| Definition | Salmonella enterica subsp. enterica serovar Choleraesuis str. SC-B67 chromosome, complete genome. |
|---|---|
| Accession | NC_006905 |
| Length | 4,755,700 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 42 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(372847..374010) | PHAGE_Entero_ST64T: Int; SC0324; phage(gi24371538) | 0.0 | Click |
| 2 | complement(374240..374875) | PHAGE_Entero_P22: EaC; SC0325; phage(gi51236732) | 4e-111 | Click |
| 3 | complement(374946..376121) | PHAGE_Entero_P22: EaA; SC0326; phage(gi9635497) | 2e-47 | Click |
| 4 | complement(376118..376579) | hypothetical protein; SC0327 | N/A | Click |
| 5 | complement(376576..377097) | PHAGE_Salmon_ST64B: hypothetical protein sb33; SC0328; phage(gi23505477) | 2e-96 | Click |
| 6 | complement(377094..377327) | hypothetical protein; SC0329 | N/A | Click |
| 7 | complement(377324..377701) | PHAGE_Salmon_vB_SosS_Oslo: EaE protein; SC0330; phage(gi399528796) | 2e-60 | Click |
| 8 | complement(378809..379357) | PHAGE_Salmon_epsilon34: putative exodeoxyribonuclease VIII; SC0331; phage(gi221328652) | 1e-100 | Click |
| 9 | complement(379366..379872) | PHAGE_Salmon_epsilon34: SSB; Single-strand binding protein; SC0332; phage(gi221328653) | 1e-89 | Click |
| 10 | complement(379873..380580) | PHAGE_Entero_IME10: ORF252; SC0333; phage(gi422934293) | 2e-132 | Click |
| 11 | complement(380710..380898) | PHAGE_Salmon_vB_SosS_Oslo: Kil protein; SC0334; phage(gi399528802) | 8e-33 | Click |
| 12 | complement(380879..381052) | PHAGE_Entero_ST104: C3; SC0335; phage(gi46358663) | 8e-25 | Click |
| 13 | complement(381244..381444) | PHAGE_Vibrio_12B3: hypothetical protein; SC0336; phage(gi481018988) | 1e-07 | Click |
| 14 | complement(381513..381770) | PHAGE_Entero_ES18: gp53; SC0337; phage(gi62362266) | 6e-36 | Click |
| 15 | complement(382199..382501) | PHAGE_Salmon_vB_SemP_Emek: antitermination protein; SC0338; phage(gi399498835) | 3e-48 | Click |
| 16 | 383603..383818 | PHAGE_Entero_HK633: prophage antirepressor; SC0339; phage(gi428782568) | 2e-22 | Click |
| 17 | 384386..385234 | PHAGE_Salmon_epsilon34: putative replication protein O; SC0340; phage(gi221328668) | 5e-162 | Click |
| 18 | 385342..387222 | PHAGE_Salmon_vB_SosS_Oslo: DNA primase/helicase; SC0341; phage(gi399528819) | 0.0 | Click |
| 19 | 388012..388884 | PHAGE_Entero_lambda: NinC protein; SC0342; phage(gi9626299) | 2e-175 | Click |
| 20 | complement(388943..389278) | hypothetical protein; SC0343 | N/A | Click |
| 21 | 389632..390027 | PHAGE_Entero_ST64T: Rus; SC0344; phage(gi24371573) | 9e-72 | Click |
| 22 | 390208..390387 | PHAGE_Salmon_vB_SosS_Oslo: NinZ protein; SC0345; phage(gi399528831) | 9e-27 | Click |
| 23 | 390384..390902 | PHAGE_Salmon_ST160: Gp23; SC0346; phage(gi318065942) | 4e-94 | Click |
| 24 | 390965..391039 | tRNA | N/A | Click |
| 25 | 391045..391120 | tRNA | N/A | Click |
| 26 | 391363..391686 | PHAGE_Entero_IME10: holin; SC0347; phage(gi422934276) | 2e-55 | Click |
| 27 | complement(391561..391683) | hypothetical protein; SC0348 | N/A | Click |
| 28 | 391670..392146 | PHAGE_Escher_HK75: lysozyme; SC0349; phage(gi356870730) | 5e-88 | Click |
| 29 | 392143..392580 | PHAGE_Entero_IME10: Rz lysis protein; SC0350; phage(gi422934278) | 5e-75 | Click |
| 30 | 392786..393274 | PHAGE_Entero_HK106: hypothetical protein; SC0352; phage(gi428783343) | 2e-88 | Click |
| 31 | 393765..394007 | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; SC0353; phage(gi399498861) | 6e-39 | Click |
| 32 | 394509..396008 | PHAGE_Entero_IME10: terminase large subunit; SC0354; phage(gi422934280) | 0.0 | Click |
| 33 | 396009..398174 | PHAGE_Entero_IME10: portal protein; SC0355; phage(gi422934281) | 0.0 | Click |
| 34 | 398188..399099 | PHAGE_Entero_IME10: scaffolding protein; SC0356; phage(gi422934282) | 1e-167 | Click |
| 35 | 399099..400394 | PHAGE_Entero_IME10: coat protein; SC0357; phage(gi422934283) | 0.0 | Click |
| 36 | 400653..401153 | PHAGE_Entero_IME10: DNA stabilization protein; SC0358; phage(gi422934284) | 6e-92 | Click |
| 37 | 401154..402572 | PHAGE_Entero_IME10: DNA stabilization protein; SC0359; phage(gi422934285) | 0.0 | Click |
| 38 | 402576..403214 | PHAGE_Entero_P22: head completion protein; SC0360; phage(gi51236728) | 1e-76 | Click |
| 39 | 403214..403669 | PHAGE_Salmon_epsilon34: Virion assembly protein; SC0361; phage(gi221328628) | 2e-86 | Click |
| 40 | 403672..404361 | PHAGE_Entero_IME10: DNA transfer protein; SC0362; phage(gi422934288) | 2e-87 | Click |
