| Definition | Staphylococcus haemolyticus JCSC1435 chromosome, complete genome. |
|---|---|
| Accession | NC_007168 |
| Length | 2,685,015 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 14 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1803560..1803571 | attL TGTAATTTTTGA | N/A | Click |
| 2 | complement(1807449..1807982) | PHAGE_Lactoc_bIL311: Orf21; SH1747; phage(gi13095679) | 7e-09 | Click |
| 3 | complement(1808214..1809608) | PHAGE_Staphy_phiETA3: amidase; SH1748; phage(gi122891851) | 0.0 | Click |
| 4 | complement(1809609..1809869) | PHAGE_Staphy_PH15: putative phage holin; SH1749; phage(gi119967859) | 3e-24 | Click |
| 5 | complement(1809920..1810318) | PHAGE_Synech_S_SKS1: hypothetical protein; SH1750; phage(gi472340875) | 4e-05 | Click |
| 6 | complement(1810302..1810721) | PHAGE_Staphy_StB20: hypothetical protein; SH1751; phage(gi431809787) | 3e-12 | Click |
| 7 | complement(1810758..1810907) | hypothetical protein; SH1752 | N/A | Click |
| 8 | complement(1810897..1813401) | PHAGE_Entero_phiFL2A: hypothetical protein; SH1753; phage(gi281416547) | 1e-51 | Click |
| 9 | complement(1813415..1815226) | hypothetical protein; SH1754 | N/A | Click |
| 10 | complement(1815238..1816071) | PHAGE_Staphy_2: phage tail tape measure protein like; SH1755; phage(gi156604006) | 9e-12 | Click |
| 11 | complement(1816074..1820537) | PHAGE_Staphy_phi5967PVL: phage tail tape measure protein; SH1756; phage(gi431810278) | 2e-156 | Click |
| 12 | complement(1820766..1821674) | PHAGE_Lactob_1: hypothetical protein lb338_phage_92; SH1757; phage(gi226377722) | 3e-37 | Click |
| 13 | complement(1821811..1823889) | PHAGE_Strept_phi3396: putative phage-related tail tape measure protein; SH1758; phage(gi126011107) | 1e-39 | Click |
| 14 | complement(1824212..1825027) | ATP-binding protein; SH1759 | N/A | Click |
| 15 | 1824702..1824713 | attR TGTAATTTTTGA | N/A | Click |
| 16 | complement(1825020..1826462) | PROPHAGE_Deinoc_R1: transposase, putative; SH1760; phage(gi15807743) | 1e-17 | Click |
Region 2, total : 46 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1829883..1829894 | attL ATAGTGATAATA | N/A | Click |
| 2 | complement(1830706..1831068) | PHAGE_Staphy_2638A: ORF028; SH1765; phage(gi66395475) | 6e-49 | Click |
| 3 | complement(1831130..1831297) | PHAGE_Staphy_2638A: ORF096; SH1766; phage(gi66395502) | 5e-12 | Click |
| 4 | complement(1831311..1831952) | PHAGE_Staphy_P954: phage tail superfamily; SH1767; phage(gi257136412) | 4e-58 | Click |
| 5 | complement(1831953..1832360) | PHAGE_Staphy_2638A: ORF024; SH1768; phage(gi66395472) | 4e-47 | Click |
| 6 | complement(1832357..1832779) | PHAGE_Staphy_2638A: ORF023; SH1769; phage(gi66395471) | 2e-43 | Click |
| 7 | complement(1832769..1833140) | PHAGE_Staphy_2638A: ORF027; SH1770; phage(gi66395474) | 3e-54 | Click |
| 8 | complement(1833130..1833426) | PHAGE_Staphy_2638A: ORF036; SH1771; phage(gi66395481) | 5e-25 | Click |
| 9 | complement(1833444..1834622) | PHAGE_Staphy_P954: major capsid protein a; SH1772; phage(gi257136406) | 1e-92 | Click |
