Definition Burkholderia pseudomallei 1710b chromosome chromosome I, complete sequence.
Accession NC_007434
Length 4,126,292
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 6 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1015830..1015841  attL    GGAAGCCGCCGC  N/A  Click
2 complement(1016158..1017396)  PROPHAGE_Xantho_306: phage-related integrase; BURPS1710b_0967; phage(gi21242262)  5e-23  Click
3 complement(1017601..1017677)  tRNA  N/A  Click
4 complement(1017918..1019576)  PHAGE_Burkho_phi1026b: gp59; BURPS1710b_0969; phage(gi38707949)  3e-46  Click
5 complement(1019799..1022252)  PHAGE_Macaci_4: LF3; BURPS1710b_0970; phage(gi51518075)  2e-15  Click
6 complement(1022293..1023918)  PHAGE_Tsukam_TPA2: hypothetical protein; BURPS1710b_0972; phage(gi326425054)  6e-05  Click
7 1022326..1023396  PROPHAGE_Escher_MG1655: DNA strand exchange and recombination protein with protease and nuclease activity; BURPS1710b_0971; phage(gi16130606)  2e-131  Click
8 1023396..1024379  PHAGE_Salmon_1: putative bacteriophage tail fiber protein; Lambda gpN homolog; BURPS1710b_0973; phage(gi169257204)  6e-05  Click
9 1031216..1031227  attR    GGAAGCCGCCGC  N/A  Click
Region 2, total : 48 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1755835..1755846  attL    CGACGGACGGAC  N/A  Click
2 1758105..1760414  PHAGE_Pseudo_phiIBB_PF7A: RNA polymerase; BURPS1710b_1652; phage(gi326536914)  6e-66  Click
3 complement(1762688..1764136)  PROPHAGE_Xantho_306: integrase; BURPS1710b_1653; phage(gi21242250)  2e-12  Click
4 1764233..1764286  attL    ATAAGTGGTCGGAGCGATAGGATTCGAACCTACGACCCTCTGATCCCAAATCAG  N/A  Click
5 complement(1764238..1764312)  tRNA  N/A  Click
6 complement(1764416..1765516)  PHAGE_Burkho_phi1026b: gp33; BURPS1710b_1655; phage(gi38707923)  0.0  Click
7 1766023..1766301  PHAGE_Burkho_phi1026b: gp36; BURPS1710b_1656; phage(gi38707926)  6e-36  Click
8 1766280..1766555  PHAGE_Burkho_phi1026b: gp37; BURPS1710b_1657; phage(gi38707927)  2e-39  Click
9 complement(1766628..1767638)  PHAGE_Burkho_phi1026b: gp38; BURPS1710b_1658; phage(gi38707928)  0.0  Click
10 complement(1768413..1770386)  PHAGE_Burkho_phi1026b: gp43; BURPS1710b_1659; phage(gi38707933)  0.0  Click
11 complement(1770634..1771029)  PHAGE_Burkho_phi1026b: gp45; BURPS1710b_1660; phage(gi38707935)  9e-72  Click
12 complement(1771032..1771697)  PHAGE_Burkho_phi1026b: gp46; BURPS1710b_1661; phage(gi38707936)  5e-126  Click
13 complement(1771711..1772505)  PHAGE_Burkho_phi1026b: gp47; BURPS1710b_1662; phage(gi38707937)  5e-149  Click
14 complement(1772692..1773717)  PHAGE_Burkho_phi1026b: gp48; BURPS1710b_1663; phage(gi38707938)  1e-149  Click
15 complement(1774932..1775462)  PHAGE_Burkho_phi1026b: gp53; BURPS1710b_1664; phage(gi38707943)  3e-60  Click
16 complement(1775514..1775621)  PHAGE_Burkho_phi1026b: gp55; BURPS1710b_1665; phage(gi38707945)  1e-14  Click
17 1776280..1777434  PHAGE_Burkho_phi1026b: gp58; BURPS1710b_1666; phage(gi38707948)  1e-170  Click
