Definition Haemophilus influenzae 86-028NP chromosome, complete genome.
Accession NC_007146
Length 1,914,490
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 87 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1408248..1408264  attL    TCCAGCTAGTCGCACCA  N/A  Click
2 1408494..1409753  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; NTHI1480; phage(gi16130540)  2e-85  Click
3 complement(1410367..1410636)  hypothetical protein; NTHI1482  N/A  Click
4 complement(1410741..1410911)  hypothetical protein; NTHI1483  N/A  Click
5 complement(1410901..1411434)  hypothetical protein; NTHI1484  N/A  Click
6 complement(1411506..1411922)  PHAGE_Acinet_Ac42: Arn.3 conserved hypothetical protein; NTHI1485; phage(gi311992576)  2e-10  Click
7 complement(1411926..1412603)  hypothetical protein; NTHI1486  N/A  Click
8 complement(1412622..1413785)  PHAGE_Entero_P1: Dmt; NTHI1487; phage(gi46401691)  1e-72  Click
9 complement(1414391..1415287)  PHAGE_Vibrio_VHML: ORF10; NTHI1488; phage(gi27311176)  8e-56  Click
10 complement(1415412..1416758)  PHAGE_Equid__9: envelope glycoprotein J; NTHI1489; phage(gi216905924)  3e-17  Click
11 complement(1416820..1417254)  PHAGE_Vibrio_VvAW1: single-stranded DNA-binding protein; NTHI1490; phage(gi460042909)  3e-23  Click
12 complement(1417254..1417898)  PHAGE_Psychr_pOW20_A: hypothetical protein; NTHI1491; phage(gi472339793)  3e-43  Click
13 complement(1417879..1418799)  PHAGE_Psychr_pOW20_A: recombinase; NTHI1492; phage(gi472339794)  3e-57  Click
14 complement(1418812..1419105)  hypothetical protein; NTHI1493  N/A  Click
15 complement(1419102..1419446)  hypothetical protein; NTHI1494  N/A  Click
16 complement(1419460..1420197)  PHAGE_Lactoc_Tuc2009: putative methylase; NTHI1495; phage(gi13487817)  7e-108  Click
17 complement(1420288..1421319)  PHAGE_Aggreg_S1249: putative antirepressor protein Ant; NTHI1497; phage(gi273809579)  7e-44  Click
18 complement(1421309..1421560)  PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; NTHI1498; phage(gi399528947)  5e-13  Click
19 complement(1421679..1421990)  hypothetical protein; NTHI1499  N/A  Click
20 complement(1422376..1422561)  hypothetical protein; NTHI1501  N/A  Click
21 complement(1422722..1423870)  hypothetical protein; NTHI1502  N/A  Click
22 complement(1423881..1424741)  PHAGE_Haemop_HP2: hypothetical protein HP2p02; NTHI1503; phage(gi17981817)  2e-09  Click
23 complement(1424804..1425169)  PHAGE_Haemop_Aaphi23: putative anti-termination protein Q; NTHI1504; phage(gi31544020)  4e-05  Click
24 complement(1425171..1425758)  PHAGE_Salmon_SPN3UB: NinG; NTHI1505; phage(gi423262439)  1e-40  Click
25 1425914..1426099  hypothetical protein; NTHI1507  N/A  Click
26 1426130..1426558  PHAGE_Haemop_HP2: hypothetical protein HP2p14; NTHI1508; phage(gi17981828)  1e-12  Click
27 complement(1426559..1427068)  PHAGE_Thalas_BA3: hypothetical protein BA3_0042; NTHI1509; phage(gi160700636)  2e-41  Click
28 complement(1427073..1427663)  PHAGE_Salmon_vB_SosS_Oslo: DNA methyltransferase protein; NTHI1510; phage(gi399528822)  6e-20  Click
29 complement(1427660..1428295)  PHAGE_Aggreg_S1249: possible bacteriophage replication protein P; NTHI1511; phage(gi273809587)  2e-21  Click