| 41 | 404404..405723 | PHAGE_Entero_P22: injection protein; SC0363; phage(gi9635545) | 1e-145 | Click |
| 42 | 405723..407636 | PHAGE_Entero_P22: injection protein; SC0364; phage(gi51236731) | 0.0 | Click |
| 43 | complement(407654..407983) | hypothetical protein; SC0366 | N/A | Click |
| 44 | 408223..409983 | PHAGE_Salmon_vB_SemP_Emek: tailspike protein; SC0367; phage(gi399498815) | 1e-58 | Click |
Region 2, total : 9 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 988949..988962 | attL TTTCCGCCAGCTCA | N/A | Click |
| 2 | 1000882..1002540 | PHAGE_Entero_P2: Old; SC0894; phage(gi9630369) | 8e-06 | Click |
| 3 | complement(1002537..1003505) | virK; SC0895 | N/A | Click |
| 4 | 1003633..1004751 | PHAGE_Cronob_ENT47670: putative tail protein; SC0896; phage(gi431810494) | 4e-05 | Click |
| 5 | 1004748..1006694 | PHAGE_Plankt_PaV_LD: ABC transporter; SC0897; phage(gi371496158) | 5e-41 | Click |
| 6 | complement(1006824..1007045) | PHAGE_Lactoc_bIL312: Csp; SC0898; phage(gi13095918) | 5e-14 | Click |
| 7 | 1007369..1007689 | PHAGE_Cronob_vB_CsaM_GAP32: ATP-dependent Clp protease; SC0899; phage(gi414087232) | 3e-05 | Click |
| 8 | 1007720..1009996 | PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; SC0900; phage(gi15800640) | 0.0 | Click |
| 9 | complement(1010209..1010406) | hypothetical protein; SC0901 | N/A | Click |
| 10 | complement(1010568..1010945) | PROPHAGE_Escher_CFT073: P4 family integrase; SC0902; phage(gi26248244) | 2e-48 | Click |
| 11 | 1018013..1018026 | attR TTTCCGCCAGCTCA | N/A | Click |
Region 3, total : 38 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1083457..1083471 | attL TTATAAAAATGTAGC | N/A | Click |
| 2 | complement(1083517..1084794) | PHAGE_Gifsy_2: bacteriophage integrase; SC0963; phage(gi169257268) | 0.0 | Click |
| 3 | complement(1085129..1085368) | PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; SC0964; phage(gi169257270) | 7e-40 | Click |
| 4 | complement(1085411..1086568) | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SC0965; phage(gi169257271) | 0.0 | Click |
| 5 | complement(1087793..1088206) | PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; SC0966; phage(gi169257272) | 7e-52 | Click |
| 6 | complement(1089583..1089933) | PHAGE_Gifsy_2: hypothetical protein STM1010.Gifsy2; SC0967; phage(gi169257273) | 1e-35 | Click |
| 7 | complement(1089955..1090113) | PHAGE_Gifsy_2: hypothetical protein STM1010.1n.Gifsy2; SC0968; phage(gi169257274) | 3e-24 | Click |
| 8 | complement(1090106..1090222) | PHAGE_Gifsy_2: hypothetical protein STM1010.2n.Gifsy2; SC0969; phage(gi169257275) | 3e-15 | Click |
| 9 | 1090512..1090718 | PHAGE_Entero_HK225: hypothetical protein; SC0970; phage(gi428782417) | 3e-19 | Click |
| 10 | complement(1090751..1091683) | PHAGE_Entero_mEpX1: hypothetical protein; SC0971; phage(gi428781913) | 4e-91 | Click |
| 11 | complement(1091680..1092153) | PHAGE_Entero_mEpX1: hypothetical protein; SC0972; phage(gi428781914) | 2e-52 | Click |
| 12 | complement(1092304..1092771) | PHAGE_Entero_mEp237: prophage repressor; SC0973; phage(gi435439304) | 3e-71 | Click |
| 13 | 1092942..1093352 | PHAGE_Gifsy_2: bacteriophage transcriptional activator; Lambda gpCII analog; SC0974; phage(gi169257278) | 1e-54 | Click |
| 14 | 1093444..1094280 | PHAGE_Gifsy_2: bacteriophage DNA replication protein; Lambda gpo homolog; SC0975; phage(gi169257279) | 3e-39 | Click |
| 15 | 1094277..1094972 | PHAGE_Escher_HK639: replication protein 14; SC0976; phage(gi356870655) | 5e-58 | Click |
| 16 | 1094986..1095783 | PHAGE_Entero_P22: EaA; SC0977; phage(gi9635497) | 5e-30 | Click |
| 17 | 1096303..1096542 | PHAGE_Gifsy_2: bacteriophage damage-inducible protein DinI; SC0978; phage(gi169257284) | 1e-37 | Click |
| 18 | 1096877..1097479 | PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; SC0979; phage(gi169257286) | 1e-110 | Click |
| 19 | 1097485..1097685 | PHAGE_Gifsy_2: hypothetical protein STM1021.1n.Gifsy2; SC0980; phage(gi169257287) | 1e-35 | Click |
| 20 | 1097688..1098299 | PHAGE_Gifsy_2: NinG; SC0981; phage(gi169257288) | 1e-113 | Click |
| 21 | 1098296..1098436 | PHAGE_Gifsy_2: hypothetical protein STM1022.1n.Gifsy2; SC0982; phage(gi169257289) | 3e-10 | Click |
| 22 | 1098433..1099113 | PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; SC0983; phage(gi169257244) | 9e-102 | Click |
| 23 | complement(1099234..1099920) | PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; SC0984; phage(gi169257294) | 2e-133 | Click |
