Definition Chromobacterium violaceum ATCC 12472 chromosome, complete genome.
Accession NC_005085
Length 4,751,080
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(353384..354691)  PHAGE_Ralsto_phiRSA1: tail fiber protein gpH; CV_0337; phage(gi145708097)  4e-32  Click
2 complement(354892..355458)  hypothetical protein; CV_0338  N/A  Click
3 complement(355470..356459)  PHAGE_Burkho_BcepNY3: tail fiber protein; CV_0339; phage(gi149882931)  9e-33  Click
4 complement(357171..357749)  PHAGE_Ralsto_phiRSA1: tail fiber assembly-like protein; CV_0340; phage(gi145708099)  2e-23  Click
5 complement(357760..359535)  PHAGE_Ralsto_phiRSA1: phage tail collar protein; CV_0341; phage(gi145708098)  2e-36  Click
6 complement(359643..360221)  PHAGE_Haemop_SuMu: hypothetical protein; CV_0342; phage(gi418489072)  2e-34  Click
7 complement(360218..361309)  PHAGE_Haemop_SuMu: baseplate J family protein gp47; CV_0343; phage(gi418489071)  3e-79  Click
8 complement(361306..361656)  PHAGE_Haemop_SuMu: Mu bacteriophage protein gp46; CV_0344; phage(gi418489070)  3e-26  Click
9 complement(361716..362342)  PHAGE_Haemop_SuMu: phage-related baseplate assembly protein gp45; CV_0345; phage(gi418489069)  2e-53  Click
10 complement(362353..363369)  PHAGE_Haemop_SuMu: Mu-like prophage tail protein gpP; CV_0346; phage(gi418489068)  3e-61  Click
11 complement(363383..364687)  PHAGE_Haemop_SuMu: DNA circulation protein; CV_0347; phage(gi418489067)  3e-33  Click
12 complement(364687..366288)  PHAGE_Helico_2: hypothetical protein; CV_0348; phage(gi370703038)  9e-25  Click
13 complement(366869..367243)  PHAGE_Haemop_SuMu: tail tube protein; CV_0349; phage(gi418489063)  2e-31  Click
14 complement(367368..368792)  PHAGE_Haemop_SuMu: tail sheath protein gpL; CV_0350; phage(gi418489090)  7e-112  Click
15 complement(368862..369566)  PHAGE_Haemop_SuMu: Mu-like prophage protein gp37; CV_0351; phage(gi418489088)  5e-08  Click
16 complement(369860..370057)  PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p11; CV_0352; phage(gi109289947)  7e-10  Click
17 complement(370614..370835)  hypothetical protein; CV_0353  N/A  Click
18 complement(370838..371242)  PHAGE_Cellul_phiSM: phage lysin; CV_0354; phage(gi472342176)  1e-06  Click
19 complement(371323..371742)  PHAGE_Pseudo_MP38: putative integral membrane protein; CV_0355; phage(gi215479943)  2e-20  Click
20 372080..372826  PHAGE_Aeromo_phiO18P: putative cI repressor; CV_0356; phage(gi148727133)  3e-27  Click
21 372956..373540  phosphoheptose isomerase; CV_0357  N/A  Click
22 complement(373611..374417)  PHAGE_Megavi_lba: putative alpha/beta hydrolase; CV_0358; phage(gi448825633)  4e-21  Click
Region 2, total : 27 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(427983..428303)  PHAGE_Burkho_BcepMu: gp01; CV_0406; phage(gi48696911)  2e-27  Click
2 428568..428996  PHAGE_Burkho_BcepMu: gp37; CV_0407; phage(gi48696947)  1e-16  Click