| 10 | complement(1834685..1835551) | PHAGE_Staphy_2638A: ORF013; SH1773; phage(gi66395463) | 1e-76 | Click |
| 11 | complement(1835544..1836689) | PHAGE_Staphy_P954: HK97 family phage portal protein; SH1774; phage(gi257136404) | 9e-99 | Click |
| 12 | complement(1836709..1838370) | PHAGE_Staphy_2638A: ORF005; SH1775; phage(gi66395455) | 0.0 | Click |
| 13 | complement(1838367..1838726) | PHAGE_Staphy_2638A: ORF031; SH1776; phage(gi66395478) | 3e-30 | Click |
| 14 | complement(1838938..1839264) | PHAGE_Staphy_2638A: ORF026; SH1777; phage(gi66395473) | 4e-41 | Click |
| 15 | complement(1839382..1839825) | PHAGE_Staphy_3: hypothetical protein SPTP3103_gp32; SH1778; phage(gi156604049) | 5e-38 | Click |
| 16 | complement(1839839..1841197) | PHAGE_Staphy_2638A: ORF008; SH1779; phage(gi66395458) | 0.0 | Click |
| 17 | complement(1841199..1841477) | PHAGE_Staphy_2638A: ORF037; SH1780; phage(gi66395482) | 2e-41 | Click |
| 18 | complement(1841834..1844281) | PHAGE_Staphy_2638A: ORF003; SH1781; phage(gi66395453) | 0.0 | Click |
| 19 | complement(1844296..1844433) | hypothetical protein; SH1782 | N/A | Click |
| 20 | complement(1844433..1844672) | PHAGE_Staphy_StB27: RinB; SH1783; phage(gi431809700) | 4e-12 | Click |
| 21 | complement(1844678..1844887) | hypothetical protein; SH1784 | N/A | Click |
| 22 | complement(1844893..1845117) | PHAGE_Staphy_PH15: hypothetical protein ph64; SH1785; phage(gi119967896) | 4e-08 | Click |
| 23 | complement(1845117..1845335) | hypothetical protein; SH1786 | N/A | Click |
| 24 | complement(1845342..1845500) | hypothetical protein; SH1787 | N/A | Click |
| 25 | complement(1845537..1845851) | PHAGE_Staphy_vB_SepiS_phiIPLA7: DNA binding protein; SH1788; phage(gi399529174) | 1e-48 | Click |
| 26 | complement(1845852..1846337) | hypothetical protein; SH1789 | N/A | Click |
| 27 | complement(1846334..1846573) | PHAGE_Staphy_vB_SepiS_phiIPLA7: hypothetical protein; SH1790; phage(gi399529172) | 3e-12 | Click |
| 28 | complement(1846590..1847222) | PHAGE_Staphy_X2: ORF017; SH1791; phage(gi66394687) | 8e-69 | Click |
| 29 | complement(1847237..1847665) | PHAGE_Staphy_phiPV83: single strand DNA binding protein; SH1792; phage(gi9635695) | 2e-58 | Click |
| 30 | complement(1847662..1848330) | PHAGE_Staphy_37: ORF018; SH1793; phage(gi66395747) | 3e-99 | Click |
| 31 | complement(1848320..1848550) | PHAGE_Staphy_CNPH82: hypothetical protein cn41; SH1794; phage(gi119953719) | 3e-26 | Click |
| 32 | complement(1848519..1848794) | PHAGE_Staphy_StB27: hypothetical protein; SH1795; phage(gi431809688) | 4e-06 | Click |
| 33 | complement(1848879..1849049) | PHAGE_Staphy_StB27: hypothetical protein; SH1796; phage(gi431809686) | 6e-06 | Click |
| 34 | complement(1849052..1849369) | PHAGE_Staphy_69: ORF045; SH1797; phage(gi66395334) | 2e-43 | Click |
| 35 | 1849429..1849605 | hypothetical protein; SH1798 | N/A | Click |
| 36 | complement(1849767..1850306) | PHAGE_Strept_5093: hypothetical protein st5093phage_46; SH1799; phage(gi238801926) | 4e-12 | Click |
