Definition | Shigella dysenteriae Sd197, complete genome. |
---|---|
Accession | NC_007606 |
Length | 4,369,232 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 17 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 8230..9183 | PHAGE_Cyanop_MED4_213: TalC; SDY_0008; phage(gi472340344) | 2e-12 | Click |
2 | 9298..9885 | molybdenum cofactor biosynthesis protein MogA; SDY_0009 | N/A | Click |
3 | complement(9920..10486) | hypothetical protein; SDY_0010 | N/A | Click |
4 | complement(10635..11348) | hypothetical protein; SDY_0011 | N/A | Click |
5 | complement(11374..11733) | hypothetical protein; SDY_0012 | N/A | Click |
6 | 12155..14071 | PHAGE_Bathyc_BpV1: hypothetical protein; SDY_0013; phage(gi313768007) | 2e-154 | Click |
7 | 14160..15290 | PHAGE_Cafete_BV_PW1: putative DnaJ/Hsp40; SDY_0014; phage(gi310831116) | 7e-47 | Click |
8 | complement(15394..15603) | PHAGE_Stx2_c_II: putative host killer protein; SDY_0015; phage(gi302393105) | 2e-21 | Click |
9 | complement(15865..16080) | PHAGE_Entero_P1: InsB; SDY_0016; phage(gi46401642) | 4e-11 | Click |
10 | complement(16077..16259) | PHAGE_Entero_P1: InsB; SDY_0017; phage(gi46401642) | 7e-05 | Click |
11 | 16905..18071 | PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; SDY_0018; phage(gi163932195) | 1e-04 | Click |
12 | 18131..19036 | transcriptional activator NhaR; SDY_0019 | N/A | Click |
13 | complement(19074..19601) | hypothetical protein; SDY_0020 | N/A | Click |
14 | complement(19592..19816) | hypothetical protein; SDY_0021 | N/A | Click |
15 | 20011..20406 | PHAGE_Entero_P1: InsB; SDY_0022; phage(gi46401642) | 2e-28 | Click |
16 | complement(20512..20889) | PHAGE_Entero_P1: InsB; SDY_0023; phage(gi46401642) | 2e-69 | Click |
17 | complement(20934..21209) | PHAGE_Entero_P1: InsA; SDY_0024; phage(gi46401643) | 3e-48 | Click |
Region 2, total : 8 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 250818..251567 | PHAGE_Bacill_36: baseplate hub protein; SDY_0253; phage(gi156564128) | 1e-07 | Click |
2 | 251743..252081 | hypothetical protein; SDY_0254 | N/A | Click |
3 | 252416..252811 | PHAGE_Entero_P1: InsB; SDY_0255; phage(gi46401642) | 1e-28 | Click |
4 | 253042..253407 | putative chaperone; SDY_0256 | N/A | Click |
5 | 253441..253716 | PHAGE_Entero_P1: InsA; SDY_0257; phage(gi46401643) | 3e-48 | Click |
6 | 253761..254138 | PHAGE_Entero_P1: InsB; SDY_0258; phage(gi46401642) | 4e-70 | Click |
7 | 254305..254381 | tRNA | N/A | Click |
8 | complement(254653..255048) | PHAGE_Entero_P1: InsB; SDY_0260; phage(gi46401642) | 1e-28 | Click |
9 | 256001..256396 | PHAGE_Entero_P1: InsB; SDY_0261; phage(gi46401642) | 1e-28 | Click |
Region 3, total : 11 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(407525..411472) | PHAGE_Cronob_vB_CsaM_GAP32: long tail fiber proximal subunit; SDY_0423; phage(gi414087138) | 1e-39 | Click |
2 | complement(411486..412979) | PHAGE_Equid_8: envelope glycoprotein J; SDY_0424; phage(gi386522795) | 5e-17 | Click |
3 | complement(412889..415765) | PHAGE_Synech_S_CBS4: tail fiber protein; SDY_0425; phage(gi374531790) | 1e-16 | Click |
4 | complement(415836..416036) | hypothetical protein; SDY_0426 | N/A | Click |
5 | 416231..416626 | PHAGE_Entero_P1: InsB; SDY_0427; phage(gi46401642) | 2e-28 | Click |
6 | complement(416643..416936) | hypothetical protein; SDY_0428 | N/A | Click |
7 | complement(416946..417566) | hypothetical protein; SDY_0429 | N/A | Click |
8 | 417654..417929 | PHAGE_Entero_P1: InsA; SDY_0430; phage(gi46401643) | 3e-48 | Click |
9 | 417974..418351 | PHAGE_Entero_P1: InsB; SDY_0431; phage(gi46401642) | 4e-70 | Click |
10 | complement(418512..419804) | PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; SDY_0432; phage(gi163932195) | 9e-10 | Click |
11 | 421002..423506 | PHAGE_Parame_AR158: hypothetical protein AR158_C785L; SDY_0434; phage(gi157953975) | 2e-18 | Click |
Region 4, total : 22 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(545011..547593) | PHAGE_Cafete_BV_PW1: putative isoleucyl-tRNA synthetase; SDY_0564; phage(gi310831495) | 2e-06 | Click |
2 | 547792..548094 | PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SDY_0565; phage(gi24373865) | 1e-09 | Click |
3 | 548121..548960 | PHAGE_Entero_Sf6: putative transposase OrfB; SDY_0566; phage(gi41057343) | 3e-168 | Click |
4 | 549081..549563 | hypothetical protein; SDY_0567 | N/A | Click |
5 | complement(549633..550616) | PHAGE_Megavi_chiliensis: putative Sel1-like repeat-containing protein; SDY_0568; phage(gi363540607) | 1e-27 | Click |
