Definition Salmonella enterica subsp. enterica serovar Typhi str. Ty2 chromosome, complete genome.
Accession NC_004631
Length 4,791,961
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 47 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1408218..1408790)  PHAGE_Entero_2: DNA-invertase; t1346; phage(gi169936026)  4e-82  Click
2 1409849..1410466  PHAGE_Entero_HK106: tail fiber assembly protein; t1349; phage(gi428783304)  1e-67  Click
3 complement(1410960..1411985)  PROPHAGE_Salmon_Ty2: variable tail fiber protein; t1351; phage(gi29143754)  3e-67  Click
4 complement(1411988..1412566)  PHAGE_Burkho_BcepMu: gp51; t1352; phage(gi48696961)  2e-62  Click
5 complement(1412559..1413662)  PHAGE_Burkho_BcepMu: gp50; t1353; phage(gi48696960)  2e-110  Click
6 complement(1413653..1414000)  PHAGE_Burkho_BcepMu: gp49; t1354; phage(gi48696959)  6e-34  Click
7 complement(1414057..1414584)  PHAGE_Burkho_BcepMu: gp48; t1355; phage(gi48696958)  3e-31  Click
8 complement(1414581..1415735)  PHAGE_Burkho_BcepMu: gp47; t1356; phage(gi48696957)  2e-89  Click
9 complement(1415723..1415938)  PHAGE_Burkho_BcepMu: gp46; t1357; phage(gi48696956)  1e-19  Click
10 complement(1415935..1416819)  PHAGE_Burkho_BcepMu: gp45; t1358; phage(gi48696955)  2e-76  Click
11 complement(1416819..1419284)  PHAGE_Burkho_BcepMu: gp44; t1359; phage(gi48696954)  1e-180  Click
12 complement(1419460..1419795)  PHAGE_Burkho_BcepMu: gp41; t1360; phage(gi48696951)  2e-05  Click
13 complement(1419893..1420174)  PHAGE_Escher_HK75: hypothetical protein; t1361; phage(gi356870704)  6e-15  Click
14 complement(1420177..1420698)  PHAGE_Burkho_BcepMu: gp40; t1362; phage(gi48696950)  3e-68  Click
15 complement(1420698..1422125)  PHAGE_Burkho_BcepMu: gp39; t1363; phage(gi48696949)  0.0  Click
16 complement(1422115..1422369)  PHAGE_Burkho_BcepMu: gp38; t1364; phage(gi48696948)  4e-09  Click
17 complement(1422366..1422830)  PHAGE_Burkho_BcepMu: gp37; t1365; phage(gi48696947)  6e-40  Click
18 complement(1422830..1423276)  PHAGE_Burkho_BcepMu: gp36; t1366; phage(gi48696946)  4e-36  Click
19 complement(1423278..1423616)  PHAGE_Burkho_BcepMu: gp35; t1367; phage(gi48696945)  3e-22  Click
20 complement(1423626..1424579)  PHAGE_Burkho_BcepMu: gp34; t1368; phage(gi48696944)  6e-68  Click
21 complement(1424594..1425709)  PHAGE_Burkho_BcepMu: gp32; t1369; phage(gi48696942)  4e-98  Click
22 complement(1425924..1426382)  PHAGE_Burkho_BcepMu: gp31; t1370; phage(gi48696941)  7e-33  Click
23 complement(1426385..1427206)  PHAGE_Burkho_BcepMu: gp30; t1371; phage(gi48696940)  1e-98  Click
24 complement(1427187..1428683)  PHAGE_Burkho_BcepMu: gp29; t1372; phage(gi48696939)  1e-167  Click
25 complement(1428683..1430278)  PHAGE_Burkho_BcepMu: gp28; t1373; phage(gi48696938)  0.0  Click
26 complement(1430275..1430820)  PHAGE_Burkho_BcepMu: gp27; t1374; phage(gi48696937)  3e-64  Click
27 complement(1430820..1431131)  PHAGE_Burkho_BcepMu: gp26; t1375; phage(gi48696936)  9e-30  Click
28 complement(1431131..1431457)  PHAGE_Burkho_BcepMu: gp25; t1376; phage(gi48696935)  8e-22  Click
29 complement(1431454..1432104)  PHAGE_Burkho_BcepMu: gp23; t1377; phage(gi48696933)  8e-09  Click
30 complement(1432088..1432816)  PHAGE_Burkho_BcepMu: gp22; t1379; phage(gi48696932)  5e-60  Click
31 complement(1432819..1433169)  PHAGE_Burkho_BcepMu: gp21; t1380; phage(gi48696931)  3e-26  Click
