Definition Psychrobacter arcticus 273-4, complete genome.
Accession NC_007204
Length 2,650,701
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 40 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 542631..542642  attL    CAGAAGGCATTG  N/A  Click
2 complement(550716..551261)  PHAGE_Acinet_Ac42: putative N-acetylmuramoyl-L-alanine amidase; Psyc_0440; phage(gi311992511)  6e-56  Click
3 complement(551327..551650)  PHAGE_Vibrio_VvAW1: hypothetical protein; Psyc_0441; phage(gi460042904)  1e-14  Click
4 complement(551715..552266)  PHAGE_Haemop_SuMu: putative tail fiber assembly protein; Psyc_0442; phage(gi418489074)  1e-09  Click
5 complement(552271..555444)  PHAGE_Entero_mEp237: central tail fiber; Psyc_0443; phage(gi435439285)  0.0  Click
6 complement(555447..556010)  PHAGE_Escher_HK75: tail assembly protein; Psyc_0444; phage(gi356870696)  1e-31  Click
7 complement(556066..556815)  PHAGE_Synech_S_CBS4: phage tail assembly protein; Psyc_0445; phage(gi374531779)  3e-35  Click
8 complement(556815..557633)  PHAGE_Entero_mEp213: minor tail protein; Psyc_0446; phage(gi428782604)  5e-49  Click
9 complement(557921..559009)  PHAGE_Bordet_1: reverse transcriptase; Psyc_0447; phage(gi41179367)  5e-38  Click
10 complement(559269..559652)  hypothetical protein; Psyc_0448  N/A  Click
11 complement(559678..561144)  PHAGE_Campyl_CP21: hypothetical protein; Psyc_0449; phage(gi422935121)  7e-21  Click
12 complement(561153..561491)  PHAGE_Escher_HK75: minor tail protein; Psyc_0450; phage(gi356870692)  2e-13  Click
13 complement(561553..561825)  PHAGE_Escher_HK639: hypothetical protein; Psyc_0451; phage(gi356870616)  8e-06  Click
14 complement(562011..565082)  PHAGE_Pseudo_vB_PaeS_PMG1: tail tape measure protein; Psyc_0452; phage(gi374531664)  4e-80  Click
15 complement(565254..565784)  hypothetical protein; Psyc_0453  N/A  Click
16 complement(565850..566074)  hypothetical protein; Psyc_0454  N/A  Click
17 complement(566176..566541)  hypothetical protein; Psyc_0455  N/A  Click
18 complement(566615..567037)  hypothetical protein; Psyc_0456  N/A  Click
19 complement(567059..567418)  PHAGE_Escher_HK75: hypothetical protein; Psyc_0457; phage(gi356870686)  9e-05  Click
20 complement(567436..567903)  PHAGE_Burkho_Bcep176: gp72; Psyc_0458; phage(gi77864698)  6e-08  Click
21 complement(567896..568228)  phage head-tail adaptor protein; Psyc_0459  N/A  Click
22 complement(568230..568538)  hypothetical protein; Psyc_0460  N/A  Click
23 complement(568652..569905)  PHAGE_Escher_HK75: major capsid protein precursor; Psyc_0461; phage(gi356870682)  2e-50  Click
24 complement(569983..570729)  PHAGE_Escher_HK75: prohead protease; Psyc_0462; phage(gi356870681)  8e-14  Click
25 complement(570722..571957)  PHAGE_Escher_HK75: portal protein; Psyc_0463; phage(gi356870680)  5e-49  Click
26 complement(571959..573704)  PHAGE_Salmon_ST64B: Terminase large subunit; Psyc_0464; phage(gi23505447)  3e-128  Click
27 complement(573711..574184)  PHAGE_Bacill_phIS3501: terminase small subunit; Psyc_0465; phage(gi422934327)  4e-08  Click
28 complement(574289..574735)  PHAGE_Bacill_phi105: hypothetical protein phi105_50; Psyc_0466; phage(gi22855043)  4e-20  Click
29 complement(574862..575263)  hypothetical protein; Psyc_0467  N/A  Click
30 complement(575616..577316)  PHAGE_Stenot_S1: putative primase; Psyc_0468; phage(gi213163899)  9e-50  Click
31 complement(577513..578529)  PHAGE_Entero_P4: DNA primase; Psyc_0469; phage(gi9627512)  1e-26  Click
32 complement(578519..579022)  hypothetical protein; Psyc_0470  N/A  Click