| 24 | 1100190..1100525 | PHAGE_Gifsy_2: bacteriophage lysis protein; holin; SC0985; phage(gi169257295) | 1e-58 | Click |
| 25 | 1100512..1100961 | PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; SC0986; phage(gi169257296) | 6e-82 | Click |
| 26 | 1100979..1101458 | PHAGE_Gifsy_2: bacteriophage lysis protein; Lambda gpRz homolog; SC0987; phage(gi169257297) | 3e-85 | Click |
| 27 | 1101615..1102040 | PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, small subunit; SC0988; phage(gi169257298) | 4e-58 | Click |
| 28 | complement(1102673..1102810) | hypothetical protein; SC0989 | N/A | Click |
| 29 | 1104132..1104338 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SC0990; phage(gi169257300) | 1e-31 | Click |
| 30 | 1104335..1105864 | PHAGE_Gifsy_2: bacteriophage portal protein; SC0991; phage(gi169257301) | 4e-179 | Click |
| 31 | 1105910..1106308 | PHAGE_Gifsy_2: bacteriophage tail assembly chaperone; Lambda gpG homolog; SC0992; phage(gi169257308) | 8e-70 | Click |
| 32 | 1106383..1106634 | PHAGE_Gifsy_2: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein ; Lambda gpT homolog; SC0993; phage(gi169257309) | 8e-41 | Click |
| 33 | 1106648..1109701 | PHAGE_Gifsy_2: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; SC0994; phage(gi169257310) | 0.0 | Click |
| 34 | 1109698..1110030 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpM homolog; SC0995; phage(gi169257311) | 9e-61 | Click |
| 35 | 1110129..1110626 | PHAGE_Gifsy_2: bacteriophage virulence determinant; Lom homolog; SC0996; phage(gi169257312) | 3e-93 | Click |
| 36 | complement(1110743..1111276) | PHAGE_Gifsy_2: bacteriophage virulence determinant; superoxide dismutase precursor; SC0997; phage(gi169257313) | 3e-102 | Click |
| 37 | 1111366..1112061 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpL homolog; SC0998; phage(gi169257314) | 4e-135 | Click |
| 38 | 1112071..1112808 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpK homolog; SC0999; phage(gi169257315) | 3e-152 | Click |
| 39 | 1112745..1113410 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpI homolog; SC1000; phage(gi169257316) | 4e-121 | Click |
| 40 | 1124633..1124647 | attR TTATAAAAATGTAGC | N/A | Click |
Region 4, total : 47 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1083457..1083471 | attL TTATAAAAATGTAGC | N/A | Click |
| 2 | complement(1083517..1084794) | PHAGE_Gifsy_2: bacteriophage integrase; SC0963; phage(gi169257268) | 0.0 | Click |
| 3 | complement(1085129..1085368) | PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; SC0964; phage(gi169257270) | 7e-40 | Click |
| 4 | complement(1085411..1086568) | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SC0965; phage(gi169257271) | 0.0 | Click |
| 5 | complement(1087793..1088206) | PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; SC0966; phage(gi169257272) | 7e-52 | Click |
| 6 | complement(1089583..1089933) | PHAGE_Gifsy_2: hypothetical protein STM1010.Gifsy2; SC0967; phage(gi169257273) | 1e-35 | Click |
| 7 | complement(1089955..1090113) | PHAGE_Gifsy_2: hypothetical protein STM1010.1n.Gifsy2; SC0968; phage(gi169257274) | 3e-24 | Click |
| 8 | complement(1090106..1090222) | PHAGE_Gifsy_2: hypothetical protein STM1010.2n.Gifsy2; SC0969; phage(gi169257275) | 3e-15 | Click |
| 9 | 1090512..1090718 | PHAGE_Entero_HK225: hypothetical protein; SC0970; phage(gi428782417) | 3e-19 | Click |
| 10 | complement(1090751..1091683) | PHAGE_Entero_mEpX1: hypothetical protein; SC0971; phage(gi428781913) | 4e-91 | Click |
| 11 | complement(1091680..1092153) | PHAGE_Entero_mEpX1: hypothetical protein; SC0972; phage(gi428781914) | 2e-52 | Click |
| 12 | complement(1092304..1092771) | PHAGE_Entero_mEp237: prophage repressor; SC0973; phage(gi435439304) | 3e-71 | Click |
| 13 | 1092942..1093352 | PHAGE_Gifsy_2: bacteriophage transcriptional activator; Lambda gpCII analog; SC0974; phage(gi169257278) | 1e-54 | Click |
| 14 | 1093444..1094280 | PHAGE_Gifsy_2: bacteriophage DNA replication protein; Lambda gpo homolog; SC0975; phage(gi169257279) | 3e-39 | Click |
| 15 | 1094277..1094972 | PHAGE_Escher_HK639: replication protein 14; SC0976; phage(gi356870655) | 5e-58 | Click |
| 16 | 1094986..1095783 | PHAGE_Entero_P22: EaA; SC0977; phage(gi9635497) | 5e-30 | Click |
| 17 | 1096303..1096542 | PHAGE_Gifsy_2: bacteriophage damage-inducible protein DinI; SC0978; phage(gi169257284) | 1e-37 | Click |
| 18 | 1096877..1097479 | PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; SC0979; phage(gi169257286) | 1e-110 | Click |
