Definition Shigella sonnei Ss046 chromosome, complete genome.
Accession NC_007384
Length 4,825,265
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 6 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 12939..14855  PHAGE_Bathyc_BpV1: hypothetical protein; SSON_0014; phage(gi313768007)  2e-154  Click
2 14944..16074  PHAGE_Cafete_BV_PW1: putative DnaJ/Hsp40; SSON_0015; phage(gi310831116)  7e-47  Click
3 complement(16178..16387)  PHAGE_Stx2_c_II: putative host killer protein; SSON_0016; phage(gi302393105)  3e-22  Click
4 complement(17028..17855)  PROPHAGE_Shewan_MR-1: IS110 family transposase; SSON_0017; phage(gi24375433)  6e-10  Click
5 17921..19093  PROPHAGE_Escher_CFT073: transposase; SSON_0018; phage(gi26248360)  1e-34  Click
6 19093..19890  PHAGE_Bacill_phIS3501: phage replication protein DnaC; SSON_0019; phage(gi422934308)  4e-08  Click
Region 2, total : 25 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 760456..760758  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_0718; phage(gi21231087)  1e-09  Click
2 760899..761612  PROPHAGE_Escher_CFT073: transposase insF; SSON_0719; phage(gi26249410)  8e-136  Click
3 complement(762001..762288)  hypothetical protein; SSON_0720  N/A  Click
4 complement(762921..763607)  hypothetical protein; SSON_0721  N/A  Click
5 complement(763755..764111)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip073; SSON_0722; phage(gi20065868)  2e-08  Click
6 complement(764606..765352)  PHAGE_Gifsy_2: bacteriophage DNA replication protein; SSON_0723; phage(gi169257280)  1e-79  Click
7 766100..766402  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_0725; phage(gi21231087)  1e-09  Click
8 766543..767256  PROPHAGE_Escher_CFT073: transposase insF; SSON_0726; phage(gi26249410)  8e-136  Click
9 complement(767484..767789)  PHAGE_Pectob_ZF40: putative cII repressor; SSON_0727; phage(gi422936652)  2e-05  Click
10 768804..768959  PHAGE_Salico_CGphi29: hypothetical protein; SSON_0728; phage(gi472340166)  2e-09  Click
11 769036..769338  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_0729; phage(gi21231087)  1e-09  Click
12 complement(769686..770525)  PHAGE_Entero_Sf6: putative transposase OrfB; SSON_0730; phage(gi41057343)  8e-170  Click
13 complement(771491..772687)  PROPHAGE_Escher_CFT073: transposase; SSON_0731; phage(gi26248352)  0.0  Click
14 complement(773134..774039)  PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SSON_0732; phage(gi16130763)  6e-179  Click
15 774476..774973  PHAGE_Stx2_c_1717: phage-related lysozyme; SSON_0733; phage(gi209447172)  3e-90  Click
16 774970..775440  PHAGE_Entero_HK620: endopeptidase; SSON_0734; phage(gi13559860)  4e-77  Click
17 776236..777000  PHAGE_Escher_TL_2011c: putative terminase small subunit; SSON_0735; phage(gi418487072)  2e-16  Click
18 776933..778354  PHAGE_Psychr_pOW20_A: phage terminase large subunit; SSON_0736; phage(gi472339822)  1e-157  Click
19 778738..779820  PHAGE_Pectob_ZF40: putative portal protein; SSON_0737; phage(gi422936682)  8e-30  Click
20 780458..781678  PHAGE_Pectob_ZF40: putative head protein; SSON_0738; phage(gi422936684)  4e-19  Click
21 781682..782188  putative bacteriophage protein; SSON_0739  N/A  Click
22 782453..782956  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_0740; phage(gi16131317)  3e-95  Click
23 783379..784374  6-phosphogluconolactonase; SSON_0741  N/A  Click
24 complement(784415..785431)  PHAGE_Burkho_phi1026b: gp58; SSON_0742; phage(gi38707948)  4e-07  Click
25 complement(785584..786087)  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_0743; phage(gi16131317)  1e-94  Click
Region 3, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 788687..788705  attL    GTAGGCCGGATAAGGCGTT  N/A  Click
2 complement(790155..790967)  PHAGE_Entero_HK106: integrase; SSON_0746; phage(gi428783305)  9e-147  Click
3 complement(790995..791708)  PROPHAGE_Escher_CFT073: transposase insF; SSON_0747; phage(gi26249410)  8e-136  Click
4 complement(791849..792151)  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_0748; phage(gi21231087)  1e-09  Click
5 792167..793420  PHAGE_Entero_phiP27: putative tail fiber protein; SSON_0749; phage(gi18249920)  5e-82  Click
6 793371..793994  PHAGE_Entero_phiP27: hypothetical protein P27p57; SSON_0750; phage(gi18249921)  5e-80  Click
7 complement(794174..795937)  PHAGE_Gifsy_1: leucine-rich repeat protein; SSON_0751; phage(gi169257209)  3e-10  Click
8 complement(796519..796995)  putative kinase inhibitor protein; SSON_0752  N/A  Click
9 complement(797054..798343)  PHAGE_Mycoba_Myrna: gp183; SSON_0753; phage(gi203454746)  9e-07  Click
