gi24373865)  1e-09  Click
3 548121..548960  PHAGE_Entero_Sf6: putative transposase OrfB; SDY_0566; phage(gi41057343)  3e-168  Click
4 549081..549563  hypothetical protein; SDY_0567  N/A  Click
5 complement(549633..550616)  PHAGE_Megavi_chiliensis: putative Sel1-like repeat-containing protein; SDY_0568; phage(gi363540607)  1e-27  Click
6 complement(550845..551222)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0569; phage(gi16131317)  7e-69  Click
7 complement(551267..551542)  PHAGE_Entero_P1: InsA; SDY_0570; phage(gi46401643)  3e-48  Click
8 complement(551571..551807)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0571; phage(gi16131317)  4e-11  Click
9 complement(551804..551986)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0572; phage(gi16131317)  5e-05  Click
10 complement(552537..552610)  tRNA  N/A  Click
11 complement(552614..552689)  tRNA  N/A  Click
12 complement(552692..552768)  tRNA  N/A  Click
13 complement(552770..552846)  tRNA  N/A  Click
14 complement(553055..553612)  PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; SDY_0577; phage(gi169257243)  2e-45  Click
15 complement(553885..554439)  hypothetical protein; SDY_0578  N/A  Click
16 complement(554436..554726)  PHAGE_Erwini_phiEt88: hypothetical protein; SDY_0579; phage(gi327198620)  8e-33  Click
17 complement(554933..555538)  PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; SDY_0580; phage(gi169257248)  1e-45  Click
18 complement(555577..555864)  hypothetical protein; SDY_0581  N/A  Click
19 complement(555930..556175)  hypothetical protein; SDY_0582  N/A  Click
20 complement(556081..556305)  PROPHAGE_Escher_CFT073: transposase insF; SDY_0583; phage(gi26249410)  1e-38  Click
21 complement(556386..556913)  PROPHAGE_Escher_CFT073: transposase insF; SDY_0584; phage(gi26249410)  5e-92  Click
22 complement(556949..557251)  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_0585; phage(gi21231087)  7e-10  Click
23 557290..557649  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SDY_0586; phage(gi24373865)  1e-09  Click
24 557676..558515  PHAGE_Entero_Sf6: putative transposase OrfB; SDY_0587; phage(gi41057343)  7e-169  Click
25 complement(558682..559356)  glutamate/aspartate transport system permease; SDY_0588  N/A  Click
26 560013..560315  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_0590; phage(gi21231087)  2e-09  Click
27 560456..561268  PROPHAGE_Escher_CFT073: transposase insF; SDY_0591; phage(gi26249410)  9e-134  Click
Region 5, total : 28 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 669113..670171  PHAGE_Plankt_PaV_LD: ABC transporter; SDY_0712; phage(gi371496158)  8e-22  Click
2 complement(671726..672439)  PROPHAGE_Escher_CFT073: transposase insF; SDY_0714; phage(gi26249410)  3e-135  Click
3 complement(672580..672882)  PHAGE_Entero_Sf6: gene 56 protein; SDY_0715; phage(gi41057344)  1e-08  Click
4 complement(672953..673348)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0716; phage(gi16131317)  9e-29  Click
5 673543..673767  hypothetical protein; SDY_0717  N/A  Click
6 complement(673946..674467)  PHAGE_Entero_Sf6: putative transposase OrfB; SDY_0718; phage(gi41057343)  2e-102  Click
7 complement(674436..674786)  PHAGE_Entero_Sf6: putative transposase OrfB; SDY_0719; phage(gi41057343)  6e-58  Click
8 complement(674813..675115)  PHAGE_Entero_Sf6: gene 56 protein; SDY_0720; phage(gi41057344)  2e-49  Click
9 complement(675172..675696)  PHAGE_Entero_Sf6: putative transposase OrfB; SDY_0721; phage(gi41057343)  5e-100  Click
10 complement(675741..676100)  PHAGE_Entero_Sf6: gene 56 protein; SDY_0722; phage(gi41057344)  2e-49  Click
11 676139..676441  PHAGE_Entero_Sf6: gene 56 protein; SDY_0723; phage(gi41057344)  1e-09  Click
12 676582..677478  PROPHAGE_Escher_CFT073: transposase insF; SDY_0724; phage(gi26249410)  1e-134  Click