6 | complement(550845..551222) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0569; phage(gi16131317) | 7e-69 | Click |
7 | complement(551267..551542) | PHAGE_Entero_P1: InsA; SDY_0570; phage(gi46401643) | 3e-48 | Click |
8 | complement(551571..551807) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0571; phage(gi16131317) | 4e-11 | Click |
9 | complement(551804..551986) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0572; phage(gi16131317) | 5e-05 | Click |
10 | complement(552537..552610) | tRNA | N/A | Click |
11 | complement(552614..552689) | tRNA | N/A | Click |
12 | complement(552692..552768) | tRNA | N/A | Click |
13 | complement(552770..552846) | tRNA | N/A | Click |
14 | complement(553055..553612) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; SDY_0577; phage(gi169257243) | 2e-45 | Click |
15 | complement(553885..554439) | hypothetical protein; SDY_0578 | N/A | Click |
16 | complement(554436..554726) | PHAGE_Erwini_phiEt88: hypothetical protein; SDY_0579; phage(gi327198620) | 8e-33 | Click |
17 | complement(554933..555538) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; SDY_0580; phage(gi169257248) | 1e-45 | Click |
18 | complement(555577..555864) | hypothetical protein; SDY_0581 | N/A | Click |
19 | complement(555930..556175) | hypothetical protein; SDY_0582 | N/A | Click |
20 | complement(556081..556305) | PROPHAGE_Escher_CFT073: transposase insF; SDY_0583; phage(gi26249410) | 1e-38 | Click |
21 | complement(556386..556913) | PROPHAGE_Escher_CFT073: transposase insF; SDY_0584; phage(gi26249410) | 5e-92 | Click |
22 | complement(556949..557251) | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_0585; phage(gi21231087) | 7e-10 | Click |
23 | 557290..557649 | PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SDY_0586; phage(gi24373865) | 1e-09 | Click |
24 | 557676..558515 | PHAGE_Entero_Sf6: putative transposase OrfB; SDY_0587; phage(gi41057343) | 7e-169 | Click |
25 | complement(558682..559356) | glutamate/aspartate transport system permease; SDY_0588 | N/A | Click |
26 | 560013..560315 | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_0590; phage(gi21231087) | 2e-09 | Click |
27 | 560456..561268 | PROPHAGE_Escher_CFT073: transposase insF; SDY_0591; phage(gi26249410) | 9e-134 | Click |
Region 5, total : 28 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 669113..670171 | PHAGE_Plankt_PaV_LD: ABC transporter; SDY_0712; phage(gi371496158) | 8e-22 | Click |
2 | complement(671726..672439) | PROPHAGE_Escher_CFT073: transposase insF; SDY_0714; phage(gi26249410) | 3e-135 | Click |
3 | complement(672580..672882) | PHAGE_Entero_Sf6: gene 56 protein; SDY_0715; phage(gi41057344) | 1e-08 | Click |
4 | complement(672953..673348) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0716; phage(gi16131317) | 9e-29 | Click |
5 | 673543..673767 | hypothetical protein; SDY_0717 | N/A | Click |
6 | complement(673946..674467) | PHAGE_Entero_Sf6: putative transposase OrfB; SDY_0718; phage(gi41057343) | 2e-102 | Click |
7 | complement(674436..674786) | PHAGE_Entero_Sf6: putative transposase OrfB; SDY_0719; phage(gi41057343) | 6e-58 | Click |
8 | complement(674813..675115) | PHAGE_Entero_Sf6: gene 56 protein; SDY_0720; phage(gi41057344) | 2e-49 | Click |
9 | complement(675172..675696) | PHAGE_Entero_Sf6: putative transposase OrfB; SDY_0721; phage(gi41057343) | 5e-100 | Click |
10 | complement(675741..676100) | PHAGE_Entero_Sf6: gene 56 protein; SDY_0722; phage(gi41057344) | 2e-49 | Click |
11 | 676139..676441 | PHAGE_Entero_Sf6: gene 56 protein; SDY_0723; phage(gi41057344) | 1e-09 | Click |
12 | 676582..677478 | PROPHAGE_Escher_CFT073: transposase insF; SDY_0724; phage(gi26249410) | 1e-134 | Click |
13 | 678909..679673 | PHAGE_Escher_TL_2011c: putative terminase small subunit; SDY_0725; phage(gi418487072) | 2e-16 | Click |
14 | 679597..680415 | PHAGE_Psychr_pOW20_A: phage terminase large subunit; SDY_0726; phage(gi472339822) | 1e-101 | Click |
15 | complement(680338..681171) | PROPHAGE_Escher_CFT073: transposase insF; SDY_0727; phage(gi26249410) | 1e-134 | Click |
16 | complement(681312..681614) | PHAGE_Entero_Sf6: gene 56 protein; SDY_0728; phage(gi41057344) | 1e-08 | Click |
17 | complement(681711..682616) | PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SDY_0729; phage(gi16130763) | 1e-177 | Click |
18 | complement(682574..682939) | PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SDY_0730; phage(gi17546153) | 1e-45 | Click |
19 | 683003..683404 | PHAGE_Psychr_pOW20_A: phage terminase large subunit; SDY_0731; phage(gi472339822) | 2e-26 | Click |