10 804734..804752  attR    GTAGGCCGGATAAGGCGTT  N/A  Click
Region 4, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 922455..922472  attL    AATGGTGTAGTTAATTTT  N/A  Click
2 922493..923731  PHAGE_Salmon_vB_SosS_Oslo: integrase; SSON_0868; phage(gi399528791)  8e-50  Click
3 924285..924788  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_0869; phage(gi16131317)  3e-95  Click
4 925138..925953  hypothetical protein; SSON_0870  N/A  Click
5 926496..926795  hypothetical protein; SSON_0871  N/A  Click
6 926792..928279  PHAGE_Entero_P4: DNA primase; SSON_0872; phage(gi9627512)  9e-102  Click
7 928381..928683  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_0873; phage(gi21231087)  1e-09  Click
8 928824..929537  PROPHAGE_Escher_CFT073: transposase insF; SSON_0874; phage(gi26249410)  8e-136  Click
9 930165..930410  hypothetical protein; SSON_0875  N/A  Click
10 930407..930829  PHAGE_Pseudo_F116: single-stranded DNA-binding protein; SSON_0876; phage(gi56692915)  5e-10  Click
11 931489..932634  PHAGE_Gifsy_2: bacteriophage Clp protease involved in capsid processing; SSON_0877; phage(gi169257302)  2e-87  Click
12 932598..933356  PHAGE_Entero_mEp213: head maturation protease; SSON_0878; phage(gi428782594)  7e-76  Click
13 933615..933860  hypothetical protein; SSON_0879  N/A  Click
14 933947..935119  PROPHAGE_Escher_CFT073: transposase; SSON_0880; phage(gi26248360)  1e-34  Click
15 935119..935916  PROPHAGE_Escher_CFT073: transposase/IS protein; SSON_0881; phage(gi26248359)  5e-57  Click
16 936482..936499  attR    AATGGTGTAGTTAATTTT  N/A  Click
17 936670..936990  PHAGE_Cronob_vB_CsaM_GAP32: ATP-dependent Clp protease; SSON_0882; phage(gi414087232)  2e-05  Click
18 937021..939297  PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; SSON_0883; phage(gi15800640)  0.0  Click
Region 5, total : 17 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1263611..1265347)  PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; SSON_1183; phage(gi163932195)  2e-05  Click
2 complement(1265442..1266356)  L,D-carboxypeptidase A; SSON_1185  N/A  Click
3 1266342..1267067  PHAGE_Entero_PRD1: transglycosylase; SSON_1184; phage(gi9626369)  6e-06  Click
4 complement(1267069..1267803)  hypothetical protein; SSON_1186  N/A  Click
5 1267971..1268225  transglycosylase associated protein; SSON_1187  N/A  Click
6 1268277..1268579  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1188; phage(gi21231087)  1e-09  Click
7 1268720..1269433  PROPHAGE_Escher_CFT073: transposase insF; SSON_1189; phage(gi26249410)  8e-136  Click
8 complement(1270168..1270881)  PROPHAGE_Escher_CFT073: transposase insF; SSON_1191; phage(gi26249410)  8e-136  Click
9 complement(1271022..1271324)  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1192; phage(gi21231087)  1e-09  Click
10 1271890..1273464  PHAGE_Prochl_P_RSM4: YadA domain-containing structural protein; SSON_1193; phage(gi326782844)  8e-05  Click
11 1273629..1274348  PHAGE_Bacill_BCP78: putative RNA polymerase sigma 28 subunit SigF; SSON_1194; phage(gi410492877)  3e-11  Click
12 1274968..1275471  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_1196; phage(gi16131317)  1e-94  Click
13 1275810..1276610  PHAGE_Cafete_BV_PW1: putative ABC-type amino acid transporter; SSON_1197; phage(gi310831221)  3e-05  Click
14 complement(1276664..1277695)  PROPHAGE_Escher_EDL933: putative transposase; SSON_1198; phage(gi15803522)  6e-146  Click
15 1277870..1278856  D-cysteine desulfhydrase; SSON_1199  N/A  Click
16 1278871..1279539  putative transport system permease; SSON_1200  N/A  Click
17 1279536..1280288  PHAGE_Plankt_PaV_LD: ABC transporter; SSON_1201; phage(gi371496158)  4e-34  Click
Region 6, total : 19 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1334146..1334448  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1255; phage(gi21231087)  1e-09  Click
2 1334589..1335302  PROPHAGE_Escher_CFT073: transposase insF; SSON_1256; phage(gi26249410)  8e-136  Click
3 complement(1335299..1335487)  PHAGE_Entero_2008: hypothetical protein YYZ_gp42; SSON_1257; phage(gi209427766)  1e-18  Click
4 complement(1336980..1337056)  tRNA  N/A  Click
5 complement(1337157..1337232)  tRNA  N/A  Click
6 complement(1337335..1338189)  PHAGE_Entero_HK225: late gene regulator Q; SSON_1260; phage(gi428782441)  5e-89  Click
7 complement(1338186..1338560)  PHAGE_Escher_HK75: RusA-like protein; SSON_1261; phage(gi356870726)  5e-36  Click
8 complement(1338560..1338817)  PHAGE_Entero_phiP27: hypothetical protein P27p20; SSON_1262; phage(gi18249884)  4e-37  Click
9 complement(1339152..1339949)  PROPHAGE_Escher_CFT073: transposase/IS protein; SSON_1263; phage(gi26248359)  5e-57  Click