18 1777544..1778878  PHAGE_Burkho_phi1026b: gp59; BURPS1710b_1667; phage(gi38707949)  0.0  Click
19 1780841..1781320  PHAGE_Burkho_phi1026b: gp65; BURPS1710b_1668; phage(gi38707955)  2e-80  Click
20 1781335..1782552  PHAGE_Equid__1: envelope glycoprotein J; BURPS1710b_1669; phage(gi50313312)  8e-07  Click
21 1782557..1783693  PHAGE_Burkho_phiE125: putative DNA cytosine methylase; BURPS1710b_1670; phage(gi17975218)  0.0  Click
22 1784015..1784836  PHAGE_Burkho_phi1026b: gp68; BURPS1710b_1671; phage(gi38707958)  2e-148  Click
23 1785304..1786239  PHAGE_Burkho_phi1026b: gp71; BURPS1710b_1672; phage(gi38707961)  5e-179  Click
24 1786236..1786787  PHAGE_Burkho_phi1026b: gp72; BURPS1710b_1673; phage(gi38707962)  4e-98  Click
25 1788174..1788821  PHAGE_Burkho_phi1026b: gp77; BURPS1710b_1674; phage(gi38707967)  2e-105  Click
26 1791577..1795038  patatin family phospholipase; BURPS1710b_1675  N/A  Click
27 complement(1795833..1796300)  PHAGE_Burkho_phi1026b: gp80; BURPS1710b_1676; phage(gi38707970)  3e-66  Click
28 1796534..1796890  PHAGE_Burkho_phi1026b: gp82; BURPS1710b_1677; phage(gi38707972)  4e-64  Click
29 1797038..1797523  PHAGE_Burkho_phi1026b: gp1; BURPS1710b_1678; phage(gi38707891)  2e-89  Click
30 1797524..1799248  PHAGE_Burkho_phi1026b: gp2; BURPS1710b_1679; phage(gi38707892)  0.0  Click
31 1799308..1800558  PHAGE_Burkho_phi1026b: gp3; BURPS1710b_1680; phage(gi38707893)  0.0  Click
32 1800539..1801225  PHAGE_Burkho_phi1026b: gp4; BURPS1710b_1681; phage(gi38707894)  4e-128  Click
33 1801228..1802484  PHAGE_Burkho_phi1026b: gp5; BURPS1710b_1682; phage(gi38707895)  0.0  Click
34 1802776..1803138  PHAGE_Burkho_phi1026b: gp7; BURPS1710b_1683; phage(gi38707897)  2e-60  Click
35 1803462..1803884  PHAGE_Burkho_phi1026b: gp9; BURPS1710b_1684; phage(gi38707899)  9e-74  Click
36 1803881..1804228  PHAGE_Burkho_phi1026b: gp10; BURPS1710b_1685; phage(gi38707900)  7e-61  Click
37 1804290..1804748  PHAGE_Burkho_phi1026b: gp11; BURPS1710b_1686; phage(gi38707901)  1e-81  Click
38 1804776..1805240  PHAGE_Burkho_phi1026b: gp12; BURPS1710b_1687; phage(gi38707902)  3e-85  Click
39 1805538..1809602  PHAGE_Burkho_phi1026b: gp14; BURPS1710b_1688; phage(gi38707904)  0.0  Click
40 1809599..1809937  PHAGE_Burkho_phi1026b: gp15; BURPS1710b_1689; phage(gi38707905)  1e-61  Click
41 1809946..1811334  PHAGE_Burkho_phi1026b: gp16; BURPS1710b_1690; phage(gi38707906)  0.0  Click
42 1811331..1812014  PHAGE_Burkho_phi1026b: gp17; BURPS1710b_1691; phage(gi38707907)  8e-135  Click
43 1812064..1812816  PHAGE_Burkho_phi1026b: gp18; BURPS1710b_1692; phage(gi38707908)  1e-149  Click
44 1812831..1813397  PHAGE_Burkho_phi1026b: gp19; BURPS1710b_1693; phage(gi38707909)  7e-101  Click
45 1813421..1816699  PHAGE_Burkho_phi1026b: gp20; BURPS1710b_1694; phage(gi38707910)  0.0  Click
46 1817992..1818483  PHAGE_Burkho_phi1026b: gp24; BURPS1710b_1695; phage(gi38707914)  2e-91  Click
47 1818483..1819028  PHAGE_Burkho_phi1026b: gp25; BURPS1710b_1696; phage(gi38707915)  4e-97  Click