30 complement(1428280..1429062)  PHAGE_Aggreg_S1249: replication protein; NTHI1512; phage(gi273809588)  1e-44  Click
31 complement(1429064..1429297)  PHAGE_Sulfit_pCB2047_C: hypothetical protein; NTHI1513; phage(gi472341794)  3e-07  Click
32 complement(1429343..1429795)  PHAGE_Burkho_2: gp53; NTHI1515; phage(gi134288635)  1e-06  Click
33 complement(1429839..1430045)  PHAGE_Salmon_ST160: Cro; NTHI1516; phage(gi318065926)  4e-11  Click
34 1430179..1431147  PHAGE_Mannhe_phiMHaA1: CI repressor; NTHI1517; phage(gi109289970)  1e-17  Click
35 1431341..1431667  PHAGE_Salmon_ST160: Gp13; NTHI1518; phage(gi318065943)  1e-08  Click
36 1431654..1432058  PHAGE_Entero_RB49: hypothetical protein RB49p102; NTHI1519; phage(gi33620489)  9e-30  Click
37 1432055..1432444  hypothetical protein; NTHI1520  N/A  Click
38 1432419..1432649  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_35; NTHI1521; phage(gi148727163)  8e-06  Click
39 1432658..1433617  PHAGE_Psychr_pOW20_A: DNA methylase; NTHI1522; phage(gi472339820)  5e-47  Click
40 1433596..1434015  PHAGE_Entero_phiFL3A: DNA adenine methyltransferase; NTHI1523; phage(gi281416249)  3e-32  Click
41 complement(1434012..1434233)  hypothetical protein; NTHI1525  N/A  Click
42 1434291..1434659  PHAGE_Lactob_Lj771: small terminase subunit; NTHI1526; phage(gi163932180)  5e-13  Click
43 1434673..1435989  PHAGE_Entero_Sf6: gene 2 protein; NTHI1527; phage(gi41057280)  1e-116  Click
44 1435991..1437307  PHAGE_Erwini_phiEt88: portal protein; NTHI1528; phage(gi327198564)  2e-42  Click
45 1437237..1438049  PHAGE_Erwini_phiEt88: phage putative head morphogenesis protein; NTHI1529; phage(gi327198565)  1e-27  Click
46 1438055..1439128  PHAGE_Erwini_phiEt88: hypothetical protein; NTHI1530; phage(gi327198566)  7e-61  Click
47 1439142..1439561  PHAGE_Xantho_vB_XveM_DIBBI: hypothetical protein; NTHI1531; phage(gi389060408)  4e-08  Click
48 1439569..1440570  PHAGE_Erwini_phiEt88: hypothetical protein; NTHI1532; phage(gi327198568)  3e-45  Click
49 1440573..1440761  hypothetical protein; NTHI1533  N/A  Click
50 1440765..1441115  hypothetical protein; NTHI1534  N/A  Click
51 1441108..1441566  PHAGE_Erwini_phiEt88: hypothetical protein; NTHI1535; phage(gi327198571)  1e-17  Click
52 1441566..1441925  PHAGE_Erwini_phiEt88: hypothetical protein; NTHI1536; phage(gi327198572)  2e-08  Click
53 1441927..1442436  PHAGE_Erwini_phiEt88: hypothetical protein; NTHI1537; phage(gi327198573)  7e-05  Click
54 1442423..1443496  PHAGE_Erwini_phiEt88: hypothetical protein; NTHI1538; phage(gi327198574)  1e-51  Click
55 1443542..1443967  PHAGE_Erwini_phiEt88: hypothetical protein; NTHI1539; phage(gi327198575)  7e-18  Click
56 1443967..1444449  hypothetical protein; NTHI1540  N/A  Click
57 1444485..1444637  hypothetical protein; NTHI1541  N/A  Click
58 1444634..1447051  PHAGE_Vibrio_vB_VpaS_MAR10: tail tape measure protein; NTHI1542; phage(gi428782128)  5e-39  Click
59 complement(1447126..1447698)  PHAGE_Salmon_vB_SemP_Emek: antirepressor; NTHI1543; phage(gi399498814)  2e-16  Click
60 1448006..1448587  PHAGE_Erwini_phiEt88: hypothetical protein; NTHI1544; phage(gi327198578)  3e-14  Click
61 1448584..1448898  PHAGE_Pseudo_KPP10: hypothetical protein; NTHI1546; phage(gi327198192)  7e-05  Click