| 19 | 1097485..1097685 | PHAGE_Gifsy_2: hypothetical protein STM1021.1n.Gifsy2; SC0980; phage(gi169257287) | 1e-35 | Click |
| 20 | 1097688..1098299 | PHAGE_Gifsy_2: NinG; SC0981; phage(gi169257288) | 1e-113 | Click |
| 21 | 1098296..1098436 | PHAGE_Gifsy_2: hypothetical protein STM1022.1n.Gifsy2; SC0982; phage(gi169257289) | 3e-10 | Click |
| 22 | 1098433..1099113 | PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; SC0983; phage(gi169257244) | 9e-102 | Click |
| 23 | complement(1099234..1099920) | PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; SC0984; phage(gi169257294) | 2e-133 | Click |
| 24 | 1100190..1100525 | PHAGE_Gifsy_2: bacteriophage lysis protein; holin; SC0985; phage(gi169257295) | 1e-58 | Click |
| 25 | 1100512..1100961 | PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; SC0986; phage(gi169257296) | 6e-82 | Click |
| 26 | 1100979..1101458 | PHAGE_Gifsy_2: bacteriophage lysis protein; Lambda gpRz homolog; SC0987; phage(gi169257297) | 3e-85 | Click |
| 27 | 1101615..1102040 | PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, small subunit; SC0988; phage(gi169257298) | 4e-58 | Click |
| 28 | complement(1102673..1102810) | hypothetical protein; SC0989 | N/A | Click |
| 29 | 1104132..1104338 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SC0990; phage(gi169257300) | 1e-31 | Click |
| 30 | 1104335..1105864 | PHAGE_Gifsy_2: bacteriophage portal protein; SC0991; phage(gi169257301) | 4e-179 | Click |
| 31 | 1105910..1106308 | PHAGE_Gifsy_2: bacteriophage tail assembly chaperone; Lambda gpG homolog; SC0992; phage(gi169257308) | 8e-70 | Click |
| 32 | 1106383..1106634 | PHAGE_Gifsy_2: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein ; Lambda gpT homolog; SC0993; phage(gi169257309) | 8e-41 | Click |
| 33 | 1106648..1109701 | PHAGE_Gifsy_2: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; SC0994; phage(gi169257310) | 0.0 | Click |
| 34 | 1109698..1110030 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpM homolog; SC0995; phage(gi169257311) | 9e-61 | Click |
| 35 | 1110129..1110626 | PHAGE_Gifsy_2: bacteriophage virulence determinant; Lom homolog; SC0996; phage(gi169257312) | 3e-93 | Click |
| 36 | complement(1110743..1111276) | PHAGE_Gifsy_2: bacteriophage virulence determinant; superoxide dismutase precursor; SC0997; phage(gi169257313) | 3e-102 | Click |
| 37 | 1111366..1112061 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpL homolog; SC0998; phage(gi169257314) | 4e-135 | Click |
| 38 | 1112071..1112808 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpK homolog; SC0999; phage(gi169257315) | 3e-152 | Click |
| 39 | 1112745..1113410 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpI homolog; SC1000; phage(gi169257316) | 4e-121 | Click |
| 40 | 1116870..1117112 | PHAGE_Gifsy_2: hypothetical protein STM1049.2n.Gifsy2; SC1001; phage(gi169257319) | 3e-40 | Click |
| 41 | 1117166..1119604 | PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; SC1002; phage(gi169257320) | 0.0 | Click |
| 42 | 1119604..1120185 | PHAGE_Gifsy_2: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; SC1003; phage(gi169257321) | 3e-111 | Click |
| 43 | 1120768..1121628 | PHAGE_Gifsy_2: prophage virulence determinant; secreted effector protein; SC1004; phage(gi169257322) | 2e-168 | Click |
| 44 | 1121821..1122069 | PHAGE_Stx2_c_1717: transposase; SC1005; phage(gi209447153) | 3e-26 | Click |
| 45 | complement(1122201..1122827) | PHAGE_Pseudo_F116: hypothetical protein F116p67; SC1006; phage(gi56692976) | 7e-31 | Click |
| 46 | 1122803..1122958 | hypothetical protein; SC1007 | N/A | Click |
| 47 | complement(1123180..1123866) | Gifsy-2 prophage protein; SC1008 | N/A | Click |
| 48 | complement(1124136..1124402) | PHAGE_Entero_mEp390: DinI-like family protein; SC1009; phage(gi428782688) | 6e-25 | Click |
| 49 | 1124633..1124647 | attR TTATAAAAATGTAGC | N/A | Click |
Region 5, total : 52 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1304586..1304915) | PHAGE_Aeromo_CC2: hypothetical protein; SC1187; phage(gi423261545) | 9e-08 | Click |
| 2 | complement(1304912..1305571) | putative ribosomal large subunit pseudouridine synthase; SC1188 | N/A | Click |
| 3 | 1305665..1306915 | isocitrate dehydrogenase; SC1189 | N/A | Click |
| 4 | 1307007..1307025 | attL TTTATCAAAACTCCCTCAA | N/A | Click |
| 5 | complement(1307027..1308154) | PHAGE_Entero_mEp235: integrase; SC1190; phage(gi428781836) | 8e-57 | Click |
| 6 | 1308400..1309608 | PROPHAGE_Shewan_MR-1: ISSod3, transposase; SC1191; phage(gi24375070) | 1e-125 | Click |