33 complement(579064..579318)  PHAGE_Salmon_ST160: Cro; Psyc_0471; phage(gi318065926)  3e-07  Click
34 579446..580120  PHAGE_Acinet_Bphi_B1251: putative repressor protein; Psyc_0472; phage(gi423261983)  2e-33  Click
35 580383..580658  hypothetical protein; Psyc_0473  N/A  Click
36 580655..581611  hypothetical protein; Psyc_0474  N/A  Click
37 581604..581957  hypothetical protein; Psyc_0475  N/A  Click
38 581957..582475  hypothetical protein; Psyc_0476  N/A  Click
39 582890..583405  PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; Psyc_0477; phage(gi374531705)  1e-08  Click
40 583405..583605  PHAGE_Vibrio_VHML: DksA-like zinc finger domain containing protein; Psyc_0478; phage(gi27311231)  2e-07  Click
41 583878..583889  attR    CAGAAGGCATTG  N/A  Click
42 584020..585093  PHAGE_Bordet_1: integrase; Psyc_0479; phage(gi45569541)  4e-31  Click
Region 2, total : 10 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 756847..757113  PROPHAGE_Xantho_306: ISxac2 transposase; Psyc_0636; phage(gi21244663)  2e-30  Click
2 757185..757934  PROPHAGE_Xantho_306: ISxcd1 transposase; Psyc_0637; phage(gi21242257)  3e-92  Click
3 complement(758105..760048)  PHAGE_Salmon_c341: O-polysaccharide acetyltransferase protein; Psyc_0638; phage(gi255252697)  8e-66  Click
4 760140..760406  PROPHAGE_Xantho_306: ISxac2 transposase; Psyc_0639; phage(gi21244663)  2e-30  Click
5 760478..761227  PROPHAGE_Xantho_306: ISxcd1 transposase; Psyc_0640; phage(gi21242257)  3e-92  Click
6 761434..761790  PHAGE_Salmon_ST160: GtrA; Psyc_0641; phage(gi318065904)  3e-33  Click
7 761794..762708  PHAGE_Salmon_ST160: GtrB; Psyc_0642; phage(gi318065903)  1e-135  Click
8 762710..764374  hypothetical protein; Psyc_0643  N/A  Click
9 764656..764955  PROPHAGE_Xantho_33913: ISxac3 transposase; Psyc_0644; phage(gi21231087)  1e-09  Click
10 765000..765902  PROPHAGE_Escher_CFT073: transposase insF; Psyc_0645; phage(gi26249410)  6e-67  Click
Region 3, total : 16 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1191891..1192469  PHAGE_Pectob_ZF40: putative transposase; Psyc_0999; phage(gi422936679)  6e-44  Click
2 1192502..1192975  PHAGE_Salmon_vB_SosS_Oslo: hypothetical protein; Psyc_1000; phage(gi399528759)  4e-42  Click
3 1192956..1194221  PHAGE_Pseudo_phi297: terminase large subunit; Psyc_1001; phage(gi374531285)  5e-145  Click
4 1194218..1195735  PHAGE_Burkho_KS10: hypothetical protein KS10_gp03; Psyc_1002; phage(gi198449265)  5e-15  Click
5 1195738..1196535  PHAGE_Burkho_KS10: MuF-like protein; Psyc_1003; phage(gi198449263)  2e-17  Click
6 1197089..1198297  PHAGE_Burkho_BcepNazgul: prohead protease ClpP; Psyc_1004; phage(gi91214231)  2e-30  Click
7 1198297..1198674  hypothetical protein; Psyc_1005  N/A  Click
8 1198686..1199780  PHAGE_Burkho_AH2: major capsid protein; Psyc_1006; phage(gi399529101)  4e-14  Click
9 1199836..1200120  hypothetical protein; Psyc_1007  N/A  Click
10 1200124..1200561  PHAGE_Haemop_SuMu: Mu-like prophage protein gp36; Psyc_1008; phage(gi418489087)  7e-10  Click
11 1200578..1200994  PHAGE_Burkho_KS10: MuG-like protein; Psyc_1009; phage(gi198449296)  9e-09  Click
12 1200991..1201416  hypothetical protein; Psyc_1010  N/A  Click
13 1201429..1202175  PHAGE_Pseudo_B3: hypothetical protein B3ORF43; Psyc_1011; phage(gi56692612)  1e-16  Click
14 1202316..1202651  hypothetical protein; Psyc_1012  N/A  Click
15 1202648..1203022  hypothetical protein; Psyc_1013  N/A  Click
16 1203019..1204227  PHAGE_Synech_S_SKS1: hypothetical protein; Psyc_1014; phage(gi472340983)  5e-44  Click