62 1448895..1449851  PHAGE_Erwini_phiEt88: hypothetical protein; NTHI1547; phage(gi327198580)  3e-34  Click
63 1449854..1450525  PHAGE_Erwini_phiEt88: phage baseplate assembly protein V; NTHI1548; phage(gi327198581)  1e-21  Click
64 1450522..1450887  PHAGE_Pseudo_vB_PaeM_C2_10_Ab1: hypothetical protein; NTHI1549; phage(gi431810001)  2e-12  Click
65 1450880..1452316  PHAGE_Erwini_phiEt88: baseplate component; NTHI1550; phage(gi327198583)  1e-47  Click
66 1452325..1452939  PHAGE_Pseudo_PaP1: hypothetical protein; NTHI1551; phage(gi431809586)  5e-21  Click
67 1452949..1455297  PHAGE_Haemop_HP2: tail fibers; NTHI1552; phage(gi17981847)  0.0  Click
68 1455309..1455911  PHAGE_Haemop_HP2: tail collar; NTHI1553; phage(gi17981848)  3e-100  Click
69 1455908..1456408  PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; NTHI1554; phage(gi418489075)  1e-53  Click
70 1456474..1456923  PHAGE_Haemop_SuMu: hypothetical protein; NTHI1555; phage(gi418489077)  5e-64  Click
71 complement(1456962..1457225)  PHAGE_Haemop_SuMu: hypothetical protein; NTHI1556; phage(gi418489078)  4e-34  Click
72 1457605..1457621  attR    TCCAGCTAGTCGCACCA  N/A  Click
73 complement(1459009..1459290)  PHAGE_Pasteu_F108: Rep; NTHI1560; phage(gi109302908)  3e-10  Click
74 1459338..1459523  PHAGE_Haemop_SuMu: portal protein gp29; NTHI1561; phage(gi418489080)  2e-15  Click
75 1459583..1460251  PHAGE_Haemop_SuMu: MuF; NTHI1562; phage(gi418489084)  5e-65  Click
76 1460353..1460499  hypothetical protein; NTHI1563  N/A  Click
77 1460532..1461068  hypothetical protein; NTHI1564  N/A  Click
78 1461269..1461715  PHAGE_Megavi_chiliensis: putative Sel1-like repeat-containing protein; NTHI1565; phage(gi363539854)  8e-10  Click
79 1461715..1461891  hypothetical protein; NTHI1566  N/A  Click
80 1461903..1462562  PHAGE_Megavi_chiliensis: putative Sel1-like repeat-containing protein; NTHI1567; phage(gi363540607)  8e-20  Click
81 1462562..1462738  hypothetical protein; NTHI1568  N/A  Click
82 1462751..1463305  PHAGE_Megavi_chiliensis: putative Sel1-like repeat-containing protein; NTHI1569; phage(gi363539854)  2e-12  Click
83 1463305..1463481  hypothetical protein; NTHI1570  N/A  Click
84 1463494..1464045  PHAGE_Megavi_lba: putative Sel1-like repeat-containing protein; NTHI1571; phage(gi448826063)  7e-13  Click
85 1464321..1465406  PHAGE_Pseudo_73: hypothetical protein ORF037; NTHI1572; phage(gi148912865)  2e-09  Click
86 1465429..1465899  hypothetical protein; NTHI1573  N/A  Click
87 1465899..1466777  hypothetical protein; NTHI1574  N/A  Click
88 1466777..1467580  hypothetical protein; NTHI1575  N/A  Click
89 1467595..1468449  PHAGE_Cafete_BV_PW1: putative bifunctional KDO 8-P synthase/dTDP-6-deoxy-L-hexose 3-O-methyltransferase; NTHI1576; phage(gi310831256)  2e-47  Click
Region 2, total : 33 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1576217..1576229  attL    TTGCCATTTTTAA  N/A  Click
2 1576350..1576706  PHAGE_Mannhe_phiMHaA1: integrase; NTHI1711; phage(gi109289985)  7e-19  Click
3 complement(1576591..1576980)  hypothetical protein; NTHI1712  N/A  Click
4 complement(1577285..1577536)  PHAGE_Escher_TL_2011c: putative antirepressor; NTHI1713; phage(gi418487055)  2e-19  Click
5 complement(1577874..1579145)  PHAGE_Amsact_: hypothetical protein AMV156; NTHI1714; phage(gi9964470)  6e-06  Click