20 | 683332..683625 | PHAGE_Vibrio_vB_VchM_138: putative TerL large-subunit terminase; SDY_0732; phage(gi422936562) | 3e-20 | Click |
21 | 683625..683945 | hypothetical protein; SDY_0733 | N/A | Click |
22 | 683996..684271 | PHAGE_Entero_P1: InsA; SDY_0734; phage(gi46401643) | 3e-48 | Click |
23 | 684316..684693 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0735; phage(gi16131317) | 2e-69 | Click |
24 | complement(684954..686081) | PHAGE_Acanth_mimivirus: putative RNA methyltransferase; SDY_0736; phage(gi311977789) | 2e-09 | Click |
25 | complement(686122..686610) | hypothetical protein; SDY_0737 | N/A | Click |
26 | complement(686671..687516) | putrescine transporter subunit: membrane component of ABC superfamily; SDY_0738 | N/A | Click |
27 | complement(687513..688466) | putrescine transporter subunit: membrane component of ABC superfamily; SDY_0739 | N/A | Click |
28 | complement(688476..689609) | PHAGE_Plankt_PaV_LD: ABC transporter; SDY_0740; phage(gi371496158) | 2e-20 | Click |
Region 6, total : 13 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 710477..712909 | PHAGE_Klebsi_KP15: Vs.6; SDY_0764; phage(gi294661496) | 4e-11 | Click |
2 | 713055..713711 | hypothetical protein; SDY_0765 | N/A | Click |
3 | complement(713708..714103) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_0766; phage(gi16131317) | 7e-29 | Click |
4 | complement(714683..715228) | putative regulatory protein; SDY_0767 | N/A | Click |
5 | 715646..716053 | PROPHAGE_Escher_Sakai: phage transposase; SDY_0768; phage(gi15834199) | 5e-30 | Click |
6 | complement(716050..716763) | PROPHAGE_Escher_CFT073: transposase insF; SDY_0769; phage(gi26249410) | 6e-136 | Click |
7 | complement(716904..717206) | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_0770; phage(gi21231087) | 1e-09 | Click |
8 | 717245..717574 | PHAGE_Entero_phiP27: putative tail fiber assembly protein; SDY_0771; phage(gi18249919) | 3e-15 | Click |
9 | 717561..718613 | PHAGE_Entero_phiP27: putative tail fiber protein; SDY_0772; phage(gi18249920) | 7e-55 | Click |
10 | 718914..719540 | PHAGE_Entero_phiP27: hypothetical protein P27p57; SDY_0773; phage(gi18249921) | 3e-72 | Click |
11 | 719801..720517 | PHAGE_Escher_D108: DNA modification protein Mom; SDY_0774; phage(gi281199700) | 1e-130 | Click |
12 | 720885..722144 | hypothetical protein; SDY_0775 | N/A | Click |
13 | complement(722385..723977) | PHAGE_Parame_AR158: hypothetical protein AR158_C788L; SDY_0776; phage(gi157953978) | 3e-33 | Click |
Region 7, total : 8 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(999324..1000109) | PROPHAGE_Escher_CFT073: transposase insF; SDY_1063; phage(gi26249410) | 8e-134 | Click |
2 | complement(1000250..1000552) | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1064; phage(gi21231087) | 1e-09 | Click |
3 | complement(1001080..1002129) | PHAGE_Entero_phiP27: putative tail fiber protein; SDY_1065; phage(gi18249920) | 3e-85 | Click |
4 | complement(1002153..1002641) | PHAGE_Entero_phiP27: putative tail fiber assembly protein; SDY_1066; phage(gi18249919) | 4e-62 | Click |
5 | complement(1002701..1002814) | putative phage tail fiber protein; SDY_1067 | N/A | Click |
6 | 1002853..1003155 | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1068; phage(gi21231087) | 2e-09 | Click |
7 | 1003296..1004009 | PROPHAGE_Escher_CFT073: transposase insF; SDY_1069; phage(gi26249410) | 5e-134 | Click |
8 | complement(1004265..1004660) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1070; phage(gi16131317) | 7e-29 | Click |
Region 8, total : 8 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1008318..1008851 | PHAGE_Provid_Redjac: phage structural protein; SDY_1077; phage(gi410490801) | 2e-05 | Click |
2 | complement(1008822..1009727) | PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SDY_1078; phage(gi24111655) | 4e-179 | Click |
3 | complement(1009685..1010050) | PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SDY_1079; phage(gi17546153) | 1e-45 | Click |
4 | complement(1010435..1011220) | PHAGE_Vibrio_vB_VpaM_MAR: putative tail protein; SDY_1080; phage(gi428782753) | 1e-24 | Click |
5 | complement(1011244..1011639) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1081; phage(gi16131317) | 7e-29 | Click |
6 | 1011834..1012043 | hypothetical protein; SDY_1082 | N/A | Click |
7 | complement(1012083..1012478) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1083; phage(gi16131317) | 9e-29 | Click |