3 428993..429187  PHAGE_Burkho_BcepMu: gp38; CV_0408; phage(gi48696948)  3e-13  Click
4 429190..430620  PHAGE_Burkho_BcepMu: gp39; CV_0409; phage(gi48696949)  0.0  Click
5 430623..431147  PHAGE_Burkho_BcepMu: gp40; CV_0410; phage(gi48696950)  5e-77  Click
6 431362..431616  PHAGE_Burkho_BcepMu: gp41; CV_0411; phage(gi48696951)  5e-17  Click
7 complement(431689..432039)  hypothetical protein; CV_0412  N/A  Click
8 432059..435058  PHAGE_Vibrio_VP882: phage-related tail protein; CV_0413; phage(gi126010872)  5e-11  Click
9 435090..436004  PHAGE_Burkho_BcepMu: gp45; CV_0414; phage(gi48696955)  1e-44  Click
10 436008..436223  PHAGE_Burkho_BcepMu: gp46; CV_0415; phage(gi48696956)  4e-16  Click
11 436208..437266  PHAGE_Burkho_BcepMu: gp47; CV_0416; phage(gi48696957)  2e-81  Click
12 437278..437940  PHAGE_Burkho_BcepMu: gp48; CV_0417; phage(gi48696958)  2e-41  Click
13 437982..439907  PHAGE_Ralsto_phiRSA1: tail fiber protein gpH; CV_0418; phage(gi145708097)  1e-78  Click
14 439923..440522  PHAGE_Ralsto_phiRSA1: tail fiber assembly-like protein; CV_0419; phage(gi145708099)  4e-28  Click
15 440611..441339  PHAGE_Burkho_BcepMu: gp51; CV_0420; phage(gi48696961)  6e-22  Click
16 441386..441778  PHAGE_Burkho_BcepMu: gp49; CV_0421; phage(gi48696959)  4e-32  Click
17 441795..442961  PHAGE_Burkho_BcepMu: gp50; CV_0422; phage(gi48696960)  3e-79  Click
18 442954..443664  PHAGE_Burkho_BcepMu: gp51; CV_0423; phage(gi48696961)  6e-19  Click
19 443669..444370  PHAGE_Halomo_1: putative tail protein; CV_0424; phage(gi167832358)  2e-21  Click
20 444381..445052  hypothetical protein; CV_0425  N/A  Click
21 445062..445364  PHAGE_Synech_S_CBS4: tail fiber protein; CV_0426; phage(gi374531791)  7e-08  Click
22 complement(445682..445933)  hypothetical protein; CV_0427  N/A  Click
23 446054..446629  PHAGE_Burkho_BcepMu: gp51; CV_0428; phage(gi48696961)  8e-52  Click
24 446629..447996  PHAGE_Burkho_BcepMu: gp52; CV_0429; phage(gi48696962)  8e-11  Click
25 448011..448262  hypothetical protein; CV_0430  N/A  Click
26 448476..449939  PHAGE_Acinet_133: probably gp37-like tail fiber protein; CV_0431; phage(gi326536388)  3e-11  Click
27 449957..450397  PHAGE_Entero_SfV: tail fibre assembly protein; CV_0432; phage(gi19549010)  2e-10  Click
Region 3, total : 55 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2300705..2301481)  PHAGE_Vibrio_VP882: DNA adenine methylase; CV_2111; phage(gi126010878)  1e-102  Click
2 complement(2301636..2301869)  hypothetical protein; CV_2112  N/A  Click
3 complement(2301879..2302604)  hypothetical protein; CV_2113  N/A  Click
4 complement(2302601..2303317)  PHAGE_Halomo_1: putative tail protein; CV_2114; phage(gi167832358)  6e-21  Click
5 complement(2303969..2305075)  PHAGE_Burkho_BcepMu: gp50; CV_2115; phage(gi48696960)  8e-126  Click
6 complement(2305469..2305717)  hypothetical protein; CV_2116  N/A  Click