6 1579746..1579949  hypothetical protein; NTHI1715  N/A  Click
7 complement(1579927..1580085)  PHAGE_Aggreg_S1249: hypothetical protein; NTHI1716; phage(gi273809595)  4e-05  Click
8 complement(1580413..1580634)  hypothetical protein; NTHI1717  N/A  Click
9 complement(1581561..1581896)  hypothetical protein; NTHI1718  N/A  Click
10 complement(1581899..1582978)  hypothetical protein; NTHI1719  N/A  Click
11 complement(1583030..1583728)  PHAGE_Haemop_Aaphi23: putative CI protein; NTHI1720; phage(gi31544010)  8e-114  Click
12 1583839..1584027  PHAGE_Aggreg_S1249: phage protein; NTHI1721; phage(gi273809591)  6e-05  Click
13 1584076..1584516  PHAGE_Entero_mEp390: hypothetical protein; NTHI1722; phage(gi428782704)  3e-14  Click
14 1584565..1585239  PHAGE_Aggreg_S1249: uncharacterized phage-encoded protein; NTHI1723; phage(gi273809589)  5e-83  Click
15 1585236..1585994  PHAGE_Aggreg_S1249: replication protein; NTHI1724; phage(gi273809588)  4e-67  Click
16 1585979..1586620  PHAGE_Aggreg_S1249: possible bacteriophage replication protein P; NTHI1725; phage(gi273809587)  1e-21  Click
17 1586617..1586841  hypothetical protein; NTHI1726  N/A  Click
18 1586878..1587294  PHAGE_Aggreg_S1249: putative recombination protein NinB; NTHI1727; phage(gi273809585)  2e-66  Click
19 1587562..1587951  PHAGE_Aggreg_S1249: NinG recombination protein; NTHI1728_1; phage(gi273809581)  5e-25  Click
20 1587971..1588600  PHAGE_Thalas_BA3: hypothetical protein BA3_0046; NTHI1729; phage(gi160700640)  9e-31  Click
21 1588724..1589002  hypothetical protein; NTHI1730  N/A  Click
22 complement(1589052..1590029)  PHAGE_Entero_4795: hypothetical protein PBV4795_ORF33; NTHI1731; phage(gi157166018)  2e-94  Click
23 1590258..1591043  PHAGE_Aggreg_S1249: possible bacteriophage antirepressor; NTHI1733; phage(gi273809598)  1e-68  Click
24 1591074..1591256  hypothetical protein; NTHI1734  N/A  Click
25 1591380..1591736  PHAGE_Aeromo_phiO18P: putative holin; NTHI1735; phage(gi148727161)  1e-05  Click
26 1591816..1592307  PHAGE_Aggreg_S1249: putative Lys protein; NTHI1736; phage(gi273809575)  4e-48  Click
27 1592300..1592623  PHAGE_Aggreg_S1249: putative lytic protein Rz; NTHI1737; phage(gi273809574)  6e-26  Click
28 1592535..1592816  PHAGE_Aggreg_S1249: putative lytic protein Rz1; NTHI1738; phage(gi273809573)  3e-27  Click
29 complement(1592818..1593096)  hypothetical protein; NTHI1739  N/A  Click
30 1593141..1593653  PHAGE_Acinet_AP22: putative phage terminase small subunit; NTHI1740; phage(gi388570782)  8e-23  Click
31 1593640..1594983  PHAGE_Psychr_pOW20_A: phage terminase large subunit; NTHI1741; phage(gi472339822)  8e-96  Click
32 1594985..1596319  PHAGE_Aggreg_S1249: phage-related protein HI1409; NTHI1742; phage(gi273809569)  0.0  Click
33 1596348..1597529  PHAGE_Aggreg_S1249: putative minor head protein; NTHI1743; phage(gi273809568)  3e-90  Click
34 1597675..1597851  PHAGE_Aggreg_S1249: hypothetical protein; NTHI1744; phage(gi273809565)  4e-24  Click
35 1610982..1610994  attR    TTGCCATTTTTAA  N/A  Click
Region 3, total : 31 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1707312..1707815)  PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; NTHI1855; phage(gi418489075)  6e-52  Click