32 complement(1433413..1433943)  hypothetical protein; t1381  N/A  Click
33 1434005..1434436  PHAGE_Burkho_BcepMu: gp10; t1382; phage(gi48696920)  4e-26  Click
34 1434446..1434610  hypothetical protein; t1383  N/A  Click
35 1434614..1436383  PHAGE_Burkho_BcepMu: gp09; t1384; phage(gi48696919)  0.0  Click
36 1437563..1437832  hypothetical protein; t1386  N/A  Click
37 1437860..1438390  PHAGE_Pseudo_MP42: host nuclease inhibitor protein; t1387; phage(gi399528592)  4e-60  Click
38 1438488..1438682  hypothetical protein; t1388  N/A  Click
39 1438679..1438951  hypothetical protein; t1389  N/A  Click
40 1438961..1439263  hypothetical protein; t1390  N/A  Click
41 1439260..1439643  PHAGE_Entero_mEp460: hypothetical protein; t1391; phage(gi428782345)  1e-29  Click
42 1439636..1439851  hypothetical protein; t1392  N/A  Click
43 1439848..1440531  PHAGE_Pseudo_JBD24: hypothetical protein; t1393; phage(gi448245062)  5e-28  Click
44 1440528..1440758  hypothetical protein; t1394  N/A  Click
45 1440748..1440963  hypothetical protein; t1395  N/A  Click
46 1440953..1441405  PHAGE_Burkho_BcepMu: gp02; t1396; phage(gi48696912)  5e-26  Click
47 1441377..1441766  PHAGE_Burkho_BcepMu: gp01; t1397; phage(gi48696911)  2e-33  Click
Region 2, total : 64 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1928058..1928336  PHAGE_Entero_mEp390: DinI-like family protein; t1864; phage(gi428782688)  6e-26  Click
2 1928649..1929350  PHAGE_Entero_2008: hypothetical protein YYZ_gp72; t1865; phage(gi209427795)  1e-22  Click
3 complement(1930272..1930790)  PROPHAGE_Escher_Sakai: putative tail fiber assembly protein; t1867; phage(gi15834244)  6e-47  Click
4 complement(1930805..1932316)  PHAGE_Salmon_ST64B: tail protein; t1868; phage(gi23505468)  2e-50  Click
5 complement(1932316..1932996)  PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p49; t1869; phage(gi31544052)  4e-13  Click
6 complement(1932993..1934192)  PHAGE_Iodoba_phiPLPE: gp61 putative baseplate protein; t1870; phage(gi197085675)  3e-40  Click
7 1933533..1933544  attL    AATATTAGCGAT  N/A  Click
8 complement(1934193..1934546)  PHAGE_Vibrio_CP_T1: hypothetical protein; t1871; phage(gi418489248)  7e-13  Click
9 complement(1934562..1934699)  bacteriophage protein; t1872  N/A  Click
10 complement(1934787..1935542)  PHAGE_Aggreg_S1249: putative baseplate protein; t1873; phage(gi273809550)  1e-33  Click
11 complement(1935601..1936029)  PHAGE_Acinet_Bphi_B1251: hypothetical protein; t1874; phage(gi423262025)  9e-05  Click
12 complement(1936029..1936760)  bacteriophage protein; t1875  N/A  Click
13 complement(1936955..1937290)  hypothetical protein; t1876  N/A  Click
14 complement(1937287..1938318)  PHAGE_Psychr_pOW20_A: hypothetical protein; t1877; phage(gi472339843)  3e-22  Click
15 complement(1938321..1938623)  PHAGE_Psychr_pOW20_A: hypothetical protein; t1878; phage(gi472339842)  3e-05  Click
16 complement(1938627..1939277)  PHAGE_Aggreg_S1249: hypothetical protein; t1879; phage(gi273809554)  3e-07  Click
17 complement(1939277..1941229)  PHAGE_Aeromo_vB_AsaM_56: putative tail-fiber/lysozyme protein; t1880; phage(gi422937553)  8e-13  Click
18 complement(1941407..1941859)  bacteriophage protein; t1881  N/A  Click
19 complement(1941863..1942303)  PHAGE_Pseudo_vB_PaeM_C2_10_Ab1: hypothetical protein; t1882; phage(gi431809991)  1e-06  Click
20 complement(1942315..1943460)  PHAGE_Aggreg_S1249: hypothetical protein; t1883; phage(gi273809558)  2e-39  Click