| 7 | complement(1309795..1309944) | PHAGE_Salmon_ST64B: hypothetical protein sb35; SC1192; phage(gi23505479) | 5e-11 | Click |
| 8 | complement(1310081..1310908) | PHAGE_Salmon_ST64B: hypothetical protein sb36; SC1193; phage(gi23505480) | 3e-152 | Click |
| 9 | complement(1310966..1311322) | PHAGE_Salmon_ST64B: hypothetical protein sb37; SC1194; phage(gi23505481) | 3e-63 | Click |
| 10 | 1311443..1311928 | hypothetical protein; SC1195 | N/A | Click |
| 11 | complement(1312329..1313108) | PHAGE_Salmon_ST64B: regulatory protein; SC1196; phage(gi23505482) | 2e-123 | Click |
| 12 | 1313459..1314013 | PHAGE_Entero_cdtI: hypothetical protein PcdtI_gp43; SC1197; phage(gi148609425) | 6e-70 | Click |
| 13 | 1314010..1316490 | PHAGE_Salmon_ST64B: putative antirepressor; SC1198; phage(gi23505485) | 4e-114 | Click |
| 14 | complement(1314348..1314656) | PHAGE_Entero_N15: gp48; SC1200; phage(gi9630515) | 2e-07 | Click |
| 15 | 1316708..1317526 | PHAGE_Salmon_ST64B: putative replication protein; SC1201; phage(gi23505486) | 1e-153 | Click |
| 16 | 1318010..1318663 | PHAGE_Entero_cdtI: putative DNA adenine methylase; SC1202; phage(gi148609429) | 5e-114 | Click |
| 17 | 1318660..1319049 | PHAGE_Entero_mEp460: holliday junction resolvase; SC1203; phage(gi428782363) | 1e-62 | Click |
| 18 | 1319066..1319926 | PHAGE_Salmon_ST64B: hypothetical protein sb46; SC1204; phage(gi23505490) | 3e-162 | Click |
| 19 | 1319934..1320923 | PHAGE_Entero_mEp460: hypothetical protein; SC1205; phage(gi428782365) | 4e-174 | Click |
| 20 | 1320938..1321516 | hypothetical protein; SC1206 | N/A | Click |
| 21 | 1321742..1322161 | PHAGE_Entero_mEp460: hypothetical protein; SC1207; phage(gi428782367) | 4e-60 | Click |
| 22 | 1322370..1322552 | PHAGE_Entero_mEp460: DNA methylase; SC1208; phage(gi428782369) | 3e-18 | Click |
| 23 | 1322662..1323051 | PHAGE_Entero_mEp390: putative holin; SC1209; phage(gi428782712) | 1e-46 | Click |
| 24 | 1323038..1323319 | PHAGE_Entero_mEp390: putative holin; SC1210; phage(gi428782713) | 9e-40 | Click |
| 25 | 1323319..1323933 | PHAGE_Salmon_1: putative bacteriophage endolysin; SC1211; phage(gi169257182) | 4e-110 | Click |
| 26 | 1323930..1324472 | PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; SC1212; phage(gi16765210) | 3e-17 | Click |
| 27 | 1324527..1325078 | hypothetical protein; SC1213 | N/A | Click |
| 28 | 1325337..1325882 | PHAGE_Gifsy_1: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; SC1214; phage(gi169257236) | 9e-87 | Click |
| 29 | 1325854..1327785 | PHAGE_Gifsy_1: DNA packaging protein; large terminase subunit; Lambda gpA homolog; SC1215; phage(gi169257235) | 0.0 | Click |
| 30 | 1327769..1327972 | PHAGE_Gifsy_1: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; SC1216; phage(gi169257234) | 2e-31 | Click |
| 31 | 1327969..1329549 | PHAGE_Gifsy_1: bacteriophage portal protein; Lambda gpB homolog; SC1217; phage(gi169257233) | 0.0 | Click |
| 32 | 1329539..1331035 | PHAGE_Gifsy_1: bacteriophage prohead protease; Lambda gpC homolog; SC1218; phage(gi169257232) | 0.0 | Click |
| 33 | 1331048..1331395 | PHAGE_Gifsy_1: bacteriophage head decoration protein; Lambda gpD homolog; SC1219; phage(gi169257231) | 4e-60 | Click |
| 34 | 1331450..1332478 | PHAGE_Gifsy_1: bacteriophage major capsid protein; Lambda gpE homolog; SC1220; phage(gi169257230) | 0.0 | Click |
| 35 | 1332536..1332895 | PHAGE_Gifsy_1: bacteriophage accessory DNA packaging protein; Lambda FI homolog; SC1221; phage(gi169257229) | 3e-59 | Click |
| 36 | 1332906..1333289 | PHAGE_Gifsy_1: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; SC1222; phage(gi169257228) | 2e-66 | Click |
| 37 | complement(1333322..1334452) | PHAGE_Gifsy_1: transposase; SC1223; phage(gi169257226) | 0.0 | Click |
| 38 | 1334558..1335136 | PHAGE_Gifsy_1: bacteriophage head-tail assembly protein; Lambda gpZ homolog; SC1224; phage(gi169257227) | 7e-104 | Click |
| 39 | 1335133..1335534 | PHAGE_Gifsy_1: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; SC1225; phage(gi169257225) | 2e-73 | Click |
| 40 | 1335545..1336288 | PHAGE_Gifsy_1: bacteriophage major tail subunit; Lambda gpV homolog; SC1226; phage(gi169257224) | 5e-138 | Click |
| 41 | 1336339..1336734 | PHAGE_Gifsy_1: bacteriophage tail assembly chaperone; Lambda gpG homolog; SC1227; phage(gi169257223) | 2e-70 | Click |
| 42 | 1336755..1337069 | PHAGE_Gifsy_1: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; SC1228; phage(gi169257222) | 1e-55 | Click |