| 37 | complement(1850299..1851225) | PHAGE_Bacill_IEBH: hypothetical protein IEBH_gp01; SH1800; phage(gi197261597) | 1e-43 | Click |
| 38 | 1851272..1851511 | hypothetical protein; SH1801 | N/A | Click |
| 39 | complement(1851456..1851650) | hypothetical protein; SH1802 | N/A | Click |
| 40 | complement(1851688..1852479) | PHAGE_Staphy_phiNM: antirepressor; SH1803; phage(gi118430732) | 1e-32 | Click |
| 41 | complement(1852479..1852673) | PHAGE_Staphy_phiETA3: Cro protein; SH1804; phage(gi122891791) | 2e-25 | Click |
| 42 | 1852953..1853291 | PHAGE_Staphy_phiETA3: repressor; SH1805; phage(gi122891790) | 8e-33 | Click |
| 43 | 1853305..1853976 | PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp05; SH1806; phage(gi122891789) | 8e-49 | Click |
| 44 | 1854058..1854585 | PHAGE_Lactob_Lj965: putative superinfection immunity protein; SH1807; phage(gi41179219) | 6e-24 | Click |
| 45 | 1854251..1854262 | attR ATAGTGATAATA | N/A | Click |
| 46 | 1854643..1855668 | PHAGE_Staphy_3: integrase; SH1808; phage(gi156604018) | 2e-122 | Click |
| 47 | complement(1856165..1856674) | hypothetical protein; SH1809 | N/A | Click |
| 48 | complement(1856674..1857255) | PHAGE_Uganda_virus: polyprotein; SH1810; phage(gi314998982) | 9e-16 | Click |
Region 3, total : 22 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2117677..2117691 | attL GTGGAGACGGCGGGA | N/A | Click |
| 2 | complement(2122930..2123502) | PHAGE_Staphy_PT1028: ORF009; SH2084; phage(gi66395173) | 1e-63 | Click |
| 3 | complement(2123513..2123842) | PHAGE_Staphy_PT1028: ORF014; SH2085; phage(gi66395178) | 3e-12 | Click |
| 4 | complement(2123839..2124276) | PHAGE_Staphy_PT1028: ORF010; SH2086; phage(gi66395174) | 7e-32 | Click |
| 5 | complement(2124331..2124540) | hypothetical protein; SH2087 | N/A | Click |
| 6 | complement(2124540..2125130) | PHAGE_Epiphy_NPV: hypothetical protein; SH2088; phage(gi15320716) | 2e-05 | Click |
| 7 | complement(2125208..2125540) | PHAGE_Staphy_PT1028: ORF015; SH2089; phage(gi66395179) | 3e-30 | Click |
| 8 | complement(2125707..2125820) | hypothetical protein; SH2090 | N/A | Click |
| 9 | complement(2125957..2126601) | PHAGE_Staphy_PT1028: ORF008; SH2091; phage(gi66395172) | 4e-80 | Click |
| 10 | complement(2126607..2126957) | PHAGE_Staphy_PT1028: ORF013; SH2092; phage(gi66395177) | 5e-12 | Click |
| 11 | complement(2127201..2128568) | PHAGE_Strept_6: putative DNA primase/helicase; SH2093; phage(gi28876472) | 7e-34 | Click |
| 12 | complement(2128580..2129449) | PHAGE_Staphy_PT1028: ORF003; SH2094; phage(gi66395167) | 2e-91 | Click |
| 13 | complement(2129538..2129843) | PHAGE_Staphy_PT1028: ORF016; SH2095; phage(gi66395180) | 2e-18 | Click |
| 14 | complement(2129858..2130061) | hypothetical protein; SH2096 | N/A | Click |
| 15 | complement(2130074..2130328) | hypothetical protein; SH2097 | N/A | Click |
| 16 | complement(2130330..2130533) | PHAGE_Staphy_phiMR25: hypothetical protein; SH2098; phage(gi189427130) | 3e-07 | Click |