7 complement(2305782..2306390)  PHAGE_Burkho_BcepMu: gp48; CV_2117; phage(gi48696958)  2e-82  Click
8 complement(2306387..2307559)  PHAGE_Burkho_BcepMu: gp47; CV_2118; phage(gi48696957)  2e-132  Click
9 complement(2307547..2307753)  PHAGE_Burkho_BcepMu: gp46; CV_2119; phage(gi48696956)  3e-20  Click
10 complement(2307753..2308646)  PHAGE_Burkho_BcepMu: gp45; CV_2120; phage(gi48696955)  2e-89  Click
11 complement(2308646..2311441)  PHAGE_Burkho_BcepMu: gp44; CV_2121; phage(gi48696954)  3e-158  Click
12 2311471..2311722  hypothetical protein; CV_2122  N/A  Click
13 complement(2311818..2312087)  PHAGE_Burkho_BcepMu: gp41; CV_2123; phage(gi48696951)  4e-15  Click
14 2312214..2312750  PHAGE_Burkho_2: gp10; CV_2124; phage(gi134288697)  1e-15  Click
15 2312747..2313355  hypothetical protein; CV_2125  N/A  Click
16 2313352..2314008  hypothetical protein; CV_2126  N/A  Click
17 complement(2314074..2314598)  PHAGE_Burkho_BcepMu: gp40; CV_2127; phage(gi48696950)  2e-77  Click
18 complement(2314601..2316031)  PHAGE_Burkho_BcepMu: gp39; CV_2128; phage(gi48696949)  0.0  Click
19 complement(2316033..2316290)  PHAGE_Burkho_BcepMu: gp38; CV_2129; phage(gi48696948)  2e-13  Click
20 complement(2316338..2316802)  PHAGE_Burkho_BcepMu: gp37; CV_2130; phage(gi48696947)  9e-46  Click
21 complement(2316802..2317251)  PHAGE_Burkho_BcepMu: gp36; CV_2131; phage(gi48696946)  1e-50  Click
22 complement(2317253..2317585)  PHAGE_Burkho_BcepMu: gp35; CV_2132; phage(gi48696945)  5e-27  Click
23 complement(2317582..2317827)  hypothetical protein; CV_2133  N/A  Click
24 complement(2317838..2318764)  PHAGE_Burkho_BcepMu: gp34; CV_2134; phage(gi48696944)  4e-81  Click
25 complement(2318777..2319916)  PHAGE_Burkho_BcepMu: gp32; CV_2135; phage(gi48696942)  4e-124  Click
26 complement(2319982..2320581)  hypothetical protein; CV_2136  N/A  Click
27 complement(2320978..2321436)  PHAGE_Burkho_BcepMu: gp31; CV_2137; phage(gi48696941)  3e-29  Click
28 complement(2321433..2322269)  PHAGE_Burkho_BcepMu: gp30; CV_2138; phage(gi48696940)  2e-127  Click
29 complement(2322262..2323728)  PHAGE_Burkho_BcepMu: gp29; CV_2139; phage(gi48696939)  0.0  Click
30 complement(2323725..2325326)  PHAGE_Burkho_BcepMu: gp28; CV_2140; phage(gi48696938)  0.0  Click
31 complement(2325326..2325895)  PHAGE_Burkho_BcepMu: gp27; CV_2141; phage(gi48696937)  5e-64  Click
32 complement(2325895..2326203)  PHAGE_Burkho_BcepMu: gp26; CV_2142; phage(gi48696936)  6e-12  Click
33 complement(2326200..2326583)  PHAGE_Burkho_BcepMu: gp25; CV_2143; phage(gi48696935)  7e-06  Click
34 complement(2326580..2326786)  PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p11; CV_2144; phage(gi109289947)  3e-11  Click
35 complement(2326779..2327372)  PHAGE_Pseudo_B3: putative Rz lysis protein; CV_2145; phage(gi56692595)  3e-09  Click
36 complement(2327365..2327595)  PHAGE_Salmon_PVP_SE1: hypothetical protein; CV_2146; phage(gi363539563)  9e-05  Click