| 43 | 1337041..1340082 | PHAGE_Gifsy_1: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; SC1229; phage(gi169257221) | 0.0 | Click |
| 44 | 1340085..1340414 | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpM homolog; SC1230; phage(gi169257220) | 7e-61 | Click |
| 45 | 1340424..1341122 | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpL homolog; SC1231; phage(gi169257219) | 1e-134 | Click |
| 46 | 1341312..1341866 | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpK homolog; SC1232; phage(gi169257218) | 1e-111 | Click |
| 47 | 1341905..1342411 | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpI homolog; SC1233; phage(gi169257217) | 1e-92 | Click |
| 48 | 1342474..1345836 | PHAGE_Gifsy_1: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; SC1234; phage(gi169257216) | 0.0 | Click |
| 49 | 1345875..1346117 | PHAGE_Gifsy_1: hypothetical protein STM2589.1n.Gifsy1; SC1235; phage(gi169257215) | 1e-38 | Click |
| 50 | 1346171..1348849 | PHAGE_Gifsy_1: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; SC1236; phage(gi169257214) | 0.0 | Click |
| 51 | complement(1346587..1347102) | PHAGE_Entero_lambda: hypothetical protein lambdap90; SC1237; phage(gi9626267) | 1e-19 | Click |
| 52 | 1350481..1350789 | PHAGE_Entero_mEp390: hypothetical protein; SC1240; phage(gi428782690) | 3e-26 | Click |
| 53 | complement(1350920..1351990) | PHAGE_Yersin_PY54: partitioning protein SpyB; SC1241; phage(gi33770536) | 8e-120 | Click |
| 54 | 1357344..1357362 | attR TTTATCAAAACTCCCTCAA | N/A | Click |
Region 6, total : 11 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(1987290..1987865) | PHAGE_Pseudo_Lu11: putative tail assembly protein; SC1873; phage(gi388684690) | 6e-16 | Click |
| 2 | complement(1987953..1988135) | PHAGE_Entero_HK106: tail fiber assembly protein; SC1874; phage(gi428783304) | 3e-05 | Click |
| 3 | 1988187..1988201 | attL AAATACAGCAATATG | N/A | Click |
| 4 | complement(1988215..1988508) | hypothetical protein; SC1875 | N/A | Click |
| 5 | 1988441..1989181 | PHAGE_Entero_HK106: integrase; SC1876; phage(gi428783305) | 4e-43 | Click |
| 6 | complement(1989378..1989494) | hypothetical protein; SC1877 | N/A | Click |
| 7 | complement(1989555..1989908) | PHAGE_Entero_PsP3: gp28; SC1878; phage(gi41057381) | 4e-08 | Click |
| 8 | complement(1989925..1990800) | putative inner membrane protein; SC1879 | N/A | Click |
| 9 | complement(1990801..1991175) | hypothetical protein; SC1880 | N/A | Click |
| 10 | 1991313..1991543 | PHAGE_Pectob_ZF40: putative DNA polymerase; SC1881; phage(gi422936677) | 6e-17 | Click |
| 11 | 1991651..1992307 | hypothetical protein; SC1882 | N/A | Click |
| 12 | 1992331..1993029 | PHAGE_Cronob_vB_CsaM_GAP32: putative DNA polymerase III epsilon subunit; SC1883; phage(gi414087193) | 2e-15 | Click |
| 13 | 1992661..1992675 | attR AAATACAGCAATATG | N/A | Click |
Region 7, total : 63 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2749431..2750927 | PHAGE_Gifsy_1: leucine-rich repeat protein; SC2579; phage(gi169257209) | 0.0 | Click |
| 2 | 2751154..2751330 | hypothetical protein; SC2580 | N/A | Click |
| 3 | complement(2751745..2752161) | PHAGE_Salmon_ST64B: Probable tail fiber assembly protein; SC2581; phage(gi23505469) | 9e-25 | Click |
| 4 | complement(2752168..2753580) | PHAGE_Entero_2: P2 gpH-like protein; SC2582; phage(gi169936027) | 0.0 | Click |
| 5 | 2753125..2753466 | hypothetical protein; SC2583 | N/A | Click |
| 6 | complement(2753580..2754260) | PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p49; SC2584; phage(gi31544052) | 2e-12 | Click |
| 7 | complement(2754257..2755456) | PHAGE_Iodoba_phiPLPE: gp61 putative baseplate protein; SC2585; phage(gi197085675) | 4e-41 | Click |
| 8 | 2754797..2754808 | attL AATATTAGCGAT | N/A | Click |
| 9 | complement(2755457..2755810) | PHAGE_Vibrio_CP_T1: hypothetical protein; SC2586; phage(gi418489248) | 4e-12 | Click |
| 10 | complement(2755946..2756701) | PHAGE_Aggreg_S1249: putative baseplate protein; SC2587; phage(gi273809550) | 2e-33 | Click |
| 11 | complement(2756765..2757550) | PHAGE_Vibrio_ICP1: putative antirepressor protein; SC2588; phage(gi325171055) | 5e-17 | Click |
| 12 | complement(2757615..2758178) | PHAGE_Salmon_SPN3UB: hypothetical protein; SC2589; phage(gi423262398) | 4e-34 | Click |
| 13 | complement(2758252..2758410) | hypothetical protein; SC2590 | N/A | Click |
| 14 | 2758511..2758888 | PHAGE_Salmon_SPN3UB: Arc-like DNA binding domain protein; SC2591; phage(gi423262396) | 1e-16 | Click |