10 complement(1339949..1341121)  PROPHAGE_Escher_CFT073: transposase; SSON_1264; phage(gi26248360)  1e-34  Click
11 1341140..1341412  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SSON_1265; phage(gi17546153)  4e-32  Click
12 1341370..1342275  PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SSON_1266; phage(gi16130763)  6e-179  Click
13 1342392..1342694  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1267; phage(gi21231087)  1e-09  Click
14 complement(1342857..1343360)  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_1268; phage(gi16131317)  3e-95  Click
15 1343612..1344325  PROPHAGE_Escher_CFT073: transposase insF; SSON_1269; phage(gi26249410)  8e-136  Click
16 1344353..1345306  PHAGE_Entero_phiP27: putative tail fiber protein; SSON_1270; phage(gi18249920)  9e-40  Click
17 1345257..1345880  PHAGE_Entero_phiP27: hypothetical protein P27p57; SSON_1271; phage(gi18249921)  5e-79  Click
18 complement(1346060..1347811)  PHAGE_Acanth_mimivirus: putative leucine-rich repeat protein; SSON_1272; phage(gi311977765)  3e-07  Click
19 complement(1348412..1348660)  PHAGE_Entero_mEp460: DinI-like protein; SSON_1273; phage(gi428782337)  1e-41  Click
20 complement(1349015..1349581)  hypothetical protein; SSON_1274  N/A  Click
21 1349891..1351663  PHAGE_Acanth_moumouvirus: asparaginyl t-RNA synthetase; SSON_1275; phage(gi441432571)  3e-07  Click
Region 7, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1367433..1367510  attL    GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTG  N/A  Click
2 complement(1381516..1382178)  PHAGE_Cronob_vB_CsaM_GAP32: putative DNA polymerase III epsilon subunit; SSON_1304; phage(gi414087193)  4e-17  Click
3 complement(1382202..1382858)  hypothetical protein; SSON_1305  N/A  Click
4 complement(1382960..1383190)  PHAGE_Pectob_ZF40: putative DNA polymerase; SSON_1306; phage(gi422936677)  6e-17  Click
5 1383329..1383703  hypothetical protein; SSON_1307  N/A  Click
6 1383707..1384579  putative resistance protein; SSON_1308  N/A  Click
7 1384592..1384933  PHAGE_Entero_PsP3: gp28; SSON_1309; phage(gi41057381)  6e-09  Click
8 complement(1385326..1386402)  PHAGE_Entero_mEp235: integrase; SSON_1310; phage(gi428781836)  1e-70  Click
9 complement(1386439..1386684)  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_1311; phage(gi16131317)  9e-43  Click
10 complement(1386695..1387555)  PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SSON_1312; phage(gi16130763)  3e-166  Click
11 complement(1387513..1387878)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SSON_1313; phage(gi17546153)  1e-45  Click
12 complement(1387967..1388233)  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_1314; phage(gi16131317)  8e-47  Click
13 1388861..1389163  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1315; phage(gi21231087)  1e-09  Click
14 1389304..1390017  PROPHAGE_Escher_CFT073: transposase insF; SSON_1316; phage(gi26249410)  8e-136  Click
15 complement(1390133..1391848)  PHAGE_Ostreo_OlV1: hypothetical protein; SSON_1317; phage(gi313843974)  1e-07  Click
16 complement(1392050..1392763)  PROPHAGE_Escher_CFT073: transposase insF; SSON_1318; phage(gi26249410)  3e-136  Click
17 complement(1392904..1393206)  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1319; phage(gi21231087)  1e-09  Click
18 complement(1394044..1394547)  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_1320; phage(gi16131317)  3e-95  Click
19 1395159..1395461  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1322; phage(gi21231087)  1e-09  Click
20 1395602..1396315  PROPHAGE_Escher_CFT073: transposase insF; SSON_1323; phage(gi26249410)  2e-135  Click
21 complement(1396558..1396833)  hypothetical protein; SSON_1324  N/A  Click
22 1397015..1397092  attR    GGTGATGCTGCCAACTTACTGATTTAGTGTATGATGGTGTTTTTGAGGTGCTCCAGTGGCTTCTGTTTCTATCAGCTG  N/A  Click
23 1397264..1397767  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_1325; phage(gi16131317)  1e-94  Click
Region 8, total : 32 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1858162..1858989  PHAGE_Plankt_PaV_LD: ABC transporter; SSON_1751; phage(gi371496158)  5e-13  Click
2 1858986..1859843  iron transport protein inner membrane component; SSON_1752  N/A  Click
3 1859840..1860697  Iron transport protein inner membrane component; SSON_1753  N/A  Click
4 complement(1860898..1861521)  PHAGE_Entero_phiP27: hypothetical protein P27p57; SSON_1754; phage(gi18249921)  3e-84  Click
5 complement(1862186..1862899)  PROPHAGE_Escher_CFT073: transposase insF; SSON_1755; phage(gi26249410)  8e-136  Click