8 | complement(1012902..1013573) | PHAGE_Pseudo_F116: hypothetical protein F116p67; SDY_1084; phage(gi56692976) | 1e-43 | Click |
Region 9, total : 14 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1107028..1107867) | PHAGE_Entero_Sf6: putative transposase OrfB; SDY_1195; phage(gi41057343) | 1e-167 | Click |
2 | complement(1107894..1108220) | PHAGE_Entero_Sf6: gene 56 protein; SDY_1196; phage(gi41057344) | 2e-49 | Click |
3 | complement(1108193..1108963) | PROPHAGE_Escher_CFT073: transposase insF; SDY_1197; phage(gi26249410) | 2e-135 | Click |
4 | complement(1109104..1109406) | PHAGE_Entero_Sf6: gene 56 protein; SDY_1198; phage(gi41057344) | 2e-09 | Click |
5 | 1109483..1109758 | PHAGE_Entero_P1: InsA; SDY_1199; phage(gi46401643) | 3e-48 | Click |
6 | 1109803..1110180 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1200; phage(gi16131317) | 2e-69 | Click |
7 | 1111027..1111422 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1201; phage(gi16131317) | 5e-28 | Click |
8 | 1111815..1112834 | PHAGE_Prochl_P_SSM2: phage tail fiber-like protein; SDY_1202; phage(gi61806166) | 4e-05 | Click |
9 | complement(1112809..1113204) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1203; phage(gi16131317) | 7e-29 | Click |
10 | 1113426..1116020 | PHAGE_Megavi_lba: hypothetical protein; SDY_1204; phage(gi448825769) | 8e-11 | Click |
11 | complement(1116391..1116657) | cell division topological specificity factor MinE; SDY_1205 | N/A | Click |
12 | complement(1116661..1117473) | PHAGE_Natria_PhiCh1: putative plasmid partitioning protein Soj; SDY_1206; phage(gi22091150) | 4e-06 | Click |
13 | complement(1117497..1118192) | septum formation inhibitor; SDY_1207 | N/A | Click |
14 | complement(1118832..1119227) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1208; phage(gi16131317) | 9e-29 | Click |
Region 10, total : 12 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1236040..1236315 | PHAGE_Entero_P1: InsA; SDY_1336; phage(gi46401643) | 3e-48 | Click |
2 | 1236360..1236737 | PHAGE_Entero_P1: InsB; SDY_1337; phage(gi46401642) | 4e-70 | Click |
3 | 1236766..1237191 | hypothetical protein; SDY_1338 | N/A | Click |
4 | 1237404..1238276 | 23S rRNA pseudouridylate synthase B; SDY_1339 | N/A | Click |
5 | complement(1238316..1238906) | PHAGE_Cyanop_PSS2: BtuR/CobO ATP:corrinoid adenosyltransferase; SDY_1340; phage(gi254729498) | 2e-15 | Click |
6 | complement(1238903..1239661) | PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; SDY_1341; phage(gi116326757) | 5e-11 | Click |
7 | 1239881..1240921 | PHAGE_Entero_WV8: putative head maturation protease; SDY_1342; phage(gi238801794) | 4e-13 | Click |
8 | complement(1240957..1241208) | hypothetical protein; SDY_1343 | N/A | Click |
9 | 1241588..1244185 | PHAGE_Cafete_BV_PW1: putative DNA topoisomerase IA; SDY_1344; phage(gi310831073) | 1e-89 | Click |
10 | 1244395..1245369 | transcriptional regulator CysB; SDY_1345 | N/A | Click |
11 | complement(1245629..1246006) | PHAGE_Entero_P1: InsB; SDY_1346; phage(gi46401642) | 4e-70 | Click |
12 | complement(1246051..1246326) | PHAGE_Entero_P1: InsA; SDY_1347; phage(gi46401643) | 3e-48 | Click |
Region 11, total : 21 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1274438..1275244) | PHAGE_Plankt_PaV_LD: ABC transporter; SDY_1377; phage(gi371496158) | 9e-17 | Click |
2 | complement(1275246..1276238) | PHAGE_Plankt_PaV_LD: ABC transporter; SDY_1378; phage(gi371496158) | 6e-10 | Click |
3 | complement(1276238..1277128) | SapC; SDY_1379 | N/A | Click |
4 | 1276904..1276916 | attL AGAAACTTCGCCA | N/A | Click |
5 | 1277263..1278492 | PHAGE_Entero_mEpX1: integrase; SDY_1380; phage(gi428781899) | 3e-120 | Click |
6 | 1278706..1278981 | PHAGE_Entero_P1: InsA; SDY_1381; phage(gi46401643) | 3e-48 | Click |
7 | complement(1279827..1280507) | PHAGE_Stx1_converting: exonuclease; SDY_1382; phage(gi302861167) | 8e-130 | Click |
8 | complement(1280504..1281289) | PHAGE_Stx1_converting: recombination protein Bet; SDY_1383; phage(gi302861168) | 1e-142 | Click |
9 | complement(1281295..1281591) | PHAGE_Stx2_c_86: host-nuclease inhibitor protein Gam; SDY_1384; phage(gi116222045) | 5e-45 | Click |
10 | complement(1281588..1282082) | hypothetical protein; SDY_1385 | N/A | Click |
11 | 1282475..1282777 | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1386; phage(gi21231087) | 2e-09 | Click |
12 | 1282813..1283229 | PROPHAGE_Escher_CFT073: transposase insF; SDY_1387; phage(gi26249410) | 8e-74 | Click |
13 | 1283258..1283692 | PROPHAGE_Escher_CFT073: transposase insF; SDY_1388; phage(gi26249410) | 2e-68 | Click |