| 17 | complement(2130537..2130737) | hypothetical protein; SH2099 | N/A | Click |
| 18 | complement(2130750..2130968) | PHAGE_Staphy_SpaA1: transcriptional regulator, pbsX; SH2100; phage(gi399498897) | 8e-09 | Click |
| 19 | 2131156..2132073 | PHAGE_Lactoc_bIL311: repressor; SH2101; phage(gi13095660) | 7e-15 | Click |
| 20 | 2132063..2133151 | PHAGE_Bacill_phIS3501: phage integrase; SH2102; phage(gi422934298) | 5e-80 | Click |
| 21 | 2133165..2133881 | hypothetical protein; SH2103 | N/A | Click |
| 22 | complement(2133977..2134336) | tRNA | N/A | Click |
| 23 | 2133977..2133991 | attR GTGGAGACGGCGGGA | N/A | Click |
| 24 | complement(2134543..2135013) | SsrA-binding protein; SH2104 | N/A | Click |
| 25 | complement(2135038..2137416) | PHAGE_Lactoc_Q54: putative ribonuclease; SH2105; phage(gi115304286) | 1e-96 | Click |
Region 4, total : 66 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2352533..2352546 | attL ATTTATTATAACAT | N/A | Click |
| 2 | complement(2353153..2354637) | PHAGE_Staphy_JD007: autolysin (n-acetylmuramoyl-l-alanine amidase); SH2333; phage(gi428783048) | 2e-154 | Click |
| 3 | complement(2354612..2355097) | PHAGE_Staphy_StB20: holin; SH2334; phage(gi431809792) | 7e-39 | Click |
| 4 | complement(2355150..2357537) | PHAGE_Staphy_StB20: tail protein; SH2335; phage(gi431809789) | 4e-58 | Click |
| 5 | complement(2357588..2359531) | PHAGE_Staphy_vB_SepiS_phiIPLA7: amidase; SH2336; phage(gi399529141) | 0.0 | Click |
| 6 | complement(2359574..2359969) | hypothetical protein; SH2337 | N/A | Click |
| 7 | complement(2359953..2360408) | PHAGE_Lister_B054: gp29; SH2338; phage(gi157325313) | 2e-10 | Click |
| 8 | complement(2360423..2360563) | hypothetical protein; SH2339 | N/A | Click |
| 9 | complement(2360547..2360891) | PHAGE_Staphy_vB_SepiS_phiIPLA7: hypothetical protein; SH2340; phage(gi399529139) | 1e-25 | Click |
| 10 | complement(2360902..2362401) | PHAGE_Staphy_vB_SepiS_phiIPLA7: hypothetical protein; SH2341; phage(gi399529138) | 9e-126 | Click |
| 11 | complement(2362401..2365067) | PHAGE_Staphy_vB_SepiS_phiIPLA7: pre neck appendage protein; SH2342; phage(gi399529137) | 0.0 | Click |
| 12 | complement(2365079..2366920) | PHAGE_Staphy_vB_SepiS_phiIPLA7: virion associated hydrolase; SH2343; phage(gi399529136) | 0.0 | Click |
| 13 | complement(2366931..2367947) | PHAGE_Staphy_vB_SepiS_phiIPLA7: hypothetical protein; SH2344; phage(gi399529135) | 1e-114 | Click |
| 14 | complement(2367886..2371098) | PHAGE_Staphy_vB_SepiS_phiIPLA7: tail tape measure protein; SH2345; phage(gi399529134) | 0.0 | Click |
| 15 | complement(2371103..2371411) | PHAGE_Staphy_vB_SepiS_phiIPLA7: hypothetical protein; SH2346; phage(gi399529133) | 2e-20 | Click |
| 16 | complement(2371441..2371944) | PHAGE_Staphy_vB_SepiS_phiIPLA5: tail protein; SH2347; phage(gi399528908) | 3e-62 | Click |
| 17 | complement(2372009..2372548) | PHAGE_Staphy_vB_SepiS_phiIPLA7: major tail protein; SH2348; phage(gi399529131) | 3e-49 | Click |