6 complement(1863040..1863342)  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1756; phage(gi21231087)  3e-07  Click
7 complement(1863219..1863935)  PROPHAGE_Escher_CFT073: transposase; SSON_1757; phage(gi26248360)  2e-15  Click
8 1864057..1864359  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1758; phage(gi21231087)  1e-09  Click
9 1864500..1865213  PROPHAGE_Escher_CFT073: transposase insF; SSON_1759; phage(gi26249410)  2e-135  Click
10 complement(1865254..1865583)  PROPHAGE_Escher_CFT073: transposase; SSON_1760; phage(gi26248360)  1e-06  Click
11 complement(1866060..1866659)  PHAGE_Entero_mEp460: Lom protein; SSON_1762; phage(gi428782335)  1e-104  Click
12 complement(1866727..1870206)  PHAGE_Entero_mEp460: host specificity protein; SSON_1763; phage(gi428782334)  0.0  Click
13 complement(1870267..1870809)  PHAGE_Entero_mEp460: tail assembly protein; SSON_1764; phage(gi428782333)  1e-80  Click
14 complement(1870806..1871549)  PHAGE_Entero_mEp460: tail fiber component; SSON_1765; phage(gi428782332)  4e-138  Click
15 complement(1871554..1872252)  PHAGE_Entero_mEp460: minor tail protein; SSON_1766; phage(gi428782331)  3e-128  Click
16 complement(1872262..1872591)  PHAGE_Entero_mEp460: minor tail protein; SSON_1767; phage(gi428782330)  1e-58  Click
17 complement(1872591..1872956)  PHAGE_Entero_mEp460: tail length tape measure protein; SSON_1768; phage(gi428782329)  3e-58  Click
18 1872995..1873297  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1769; phage(gi21231087)  1e-09  Click
19 1873474..1873776  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1770; phage(gi21231087)  1e-09  Click
20 1873812..1874237  PROPHAGE_Escher_CFT073: transposase insF; SSON_1771; phage(gi26249410)  4e-73  Click
21 1874227..1874451  PROPHAGE_Escher_CFT073: transposase insF; SSON_1772; phage(gi26249410)  1e-38  Click
22 complement(1874677..1874751)  tRNA  N/A  Click
23 complement(1874755..1874830)  tRNA  N/A  Click
24 complement(1874833..1874909)  tRNA  N/A  Click
25 complement(1874911..1874987)  tRNA  N/A  Click
26 complement(1875728..1876018)  PHAGE_Erwini_phiEt88: hypothetical protein; SSON_1777; phage(gi327198620)  5e-33  Click
27 complement(1876018..1876617)  PHAGE_Entero_mEp237: hypothetical protein; SSON_1778; phage(gi435439315)  5e-53  Click
28 1877202..1877705  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_1779; phage(gi16131317)  3e-95  Click
29 complement(1878423..1878788)  PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp44; SSON_1780; phage(gi116222036)  1e-30  Click
30 complement(1878788..1879453)  hypothetical protein; SSON_1781  N/A  Click
31 complement(1879817..1880035)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip090; SSON_1782; phage(gi20065885)  1e-32  Click
32 1880718..1881221  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_1783; phage(gi16131317)  9e-96  Click
33 1881440..1881742  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1784; phage(gi21231087)  1e-09  Click
34 1881883..1882596  PROPHAGE_Escher_CFT073: transposase insF; SSON_1785; phage(gi26249410)  8e-136  Click
35 1883182..1884117  PHAGE_Parame_FR483: hypothetical protein FR483_N404R; SSON_1787; phage(gi155370502)  3e-08  Click
36 complement(1884246..1885619)  PHAGE_Cafete_BV_PW1: putative superfamily II helicase/eIF-4AIII; SSON_1788; phage(gi310831360)  2e-46  Click
Region 9, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1983467..1983970  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_1884; phage(gi16131317)  3e-95  Click
2 1984562..1985119  PHAGE_Entero_mEp460: regulatory protein Rha; SSON_1885; phage(gi428782357)  1e-23  Click
3 1985869..1986525  prophage protein; SSON_1886  N/A  Click
4 1987134..1987745  PHAGE_Escher_D108: tail fiber fragment; SSON_1887; phage(gi281199697)  6e-43  Click
5 1987898..1988431  PHAGE_Escher_D108: tail fiber assembly protein; SSON_1888; phage(gi281199696)  6e-86  Click
6 complement(1988460..1988987)  PHAGE_Escher_D108: probable tail fiber assembly protein; SSON_1889; phage(gi281199695)  8e-82  Click
7 1989342..1989644  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1890; phage(gi21231087)  1e-09  Click
8 1989785..1990498  PROPHAGE_Escher_CFT073: transposase insF; SSON_1891; phage(gi26249410)  2e-135  Click
9 complement(1990932..1991246)  PHAGE_Entero_mEp460: hypothetical protein; SSON_1892; phage(gi428782371)  1e-53  Click
10 complement(1991617..1993470)  PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp03; SSON_1893; phage(gi116221995)  0.0  Click
11 1994069..1994371  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1894; phage(gi21231087)  1e-09  Click