14 | 1283865..1284812 | PHAGE_Stx1_converting: Shiga toxin 1 subunit A; SDY_1389; phage(gi302861195) | 1e-176 | Click |
15 | 1284822..1285091 | PHAGE_Stx1_converting: Shiga toxin 1 subunit B; SDY_1390; phage(gi302861196) | 4e-46 | Click |
16 | 1285601..1287511 | PHAGE_Escher_P13374: hypothetical protein; SDY_1391; phage(gi410491642) | 0.0 | Click |
17 | 1287698..1288105 | PHAGE_Stx1_converting: hypothetical protein Stx1_gp76; SDY_1392; phage(gi302861198) | 2e-51 | Click |
18 | 1287942..1287954 | attR AGAAACTTCGCCA | N/A | Click |
19 | 1288182..1288397 | PHAGE_Stx1_converting: holin; SDY_1393; phage(gi302861199) | 6e-34 | Click |
20 | 1288402..1288935 | PHAGE_Stx1_converting: endolysin; SDY_1394; phage(gi302861200) | 8e-93 | Click |
21 | complement(1289159..1289998) | PHAGE_Entero_Sf6: putative transposase OrfB; SDY_1395; phage(gi41057343) | 8e-170 | Click |
22 | 1290194..1290469 | PHAGE_Entero_P1: InsA; SDY_1396; phage(gi46401643) | 3e-48 | Click |
23 | 1290514..1290891 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1397; phage(gi16131317) | 2e-69 | Click |
Region 12, total : 29 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1316535..1317470) | PHAGE_Parame_FR483: hypothetical protein FR483_N404R; SDY_1426; phage(gi155370502) | 2e-08 | Click |
2 | 1317430..1317446 | attL TTGTATTGTTCTTTCTT | N/A | Click |
3 | complement(1317522..1317761) | PHAGE_Entero_phiP27: putative integrase; SDY_1427; phage(gi18249865) | 1e-24 | Click |
4 | complement(1317789..1318502) | PROPHAGE_Escher_CFT073: transposase insF; SDY_1428; phage(gi26249410) | 9e-137 | Click |
5 | complement(1318580..1318978) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1429; phage(gi16131317) | 5e-45 | Click |
6 | complement(1319000..1319275) | PHAGE_Entero_P1: InsA; SDY_1430; phage(gi46401643) | 3e-48 | Click |
7 | 1320100..1320495 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1431; phage(gi16131317) | 3e-28 | Click |
8 | 1321016..1321171 | PHAGE_Stx2_c_II: putative host killer protein; SDY_1432; phage(gi302393105) | 3e-19 | Click |
9 | 1321388..1321639 | hypothetical protein; SDY_1433 | N/A | Click |
10 | 1321986..1323035 | PHAGE_Entero_mEp460: hypothetical protein; SDY_1434; phage(gi428782365) | 2e-109 | Click |
11 | 1323048..1323422 | PHAGE_Escher_HK75: RusA-like protein; SDY_1435; phage(gi356870726) | 6e-36 | Click |
12 | 1323419..1324240 | PHAGE_Entero_HK225: late gene regulator Q; SDY_1436; phage(gi428782441) | 6e-87 | Click |
13 | 1324384..1324459 | tRNA | N/A | Click |
14 | 1324558..1324634 | tRNA | N/A | Click |
15 | 1324726..1325001 | PHAGE_Entero_P1: InsA; SDY_1439; phage(gi46401643) | 3e-48 | Click |
16 | 1325046..1325423 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1440; phage(gi16131317) | 1e-68 | Click |
17 | complement(1325794..1326018) | hypothetical protein; SDY_1441 | N/A | Click |
18 | 1326213..1326608 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1442; phage(gi16131317) | 9e-29 | Click |
19 | 1326609..1326815 | hypothetical protein; SDY_1443 | N/A | Click |
20 | 1326985..1327287 | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1444; phage(gi21231087) | 1e-09 | Click |
21 | 1327428..1328141 | PROPHAGE_Escher_CFT073: transposase insF; SDY_1445; phage(gi26249410) | 2e-134 | Click |
22 | complement(1328535..1328930) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1446; phage(gi16131317) | 7e-29 | Click |
23 | 1329125..1329325 | hypothetical protein; SDY_1447 | N/A | Click |
24 | 1329300..1329542 | PHAGE_Entero_2008: hypothetical protein YYZ_gp42; SDY_1448; phage(gi209427766) | 5e-32 | Click |
25 | 1329900..1330265 | PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SDY_1449; phage(gi17546153) | 1e-45 | Click |
26 | 1330223..1331128 | PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SDY_1450; phage(gi24111655) | 2e-178 | Click |
27 | complement(1331593..1332306) | PROPHAGE_Escher_CFT073: transposase insF; SDY_1451; phage(gi26249410) | 2e-134 | Click |
28 | complement(1332447..1332749) | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1452; phage(gi21231087) | 1e-09 | Click |
29 | 1333431..1333796 | PHAGE_Entero_phiP27: hypothetical protein P27p57; SDY_1453; phage(gi18249921) | 8e-54 | Click |
30 | complement(1333997..1334854) | Iron transport protein, inner membrane component; SDY_1454 | N/A | Click |
31 | complement(1334851..1335708) | iron transport protein, inner membrane component; SDY_1455 | N/A | Click |
32 | complement(1335705..1336532) | PHAGE_Plankt_PaV_LD: ABC transporter; SDY_1456; phage(gi371496158) | 5e-13 | Click |