13 678909..679673  PHAGE_Escher_TL_2011c: putative terminase small subunit; SDY_0725; phage(gi418487072)  2e-16  Click
14 679597..680415  PHAGE_Psychr_pOW20_A: phage terminase large subunit; SDY_0726; phage(gi472339822)  1e-101  Click
15 complement(680338..681171)  PROPHAGE_Escher_CFT073: transposase insF; SDY_0727; phage(gi26249410)  1e-134  Click
16 complement(681312..681614)  PHAGE_Entero_Sf6: gene 56 protein; SDY_0728; phage(gi41057344)  1e-08  Click
17 complement(681711..682616)  PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SDY_0729; phage(gi16130763)  1e-177  Click
18 complement(682574..682939)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SDY_0730; phage(gi17546153)  1e-45  Click
19 683003..683404  PHAGE_Psychr_pOW20_A: phage terminase large subunit; SDY_0731; phage(gi472339822)  2e-26  Click
20 683332..683625  PHAGE_Vibrio_vB_VchM_138: putative TerL large-subunit terminase; SDY_0732; phage(gi422936562)  3e-20  Click
21 683625..683945  hypothetical protein; SDY_0733  N/A  Click
22 683996..684271  PHAGE_Entero_P1: InsA; SDY_0734; phage(gi46401643)  3e-48  Click
23 684316..684693  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0735; phage(gi16131317)  2e-69  Click
24 complement(684954..686081)  PHAGE_Acanth_mimivirus: putative RNA methyltransferase; SDY_0736; phage(gi311977789)  2e-09  Click
25 complement(686122..686610)  hypothetical protein; SDY_0737  N/A  Click
26 complement(686671..687516)  putrescine transporter subunit: membrane component of ABC superfamily; SDY_0738  N/A  Click
27 complement(687513..688466)  putrescine transporter subunit: membrane component of ABC superfamily; SDY_0739  N/A  Click
28 complement(688476..689609)  PHAGE_Plankt_PaV_LD: ABC transporter; SDY_0740; phage(gi371496158)  2e-20  Click
Region 6, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 710477..712909  PHAGE_Klebsi_KP15: Vs.6; SDY_0764; phage(gi294661496)  4e-11  Click
2 713055..713711  hypothetical protein; SDY_0765  N/A  Click
3 complement(713708..714103)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0766; phage(gi16131317)  7e-29  Click
4 complement(714683..715228)  putative regulatory protein; SDY_0767  N/A  Click
5 715646..716053  PROPHAGE_Escher_Sakai: phage transposase; SDY_0768; phage(gi15834199)  5e-30  Click
6 complement(716050..716763)  PROPHAGE_Escher_CFT073: transposase insF; SDY_0769; phage(gi26249410)  6e-136  Click
7 complement(716904..717206)  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_0770; phage(gi21231087)  1e-09  Click
8 717245..717574  PHAGE_Entero_phiP27: putative tail fiber assembly protein; SDY_0771; phage(gi18249919)  3e-15  Click
9 717561..718613  PHAGE_Entero_phiP27: putative tail fiber protein; SDY_0772; phage(gi18249920)  7e-55  Click
10 718914..719540  PHAGE_Entero_phiP27: hypothetical protein P27p57; SDY_0773; phage(gi18249921)  3e-72  Click
11 719801..720517  PHAGE_Escher_D108: DNA modification protein Mom; SDY_0774; phage(gi281199700)  1e-130  Click
12 720885..722144  hypothetical protein; SDY_0775  N/A  Click
13 complement(722385..723977)  PHAGE_Parame_AR158: hypothetical protein AR158_C788L; SDY_0776; phage(gi157953978)  3e-33  Click
Region 7, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(999324..1000109)  PROPHAGE_Escher_CFT073: transposase insF; SDY_1063; phage(gi26249410)  8e-134  Click
2 complement(1000250..1000552)  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1064; phage(gi21231087)  1e-09  Click
3 complement(1001080..1002129)  PHAGE_Entero_phiP27: putative tail fiber protein; SDY_1065; phage(gi18249920)  3e-85  Click
4 complement(1002153..1002641)  PHAGE_Entero_phiP27: putative tail fiber assembly protein; SDY_1066; phage(gi18249919)  4e-62  Click