12 1994512..1995225  PROPHAGE_Escher_CFT073: transposase insF; SSON_1895; phage(gi26249410)  3e-136  Click
13 complement(1995713..1995789)  tRNA  N/A  Click
14 complement(1995803..1995879)  tRNA  N/A  Click
15 complement(1995887..1995962)  tRNA  N/A  Click
16 complement(1996003..1997061)  PHAGE_Entero_mEp460: DNA methylase; SSON_1899; phage(gi428782369)  7e-175  Click
17 complement(1997212..1997409)  PHAGE_Entero_mEp460: hypothetical protein; SSON_1900; phage(gi428782368)  3e-08  Click
18 complement(1997634..1998455)  PHAGE_Entero_HK225: late gene regulator Q; SSON_1901; phage(gi428782441)  6e-90  Click
19 complement(1998452..1998832)  PHAGE_Escher_HK75: RusA-like protein; SSON_1902; phage(gi356870726)  1e-35  Click
20 complement(1998833..1999891)  PHAGE_Entero_mEp460: hypothetical protein; SSON_1903; phage(gi428782365)  1e-89  Click
21 complement(2000469..2000624)  PHAGE_Stx2_c_II: putative host killer protein; SSON_1904; phage(gi302393105)  3e-19  Click
22 complement(2001435..2001665)  PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; SSON_1905; phage(gi399498823)  2e-14  Click
23 complement(2001677..2002390)  PROPHAGE_Escher_CFT073: transposase insF; SSON_1906; phage(gi26249410)  8e-136  Click
24 complement(2002531..2002833)  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_1907; phage(gi21231087)  1e-09  Click
25 2003609..2004112  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_1908; phage(gi16131317)  9e-96  Click
26 2004171..2004383  prophage protein; SSON_1909  N/A  Click
Region 10, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2270880..2270891  attL    AACAATGGCGAC  N/A  Click
2 complement(2276291..2277976)  PHAGE_Entero_2008: putative 2-component sensor protein YehU; SSON_2172; phage(gi209427798)  0.0  Click
3 2278491..2278739  PHAGE_Entero_2008: putative DNA damage-inducible protein; SSON_2173; phage(gi209427797)  3e-40  Click
4 complement(2278750..2279253)  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_2174; phage(gi16131317)  3e-95  Click
5 complement(2279897..2280259)  PROPHAGE_Shewan_MR-1: IS110 family transposase; SSON_2175; phage(gi24375433)  2e-05  Click
6 complement(2280259..2281023)  putative transposase; SSON_2176  N/A  Click
7 complement(2281150..2281419)  PHAGE_Entero_HK630: tail fiber assembly protein; SSON_2177; phage(gi428782810)  8e-22  Click
8 2281713..2282144  hypothetical protein; SSON_2178  N/A  Click
9 2282460..2284103  PHAGE_Ostreo_OlV1: hypothetical protein; SSON_2179; phage(gi313843974)  1e-06  Click
10 complement(2284283..2284906)  PHAGE_Entero_phiP27: hypothetical protein P27p57; SSON_2180; phage(gi18249921)  1e-79  Click
11 2285620..2285922  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_2181; phage(gi21231087)  1e-09  Click
12 2285926..2285937  attR    AACAATGGCGAC  N/A  Click
13 2286063..2287766  PHAGE_Entero_2008: putative integrase; SSON_2182; phage(gi209427727)  6e-177  Click
Region 11, total : 43 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2536951..2537030  attL    ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC  N/A  Click
2 2540622..2541779  PROPHAGE_Escher_MG1655: CPS-53 (KpLE1) prophage; predicted prophage CPS-53 integrase; SSON_2406; phage(gi16130281)  0.0  Click
3 2542088..2542441  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SSON_2407; phage(gi24111655)  3e-42  Click
4 complement(2543256..2543759)  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_2408; phage(gi16131317)  3e-95  Click
5 complement(2545274..2548363)  PROPHAGE_Escher_MG1655: Qin prophage; predicted side tail fibre assembly protein; SSON_2410; phage(gi16129506)  6e-160  Click
6 complement(2548456..2548938)  PHAGE_Entero_cdtI: putative Lom-like outer membrane protein; SSON_2411; phage(gi148609401)  2e-88  Click
7 complement(2549009..2552506)  PHAGE_Entero_HK629: tail fiber; SSON_2412; phage(gi428782032)  0.0  Click
8 complement(2552567..2553199)  PHAGE_Entero_HK629: tail component protein; SSON_2413; phage(gi428782031)  2e-112  Click
9 complement(2553136..2553879)  PHAGE_Entero_mEp460: tail fiber component; SSON_2414; phage(gi428782332)  8e-152  Click
10 complement(2553885..2554583)  PHAGE_Entero_HK629: minor tail protein; SSON_2415; phage(gi428782029)  3e-133  Click
11 complement(2554583..2554912)  PHAGE_Entero_HK629: minor tail protein; SSON_2416; phage(gi428782028)  1e-58  Click
12 complement(2554909..2557470)  PHAGE_Entero_HK629: tail length tape measure protein; SSON_2417; phage(gi428782027)  0.0  Click
13 complement(2557463..2557897)  PHAGE_Entero_HK629: tail assembly protein; SSON_2418; phage(gi428782026)  4e-81  Click