21 complement(1943464..1944012)  bacteriophage protein; t1884  N/A  Click
22 complement(1944002..1944391)  bacteriophage protein; t1885  N/A  Click
23 complement(1944378..1944932)  PHAGE_Psychr_pOW20_A: hypothetical protein; t1886; phage(gi472339833)  2e-10  Click
24 complement(1944929..1945336)  PHAGE_Pseudo_KPP12: putative structural protein; t1887; phage(gi431811107)  1e-08  Click
25 complement(1945302..1945670)  bacteriophage protein; t1888  N/A  Click
26 complement(1945712..1946653)  PHAGE_Vibrio_CP_T1: putative major capsid protein; t1889; phage(gi418489228)  1e-19  Click
27 complement(1946665..1947162)  bacteriophage protein; t1890  N/A  Click
28 complement(1947167..1948399)  PHAGE_Edward_MSW_3: putative head protein; t1891; phage(gi448261038)  6e-19  Click
29 complement(1948414..1948944)  PHAGE_Xantho_vB_XveM_DIBBI: head morphogenesis protein; t1892; phage(gi389060406)  2e-15  Click
30 complement(1949036..1950505)  PHAGE_Vibrio_CP_T1: putative portal protein; t1893; phage(gi418489212)  4e-44  Click
31 complement(1950505..1951908)  PHAGE_Psychr_pOW20_A: phage terminase large subunit; t1894; phage(gi472339822)  3e-157  Click
32 complement(1951874..1952626)  PHAGE_Escher_HK639: terminase small subunit; t1895; phage(gi356870601)  1e-13  Click
33 complement(1952716..1952976)  bacteriophage protein; t1896  N/A  Click
34 complement(1953040..1953417)  PHAGE_Klebsi_phiKO2: Gp63; t1897; phage(gi46402149)  7e-45  Click
35 complement(1953460..1953999)  PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; t1898; phage(gi16765210)  3e-81  Click
36 complement(1953996..1954610)  PHAGE_Salmon_1: putative bacteriophage endolysin; t1899; phage(gi169257182)  2e-112  Click
37 complement(1954610..1954891)  PHAGE_Entero_mEp390: putative holin; t1900; phage(gi428782713)  9e-40  Click
38 complement(1954878..1955267)  PHAGE_Entero_mEp390: putative holin; t1901; phage(gi428782712)  2e-45  Click
39 1955484..1955933  PHAGE_Gifsy_2: hypothetical protein STM1025.Gifsy2; t1902; phage(gi169257293)  2e-83  Click
40 complement(1956069..1956194)  PHAGE_Gifsy_2: hypothetical protein STM1024.Gifsy2; t1903; phage(gi169257292)  1e-17  Click
41 complement(1956593..1957390)  PHAGE_Gifsy_2: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; t1904; phage(gi169257290)  6e-154  Click
42 complement(1957523..1958134)  PHAGE_Gifsy_2: NinG; t1905; phage(gi169257288)  8e-115  Click
43 complement(1958343..1958945)  PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; t1906; phage(gi169257286)  2e-110  Click
44 complement(1958985..1959290)  PHAGE_Salmon_SPN3UB: hypothetical protein; t1907; phage(gi423262436)  3e-42  Click
45 complement(1959280..1959519)  PHAGE_Gifsy_2: bacteriophage damage-inducible protein DinI; t1908; phage(gi169257284)  2e-38  Click
46 complement(1959704..1960201)  PHAGE_Entero_P1: Doc; t1909; phage(gi46401725)  4e-05  Click
47 complement(1960212..1960499)  bacteriophage protein; t1910  N/A  Click
48 complement(1960634..1960795)  bacteriophage protein; t1911  N/A  Click
49 complement(1960877..1961143)  PHAGE_Salmon_SPN3UB: hypothetical protein; t1912; phage(gi423262434)  6e-47  Click
50 complement(1961813..1962286)  PHAGE_Pectob_ZF40: putative methylase; t1914; phage(gi422936660)  5e-68  Click
51 complement(1962286..1962810)  PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; t1915; phage(gi169257282)  1e-33  Click