48 1819171..1819959  PHAGE_Burkho_phi1026b: gp26; BURPS1710b_1697; phage(gi38707916)  7e-155  Click
49 1820212..1820946  PHAGE_Burkho_phi1026b: gp27; BURPS1710b_1698; phage(gi38707917)  8e-141  Click
50 1822420..1823538  PHAGE_Burkho_phi1026b: gp30; BURPS1710b_1699; phage(gi38707920)  0.0  Click
51 complement(1823671..1824312)  PHAGE_Burkho_phi1026b: gp31; BURPS1710b_1700; phage(gi38707921)  7e-122  Click
52 1825262..1825315  attR    ATAAGTGGTCGGAGCGATAGGATTCGAACCTACGACCCTCTGATCCCAAATCAG  N/A  Click
53 1837766..1837777  attR    CGACGGACGGAC  N/A  Click
Region 3, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2105804..2106214  PROPHAGE_Brucel_1330: ISBm1, transposase orfA; BURPS1710b_1928; phage(gi23501424)  9e-12  Click
2 complement(2106451..2106912)  hypothetical protein; BURPS1710b_1929  N/A  Click
3 2106911..2108851  hypothetical protein; BURPS1710b_1930  N/A  Click
4 complement(2107157..2108836)  putative exported heme utilisation related protein; BURPS1710b_1931  N/A  Click
5 2108835..2111951  PHAGE_Singap_iridovirus: hypothetical protein ORF141R; BURPS1710b_1933; phage(gi56692778)  1e-20  Click
6 complement(2108987..2110252)  PHAGE_Strept_2972: tail protein; BURPS1710b_1932; phage(gi66391777)  9e-15  Click
7 complement(2110249..2111994)  PHAGE_Saimir_1: transcriptional regulator ICP4; BURPS1710b_1934; phage(gi312162868)  2e-08  Click
8 2110279..2112129  PHAGE_Emilia_86: hypothetical protein EhV364; BURPS1710b_1935; phage(gi73852838)  2e-26  Click
9 complement(2110302..2112209)  PHAGE_Equid__9: envelope glycoprotein J; BURPS1710b_1936; phage(gi216905924)  1e-26  Click
10 2112553..2112750  putative fimbriae assembly-like protein; BURPS1710b_1937  N/A  Click
11 2112833..2113333  hypothetical protein; BURPS1710b_1938  N/A  Click
12 2113330..2113797  hypothetical protein; BURPS1710b_1939  N/A  Click
13 2113730..2114776  CpaB family Flp pilus assembly protein; BURPS1710b_1940  N/A  Click
14 complement(2113811..2117482)  PHAGE_Helico_2: hypothetical protein; BURPS1710b_1942; phage(gi370703038)  3e-10  Click
15 2114840..2116165  PHAGE_Pseudo_Pf3: hypothetical protein Pf3_5; BURPS1710b_1941; phage(gi9626321)  4e-15  Click
16 2116232..2117470  putative fimbriae assembly protein; BURPS1710b_1943  N/A  Click
17 2117474..2118817  type II/IV secretion system protein; BURPS1710b_1944  N/A  Click
18 2118810..2119817  putative fimbriae-related outer membrane protein; BURPS1710b_1945  N/A  Click
19 2119823..2120833  hypothetical protein; BURPS1710b_1946  N/A  Click
20 2120221..2121840  PHAGE_Macaci_4: LF3; BURPS1710b_1947; phage(gi51518075)  2e-10  Click
Region 4, total : 27 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2614671..2616887  PHAGE_Human__8: LANA; BURPS1710b_2340; phage(gi139472804)  4e-12  Click
2 complement(2614836..2616818)  PHAGE_Parame_FR483: hypothetical protein FR483_N110R; BURPS1710b_2341; phage(gi155370208)  2e-88  Click