37 complement(2327595..2328005)  PHAGE_Lister_P35: PlyP35; CV_2147; phage(gi157325393)  6e-11  Click
38 complement(2328115..2328633)  hypothetical protein; CV_2148  N/A  Click
39 complement(2328684..2329649)  PHAGE_Burkho_BcepMu: gp18; CV_2149; phage(gi48696928)  5e-10  Click
40 complement(2329784..2330272)  PHAGE_Burkho_BcepMu: gp17; CV_2150; phage(gi48696927)  2e-27  Click
41 2330335..2330577  PHAGE_Burkho_BcepMu: gp16; CV_2151; phage(gi48696926)  7e-34  Click
42 complement(2330780..2331052)  hypothetical protein; CV_2152  N/A  Click
43 2331056..2331637  PHAGE_Burkho_BcepMu: gp13; CV_2153; phage(gi48696923)  6e-61  Click
44 2331634..2331936  PHAGE_Burkho_BcepMu: gp12; CV_2154; phage(gi48696922)  4e-37  Click
45 2331951..2332943  hypothetical protein; CV_2155  N/A  Click
46 2332955..2334742  PHAGE_Burkho_BcepMu: gp09; CV_2156; phage(gi48696919)  3e-98  Click
47 2334754..2335950  PHAGE_Burkho_BcepMu: gp08; CV_2157; phage(gi48696918)  8e-164  Click
48 2335952..2336257  hypothetical protein; CV_2158  N/A  Click
49 2336288..2336620  hypothetical protein; CV_2159  N/A  Click
50 2336614..2336985  hypothetical protein; CV_2160  N/A  Click
51 2336982..2337593  PHAGE_Burkho_BcepMu: gp05; CV_2161; phage(gi48696915)  1e-54  Click
52 2337595..2337816  PHAGE_Pseudo_MP42: hypothetical protein; CV_2162; phage(gi399528593)  7e-06  Click
53 2337863..2338135  PHAGE_Burkho_BcepMu: gp04; CV_2163; phage(gi48696914)  8e-15  Click
54 2338210..2338812  PHAGE_Burkho_BcepMu: gp02; CV_2164; phage(gi48696912)  5e-38  Click
55 2338809..2339162  PHAGE_Burkho_BcepMu: gp01; CV_2165; phage(gi48696911)  1e-40  Click
Region 4, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3314326..3314724  PHAGE_Entero_HK022: IS903 transposase; CV_3035; phage(gi9634149)  1e-24  Click
2 3314909..3315259  PHAGE_Entero_HK022: IS903 transposase; CV_3036; phage(gi9634149)  2e-06  Click
3 3315446..3316216  PHAGE_Strept_TG1: putative regulator, GntR family; CV_3037; phage(gi410491962)  3e-05  Click
4 complement(3316286..3317287)  PHAGE_Prochl_P_SSM2: putative nucleotide-sugar epimerase; CV_3038; phage(gi61806184)  5e-31  Click
5 complement(3317334..3317924)  PHAGE_Cafete_BV_PW1: hypothetical protein; CV_3039; phage(gi310831133)  3e-13  Click
6 complement(3317949..3318824)  PHAGE_Prochl_P_SSM2: putative carbohydrate kinase; CV_3040; phage(gi61806181)  8e-14  Click
7 complement(3318920..3320239)  PHAGE_Acanth_1: hypothetical protein ATCV1_Z571L; CV_3041; phage(gi155371518)  5e-43  Click
8 complement(3320236..3320979)  orotidine 5'-phosphate decarboxylase; CV_3042  N/A  Click
9 complement(3321041..3322198)  tetratricopeptide repeat protein; CV_3043  N/A  Click
10 complement(3322256..3322549)  hypothetical protein; CV_3044  N/A  Click
11 complement(3322686..3323000)  PHAGE_Sodali_phiSG1: DNA-binding protein HU-beta; CV_3045; phage(gi89886013)  8e-12  Click