14 complement(2557879..2558301)  PHAGE_Entero_HK629: minor tail protein; SSON_2419; phage(gi428782025)  2e-73  Click
15 complement(2558317..2559057)  PHAGE_Entero_HK629: major tail protein; SSON_2420; phage(gi428782024)  5e-136  Click
16 complement(2559065..2559460)  PHAGE_Entero_HK629: minor tail protein; SSON_2421; phage(gi428782023)  5e-70  Click
17 complement(2559457..2560035)  PHAGE_Entero_HK629: minor tail protein; SSON_2422; phage(gi428782022)  4e-101  Click
18 complement(2560047..2560400)  PHAGE_Entero_HK629: head-tail connector Fii; SSON_2423; phage(gi428782021)  9e-64  Click
19 complement(2560412..2560810)  PHAGE_Entero_HK629: DNA packaging protein Fi; SSON_2424; phage(gi428782020)  2e-63  Click
20 complement(2560852..2561877)  PHAGE_Entero_HK629: major head subunit; SSON_2425; phage(gi428782019)  0.0  Click
21 complement(2561933..2562265)  PHAGE_Entero_HK629: head decoration protein; SSON_2426; phage(gi428782018)  5e-57  Click
22 complement(2562275..2563555)  PHAGE_Entero_HK629: head maturation protease; SSON_2427; phage(gi428782016)  0.0  Click
23 complement(2563575..2565176)  PHAGE_Entero_HK629: portal protein; SSON_2428; phage(gi428782015)  0.0  Click
24 complement(2565173..2565379)  PHAGE_Entero_HK629: head-tail connector; SSON_2429; phage(gi428782014)  4e-32  Click
25 complement(2565376..2567301)  PHAGE_Entero_HK629: terminase large subunit A; SSON_2430; phage(gi428782013)  0.0  Click
26 complement(2567276..2567821)  PHAGE_Entero_HK629: terminase small subunit nu1; SSON_2431; phage(gi428782012)  4e-97  Click
27 2568486..2568911  PHAGE_Entero_HK629: putative envelope protein; SSON_2432; phage(gi428782079)  5e-56  Click
28 complement(2569091..2569996)  PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SSON_2433; phage(gi16130763)  6e-179  Click
29 complement(2569954..2570319)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SSON_2434; phage(gi17546153)  1e-45  Click
30 complement(2570836..2571093)  PHAGE_Stx2_c_1717: hypothetical protein Stx2-1717_gp50; SSON_2435; phage(gi209447175)  9e-43  Click
31 complement(2571789..2572247)  PHAGE_Entero_mEp235: lysis protein Rz; SSON_2436; phage(gi428781868)  3e-75  Click
32 complement(2572244..2572741)  PHAGE_Stx2_c_1717: phage-related lysozyme; SSON_2437; phage(gi209447172)  5e-88  Click
33 complement(2572741..2572956)  PHAGE_Stx2_c_II: holin; SSON_2438; phage(gi302393164)  5e-28  Click
34 2573396..2573899  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_2439; phage(gi16131317)  3e-95  Click
35 2574305..2575387  outer membrane porin protein C; SSON_2440  N/A  Click
36 complement(2575576..2575959)  PHAGE_Entero_2008: antitermination protein Q; SSON_2441; phage(gi209427762)  5e-56  Click
37 complement(2576045..2576182)  PHAGE_Entero_mEp237: hypothetical protein; SSON_2442; phage(gi435439319)  1e-09  Click
38 complement(2576182..2576544)  PHAGE_Entero_mEp237: Holliday junction resolvase RusA; SSON_2443; phage(gi435439318)  1e-61  Click
39 complement(2576541..2576831)  PHAGE_Entero_mEp237: hypothetical protein; SSON_2444; phage(gi435439317)  6e-50  Click
40 complement(2576824..2576994)  PHAGE_Escher_HK639: NinE; SSON_2445; phage(gi356870663)  5e-14  Click
41 complement(2576994..2577449)  PHAGE_Cronob_phiES15: hypothetical protein; SSON_2446; phage(gi401817579)  2e-60  Click
42 2578955..2580115  PROPHAGE_Escher_CFT073: transposase; SSON_2447; phage(gi26248360)  1e-35  Click
43 2580128..2580925  PROPHAGE_Escher_CFT073: transposase/IS protein; SSON_2448; phage(gi26248359)  5e-57  Click
44 2581007..2581510  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_2449; phage(gi16131317)  1e-94  Click
45 2585784..2585863  attR    ACAGCTGATAGAAACAGAAGCCACTGGAGCACCTCAAAAACACCATCATACACTAAATCAGTAAGTTGGCAGCATCACCC  N/A  Click
Region 12, total : 10 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2804968..2806794  PHAGE_Acanth_mimivirus: putative leucine-rich repeat protein; SSON_2646; phage(gi311977765)  4e-09  Click
2 complement(2806974..2807597)  PHAGE_Entero_phiP27: hypothetical protein P27p57; SSON_2647; phage(gi18249921)  1e-79  Click
3 complement(2807548..2808714)  PHAGE_Stx2_c_1717: putative tail fiber protein; SSON_2648; phage(gi209447198)  2e-16  Click
4 complement(2808774..2809232)  PHAGE_Stx2_c_1717: transposase; SSON_2649; phage(gi209447153)  2e-70  Click
5 complement(2809282..2809629)  PHAGE_Stx2_c_1717: transposase; SSON_2650; phage(gi209447152)  4e-61  Click
6 complement(2809868..2810581)  PROPHAGE_Escher_CFT073: transposase insF; SSON_2651; phage(gi26249410)  5e-135  Click
7 complement(2810722..2811024)  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_2652; phage(gi21231087)  1e-09  Click