| 18 | complement(2372551..2372973) | PHAGE_Staphy_phiETA3: tail protein; SH2349; phage(gi122891835) | 2e-62 | Click |
| 19 | complement(2372989..2373402) | PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp50; SH2350; phage(gi122891834) | 9e-60 | Click |
| 20 | complement(2373395..2373724) | PHAGE_Staphy_vB_SepiS_phiIPLA5: head tail adaptor; SH2351; phage(gi399528904) | 2e-39 | Click |
| 21 | complement(2373717..2374031) | PHAGE_Staphy_vB_SepiS_phiIPLA7: head protein; SH2352; phage(gi399529127) | 2e-37 | Click |
| 22 | complement(2374031..2374324) | PHAGE_Staphy_vB_SepiS_phiIPLA7: rho termination protein; SH2353; phage(gi399529126) | 6e-34 | Click |
| 23 | complement(2374338..2375159) | PHAGE_Staphy_vB_SepiS_phiIPLA7: major head protein; SH2354; phage(gi399529125) | 2e-137 | Click |
| 24 | complement(2375181..2375771) | PHAGE_Staphy_vB_SepiS_phiIPLA7: minor head protein; SH2355; phage(gi399529124) | 7e-88 | Click |
| 25 | complement(2375869..2376825) | PHAGE_Staphy_vB_SepiS_phiIPLA7: minor head protein; SH2356; phage(gi399529123) | 7e-136 | Click |
| 26 | complement(2376770..2378113) | PHAGE_Staphy_ROSA: ORF007; SH2357; phage(gi66395972) | 0.0 | Click |
| 27 | complement(2378207..2379472) | PHAGE_Staphy_CNPH82: putative large terminase subunit; SH2358; phage(gi119953680) | 0.0 | Click |
| 28 | complement(2379456..2379836) | PHAGE_Staphy_vB_SepiS_phiIPLA7: terminase smal subunit; SH2359; phage(gi399529120) | 5e-37 | Click |
| 29 | 2379938..2380051 | hypothetical protein; SH2360 | N/A | Click |
| 30 | complement(2380151..2380567) | PHAGE_Staphy_vB_SepiS_phiIPLA7: RinA; SH2361; phage(gi399529178) | 6e-61 | Click |
| 31 | complement(2380564..2381016) | PHAGE_Staphy_vB_SepiS_phiIPLA7: hypothetical protein; SH2362; phage(gi399529176) | 4e-07 | Click |
| 32 | complement(2381018..2381197) | PHAGE_Staphy_2638A: ORF083; SH2363; phage(gi66395499) | 7e-08 | Click |
| 33 | complement(2381199..2381357) | PHAGE_Staphy_vB_SepiS_phiIPLA7: RinB; SH2364; phage(gi399529175) | 3e-08 | Click |
| 34 | complement(2381350..2381562) | PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; SH2365; phage(gi399528957) | 7e-11 | Click |
| 35 | complement(2381575..2381778) | hypothetical protein; SH2366 | N/A | Click |
| 36 | complement(2381775..2382047) | PHAGE_Staphy_Twort: ORF146; SH2367; phage(gi66391387) | 1e-22 | Click |
| 37 | complement(2382087..2382509) | PHAGE_Staphy_StB20: dUTPase; SH2368; phage(gi431809758) | 8e-51 | Click |
| 38 | complement(2382510..2382797) | PHAGE_Staphy_26: hypothetical protein SAP26_gp55; SH2369; phage(gi304443293) | 8e-23 | Click |
| 39 | complement(2382787..2383182) | PHAGE_Staphy_CNPH82: hypothetical protein cn58; SH2370; phage(gi119953736) | 2e-15 | Click |
| 40 | complement(2383179..2383577) | PHAGE_Staphy_vB_SepiS_phiIPLA7: hypothetical protein; SH2371; phage(gi399529170) | 1e-37 | Click |
| 41 | complement(2383748..2384203) | PHAGE_Entero_vB_EcoP_ACG_C91: hypothetical protein; SH2372; phage(gi414087605) | 3e-06 | Click |