52 complement(1962807..1963154)  PHAGE_Gifsy_2: hypothetical protein STM1016.Gifsy2; t1916; phage(gi169257281)  2e-59  Click
53 complement(1963165..1963914)  PHAGE_Gifsy_2: bacteriophage DNA replication protein; t1917; phage(gi169257280)  1e-141  Click
54 complement(1963917..1964900)  PHAGE_Gifsy_2: bacteriophage DNA replication protein; Lambda gpo homolog; t1918; phage(gi169257279)  0.0  Click
55 complement(1964985..1965359)  PHAGE_Gifsy_2: bacteriophage transcriptional activator; Lambda gpCII analog; t1919; phage(gi169257278)  1e-54  Click
56 1965691..1966095  PHAGE_Gifsy_2: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; t1920; phage(gi169257276)  5e-15  Click
57 1966384..1966584  PHAGE_Escher_P13374: host killing protein; t1921; phage(gi410491620)  4e-11  Click
58 1966675..1966971  PHAGE_Stx2_c_86: host-nuclease inhibitor protein Gam; t1922; phage(gi116222045)  8e-38  Click
59 1966977..1967762  PHAGE_Entero_HK630: Bet protein; t1923; phage(gi428782823)  1e-144  Click
60 1967759..1968439  PHAGE_Stx2_c_1717: exonuclease; t1924; phage(gi209447136)  7e-115  Click
61 1968517..1969581  PHAGE_Salmon_SPN1S: putative bacteriophage protein; t1925; phage(gi374531224)  1e-141  Click
62 1969578..1970459  PHAGE_Entero_P1: Dmt; t1926; phage(gi46401691)  3e-73  Click
63 1970459..1970704  PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; t1927; phage(gi169257270)  5e-39  Click
64 1970704..1970715  attR    AATATTAGCGAT  N/A  Click
65 1970745..1970993  PHAGE_Gifsy_2: bacteriophage excisionase; t1928; phage(gi169257269)  1e-43  Click
66 1970990..1972330  PHAGE_Gifsy_2: bacteriophage integrase; t1929; phage(gi169257268)  0.0  Click
Region 3, total : 9 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2036445..2036458  attL    TGAGCTGGCGGAAA  N/A  Click
2 2043456..2043833  PROPHAGE_Escher_CFT073: P4 family integrase; t1986; phage(gi26248244)  2e-48  Click
3 2043995..2044192  hypothetical protein; t1987  N/A  Click
4 complement(2044404..2046680)  PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; t1988; phage(gi15800640)  0.0  Click
5 complement(2046711..2047031)  PHAGE_Cronob_vB_CsaM_GAP32: ATP-dependent Clp protease; t1989; phage(gi414087232)  3e-05  Click
6 2047355..2047576  PHAGE_Lactoc_bIL312: Csp; t1990; phage(gi13095918)  5e-14  Click
7 complement(2047706..2049652)  PHAGE_Plankt_PaV_LD: ABC transporter; t1991; phage(gi371496158)  5e-41  Click
8 complement(2049649..2050767)  PHAGE_Cronob_ENT47670: putative tail protein; t1992; phage(gi431810494)  7e-05  Click
9 2050913..2051863  virK protein; t1993  N/A  Click
10 complement(2051860..2053518)  PHAGE_Entero_P2: Old; t1994; phage(gi9630369)  5e-06  Click
11 2065436..2065449  attR    TGAGCTGGCGGAAA  N/A  Click
Region 4, total : 14 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2734604..2734615  attL    GCTTAATAACCT  N/A  Click
2 2735202..2736233  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; t2647; phage(gi16130540)  2e-117  Click
3 complement(2738152..2738724)  PHAGE_Entero_P4: amber mutation-suppressing protein; t2648; phage(gi9627520)  1e-102  Click
4 complement(2738798..2738965)  PHAGE_Entero_P4: transactivation protein; t2649; phage(gi9627519)  1e-24  Click
5 complement(2739295..2740029)  PHAGE_Entero_P4: head size determination protein sid; t2650; phage(gi9627518)  5e-133  Click
