| Definition | Shigella sonnei Ss046 plasmid pSS_046, complete sequence. |
|---|---|
| Accession | NC_007385 |
| Length | 214,396 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 32 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(48324..48854) | PROPHAGE_Escher_CFT073: transposase insF; SSON_P051; phage(gi26249410) | 2e-94 | Click |
| 2 | complement(48995..49297) | PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_P052; phage(gi21231087) | 1e-09 | Click |
| 3 | 49336..49803 | hypothetical protein; SSON_P053 | N/A | Click |
| 4 | 50243..50713 | PROPHAGE_Shewan_MR-1: ISSod6, transposase; SSON_P054; phage(gi24374783) | 2e-14 | Click |
| 5 | 50719..51108 | PROPHAGE_Shewan_MR-1: ISSod6, transposase; SSON_P055; phage(gi24374783) | 1e-14 | Click |
| 6 | 51223..52254 | PROPHAGE_Escher_EDL933: putative transposase; SSON_P056; phage(gi15803522) | 6e-146 | Click |
| 7 | complement(52274..52525) | hypothetical protein; SSON_P057 | N/A | Click |
| 8 | 53671..55368 | PHAGE_Acanth_mimivirus: putative leucine-rich repeat protein; SSON_P058; phage(gi311977765) | 2e-09 | Click |
| 9 | 55796..57520 | PHAGE_Melano_entomopoxvirus: ORF MSV257 leucine rich repeat gene family protein, similar to Amsacta moorei entomopoxvirus Q3 ORF SW:P28854; SSON_P059; phage(gi9631420) | 7e-07 | Click |
| 10 | 57572..57898 | PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SSON_P060; phage(gi157166066) | 1e-55 | Click |
| 11 | 57898..58785 | PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SSON_P061; phage(gi157166067) | 5e-172 | Click |
| 12 | 59338..60243 | IS1294 orf; SSON_P062 | N/A | Click |
| 13 | 60545..60994 | PROPHAGE_Brucel_1330: ISBm1, transposase orfA; SSON_P063; phage(gi23501424) | 2e-15 | Click |
| 14 | 61000..61389 | PROPHAGE_Shewan_MR-1: ISSod6, transposase; SSON_P064; phage(gi24374783) | 1e-14 | Click |
| 15 | complement(61538..62992) | OspC2; SSON_P065 | N/A | Click |
| 16 | 63417..63713 | PROPHAGE_Brucel_1330: ISBm1, transposase orfA; SSON_P066; phage(gi23501424) | 3e-14 | Click |
| 17 | 63936..64439 | PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_P067; phage(gi16131317) | 3e-95 | Click |
| 18 | 64523..64885 | PROPHAGE_Shewan_MR-1: ISSod6, transposase; SSON_P068; phage(gi24374783) | 1e-11 | Click |
| 19 | complement(65173..66087) | IS1294 orf; SSON_P069 | N/A | Click |
| 20 | complement(66068..66340) | hypothetical protein; SSON_P070 | N/A | Click |
| 21 | complement(66360..66947) | PHAGE_Entero_4795: hypothetical protein PBV4795_ORF79; SSON_P071; phage(gi157166064) | 6e-12 | Click |
| 22 | 67363..68817 | OspC3; SSON_P072 | N/A | Click |
| 23 | 69155..69457 | PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_P073; phage(gi21231087) | 6e-10 | Click |
| 24 | 69598..70311 | PROPHAGE_Escher_CFT073: transposase insF; SSON_P074; phage(gi26249410) | 3e-128 | Click |
| 25 | 70436..70678 | PROPHAGE_Escher_MG1655: IS150 transposase B; SSON_P075; phage(gi16131429) | 9e-11 | Click |
| 26 | 70733..71155 | PROPHAGE_Ralsto_GMI1000: isrso11-transposase orfb protein; SSON_P076; phage(gi17546155) | 3e-25 | Click |
| 27 | 71276..71611 | IS21 ORF1; SSON_P077 | N/A | Click |
| 28 | 71581..71874 | PROPHAGE_Escher_EDL933: putative transposase; SSON_P078; phage(gi15803516) | 5e-19 | Click |
| 29 | complement(72065..72970) | PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SSON_P079; phage(gi16130763) | 6e-179 | Click |
| 30 | complement(72928..73293) | PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SSON_P080; phage(gi17546153) | 1e-45 | Click |
| 31 | complement(73542..74738) | PROPHAGE_Escher_CFT073: transposase; SSON_P081; phage(gi26248352) | 0.0 | Click |
| 32 | complement(74930..75934) | PROPHAGE_Escher_CFT073: transposase; SSON_P082; phage(gi26248360) | 0.0 | Click |
Region 2, total : 19 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(116887..117219) | PROPHAGE_Escher_CFT073: transposase; SSON_P128; phage(gi26249432) | 2e-30 | Click |
| 2 | 117401..117727 | PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SSON_P129; phage(gi157166066) | 1e-55 | Click |
| 3 | 117727..118179 | PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SSON_P130; phage(gi157166067) | 1e-78 | Click |
| 4 | 118277..119425 | PROPHAGE_Escher_CFT073: transposase; SSON_P131; phage(gi26248360) | 3e-34 | Click |