| 15 | complement(2758895..2759230) | hypothetical protein; SC2592 | N/A | Click |
| 16 | complement(2759227..2760258) | PHAGE_Psychr_pOW20_A: hypothetical protein; SC2593; phage(gi472339843) | 3e-22 | Click |
| 17 | complement(2760261..2760563) | PHAGE_Psychr_pOW20_A: hypothetical protein; SC2594; phage(gi472339842) | 3e-05 | Click |
| 18 | complement(2760567..2761217) | PHAGE_Aggreg_S1249: hypothetical protein; SC2595; phage(gi273809554) | 3e-07 | Click |
| 19 | complement(2761217..2763169) | PHAGE_Aeromo_vB_AsaM_56: putative tail-fiber/lysozyme protein; SC2596; phage(gi422937553) | 1e-12 | Click |
| 20 | complement(2763347..2763799) | putative bacteriophage protein; SC2597 | N/A | Click |
| 21 | complement(2763803..2764246) | PHAGE_Entero_WV8: hypothetical protein WV8_gp071; SC2598; phage(gi238801803) | 4e-06 | Click |
| 22 | complement(2764259..2765404) | PHAGE_Aggreg_S1249: hypothetical protein; SC2599; phage(gi273809558) | 3e-39 | Click |
| 23 | complement(2765408..2765971) | putative bacteriophage protein; SC2600 | N/A | Click |
| 24 | complement(2765946..2766335) | putative bacteriophage protein; SC2601 | N/A | Click |
| 25 | complement(2766322..2766876) | PHAGE_Psychr_pOW20_A: hypothetical protein; SC2602; phage(gi472339833) | 3e-10 | Click |
| 26 | complement(2766873..2767280) | PHAGE_Pseudo_KPP12: putative structural protein; SC2603; phage(gi431811107) | 7e-08 | Click |
| 27 | complement(2767246..2767614) | putative bacteriophage protein; SC2604 | N/A | Click |
| 28 | complement(2767656..2768597) | PHAGE_Vibrio_CP_T1: putative major capsid protein; SC2605; phage(gi418489228) | 5e-19 | Click |
| 29 | complement(2768609..2769106) | putative bacteriophage protein; SC2606 | N/A | Click |
| 30 | complement(2769111..2770343) | PHAGE_Edward_MSW_3: putative head protein; SC2607; phage(gi448261038) | 6e-19 | Click |
| 31 | complement(2770358..2770966) | PHAGE_Xantho_vB_XveM_DIBBI: head morphogenesis protein; SC2608; phage(gi389060406) | 3e-15 | Click |
| 32 | complement(2770980..2772449) | PHAGE_Vibrio_CP_T1: putative portal protein; SC2609; phage(gi418489212) | 2e-42 | Click |
| 33 | complement(2772449..2774071) | PHAGE_Burkho_BcepB1A: gp33 TerL; SC2610; phage(gi48697520) | 2e-155 | Click |
| 34 | complement(2774074..2774652) | PHAGE_Escher_HK639: terminase small subunit; SC2611; phage(gi356870601) | 1e-76 | Click |
| 35 | complement(2774766..2775290) | PHAGE_Escher_HK639: rha protein; SC2612; phage(gi356870673) | 1e-92 | Click |
| 36 | complement(2775508..2775957) | PHAGE_Salmon_SPN3UB: endopeptidase Rz; SC2613; phage(gi423262445) | 2e-63 | Click |
| 37 | complement(2775975..2776427) | PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; SC2614; phage(gi169257296) | 2e-83 | Click |
| 38 | complement(2776411..2776746) | PHAGE_Gifsy_2: bacteriophage lysis protein; holin; SC2615; phage(gi169257295) | 3e-58 | Click |
| 39 | 2777016..2777702 | PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; SC2616; phage(gi169257294) | 6e-133 | Click |
| 40 | 2778063..2778512 | PHAGE_Gifsy_2: hypothetical protein STM1025.Gifsy2; SC2617; phage(gi169257293) | 9e-83 | Click |
| 41 | complement(2778648..2778773) | PHAGE_Gifsy_2: hypothetical protein STM1024.Gifsy2; SC2618; phage(gi169257292) | 1e-17 | Click |
| 42 | complement(2779172..2779969) | PHAGE_Gifsy_2: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; SC2619; phage(gi169257290) | 1e-153 | Click |
| 43 | complement(2780102..2780713) | PHAGE_Gifsy_2: NinG; SC2620; phage(gi169257288) | 1e-113 | Click |
| 44 | complement(2780716..2780916) | PHAGE_Gifsy_2: hypothetical protein STM1021.1n.Gifsy2; SC2621; phage(gi169257287) | 1e-35 | Click |
| 45 | complement(2780922..2781524) | PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; SC2622; phage(gi169257286) | 7e-110 | Click |
| 46 | complement(2781559..2781807) | PHAGE_Entero_mEp237: hypothetical protein; SC2623; phage(gi435439314) | 2e-39 | Click |
| 47 | complement(2781924..2782157) | PHAGE_Gifsy_2: bacteriophage damage-inducible protein DinI; SC2624; phage(gi169257284) | 1e-37 | Click |
| 48 | complement(2782312..2782578) | PHAGE_Salmon_SPN3UB: hypothetical protein; SC2625; phage(gi423262434) | 6e-47 | Click |
| 49 | complement(2782672..2782953) | PHAGE_Entero_ES18: gp37; SC2626; phage(gi62362250) | 2e-17 | Click |
| 50 | complement(2782964..2783221) | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; SC2627; phage(gi399498823) | 1e-13 | Click |