6 2740629..2740847  PHAGE_Entero_P4: transcriptional regulator; t2651; phage(gi9627517)  4e-37  Click
7 2741030..2741434  PHAGE_Entero_P4: putative CI repressor; t2652; phage(gi9627516)  4e-56  Click
8 2741427..2741714  PHAGE_Entero_P4: helper derepression protein; t2653; phage(gi9627515)  4e-50  Click
9 2741707..2742162  PHAGE_Entero_P4: hypothetical protein P4p08; t2654; phage(gi9627514)  4e-89  Click
10 2742298..2742618  PHAGE_Entero_P4: hypothetical protein P4p07; t2655; phage(gi9627513)  6e-57  Click
11 2742633..2744966  PHAGE_Entero_P4: DNA primase; t2656; phage(gi9627512)  0.0  Click
12 complement(2745590..2746363)  reverse transcriptase; t2657  N/A  Click
13 complement(2746332..2746520)  hypothetical protein; t2658  N/A  Click
14 complement(2746767..2746985)  PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); t2659; phage(gi169936018)  4e-21  Click
15 complement(2747076..2748176)  PHAGE_Entero_2: P2 gpD-like tail protein; t2660; phage(gi169936019)  0.0  Click
16 2759926..2759937  attR    GCTTAATAACCT  N/A  Click
Region 5, total : 47 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3489900..3489911  attL    TATCTCCCGGTT  N/A  Click
2 complement(3498618..3500264)  PHAGE_Ostreo_2: putative acetolactate synthase large subunit; t3397; phage(gi314055125)  3e-65  Click
3 complement(3500404..3500502)  ilvG operon leader peptide; t3398  N/A  Click
4 complement(3501128..3502180)  PHAGE_Entero_2: P2 Int-like protein; t3400; phage(gi169936064)  1e-100  Click
5 complement(3502344..3502496)  hypothetical protein; t3401  N/A  Click
6 complement(3502576..3503145)  PHAGE_Entero_2: P2 CI-like protein; t3402; phage(gi169936063)  3e-35  Click
7 3503271..3503492  PHAGE_Pasteu_F108: Cox; t3403; phage(gi109302900)  2e-05  Click
8 3503525..3504034  PHAGE_Entero_2: bacteriophage regulatory protein CII; t3404; phage(gi169936061)  1e-83  Click
9 3504209..3504433  hypothetical protein; t3405  N/A  Click
10 3504456..3504797  PHAGE_Entero_2: hypothetical protein STM2733.Fels2; t3406; phage(gi169936058)  1e-51  Click
11 3504865..3505098  PHAGE_Entero_2: hypothetical protein STM2732.Fels2; t3407; phage(gi169936057)  1e-26  Click
12 3505098..3505325  PHAGE_Entero_2: P2 gpOrf82-like protein; t3408; phage(gi169936056)  5e-35  Click
13 3505322..3506179  PHAGE_Entero_2: DNA adenine methylase-like protein; t3409; phage(gi169936055)  9e-119  Click
14 3506176..3508590  PHAGE_Entero_2: P2 gpA-like protein; t3410; phage(gi169936054)  0.0  Click
15 3508744..3508932  PHAGE_Entero_2: hypothetical protein STM2728.Fels2; t3411; phage(gi169936053)  6e-28  Click
16 complement(3509000..3509299)  lipoprotein; t3412  N/A  Click
17 complement(3509408..3510214)  lipoprotein; t3413  N/A  Click
18 3510900..3511814  hypothetical protein; t3414  N/A  Click
19 3511811..3512551  hypothetical protein; t3415  N/A  Click
20 complement(3512586..3513623)  PHAGE_Entero_2: P2 gpQ-like protein; t3416; phage(gi169936049)  4e-173  Click
21 complement(3513623..3515389)  PHAGE_Entero_2: P2 gpP-like protein; t3417; phage(gi169936048)  0.0  Click
22 3515532..3516365  PHAGE_Entero_2: P2 gpO-like protein; t3418; phage(gi169936047)  2e-129  Click
23 3516382..3517440  PHAGE_Entero_2: P2 gpN-like major capsid protein; t3419; phage(gi169936046)  6e-178  Click
24 3517444..3518094  PHAGE_Entero_2: P2 gpM-like protein; t3420; phage(gi169936045)  4e-113  Click
25 3518127..3518654  PHAGE_Entero_2: P2 gpL-like protein; t3421; phage(gi169936044)  1e-78  Click