| 5 | 119425..120222 | PROPHAGE_Escher_CFT073: transposase/IS protein; SSON_P132; phage(gi26248359) | 5e-57 | Click |
| 6 | 120320..120748 | PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SSON_P133; phage(gi157166067) | 1e-78 | Click |
| 7 | complement(120751..120978) | PROPHAGE_Escher_CFT073: transposase; SSON_P134; phage(gi26249432) | 5e-20 | Click |
| 8 | complement(121226..121582) | IS91 orf; SSON_P135 | N/A | Click |
| 9 | complement(121582..122004) | putative IS91 ORF2; SSON_P136 | N/A | Click |
| 10 | complement(122667..122906) | putative reverse transcriptase, fragment; SSON_P137 | N/A | Click |
| 11 | complement(122938..123138) | putative reverse transcriptase, fragment; SSON_P138 | N/A | Click |
| 12 | complement(123053..123295) | PROPHAGE_Escher_MG1655: IS3 transposase B; SSON_P139; phage(gi16128284) | 7e-27 | Click |
| 13 | complement(123268..123831) | PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SSON_P140; phage(gi157166067) | 4e-61 | Click |
| 14 | complement(123938..124156) | PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SSON_P141; phage(gi157166066) | 7e-29 | Click |
| 15 | complement(124335..125537) | VirA; SSON_P142 | N/A | Click |
| 16 | 126066..129374 | PHAGE_Vibrio_VP5: major tail subunit; SSON_P143; phage(gi48696686) | 2e-14 | Click |
| 17 | 129560..129817 | adhesion protein, fragment; SSON_P144 | N/A | Click |
| 18 | 130009..130335 | PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SSON_P145; phage(gi157166066) | 1e-58 | Click |
| 19 | 130607..131212 | PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SSON_P146; phage(gi157166067) | 8e-112 | Click |
Region 3, total : 23 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(134538..135665) | PHAGE_Vibrio_VHML: ORF37; SSON_P151; phage(gi27311204) | 4e-06 | Click |
| 2 | complement(135678..135878) | PHAGE_Entero_Sf6: putative transposase OrfB; SSON_P152; phage(gi41057343) | 1e-10 | Click |
| 3 | complement(136020..136925) | PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SSON_P153; phage(gi16130763) | 6e-179 | Click |
| 4 | complement(136883..137248) | PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SSON_P154; phage(gi17546153) | 1e-45 | Click |
| 5 | complement(137447..137665) | PROPHAGE_Escher_CFT073: transposase insC; SSON_P155; phage(gi26250372) | 1e-10 | Click |
| 6 | complement(137720..138358) | hypothetical protein; SSON_P156 | N/A | Click |
| 7 | 139323..139556 | PROPHAGE_Escher_CFT073: transposase/IS protein; SSON_P157; phage(gi26248359) | 2e-29 | Click |
| 8 | complement(139608..139898) | hypothetical protein; SSON_P158 | N/A | Click |
| 9 | complement(139867..140118) | sugar phosphate transport protein-like protein; SSON_P159 | N/A | Click |
| 10 | 140818..141321 | PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_P160; phage(gi16131317) | 3e-95 | Click |
| 11 | 141439..141912 | PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; SSON_P161; phage(gi26989833) | 2e-11 | Click |
| 12 | complement(141951..142748) | PROPHAGE_Escher_CFT073: transposase/IS protein; SSON_P162; phage(gi26248359) | 1e-56 | Click |
| 13 | complement(142748..143674) | PROPHAGE_Escher_CFT073: transposase; SSON_P163; phage(gi26248360) | 9e-26 | Click |
| 14 | 143931..144233 | PHAGE_Entero_Sf6: gene 56 protein; SSON_P164; phage(gi41057344) | 3e-09 | Click |
| 15 | 144374..145087 | PROPHAGE_Escher_CFT073: transposase insF; SSON_P165; phage(gi26249410) | 2e-135 | Click |
| 16 | 145341..145595 | PROPHAGE_Pseudo_KT2440: ISPpu15, transposase Orf2; SSON_P166; phage(gi26990787) | 7e-13 | Click |
| 17 | 146464..148101 | PHAGE_Ostreo_OlV1: hypothetical protein; SSON_P167; phage(gi313843974) | 1e-06 | Click |
| 18 | 148309..148578 | hypothetical protein; SSON_P168 | N/A | Click |
| 19 | 148652..148801 | hypothetical protein; SSON_P169 | N/A | Click |
| 20 | 148830..149420 | PHAGE_Entero_cdtI: hypothetical protein PcdtI_gp23; SSON_P170; phage(gi148609405) | 7e-08 | Click |
| 21 | complement(149488..149667) | plasmid mobilization protein; SSON_P171 | N/A | Click |
| 22 | 149825..150067 | putative IS orf; SSON_P172 | N/A | Click |
| 23 | 150124..151452 | PROPHAGE_Escher_MG1655: IS4 transposase; SSON_P173; phage(gi16132099) | 0.0 | Click |