8 complement(2811621..2812748)  PROPHAGE_Shewan_MR-1: IS110 family transposase; SSON_2653; phage(gi24375433)  9e-10  Click
9 complement(2813123..2813770)  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SSON_2654; phage(gi157166067)  2e-120  Click
10 complement(2813990..2814331)  PHAGE_Stx2_c_1717: putative transposase; SSON_2655; phage(gi209447180)  1e-54  Click
Region 13, total : 73 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2877856..2880429)  PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; SSON_2718; phage(gi15800640)  7e-76  Click
2 complement(2880559..2881290)  hypothetical protein; SSON_2719  N/A  Click
3 complement(2881287..2882267)  23S rRNA pseudouridine synthase D; SSON_2720  N/A  Click
4 2882402..2883139  outer membrane protein assembly complex subunit YfiO; SSON_2721  N/A  Click
5 2883243..2884589  PROPHAGE_Escher_MG1655: IS4 transposase; SSON_2722; phage(gi16132099)  0.0  Click
6 2884693..2885055  PHAGE_Entero_phiP27: putative prohead protease; SSON_2723; phage(gi18249903)  4e-60  Click
7 2885117..2885419  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_2724; phage(gi21231087)  1e-09  Click
8 2885560..2886273  PROPHAGE_Escher_CFT073: transposase insF; SSON_2725; phage(gi26249410)  5e-135  Click
9 2886336..2887832  PHAGE_Entero_phiP27: putative sheath protein; SSON_2726; phage(gi18249908)  0.0  Click
10 2887832..2888188  PHAGE_Entero_phiP27: hypothetical protein P27p45; SSON_2727; phage(gi18249909)  3e-65  Click
11 2888188..2888523  PHAGE_Entero_phiP27: hypothetical protein P27p46; SSON_2728; phage(gi18249910)  6e-55  Click
12 2888608..2890557  PHAGE_Entero_phiP27: putative tail protein; SSON_2729; phage(gi18249911)  0.0  Click
13 2890984..2891487  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_2730; phage(gi16131317)  3e-95  Click
14 2891931..2893322  PHAGE_Entero_phiP27: hypothetical protein P27p48; SSON_2731; phage(gi18249912)  0.0  Click
15 2893319..2894401  PHAGE_Entero_phiP27: putative tail protein; SSON_2732; phage(gi18249913)  0.0  Click
16 2894379..2894912  PHAGE_Entero_phiP27: putative baseplate assembly protein; SSON_2733; phage(gi18249914)  3e-94  Click
17 2894918..2895328  PHAGE_Entero_phiP27: hypothetical protein P27p51; SSON_2734; phage(gi18249915)  7e-72  Click
18 2895321..2895995  PHAGE_Entero_phiP27: hypothetical protein P27p52; SSON_2735; phage(gi18249916)  7e-112  Click
19 complement(2895930..2896433)  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_2736; phage(gi16131317)  3e-95  Click
20 2896788..2897180  PHAGE_Entero_phiP27: hypothetical protein P27p52; SSON_2737; phage(gi18249916)  5e-65  Click
21 2897180..2897770  PHAGE_Entero_phiP27: hypothetical protein P27p53; SSON_2738; phage(gi18249917)  2e-114  Click
22 2897757..2898797  PHAGE_Entero_phiP27: putative tail fiber protein; SSON_2739; phage(gi18249918)  3e-161  Click
23 2898950..2899345  PHAGE_Entero_phiP27: putative tail fiber assembly protein; SSON_2740; phage(gi18249919)  2e-57  Click
24 2899471..2900637  PHAGE_Entero_phiP27: putative tail fiber protein; SSON_2741; phage(gi18249920)  9e-80  Click
25 2900588..2901211  PHAGE_Entero_phiP27: hypothetical protein P27p57; SSON_2742; phage(gi18249921)  5e-80  Click
26 complement(2901410..2901772)  tRNA  N/A  Click
27 complement(2901987..2902469)  SsrA-binding protein; SSON_2743  N/A  Click
28 2902601..2903077  hypothetical protein; SSON_2744  N/A  Click
29 2903067..2903357  hypothetical protein; SSON_2745  N/A  Click
30 2903451..2904797  PROPHAGE_Escher_MG1655: IS4 transposase; SSON_2746; phage(gi16132099)  0.0  Click
31 2904817..2905023  hypothetical protein; SSON_2747  N/A  Click
32 2905058..2905399  translation inhibitor protein RaiA; SSON_2748  N/A  Click
33 2905503..2905550  leader peptide of chorismate mutase-P-prephenate dehydratase; SSON_2749  N/A  Click
34 2905650..2906810  bifunctional chorismate mutase/prephenate dehydratase; SSON_2750  N/A  Click
35 complement(2906853..2907974)  bifunctional chorismate mutase/prephenate dehydrogenase; SSON_2751  N/A  Click
36 complement(2907985..2909055)  phospho-2-dehydro-3-deoxyheptonate aldolase; SSON_2752  N/A  Click
37 2909264..2909641  hypothetical protein; SSON_2753  N/A  Click
38 2909869..2910372  PROPHAGE_Escher_MG1655: IS1 transposase B; SSON_2754; phage(gi16131317)  3e-95  Click
39 2910556..2911074  hypothetical protein; SSON_2755  N/A  Click
40 complement(2911174..2911887)  PROPHAGE_Escher_CFT073: transposase insF; SSON_2756; phage(gi26249410)  8e-136  Click
41 complement(2912028..2912330)  PROPHAGE_Xantho_33913: ISxac3 transposase; SSON_2757; phage(gi21231087)  1e-09  Click