26 3518654..3518857  PHAGE_Entero_2: P2 gpX-like tail protein; t3422; phage(gi169936043)  1e-32  Click
27 3518861..3519076  PHAGE_Entero_2: lysis protein; t3423; phage(gi169936042)  6e-29  Click
28 3519096..3519569  PHAGE_Entero_2: endolysin; t3424; phage(gi169936041)  7e-81  Click
29 3519571..3519948  hypothetical protein; t3425  N/A  Click
30 3519945..3520373  PHAGE_Entero_2: P2 LysB-like protein; t3426; phage(gi169936038)  2e-55  Click
31 3520469..3520900  PHAGE_Entero_2: P2 gpR-like tail completion protein; t3427; phage(gi169936036)  2e-72  Click
32 3520893..3521339  PHAGE_Entero_2: P2 gpS-like tail completion protein; t3428; phage(gi169936035)  2e-72  Click
33 3521408..3521986  PHAGE_Entero_2: P2 gpV-like protein; t3429; phage(gi169936034)  4e-96  Click
34 3521983..3522342  PHAGE_Entero_2: P2 gpW-like baseplate protein; t3430; phage(gi169936033)  4e-51  Click
35 3522329..3523237  PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; t3431; phage(gi169936032)  3e-147  Click
36 3523230..3523835  PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; t3432; phage(gi169936031)  3e-110  Click
37 3523832..3525346  PHAGE_Entero_2: P2 gpH-like protein; t3433; phage(gi169936030)  4e-122  Click
38 3525346..3525939  PHAGE_Entero_HK106: tail fiber assembly protein; t3434; phage(gi428783304)  1e-62  Click
39 complement(3525911..3526351)  PHAGE_Entero_mEp213: tail fiber assembly protein; t3435; phage(gi428782612)  1e-25  Click
40 3526780..3527346  PHAGE_Entero_2: DNA-invertase; t3437; phage(gi169936026)  9e-88  Click
41 3527489..3528661  PHAGE_Entero_2: P2 gpFI-like protein; t3438; phage(gi169936025)  0.0  Click
42 3528671..3529186  PHAGE_Entero_2: P2 gpFII-like protein; t3439; phage(gi169936024)  8e-92  Click
43 3529241..3529543  PHAGE_Entero_2: P2 gpE-like tail protein; t3440; phage(gi169936023)  2e-44  Click
44 3529558..3529677  PHAGE_Entero_2: P2 gpE-like protein; t3441; phage(gi169936022)  1e-14  Click
45 3529670..3532747  PHAGE_Entero_2: P2 gpT-like tail protein; t3442; phage(gi169936021)  0.0  Click
46 3532744..3533229  PHAGE_Entero_2: P2 gpU-like tail protein; t3443; phage(gi169936020)  3e-74  Click
47 3533226..3534326  PHAGE_Entero_2: P2 gpD-like tail protein; t3444; phage(gi169936019)  0.0  Click
48 3534417..3534635  PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); t3445; phage(gi169936018)  2e-22  Click
49 3540712..3540723  attR    TATCTCCCGGTT  N/A  Click
Region 6, total : 29 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(3512586..3513623)  PHAGE_Entero_2: P2 gpQ-like protein; t3416; phage(gi169936049)  4e-173  Click
2 complement(3513623..3515389)  PHAGE_Entero_2: P2 gpP-like protein; t3417; phage(gi169936048)  0.0  Click
3 3515532..3516365  PHAGE_Entero_2: P2 gpO-like protein; t3418; phage(gi169936047)  2e-129  Click
4 3516382..3517440  PHAGE_Entero_2: P2 gpN-like major capsid protein; t3419; phage(gi169936046)  6e-178  Click
5 3517444..3518094  PHAGE_Entero_2: P2 gpM-like protein; t3420; phage(gi169936045)  4e-113  Click
6 3518127..3518654  PHAGE_Entero_2: P2 gpL-like protein; t3421; phage(gi169936044)  1e-78  Click
7 3518654..3518857  PHAGE_Entero_2: P2 gpX-like tail protein; t3422; phage(gi169936043)  1e-32  Click
8 3518861..3519076  PHAGE_Entero_2: lysis protein; t3423; phage(gi169936042)  6e-29  Click
9 3519096..3519569  PHAGE_Entero_2: endolysin; t3424; phage(gi169936041)  7e-81  Click