| 42 | complement(2384208..2384768) | PHAGE_Staphy_37: ORF025; SH2373; phage(gi66395752) | 8e-14 | Click |
| 43 | complement(2384773..2384967) | hypothetical protein; SH2374 | N/A | Click |
| 44 | complement(2384967..2385371) | PHAGE_Staphy_vB_SepiS_phiIPLA7: resolvase; SH2375; phage(gi399529164) | 3e-58 | Click |
| 45 | complement(2385382..2385606) | PHAGE_Staphy_phiETA: hypothetical protein phiETA_24; SH2376; phage(gi17426252) | 9e-24 | Click |
| 46 | complement(2385606..2385767) | PHAGE_Staphy_69: ORF101; SH2377; phage(gi66395362) | 3e-10 | Click |
| 47 | complement(2385761..2386531) | PHAGE_Staphy_26: hypothetical protein SAP26_gp47; SH2378; phage(gi304443285) | 4e-103 | Click |
| 48 | complement(2386544..2387320) | PHAGE_Staphy_IPLA88: hypothetical protein SauSIPLA88_gp17; SH2379; phage(gi215401187) | 1e-67 | Click |
| 49 | complement(2387313..2388071) | PHAGE_Entero_RB16: putative homing endonuclease RB16 2; SH2380; phage(gi304373611) | 3e-09 | Click |
| 50 | complement(2388077..2388307) | PHAGE_Pectob_ZF40: putative cI repressor; SH2381; phage(gi422936650) | 1e-06 | Click |
| 51 | complement(2388282..2388971) | PHAGE_Staphy_52A: ORF020; SH2382; phage(gi66396287) | 2e-102 | Click |
| 52 | complement(2388983..2389528) | PHAGE_Staphy_55: ORF024; SH2383; phage(gi66396137) | 3e-87 | Click |
| 53 | complement(2389560..2390345) | PHAGE_Staphy_55: ORF017; SH2384; phage(gi66396130) | 4e-120 | Click |
| 54 | complement(2390338..2390595) | PHAGE_Staphy_PH15: hypothetical protein ph45; SH2385; phage(gi119967877) | 1e-05 | Click |
| 55 | complement(2390570..2390818) | hypothetical protein; SH2386 | N/A | Click |
| 56 | complement(2391038..2391163) | hypothetical protein; SH2387 | N/A | Click |
| 57 | 2391222..2391434 | PHAGE_Staphy_phiSLT: hypothetical protein phiSLTp09; SH2388; phage(gi12719401) | 1e-08 | Click |
| 58 | complement(2391424..2391567) | PHAGE_Staphy_71: ORF132; SH2389; phage(gi66396109) | 6e-18 | Click |
| 59 | complement(2391606..2392145) | PHAGE_Strept_5093: hypothetical protein st5093phage_46; SH2390; phage(gi238801926) | 4e-12 | Click |
| 60 | complement(2392138..2393067) | PHAGE_Bacill_IEBH: hypothetical protein IEBH_gp01; SH2391; phage(gi197261597) | 6e-41 | Click |
| 61 | 2393114..2393320 | PHAGE_Staphy_CNPH82: hypothetical protein cn37; SH2392; phage(gi119953715) | 3e-32 | Click |
| 62 | complement(2393487..2393726) | PHAGE_Staphy_vB_SepiS_phiIPLA5: cro; SH2393; phage(gi399528928) | 9e-22 | Click |
| 63 | 2393915..2394589 | PHAGE_Staphy_phiNM: phage repressor protein; SH2394; phage(gi118430728) | 1e-68 | Click |
| 64 | 2394607..2394744 | PHAGE_Staphy_StB20: transcription repressor; SH2395; phage(gi431809733) | 2e-16 | Click |
| 65 | 2394861..2394874 | attR ATTTATTATAACAT | N/A | Click |
| 66 | 2394908..2396293 | PHAGE_Staphy_vB_SepiS_phiIPLA7: integrase; SH2396; phage(gi399529147) | 0.0 | Click |
| 67 | 2396649..2397512 | hypothetical protein; SH2397 | N/A | Click |
| 68 | 2397745..2397948 | PHAGE_Lactoc_bIL312: Csp; SH2398; phage(gi13095918) | 3e-21 | Click |