33 | 1337817..1337833 | attR TTGTATTGTTCTTTCTT | N/A | Click |
Region 13, total : 28 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1742738..1743484) | PHAGE_Plankt_PaV_LD: ABC transporter; SDY_1913; phage(gi371496158) | 2e-09 | Click |
2 | complement(1743494..1744261) | hypothetical protein; SDY_1914 | N/A | Click |
3 | complement(1744550..1745287) | PHAGE_Escher_D108: DNA modification protein Mom; SDY_1915; phage(gi281199700) | 9e-140 | Click |
4 | complement(1745479..1746072) | PHAGE_Escher_D108: G region invertase; SDY_1916; phage(gi281199698) | 2e-109 | Click |
5 | 1746264..1746758 | PHAGE_Entero_Mu: tail fiber fragment; SDY_1917; phage(gi19584574) | 7e-88 | Click |
6 | complement(1746783..1747631) | PROPHAGE_Escher_CFT073: transposase insF; SDY_1918; phage(gi26249410) | 2e-158 | Click |
7 | complement(1749620..1750015) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_1919; phage(gi16131317) | 7e-29 | Click |
8 | 1750428..1750730 | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_1920; phage(gi21231087) | 4e-09 | Click |
9 | 1750871..1751584 | PROPHAGE_Escher_CFT073: transposase insF; SDY_1921; phage(gi26249410) | 6e-135 | Click |
10 | complement(1751625..1752287) | PHAGE_Escher_TL_2011c: helicase domain protein; SDY_1922; phage(gi418487063) | 3e-124 | Click |
11 | complement(1752281..1752652) | PHAGE_Escher_TL_2011c: hypothetical protein; SDY_1923; phage(gi418487092) | 2e-13 | Click |
12 | complement(1753199..1753402) | PHAGE_Escher_TL_2011c: hypothetical protein; SDY_1924; phage(gi418487091) | 2e-32 | Click |
13 | 1753498..1754211 | PHAGE_Escher_TL_2011c: repressor protein CI; SDY_1925; phage(gi418487062) | 9e-134 | Click |
14 | 1754305..1755774 | PHAGE_Escher_TL_2011c: modification methylase BsuBI; SDY_1926; phage(gi418487061) | 0.0 | Click |
15 | 1755771..1756724 | PHAGE_Escher_TL_2011c: type II restriction enzyme BsuBI; SDY_1927; phage(gi418487060) | 0.0 | Click |
16 | 1757618..1758034 | PHAGE_Escher_TL_2011c: phage regulatory protein, Rha family; SDY_1928; phage(gi418487059) | 2e-66 | Click |
17 | 1758031..1758264 | PHAGE_Escher_TL_2011c: hypothetical protein; SDY_1929; phage(gi418487090) | 5e-38 | Click |
18 | complement(1758417..1758938) | PHAGE_Entero_Sf6: putative transposase OrfB; SDY_1930; phage(gi41057343) | 4e-103 | Click |
19 | complement(1758907..1759257) | PHAGE_Entero_Sf6: putative transposase OrfB; SDY_1931; phage(gi41057343) | 6e-58 | Click |
20 | complement(1759284..1759586) | PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SDY_1932; phage(gi24373865) | 1e-09 | Click |
21 | 1759633..1759800 | PHAGE_Escher_TL_2011c: hypothetical protein; SDY_1933; phage(gi418487058) | 9e-21 | Click |
22 | 1759856..1760131 | PHAGE_Entero_P1: InsA; SDY_1934; phage(gi46401643) | 3e-48 | Click |
23 | complement(1761846..1762160) | PHAGE_Ostreo_OlV1: hypothetical protein; SDY_1936; phage(gi313844185) | 2e-07 | Click |
24 | complement(1762235..1762456) | peripheral inner membrane phage-shock protein; SDY_1937 | N/A | Click |
25 | complement(1762465..1762824) | DNA-binding transcriptional activator PspC; SDY_1938 | N/A | Click |
26 | complement(1762824..1763048) | phage shock protein B; SDY_1939 | N/A | Click |
27 | complement(1763102..1763770) | PHAGE_Bathyc_BpV1: hypothetical protein; SDY_1940; phage(gi313768111) | 7e-06 | Click |
28 | 1763937..1764914 | phage shock protein operon transcriptional activator; SDY_1941 | N/A | Click |
Region 14, total : 20 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1807900..1808691) | PROPHAGE_Escher_CFT073: transposase insF; SDY_1990; phage(gi26249410) | 6e-130 | Click |
2 | 1808751..1809053 | PHAGE_Entero_Sf6: gene 56 protein; SDY_1991; phage(gi41057344) | 2e-49 | Click |
3 | 1809080..1809919 | PHAGE_Entero_Sf6: putative transposase OrfB; SDY_1992; phage(gi41057343) | 8e-170 | Click |
4 | complement(1809934..1810203) | hypothetical protein; SDY_1993 | N/A | Click |
5 | 1810224..1810300 | tRNA | N/A | Click |
6 | 1810302..1810378 | tRNA | N/A | Click |
7 | 1810381..1810456 | tRNA | N/A | Click |
8 | 1810460..1810534 | tRNA | N/A | Click |
9 | 1810827..1811042 | PHAGE_Escher_P13374: lysis protein, holin; SDY_1998; phage(gi410491645) | 3e-27 | Click |
10 | 1811227..1811529 | PHAGE_Entero_Sf6: gene 56 protein; SDY_1999; phage(gi41057344) | 4e-08 | Click |
11 | 1811670..1812200 | PROPHAGE_Escher_CFT073: transposase insF; SDY_2000; phage(gi26249410) | 2e-99 | Click |
12 | complement(1812689..1814404) | PHAGE_Ostreo_OlV1: hypothetical protein; SDY_2001; phage(gi313843974) | 1e-07 | Click |