5 complement(1002701..1002814)  putative phage tail fiber protein; SDY_1067  N/A  Click
6 1002853..1003155  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1068; phage(gi21231087)  2e-09  Click
7 1003296..1004009  PROPHAGE_Escher_CFT073: transposase insF; SDY_1069; phage(gi26249410)  5e-134  Click
8 complement(1004265..1004660)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1070; phage(gi16131317)  7e-29  Click
Region 8, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1008318..1008851  PHAGE_Provid_Redjac: phage structural protein; SDY_1077; phage(gi410490801)  2e-05  Click
2 complement(1008822..1009727)  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SDY_1078; phage(gi24111655)  4e-179  Click
3 complement(1009685..1010050)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SDY_1079; phage(gi17546153)  1e-45  Click
4 complement(1010435..1011220)  PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; SDY_1080; phage(gi428782753)  1e-24  Click
5 complement(1011244..1011639)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1081; phage(gi16131317)  7e-29  Click
6 1011834..1012043  hypothetical protein; SDY_1082  N/A  Click
7 complement(1012083..1012478)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1083; phage(gi16131317)  9e-29  Click
8 complement(1012902..1013573)  PHAGE_Pseudo_F116: hypothetical protein F116p67; SDY_1084; phage(gi56692976)  1e-43  Click
Region 9, total : 14 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1107028..1107867)  PHAGE_Entero_Sf6: putative transposase OrfB; SDY_1195; phage(gi41057343)  1e-167  Click
2 complement(1107894..1108220)  PHAGE_Entero_Sf6: gene 56 protein; SDY_1196; phage(gi41057344)  2e-49  Click
3 complement(1108193..1108963)  PROPHAGE_Escher_CFT073: transposase insF; SDY_1197; phage(gi26249410)  2e-135  Click
4 complement(1109104..1109406)  PHAGE_Entero_Sf6: gene 56 protein; SDY_1198; phage(gi41057344)  2e-09  Click
5 1109483..1109758  PHAGE_Entero_P1: InsA; SDY_1199; phage(gi46401643)  3e-48  Click
6 1109803..1110180  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1200; phage(gi16131317)  2e-69  Click
7 1111027..1111422  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1201; phage(gi16131317)  5e-28  Click
8 1111815..1112834  PHAGE_Prochl_P_SSM2: phage tail fiber-like protein; SDY_1202; phage(gi61806166)  4e-05  Click
9 complement(1112809..1113204)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1203; phage(gi16131317)  7e-29  Click
10 1113426..1116020  PHAGE_Megavi_lba: hypothetical protein; SDY_1204; phage(gi448825769)  8e-11  Click
11 complement(1116391..1116657)  cell division topological specificity factor MinE; SDY_1205  N/A  Click
12 complement(1116661..1117473)  PHAGE_Natria_PhiCh1: putative plasmid partitioning protein Soj; SDY_1206; phage(gi22091150)  4e-06  Click
13 complement(1117497..1118192)  septum formation inhibitor; SDY_1207  N/A  Click
14 complement(1118832..1119227)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1208; phage(gi16131317)  9e-29  Click
Region 10, total : 12 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1236040..1236315  PHAGE_Entero_P1: InsA; SDY_1336; phage(gi46401643)  3e-48  Click
2 1236360..1236737  PHAGE_Entero_P1: InsB; SDY_1337; phage(gi46401642)  4e-70  Click
3 1236766..1237191  hypothetical protein; SDY_1338  N/A  Click
4 1237404..1238276  23S rRNA pseudouridylate synthase B; SDY_1339  N/A  Click
5 complement(1238316..1238906)  PHAGE_Cyanop_PSS2: BtuR/CobO ATP:corrinoid adenosyltransferase; SDY_1340; phage(gi254729498)  2e-15  Click
6 complement(1238903..1239661)  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; SDY_1341; phage(gi116326757)  5e-11  Click
7 1239881..1240921  PHAGE_Entero_WV8: putative head maturation protease; SDY_1342; phage(gi238801794)  4e-13  Click