42 complement(2912382..2912585)  IS600 ORF1; SSON_2758  N/A  Click
43 2912866..2914038  PROPHAGE_Escher_CFT073: transposase; SSON_2759; phage(gi26248360)  1e-34  Click
44 2914038..2914835  PROPHAGE_Escher_CFT073: transposase/IS protein; SSON_2760; phage(gi26248359)  5e-57  Click
45 2914897..2915946  PHAGE_Pseudo_MP1412: diguanylate-cyclase GGDEF domain; SSON_2761; phage(gi399529005)  3e-07  Click
46 2915962..2916444  putative outer membrane lipoprotein; SSON_2762  N/A  Click
47 complement(2916521..2916868)  50S ribosomal protein L19; SSON_2763  N/A  Click
48 complement(2916910..2917677)  tRNA (guanine-N(1)-)-methyltransferase; SSON_2764  N/A  Click
49 complement(2917708..2918256)  16S rRNA-processing protein RimM; SSON_2765  N/A  Click
50 complement(2918275..2918523)  30S ribosomal protein S16; SSON_2766  N/A  Click
51 complement(2918772..2920133)  signal recognition particle protein; SSON_2767  N/A  Click
52 2920225..2921091  hypothetical protein; SSON_2768  N/A  Click
53 2921202..2922398  hypothetical protein; SSON_2769  N/A  Click
54 complement(2922453..2923046)  heat shock protein GrpE; SSON_2770  N/A  Click
55 2923169..2924047  inorganic polyphosphate/ATP-NAD kinase; SSON_2771  N/A  Click
56 2924133..2925794  PHAGE_Human__8: LANA; SSON_2772; phage(gi139472804)  2e-05  Click
57 2925943..2926284  hypothetical protein; SSON_2773  N/A  Click
58 complement(2926343..2926666)  PROPHAGE_Escher_MG1655: IS4 transposase; SSON_2774; phage(gi16132099)  1e-51  Click
59 2927053..2927958  PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SSON_2775; phage(gi16130763)  6e-179  Click
60 complement(2927883..2929025)  PROPHAGE_Escher_MG1655: IS4 transposase; SSON_2776; phage(gi16132099)  0.0  Click
61 complement(2929075..2930319)  PHAGE_Entero_phiP27: putative portal protein; SSON_2777; phage(gi18249902)  0.0  Click
62 complement(2930231..2930413)  PHAGE_Entero_phiP27: putative integral membrane protein; SSON_2778; phage(gi18249901)  4e-29  Click
63 complement(2930425..2932158)  PHAGE_Entero_phiP27: putative terminase; SSON_2779; phage(gi18249900)  0.0  Click
64 complement(2932155..2932649)  PHAGE_Entero_SfV: small terminase subunit; SSON_2780; phage(gi19548991)  4e-90  Click
65 complement(2932771..2933121)  PHAGE_Entero_phiP27: hypothetical protein P27p34; SSON_2781; phage(gi18249898)  1e-66  Click
66 complement(2933164..2933628)  PHAGE_Entero_HK630: cell lysis protein Rz; SSON_2782; phage(gi428782852)  4e-73  Click
67 complement(2933625..2934122)  PHAGE_Entero_cdtI: lysin; SSON_2783; phage(gi148609440)  9e-93  Click
68 complement(2934122..2934337)  PHAGE_Entero_mEp460: porin; SSON_2784; phage(gi428782370)  9e-30  Click
69 complement(2935018..2935092)  tRNA  N/A  Click
70 complement(2935096..2935171)  tRNA  N/A  Click
71 complement(2935174..2935250)  tRNA  N/A  Click
72 complement(2935252..2935328)  tRNA  N/A  Click
73 complement(2935518..2936279)  PHAGE_Escher_TL_2011c: hypothetical protein; SSON_2789; phage(gi418487090)  1e-42  Click
74 complement(2936562..2936948)  PHAGE_Entero_2008: antitermination protein Q; SSON_2790; phage(gi209427762)  3e-60  Click
75 complement(2936938..2937309)  PHAGE_Escher_HK75: RusA-like protein; SSON_2791; phage(gi356870726)  2e-38  Click
76 complement(2937309..2937566)  PHAGE_Entero_phiP27: hypothetical protein P27p20; SSON_2792; phage(gi18249884)  1e-36  Click
77 complement(2937563..2939095)  PHAGE_Entero_phiP27: putative helicase; SSON_2793; phage(gi18249883)  0.0  Click
78 complement(2939070..2939975)  PROPHAGE_Escher_MG1655: IS2 transposase TnpB; SSON_2794; phage(gi16130763)  2e-173  Click
79 complement(2939933..2940298)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SSON_2795; phage(gi17546153)  1e-45  Click
Region 14, total : 9 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2958675..2959871  PROPHAGE_Escher_CFT073: transposase; SSON_2814; phage(gi26248352)  0.0  Click
2 2960280..2960729  hypothetical protein; SSON_2815  N/A  Click
3 complement(2960766..2961110)  hypothetical protein; SSON_2816  N/A  Click
4 2961250..2961591  hypothetical protein; SSON_2817  N/A  Click
5 2961839..2962084  PHAGE_Mycoba_Porky: gp37; SSON_2818; phage(gi194303333)  3e-10  Click
6 2962464..2964608  PHAGE_Entero_phiEF24C: putative ribonucleotide reductase; SSON_2820; phage(gi158079505)  0.0  Click
7 2964618..2965577  PHAGE_Mycoba_Myrna: gp256; SSON_2821; phage(gi203454817)  4e-129  Click
8 2965933..2967135  PHAGE_Plankt_PaV_LD: ABC transporter; SSON_2822; phage(gi371496158)  3e-24  Click
9 2967128..2968192  PHAGE_Lactob_Lj771: minor tail protein gp26-like protein; SSON_2823; phage(gi163932195)  1e-05  Click