13 | 1815161..1815556 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2002; phage(gi16131317) | 7e-29 | Click |
14 | 1816133..1817884 | PHAGE_Gifsy_1: leucine-rich repeat protein; SDY_2003; phage(gi169257209) | 2e-08 | Click |
15 | complement(1818373..1818903) | PROPHAGE_Escher_CFT073: transposase insF; SDY_2004; phage(gi26249410) | 2e-99 | Click |
16 | complement(1819095..1819346) | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_2005; phage(gi21231087) | 4e-05 | Click |
17 | complement(1819408..1819680) | PHAGE_Entero_phiP27: hypothetical protein P27p57; SDY_2006; phage(gi18249921) | 5e-35 | Click |
18 | complement(1819681..1820076) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2007; phage(gi16131317) | 1e-27 | Click |
19 | 1820489..1820791 | PHAGE_Entero_Sf6: gene 56 protein; SDY_2008; phage(gi41057344) | 3e-09 | Click |
20 | 1820932..1821462 | PROPHAGE_Escher_CFT073: transposase insF; SDY_2009; phage(gi26249410) | 5e-98 | Click |
21 | 1821551..1821796 | hypothetical protein; SDY_2010 | N/A | Click |
22 | 1821904..1822899 | 6-phosphogluconolactonase; SDY_2011 | N/A | Click |
23 | complement(1822940..1823392) | hypothetical protein; SDY_2012 | N/A | Click |
24 | complement(1823444..1823839) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2013; phage(gi16131317) | 5e-28 | Click |
Region 15, total : 9 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1918771..1919127 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2114; phage(gi16131317) | 7e-18 | Click |
2 | complement(1919220..1919627) | PHAGE_Pseudo_KPP12: putative structural protein; SDY_2115; phage(gi431811107) | 3e-09 | Click |
3 | complement(1919856..1920797) | PHAGE_Vibrio_CP_T1: putative major capsid protein; SDY_2116; phage(gi418489228) | 9e-16 | Click |
4 | complement(1920809..1921069) | putative bacteriophage protein; SDY_2117 | N/A | Click |
5 | complement(1921070..1921315) | putative bacteriophage protein; SDY_2118 | N/A | Click |
6 | complement(1921319..1922191) | PHAGE_Edward_MSW_3: putative head protein; SDY_2119; phage(gi448261038) | 7e-07 | Click |
7 | complement(1922269..1922532) | hypothetical protein; SDY_2120 | N/A | Click |
8 | complement(1923170..1924252) | PHAGE_Edward_MSW_3: putative portal protein; SDY_2121; phage(gi448261029) | 4e-27 | Click |
9 | complement(1924345..1924722) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2122; phage(gi16131317) | 2e-69 | Click |
Region 16, total : 21 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2208003..2208731 | PHAGE_Plankt_PaV_LD: ABC transporter; SDY_2404; phage(gi371496158) | 4e-31 | Click |
2 | 2208749..2209480 | PHAGE_Cafete_BV_PW1: putative ABC-type amino acid transporter; SDY_2405; phage(gi310831221) | 1e-06 | Click |
3 | 2209487..2210203 | arginine transporter permease subunit ArtQ; SDY_2406 | N/A | Click |
4 | 2210203..2210871 | arginine transporter permease subunit ArtM; SDY_2407 | N/A | Click |
5 | 2210907..2210934 | attL CTGATAAGACGCGCCAGCGTCGCATCAG | N/A | Click |
6 | complement(2211498..2211713) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2409; phage(gi16131317) | 4e-11 | Click |
7 | complement(2211710..2212519) | PROPHAGE_Escher_CFT073: transposase insF; SDY_2410; phage(gi26249410) | 9e-134 | Click |
8 | complement(2212660..2212962) | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_2411; phage(gi21231087) | 1e-09 | Click |
9 | complement(2213019..2213162) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2412; phage(gi16131317) | 7e-08 | Click |
10 | 2213357..2213557 | hypothetical protein; SDY_2413 | N/A | Click |
11 | complement(2213696..2214424) | PHAGE_Escher_HK75: KilA; SDY_2414; phage(gi356870724) | 2e-121 | Click |
12 | complement(2214493..2215356) | PHAGE_Entero_Min27: hypothetical protein; SDY_2415; phage(gi170783645) | 1e-106 | Click |
13 | 2215810..2216118 | PHAGE_Entero_N15: gp48; SDY_2416; phage(gi9630515) | 2e-07 | Click |
14 | complement(2216333..2216743) | PHAGE_Escher_HK75: NinB; SDY_2417; phage(gi356870721) | 1e-72 | Click |
15 | complement(2216796..2217584) | PROPHAGE_Escher_CFT073: transposase insF; SDY_2418; phage(gi26249410) | 3e-136 | Click |
16 | complement(2217725..2218027) | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_2419; phage(gi21231087) | 7e-10 | Click |
17 | 2218110..2219165 | PHAGE_Entero_mEp235: integrase; SDY_2420; phage(gi428781836) | 0.0 | Click |
18 | complement(2219223..2219783) | hypothetical protein; SDY_2421 | N/A | Click |
19 | complement(2219780..2220256) | hypothetical protein; SDY_2422 | N/A | Click |