8 complement(1240957..1241208)  hypothetical protein; SDY_1343  N/A  Click
9 1241588..1244185  PHAGE_Cafete_BV_PW1: putative DNA topoisomerase IA; SDY_1344; phage(gi310831073)  1e-89  Click
10 1244395..1245369  transcriptional regulator CysB; SDY_1345  N/A  Click
11 complement(1245629..1246006)  PHAGE_Entero_P1: InsB; SDY_1346; phage(gi46401642)  4e-70  Click
12 complement(1246051..1246326)  PHAGE_Entero_P1: InsA; SDY_1347; phage(gi46401643)  3e-48  Click
Region 11, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1274438..1275244)  PHAGE_Plankt_PaV_LD: ABC transporter; SDY_1377; phage(gi371496158)  9e-17  Click
2 complement(1275246..1276238)  PHAGE_Plankt_PaV_LD: ABC transporter; SDY_1378; phage(gi371496158)  6e-10  Click
3 complement(1276238..1277128)  SapC; SDY_1379  N/A  Click
4 1276904..1276916  attL    AGAAACTTCGCCA  N/A  Click
5 1277263..1278492  PHAGE_Entero_mEpX1: integrase; SDY_1380; phage(gi428781899)  3e-120  Click
6 1278706..1278981  PHAGE_Entero_P1: InsA; SDY_1381; phage(gi46401643)  3e-48  Click
7 complement(1279827..1280507)  PHAGE_Stx1_converting: exonuclease; SDY_1382; phage(gi302861167)  8e-130  Click
8 complement(1280504..1281289)  PHAGE_Stx1_converting: recombination protein Bet; SDY_1383; phage(gi302861168)  1e-142  Click
9 complement(1281295..1281591)  PHAGE_Stx2_c_86: host-nuclease inhibitor protein Gam; SDY_1384; phage(gi116222045)  5e-45  Click
10 complement(1281588..1282082)  hypothetical protein; SDY_1385  N/A  Click
11 1282475..1282777  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1386; phage(gi21231087)  2e-09  Click
12 1282813..1283229  PROPHAGE_Escher_CFT073: transposase insF; SDY_1387; phage(gi26249410)  8e-74  Click
13 1283258..1283692  PROPHAGE_Escher_CFT073: transposase insF; SDY_1388; phage(gi26249410)  2e-68  Click
14 1283865..1284812  PHAGE_Stx1_converting: Shiga toxin 1 subunit A; SDY_1389; phage(gi302861195)  1e-176  Click
15 1284822..1285091  PHAGE_Stx1_converting: Shiga toxin 1 subunit B; SDY_1390; phage(gi302861196)  4e-46  Click
16 1285601..1287511  PHAGE_Escher_P13374: hypothetical protein; SDY_1391; phage(gi410491642)  0.0  Click
17 1287698..1288105  PHAGE_Stx1_converting: hypothetical protein Stx1_gp76; SDY_1392; phage(gi302861198)  2e-51  Click
18 1287942..1287954  attR    AGAAACTTCGCCA  N/A  Click
19 1288182..1288397  PHAGE_Stx1_converting: holin; SDY_1393; phage(gi302861199)  6e-34  Click
20 1288402..1288935  PHAGE_Stx1_converting: endolysin; SDY_1394; phage(gi302861200)  8e-93  Click
21 complement(1289159..1289998)  PHAGE_Entero_Sf6: putative transposase OrfB; SDY_1395; phage(gi41057343)  8e-170  Click
22 1290194..1290469  PHAGE_Entero_P1: InsA; SDY_1396; phage(gi46401643)  3e-48  Click
23 1290514..1290891  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1397; phage(gi16131317)  2e-69  Click
Region 12, total : 29 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1316535..1317470)  PHAGE_Parame_FR483: hypothetical protein FR483_N404R; SDY_1426; phage(gi155370502)  2e-08  Click
2 1317430..1317446  attL    TTGTATTGTTCTTTCTT  N/A  Click
3 complement(1317522..1317761)  PHAGE_Entero_phiP27: putative integrase; SDY_1427; phage(gi18249865)  1e-24  Click
4 complement(1317789..1318502)  PROPHAGE_Escher_CFT073: transposase insF; SDY_1428; phage(gi26249410)  9e-137  Click
5 complement(1318580..1318978)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1429; phage(gi16131317)  5e-45  Click
6 complement(1319000..1319275)  PHAGE_Entero_P1: InsA; SDY_1430; phage(gi46401643)  3e-48  Click
7 1320100..1320495  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1431; phage(gi16131317)  3e-28  Click
8 1321016..1321171  PHAGE_Stx2_c_II: putative host killer protein; SDY_1432; phage(gi302393105)  3e-19  Click