3 2617043..2618263  PHAGE_Ralsto_phiRSA1: transposase IRSO15-like; BURPS1710b_2342; phage(gi145708108)  0.0  Click
4 complement(2618333..2618926)  phosphoribosyl transferase domain-containing protein; BURPS1710b_2343  N/A  Click
5 complement(2618933..2620279)  PHAGE_Megavi_lba: adenylosuccinate synthetase; BURPS1710b_2344; phage(gi448826112)  1e-68  Click
6 complement(2620404..2621552)  ATP phosphoribosyltransferase regulatory subunit; BURPS1710b_2345  N/A  Click
7 complement(2621880..2622779)  PROPHAGE_Escher_Sakai: FtsH protease regulator HflC; BURPS1710b_2346; phage(gi15834405)  2e-43  Click
8 2622766..2624247  hypothetical protein; BURPS1710b_2348  N/A  Click
9 complement(2622796..2624124)  PROPHAGE_Escher_Sakai: FtsH protease regulator HflK; BURPS1710b_2347; phage(gi15834404)  3e-62  Click
10 complement(2624206..2625384)  GTP-binding protein HflX; BURPS1710b_2349  N/A  Click
11 complement(2625815..2627152)  GTP-binding protein EngA; BURPS1710b_2350  N/A  Click
12 complement(2627428..2628573)  PQQ repeat-containing protein; BURPS1710b_2351  N/A  Click
13 complement(2628618..2629247)  hypothetical protein; BURPS1710b_2352  N/A  Click
14 complement(2629300..2630640)  histidyl-tRNA synthetase; BURPS1710b_2353  N/A  Click
15 complement(2630321..2631925)  PHAGE_Human__4: BHLF1; BURPS1710b_2354; phage(gi82503203)  2e-12  Click
16 complement(2630659..2631963)  4-hydroxy-3-methylbut-2-en-1-yl diphosphate synthase; BURPS1710b_2355  N/A  Click
17 complement(2632053..2633135)  PHAGE_Gifsy_1: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; BURPS1710b_2356; phage(gi169257214)  8e-09  Click
18 complement(2633283..2634419)  PHAGE_Acanth_mimivirus: putative radical SAM enzyme; BURPS1710b_2357; phage(gi311978166)  2e-10  Click
19 complement(2634461..2634886)  PHAGE_Megavi_lba: nucleoside diphosphate kinase; BURPS1710b_2358; phage(gi448825436)  1e-23  Click
20 2635135..2635833  PHAGE_Camelp_virus: CMLV006; BURPS1710b_2359; phage(gi18640240)  3e-18  Click
21 complement(2635907..2637304)  PHAGE_Acanth_moumouvirus: SAM-dependent methyltransferase; BURPS1710b_2360; phage(gi441432344)  9e-08  Click
22 2637382..2638242  endonuclease/exonuclease/phosphatase family protein; BURPS1710b_2361  N/A  Click
23 2637408..2639195  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp141; BURPS1710b_2362; phage(gi116326827)  2e-09  Click
24 complement(2638209..2638406)  hypothetical protein; BURPS1710b_2363  N/A  Click
25 complement(2638416..2639192)  PHAGE_Brucel_Tb: putative DNA-PolB associated Exonuclease; BURPS1710b_2364; phage(gi418487737)  5e-09  Click
26 complement(2639200..2640279)  PHAGE_Synech_S_CBS3: group 2 RNA polymerase sigma factor; BURPS1710b_2365; phage(gi331028036)  3e-36  Click
27 complement(2640291..2641169)  PHAGE_Clostr_phiZP2: putative lysozyme-peptidase; BURPS1710b_2366; phage(gi392972703)  4e-11  Click
28 complement(2641193..2642161)  PHAGE_Cercop_2: transcriptional regulator ICP4; BURPS1710b_2367; phage(gi56694796)  3e-05  Click