20 | complement(2220357..2222984) | PHAGE_Lactoc_949: putative DNA gyrase subunit A-topoisomerase; SDY_2423; phage(gi327197938) | 9e-74 | Click |
21 | 2223131..2223853 | PHAGE_Microm_12T: hypothetical protein; SDY_2424; phage(gi472342811) | 7e-09 | Click |
22 | complement(2223994..2226156) | PHAGE_Cafete_BV_PW1: hypothetical protein; SDY_2425; phage(gi310831349) | 3e-08 | Click |
23 | 2230787..2230814 | attR CTGATAAGACGCGCCAGCGTCGCATCAG | N/A | Click |
Region 17, total : 13 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(2554379..2554819) | PHAGE_Entero_2: DNA-invertase; SDY_2752; phage(gi169936026) | 1e-74 | Click |
2 | 2555309..2557135 | PHAGE_Acanth_mimivirus: putative leucine-rich repeat protein; SDY_2753; phage(gi311977765) | 4e-09 | Click |
3 | complement(2557295..2558008) | PROPHAGE_Escher_CFT073: transposase insF; SDY_2754; phage(gi26249410) | 8e-135 | Click |
4 | complement(2558149..2558451) | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_2755; phage(gi21231087) | 1e-09 | Click |
5 | 2558467..2558766 | PROPHAGE_Escher_CFT073: transposase insF; SDY_2756; phage(gi26249410) | 5e-44 | Click |
6 | complement(2558866..2559231) | PHAGE_Entero_phiP27: hypothetical protein P27p57; SDY_2757; phage(gi18249921) | 5e-46 | Click |
7 | complement(2559444..2560319) | PHAGE_Entero_phiP27: putative tail fiber protein; SDY_2758; phage(gi18249920) | 4e-37 | Click |
8 | complement(2560408..2560680) | PHAGE_Entero_phiP27: putative tail fiber protein; SDY_2759; phage(gi18249920) | 6e-39 | Click |
9 | complement(2560844..2561203) | hypothetical protein; SDY_2760 | N/A | Click |
10 | 2561398..2561793 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2761; phage(gi16131317) | 7e-29 | Click |
11 | complement(2561768..2562136) | hypothetical protein; SDY_2762 | N/A | Click |
12 | 2562219..2562494 | PHAGE_Entero_P1: InsA; SDY_2763; phage(gi46401643) | 1e-47 | Click |
13 | 2562539..2562916 | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2764; phage(gi16131317) | 1e-68 | Click |
Region 18, total : 10 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(2567511..2568713) | PROPHAGE_Escher_MG1655: IS4 transposase; SDY_2769; phage(gi16132099) | 0.0 | Click |
2 | 2569222..2569524 | PROPHAGE_Xantho_33913: ISxac3 transposase; SDY_2770; phage(gi21231087) | 1e-09 | Click |
3 | 2569665..2570378 | PROPHAGE_Escher_CFT073: transposase insF; SDY_2771; phage(gi26249410) | 3e-135 | Click |
4 | 2570452..2571057 | PHAGE_Aeromo_vB_AsaM_56: hypothetical protein; SDY_2772; phage(gi422937564) | 8e-32 | Click |
5 | 2571250..2571927 | PHAGE_Entero_P2: gpH; SDY_2773; phage(gi9630346) | 7e-56 | Click |
6 | 2571971..2572381 | PROPHAGE_Escher_CFT073: transposase insC; SDY_2774; phage(gi26249447) | 3e-52 | Click |
7 | 2572405..2573133 | PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SDY_2775; phage(gi16130763) | 1e-137 | Click |
8 | complement(2573130..2573525) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2776; phage(gi16131317) | 7e-29 | Click |
9 | 2573720..2574028 | hypothetical protein; SDY_2777 | N/A | Click |
10 | 2574436..2575233 | PHAGE_Pseudo_MP1412: diguanylate-cyclase GGDEF domain; SDY_2778; phage(gi399529005) | 9e-08 | Click |
Region 19, total : 11 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(2649524..2650858) | PHAGE_Strept_TG1: putative regulator, GntR family; SDY_2864; phage(gi410491962) | 1e-05 | Click |
2 | 2650946..2651377 | hypothetical protein; SDY_2865 | N/A | Click |
3 | 2651587..2651832 | PHAGE_Mycoba_Porky: gp37; SDY_2866; phage(gi194303333) | 6e-10 | Click |
4 | 2651829..2652239 | PHAGE_Bacill_SP10: ribonucleotide reductase stimulatory protein; SDY_2867; phage(gi418489617) | 9e-14 | Click |
5 | 2652251..2654101 | PHAGE_Entero_phiEF24C: putative ribonucleotide reductase; SDY_2868; phage(gi158079505) | 4e-176 | Click |
6 | 2654366..2655334 | PHAGE_Mycoba_Myrna: gp256; SDY_2869; phage(gi203454817) | 7e-126 | Click |
7 | complement(2655328..2655705) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2870; phage(gi16131317) | 2e-69 | Click |
8 | complement(2655750..2656025) | PHAGE_Entero_P1: InsA; SDY_2871; phage(gi46401643) | 3e-48 | Click |
9 | 2656201..2657226 | PHAGE_Plankt_PaV_LD: ABC transporter; SDY_2872; phage(gi371496158) | 1e-21 | Click |
10 | 2657219..2658283 | PHAGE_Lactob_KC5a: putative minor tail protein; SDY_2873; phage(gi90592623) | 5e-05 | Click |
11 | complement(2658396..2658791) | PROPHAGE_Escher_MG1655: IS1 transposase B; SDY_2874; phage(gi16131317) | 7e-29 | Click |