9 1321388..1321639  hypothetical protein; SDY_1433  N/A  Click
10 1321986..1323035  PHAGE_Entero_mEp460: hypothetical protein; SDY_1434; phage(gi428782365)  2e-109  Click
11 1323048..1323422  PHAGE_Escher_HK75: RusA-like protein; SDY_1435; phage(gi356870726)  6e-36  Click
12 1323419..1324240  PHAGE_Entero_HK225: late gene regulator Q; SDY_1436; phage(gi428782441)  6e-87  Click
13 1324384..1324459  tRNA  N/A  Click
14 1324558..1324634  tRNA  N/A  Click
15 1324726..1325001  PHAGE_Entero_P1: InsA; SDY_1439; phage(gi46401643)  3e-48  Click
16 1325046..1325423  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1440; phage(gi16131317)  1e-68  Click
17 complement(1325794..1326018)  hypothetical protein; SDY_1441  N/A  Click
18 1326213..1326608  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1442; phage(gi16131317)  9e-29  Click
19 1326609..1326815  hypothetical protein; SDY_1443  N/A  Click
20 1326985..1327287  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1444; phage(gi21231087)  1e-09  Click
21 1327428..1328141  PROPHAGE_Escher_CFT073: transposase insF; SDY_1445; phage(gi26249410)  2e-134  Click
22 complement(1328535..1328930)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1446; phage(gi16131317)  7e-29  Click
23 1329125..1329325  hypothetical protein; SDY_1447  N/A  Click
24 1329300..1329542  PHAGE_Entero_2008: hypothetical protein YYZ_gp42; SDY_1448; phage(gi209427766)  5e-32  Click
25 1329900..1330265  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SDY_1449; phage(gi17546153)  1e-45  Click
26 1330223..1331128  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SDY_1450; phage(gi24111655)  2e-178  Click
27 complement(1331593..1332306)  PROPHAGE_Escher_CFT073: transposase insF; SDY_1451; phage(gi26249410)  2e-134  Click
28 complement(1332447..1332749)  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1452; phage(gi21231087)  1e-09  Click
29 1333431..1333796  PHAGE_Entero_phiP27: hypothetical protein P27p57; SDY_1453; phage(gi18249921)  8e-54  Click
30 complement(1333997..1334854)  Iron transport protein, inner membrane component; SDY_1454  N/A  Click
31 complement(1334851..1335708)  iron transport protein, inner membrane component; SDY_1455  N/A  Click
32 complement(1335705..1336532)  PHAGE_Plankt_PaV_LD: ABC transporter; SDY_1456; phage(gi371496158)  5e-13  Click
33 1337817..1337833  attR    TTGTATTGTTCTTTCTT  N/A  Click
Region 13, total : 28 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1742738..1743484)  PHAGE_Plankt_PaV_LD: ABC transporter; SDY_1913; phage(gi371496158)  2e-09  Click
2 complement(1743494..1744261)  hypothetical protein; SDY_1914  N/A  Click
3 complement(1744550..1745287)  PHAGE_Escher_D108: DNA modification protein Mom; SDY_1915; phage(gi281199700)  9e-140  Click
4 complement(1745479..1746072)  PHAGE_Escher_D108: G region invertase; SDY_1916; phage(gi281199698)  2e-109  Click
5 1746264..1746758  PHAGE_Entero_Mu: tail fiber fragment; SDY_1917; phage(gi19584574)  7e-88  Click
6 complement(1746783..1747631)  PROPHAGE_Escher_CFT073: transposase insF; SDY_1918; phage(gi26249410)  2e-158  Click
7 complement(1749620..1750015)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1919; phage(gi16131317)  7e-29  Click
8 1750428..1750730  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1920; phage(gi21231087)  4e-09  Click
9 1750871..1751584  PROPHAGE_Escher_CFT073: transposase insF; SDY_1921; phage(gi26249410)  6e-135  Click
10 complement(1751625..1752287)  PHAGE_Escher_TL_2011c: helicase domain protein; SDY_1922; phage(gi418487063)  3e-124  Click
11 complement(1752281..1752652)  PHAGE_Escher_TL_2011c: hypothetical protein; SDY_1923; phage(gi418487092)  2e-13  Click
12 complement(1753199..1753402)  PHAGE_Escher_TL_2011c: hypothetical protein; SDY_1924; phage(gi418487091)  2e-32  Click