| 51 | complement(2783224..2783487) | PHAGE_Salmon_epsilon34: EaD-like protein; SC2628; phage(gi221328645) | 3e-21 | Click |
| 52 | complement(2783575..2783838) | PHAGE_Salmon_vB_SosS_Oslo: hypothetical protein; SC2629; phage(gi399528795) | 3e-42 | Click |
| 53 | complement(2783835..2784182) | PHAGE_Gifsy_2: hypothetical protein STM1016.Gifsy2; SC2630; phage(gi169257281) | 6e-52 | Click |
| 54 | complement(2784193..2784942) | PHAGE_Gifsy_2: bacteriophage DNA replication protein; SC2631; phage(gi169257280) | 1e-139 | Click |
| 55 | complement(2784945..2785928) | PHAGE_Gifsy_2: bacteriophage DNA replication protein; Lambda gpo homolog; SC2632; phage(gi169257279) | 0.0 | Click |
| 56 | complement(2786013..2786444) | PHAGE_Gifsy_2: bacteriophage transcriptional activator; Lambda gpCII analog; SC2633; phage(gi169257278) | 2e-54 | Click |
| 57 | 2786704..2787123 | PHAGE_Gifsy_2: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; SC2634; phage(gi169257276) | 5e-15 | Click |
| 58 | 2787413..2787529 | PHAGE_Gifsy_2: hypothetical protein STM1010.2n.Gifsy2; SC2635; phage(gi169257275) | 3e-15 | Click |
| 59 | 2787522..2787680 | PHAGE_Gifsy_2: hypothetical protein STM1010.1n.Gifsy2; SC2636; phage(gi169257274) | 3e-24 | Click |
| 60 | 2787702..2788052 | PHAGE_Gifsy_2: hypothetical protein STM1010.Gifsy2; SC2637; phage(gi169257273) | 1e-35 | Click |
| 61 | 2788179..2791106 | PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; SC2638; phage(gi169257272) | 0.0 | Click |
| 62 | 2791117..2792226 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SC2639; phage(gi169257271) | 0.0 | Click |
| 63 | 2792269..2792508 | PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; SC2640; phage(gi169257270) | 7e-40 | Click |
| 64 | 2792508..2792519 | attR AATATTAGCGAT | N/A | Click |
| 65 | complement(2792811..2793713) | PHAGE_Gifsy_1: bacteriophage integrase protein; SC2641; phage(gi169257266) | 3e-175 | Click |
Region 8, total : 23 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(4352610..4353338) | PHAGE_Entero_P1: PmgQ; SC4076; phage(gi46401711) | 9e-34 | Click |
| 2 | complement(4353535..4353885) | putative inner membrane protein; SC4077 | N/A | Click |
| 3 | complement(4354076..4354531) | PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; SC4078; phage(gi418489075) | 2e-24 | Click |
| 4 | complement(4354528..4355142) | PHAGE_Haemop_Aaphi23: putative tail fiber assembly protein; SC4079; phage(gi31544054) | 5e-07 | Click |
| 5 | complement(4355149..4356807) | PHAGE_Entero_PsP3: gp19; SC4080; phage(gi41057371) | 1e-76 | Click |
| 6 | complement(4356810..4357442) | PHAGE_Burkho_BcepMu: gp51; SC4081; phage(gi48696961) | 9e-26 | Click |
| 7 | complement(4357435..4358550) | PHAGE_Burkho_BcepMu: gp50; SC4082; phage(gi48696960) | 3e-105 | Click |
| 8 | complement(4358541..4358900) | PHAGE_Burkho_BcepMu: gp49; SC4083; phage(gi48696959) | 1e-35 | Click |
| 9 | complement(4360611..4361540) | PHAGE_Entero_SfV: bactoprenol glucosyltransferase; SC4084; phage(gi19549012) | 9e-152 | Click |
| 10 | complement(4361537..4361911) | PHAGE_Entero_SfV: putative flippase; SC4085; phage(gi19549013) | 7e-48 | Click |
| 11 | complement(4362226..4362948) | PHAGE_Burkho_BcepMu: gp48; SC4086; phage(gi48696958) | 2e-39 | Click |
| 12 | complement(4362958..4364001) | PHAGE_Burkho_BcepMu: gp47; SC4087; phage(gi48696957) | 4e-80 | Click |
| 13 | complement(4363989..4364198) | PHAGE_Burkho_BcepMu: gp46; SC4088; phage(gi48696956) | 5e-19 | Click |
| 14 | complement(4364198..4365151) | PHAGE_Burkho_BcepMu: gp45; SC4089; phage(gi48696955) | 3e-46 | Click |
| 15 | complement(4367690..4368007) | PHAGE_Burkho_BcepMu: gp41; SC4090; phage(gi48696951) | 1e-09 | Click |
| 16 | complement(4368059..4368583) | PHAGE_Burkho_BcepMu: gp40; SC4091; phage(gi48696950) | 1e-68 | Click |
| 17 | complement(4368583..4370010) | PHAGE_Burkho_BcepMu: gp39; SC4092; phage(gi48696949) | 0.0 | Click |
| 18 | complement(4370000..4370197) | PHAGE_Burkho_BcepMu: gp38; SC4093; phage(gi48696948) | 2e-08 | Click |
| 19 | complement(4370194..4370649) | PHAGE_Burkho_BcepMu: gp37; SC4094; phage(gi48696947) | 3e-13 | Click |
| 20 | complement(4370808..4371122) | PHAGE_Burkho_BcepMu: gp25; SC4095; phage(gi48696935) | 6e-23 | Click |
| 21 | complement(4371135..4371740) | PHAGE_Burkho_BcepMu: gp22; SC4096; phage(gi48696932) | 7e-57 | Click |
| 22 | complement(4371743..4372030) | PHAGE_Burkho_BcepMu: gp21; SC4097; phage(gi48696931) | 1e-20 | Click |
| 23 | 4372626..4372952 | PHAGE_Burkho_BcepMu: gp01; SC4098; phage(gi48696911) | 4e-24 | Click |