2 complement(1707812..1708414)  PHAGE_Haemop_HP2: tail collar; NTHI1856; phage(gi17981848)  1e-99  Click
3 complement(1708426..1710948)  PHAGE_Mannhe_phiMHaA1: variable tail fiber protein H; NTHI1857; phage(gi109289958)  7e-41  Click
4 complement(1710957..1711493)  PHAGE_Mannhe_phiMHaA1: tail formation protein I; NTHI1858; phage(gi109289957)  1e-50  Click
5 complement(1711483..1712397)  PHAGE_Mannhe_phiMHaA1: baseplate assembly protein J; NTHI1860; phage(gi109289956)  9e-98  Click
6 complement(1712394..1712732)  PHAGE_Mannhe_phiMHaA1: baseplate assembly protein W; NTHI1861; phage(gi109289955)  4e-21  Click
7 complement(1712734..1713333)  PHAGE_Mannhe_phiMHaA1: baseplate assembly protein V; NTHI1862; phage(gi109289954)  2e-62  Click
8 complement(1713437..1713865)  hypothetical protein; NTHI1863  N/A  Click
9 complement(1713874..1714431)  hypothetical protein; NTHI1864  N/A  Click
10 complement(1714529..1714981)  hypothetical protein; NTHI1865  N/A  Click
11 complement(1714959..1715159)  hypothetical protein; NTHI1866  N/A  Click
12 complement(1715203..1717167)  PHAGE_Mannhe_phiMHaA1: tail protein T; NTHI1867; phage(gi109289951)  4e-70  Click
13 complement(1717210..1717977)  PHAGE_Entero_2: P2 gpT-like tail protein; NTHI1869; phage(gi169936021)  1e-32  Click
14 1718022..1718360  hypothetical protein; NTHI1870  N/A  Click
15 complement(1718371..1718553)  PHAGE_Mannhe_phiMHaA1: tail synthesis protein S; NTHI1871; phage(gi109289949)  2e-07  Click
16 1718657..1719004  hypothetical protein; NTHI1872  N/A  Click
17 complement(1719005..1719466)  PHAGE_Mannhe_phiMHaA1: tail synthesis protein S; NTHI1873; phage(gi109289949)  7e-28  Click
18 complement(1719466..1719852)  PROPHAGE_Salmon_Ty2: putative phage tail protein; NTHI1874; phage(gi29143748)  1e-24  Click
19 complement(1719902..1720009)  hypothetical protein; NTHI1875  N/A  Click
20 complement(1720042..1720164)  hypothetical protein; NTHI1876  N/A  Click
21 complement(1720161..1720376)  PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p11; NTHI1878; phage(gi109289947)  2e-13  Click
22 complement(1720551..1720901)  PHAGE_Haemop_HP1: hypothetical protein HP1p32; NTHI1879; phage(gi9628631)  5e-05  Click
23 complement(1720886..1721404)  PHAGE_Mannhe_phiMHaA1: endolysin; NTHI1880; phage(gi109289945)  2e-38  Click
24 complement(1721397..1721618)  PHAGE_Mannhe_phiMHaA1: possible holin; NTHI1881; phage(gi109289944)  7e-05  Click
25 complement(1721620..1721829)  PHAGE_Mannhe_phiMHaA1: tail synthesis protein X; NTHI1882; phage(gi109289943)  1e-11  Click
26 complement(1721829..1722335)  PHAGE_Mannhe_phiMHaA1: head completion protein L; NTHI1883; phage(gi109289942)  5e-36  Click
27 complement(1722629..1723279)  PHAGE_Mannhe_phiMHaA1: terminase small subunit; NTHI1884; phage(gi109289941)  4e-47  Click
28 complement(1723291..1724340)  PHAGE_Mannhe_phiMHaA1: major capsid protein N; NTHI1885; phage(gi109289940)  3e-91  Click
29 complement(1724361..1725176)  PHAGE_Mannhe_phiMHaA1: capsid scaffolding protein O; NTHI1887; phage(gi109289939)  2e-73  Click
30 1725341..1727122  PHAGE_Mannhe_phiMHaA1: terminase ATPase subunit; NTHI1888; phage(gi109289938)  0.0  Click
31 1727132..1728142  PHAGE_Mannhe_phiMHaA1: capsid portal protein Q; NTHI1890; phage(gi109289937)  4e-118  Click