13 1753498..1754211  PHAGE_Escher_TL_2011c: repressor protein CI; SDY_1925; phage(gi418487062)  9e-134  Click
14 1754305..1755774  PHAGE_Escher_TL_2011c: modification methylase BsuBI; SDY_1926; phage(gi418487061)  0.0  Click
15 1755771..1756724  PHAGE_Escher_TL_2011c: type II restriction enzyme BsuBI; SDY_1927; phage(gi418487060)  0.0  Click
16 1757618..1758034  PHAGE_Escher_TL_2011c: phage regulatory protein, Rha family; SDY_1928; phage(gi418487059)  2e-66  Click
17 1758031..1758264  PHAGE_Escher_TL_2011c: hypothetical protein; SDY_1929; phage(gi418487090)  5e-38  Click
18 complement(1758417..1758938)  PHAGE_Entero_Sf6: putative transposase OrfB; SDY_1930; phage(gi41057343)  4e-103  Click
19 complement(1758907..1759257)  PHAGE_Entero_Sf6: putative transposase OrfB; SDY_1931; phage(gi41057343)  6e-58  Click
20 complement(1759284..1759586)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SDY_1932; phage(gi24373865)  1e-09  Click
21 1759633..1759800  PHAGE_Escher_TL_2011c: hypothetical protein; SDY_1933; phage(gi418487058)  9e-21  Click
22 1759856..1760131  PHAGE_Entero_P1: InsA; SDY_1934; phage(gi46401643)  3e-48  Click
23 complement(1761846..1762160)  PHAGE_Ostreo_OlV1: hypothetical protein; SDY_1936; phage(gi313844185)  2e-07  Click
24 complement(1762235..1762456)  peripheral inner membrane phage-shock protein; SDY_1937  N/A  Click
25 complement(1762465..1762824)  DNA-binding transcriptional activator PspC; SDY_1938  N/A  Click
26 complement(1762824..1763048)  phage shock protein B; SDY_1939  N/A  Click
27 complement(1763102..1763770)  PHAGE_Bathyc_BpV1: hypothetical protein; SDY_1940; phage(gi313768111)  7e-06  Click
28 1763937..1764914  phage shock protein operon transcriptional activator; SDY_1941  N/A  Click
Region 14, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1807900..1808691)  PROPHAGE_Escher_CFT073: transposase insF; SDY_1990; phage(gi26249410)  6e-130  Click
2 1808751..1809053  PHAGE_Entero_Sf6: gene 56 protein; SDY_1991; phage(gi41057344)  2e-49  Click
3 1809080..1809919  PHAGE_Entero_Sf6: putative transposase OrfB; SDY_1992; phage(gi41057343)  8e-170  Click
4 complement(1809934..1810203)  hypothetical protein; SDY_1993  N/A  Click
5 1810224..1810300  tRNA  N/A  Click
6 1810302..1810378  tRNA  N/A  Click
7 1810381..1810456  tRNA  N/A  Click
8 1810460..1810534  tRNA  N/A  Click
9 1810827..1811042  PHAGE_Escher_P13374: lysis protein, holin; SDY_1998; phage(gi410491645)  3e-27  Click
10 1811227..1811529  PHAGE_Entero_Sf6: gene 56 protein; SDY_1999; phage(gi41057344)  4e-08  Click
11 1811670..1812200  PROPHAGE_Escher_CFT073: transposase insF; SDY_2000; phage(gi26249410)  2e-99  Click
12 complement(1812689..1814404)  PHAGE_Ostreo_OlV1: hypothetical protein; SDY_2001; phage(gi313843974)  1e-07  Click
13 1815161..1815556  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2002; phage(gi16131317)  7e-29  Click
14 1816133..1817884  PHAGE_Gifsy_1: leucine-rich repeat protein; SDY_2003; phage(gi169257209)  2e-08  Click
15 complement(1818373..1818903)  PROPHAGE_Escher_CFT073: transposase insF; SDY_2004; phage(gi26249410)  2e-99  Click
16 complement(1819095..1819346)  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_2005; phage(gi21231087)  4e-05  Click
17 complement(1819408..1819680)  PHAGE_Entero_phiP27: hypothetical protein P27p57; SDY_2006; phage(gi18249921)  5e-35  Click
18 complement(1819681..1820076)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2007; phage(gi16131317)  1e-27  Click
19 1820489..1820791  PHAGE_Entero_Sf6: gene 56 protein; SDY_2008; phage(gi41057344)  3e-09  Click
20 1820932..1821462  PROPHAGE_Escher_CFT073: transposase insF; SDY_2009; phage(gi26249410)  5e-98  Click
21 1821551..1821796  hypothetical protein; SDY_2010  N/A  Click
22 1821904..1822899  6-phosphogluconolactonase; SDY_2011  N/A  Click
23 complement(1822940..1823392)  hypothetical protein; SDY_2012  N/A  Click
24 complement(1823444..1823839)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2013; phage(gi16131317)  5e-28  Click
Region 15, total : 9 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1918771..1919127  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2114; phage(gi16131317)  7e-18  Click
2 complement(1919220..1919627)  PHAGE_Pseudo_KPP12: putative structural protein; SDY_2115; phage(gi431811107)  3e-09  Click
3 complement(1919856..1920797)  PHAGE_Vibrio_CP_T1: putative major capsid protein; SDY_2116; phage(gi418489228)  9e-16  Click
4 complement(1920809..1921069)  putative bacteriophage protein; SDY_2117  N/A  Click
5 complement(1921070..1921315)  putative bacteriophage protein; SDY_2118  N/A  Click
6 complement(1921319..1922191)  PHAGE_Edward_MSW_3: putative head protein; SDY_2119; phage(gi448261038)  7e-07  Click
7 complement(1922269..1922532)  hypothetical protein; SDY_2120  N/A  Click
8 complement(1923170..1924252)  PHAGE_Edward_MSW_3: putative portal protein; SDY_2121; phage(gi448261029)  4e-27  Click
9 complement(1924345..1924722)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2122; phage(gi16131317)  2e-69  Click
Region 16, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2208003..2208731  PHAGE_Plankt_PaV_LD: ABC transporter; SDY_2404; phage(gi371496158)  4e-31  Click
2 2208749..2209480  PHAGE_Cafete_BV_PW1: putative ABC-type amino acid transporter; SDY_2405; phage(gi310831221)  1e-06  Click
3 2209487..2210203  arginine transporter permease subunit ArtQ; SDY_2406  N/A  Click
4 2210203..2210871  arginine transporter permease subunit ArtM; SDY_2407  N/A  Click
5 2210907..2210934  attL    CTGATAAGACGCGCCAGCGTCGCATCAG  N/A  Click
6 complement(2211498..2211713)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2409; phage(gi16131317)  4e-11  Click
7 complement(2211710..2212519)  PROPHAGE_Escher_CFT073: transposase insF; SDY_2410; phage(gi26249410)  9e-134  Click
8 complement(2212660..2212962)  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_2411; phage(gi21231087)  1e-09  Click
9 complement(2213019..2213162)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2412; phage(gi16131317)  7e-08  Click
10 2213357..2213557  hypothetical protein; SDY_2413  N/A  Click
11 complement(2213696..2214424)  PHAGE_Escher_HK75: KilA; SDY_2414; phage(gi356870724)  2e-121  Click
12 complement(2214493..2215356)  PHAGE_Entero_Min27: hypothetical protein; SDY_2415; phage(gi170783645)  1e-106  Click
13 2215810..2216118  PHAGE_Entero_N15: gp48; SDY_2416; phage(gi9630515)  2e-07  Click
14 complement(2216333..2216743)  PHAGE_Escher_HK75: NinB; SDY_2417; phage(gi356870721)  1e-72  Click
15 complement(2216796..2217584)  PROPHAGE_Escher_CFT073: transposase insF; SDY_2418; phage(gi26249410)  3e-136  Click
16 complement(2217725..2218027)  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_2419; phage(gi21231087)  7e-10  Click
17 2218110..2219165  PHAGE_Entero_mEp235: integrase; SDY_2420; phage(gi428781836)  0.0  Click
18 complement(2219223..2219783)  hypothetical protein; SDY_2421  N/A  Click
19 complement(2219780..2220256)  hypothetical protein; SDY_2422  N/A  Click
20 complement(2220357..2222984)  PHAGE_Lactoc_949: putative DNA gyrase subunit A-topoisomerase; SDY_2423; phage(gi327197938)  9e-74  Click
21 2223131..2223853  PHAGE_Microm_12T: hypothetical protein; SDY_2424; phage(gi472342811)  7e-09  Click
22 complement(2223994..2226156)  PHAGE_Cafete_BV_PW1: hypothetical protein; SDY_2425; phage(gi310831349)  3e-08  Click
23 2230787..2230814  attR    CTGATAAGACGCGCCAGCGTCGCATCAG  N/A  Click
Region 17, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2554379..2554819)  PHAGE_Entero_2: DNA-invertase; SDY_2752; phage(gi169936026)  1e-74  Click
2 2555309..2557135  PHAGE_Acanth_mimivirus: putative leucine-rich repeat protein; SDY_2753; phage(gi311977765)  4e-09  Click
3 complement(2557295..2558008)  PROPHAGE_Escher_CFT073: transposase insF; SDY_2754; phage(gi26249410)  8e-135  Click
4 complement(2558149..2558451)  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_2755; phage(gi21231087)  1e-09  Click
5 2558467..2558766  PROPHAGE_Escher_CFT073: transposase insF; SDY_2756; phage(gi26249410)  5e-44  Click
6 complement(2558866..2559231)  PHAGE_Entero_phiP27: hypothetical protein P27p57; SDY_2757; phage(gi18249921)  5e-46  Click
7 complement(2559444..2560319)  PHAGE_Entero_phiP27: putative tail fiber protein; SDY_2758; phage(gi18249920)  4e-37  Click
8 complement(2560408..2560680)  PHAGE_Entero_phiP27: putative tail fiber protein; SDY_2759; phage(gi18249920)  6e-39  Click
9 complement(2560844..2561203)  hypothetical protein; SDY_2760  N/A  Click
10 2561398..2561793  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2761; phage(gi16131317)  7e-29  Click
11 complement(2561768..2562136)  hypothetical protein; SDY_2762  N/A  Click
12 2562219..2562494  PHAGE_Entero_P1: InsA; SDY_2763; phage(gi46401643)  1e-47  Click
13 2562539..2562916  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2764; phage(gi16131317)  1e-68  Click
Region 18, total : 10 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2567511..2568713)  PROPHAGE_Escher_MG1655: IS4 transposase; SDY_2769; phage(gi16132099)  0.0  Click
2 2569222..2569524  PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_2770; phage(gi21231087)  1e-09  Click
3 2569665..2570378  PROPHAGE_Escher_CFT073: transposase insF; SDY_2771; phage(gi26249410)  3e-135  Click
4 2570452..2571057  PHAGE_Aeromo_vB_AsaM_56: hypothetical protein; SDY_2772; phage(gi422937564)  8e-32  Click
5 2571250..2571927  PHAGE_Entero_P2: gpH; SDY_2773; phage(gi9630346)  7e-56  Click
6 2571971..2572381  PROPHAGE_Escher_CFT073: transposase insC; SDY_2774; phage(gi26249447)  3e-52  Click
7 2572405..2573133  PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SDY_2775; phage(gi16130763)  1e-137  Click
8 complement(2573130..2573525)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2776; phage(gi16131317)  7e-29  Click
9 2573720..2574028  hypothetical protein; SDY_2777  N/A  Click
10 2574436..2575233  PHAGE_Pseudo_MP1412: diguanylate-cyclase GGDEF domain; SDY_2778; phage(gi399529005)  9e-08  Click
Region 19, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2649524..2650858)  PHAGE_Strept_TG1: putative regulator, GntR family; SDY_2864; phage(gi410491962)  1e-05  Click
2 2650946..2651377  hypothetical protein; SDY_2865  N/A  Click
3 2651587..2651832  PHAGE_Mycoba_Porky: gp37; SDY_2866; phage(gi194303333)  6e-10  Click
4 2651829..2652239  PHAGE_Bacill_SP10: ribonucleotide reductase stimulatory protein; SDY_2867; phage(gi418489617)  9e-14  Click
5 2652251..2654101  PHAGE_Entero_phiEF24C: putative ribonucleotide reductase; SDY_2868; phage(gi158079505)  4e-176  Click
6 2654366..2655334  PHAGE_Mycoba_Myrna: gp256; SDY_2869; phage(gi203454817)  7e-126  Click
7 complement(2655328..2655705)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2870; phage(gi16131317)  2e-69  Click
8 complement(2655750..2656025)  PHAGE_Entero_P1: InsA; SDY_2871; phage(gi46401643)  3e-48  Click
9 2656201..2657226  PHAGE_Plankt_PaV_LD: ABC transporter; SDY_2872; phage(gi371496158)  1e-21  Click
10 2657219..2658283  PHAGE_Lactob_KC5a: putative minor tail protein; SDY_2873; phage(gi90592623)  5e-05  Click
11 complement(2658396..2658791)  PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2874; phage(gi16131317)  7e-29  Click