10 3519571..3519948  hypothetical protein; t3425  N/A  Click
11 3519945..3520373  PHAGE_Entero_2: P2 LysB-like protein; t3426; phage(gi169936038)  2e-55  Click
12 3520469..3520900  PHAGE_Entero_2: P2 gpR-like tail completion protein; t3427; phage(gi169936036)  2e-72  Click
13 3520893..3521339  PHAGE_Entero_2: P2 gpS-like tail completion protein; t3428; phage(gi169936035)  2e-72  Click
14 3521408..3521986  PHAGE_Entero_2: P2 gpV-like protein; t3429; phage(gi169936034)  4e-96  Click
15 3521983..3522342  PHAGE_Entero_2: P2 gpW-like baseplate protein; t3430; phage(gi169936033)  4e-51  Click
16 3522329..3523237  PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; t3431; phage(gi169936032)  3e-147  Click
17 3523230..3523835  PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; t3432; phage(gi169936031)  3e-110  Click
18 3523832..3525346  PHAGE_Entero_2: P2 gpH-like protein; t3433; phage(gi169936030)  4e-122  Click
19 3525346..3525939  PHAGE_Entero_HK106: tail fiber assembly protein; t3434; phage(gi428783304)  1e-62  Click
20 complement(3525911..3526351)  PHAGE_Entero_mEp213: tail fiber assembly protein; t3435; phage(gi428782612)  1e-25  Click
21 3526780..3527346  PHAGE_Entero_2: DNA-invertase; t3437; phage(gi169936026)  9e-88  Click
22 3527489..3528661  PHAGE_Entero_2: P2 gpFI-like protein; t3438; phage(gi169936025)  0.0  Click
23 3528671..3529186  PHAGE_Entero_2: P2 gpFII-like protein; t3439; phage(gi169936024)  8e-92  Click
24 3529241..3529543  PHAGE_Entero_2: P2 gpE-like tail protein; t3440; phage(gi169936023)  2e-44  Click
25 3529558..3529677  PHAGE_Entero_2: P2 gpE-like protein; t3441; phage(gi169936022)  1e-14  Click
26 3529670..3532747  PHAGE_Entero_2: P2 gpT-like tail protein; t3442; phage(gi169936021)  0.0  Click
27 3532744..3533229  PHAGE_Entero_2: P2 gpU-like tail protein; t3443; phage(gi169936020)  3e-74  Click
28 3533226..3534326  PHAGE_Entero_2: P2 gpD-like tail protein; t3444; phage(gi169936019)  0.0  Click
29 3534417..3534635  PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); t3445; phage(gi169936018)  2e-22  Click
Region 7, total : 40 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4446847..4446860  attL    CTTTTTTCACCAGT  N/A  Click
2 4446878..4447798  PROPHAGE_Salmon_LT2: integrase; t4280; phage(gi16766072)  7e-63  Click
3 4448315..4448824  hypothetical protein; t4281  N/A  Click
4 4448920..4449300  hypothetical protein; t4282  N/A  Click
5 4449766..4450350  hypothetical protein; t4283  N/A  Click
6 4450347..4450643  hypothetical protein; t4284  N/A  Click
7 4450721..4451179  hypothetical protein; t4285  N/A  Click
8 4451268..4453217  PHAGE_Caulob_phiCbK: putative ArdC-like antirestriction protein; t4286; phage(gi414087906)  6e-26  Click
9 4453289..4454197  hypothetical protein; t4287  N/A  Click
10 4454271..4455170  hypothetical protein; t4288  N/A  Click
11 4455212..4455571  hypothetical protein; t4289  N/A  Click
12 complement(4455671..4455940)  hypothetical protein; t4290  N/A  Click
13 complement(4456072..4457346)  PHAGE_Cronob_ENT39118: DNA polymerase; t4291; phage(gi431811050)  6e-152  Click
14 4457565..4457942  PHAGE_Burkho_KS14: gp9; t4293; phage(gi327198278)  1e-05  Click
15 complement(4458029..4458247)  PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); t4294; phage(gi169936018)  1e-28  Click
16 complement(4458315..4459415)  PHAGE_Entero_2: P2 gpD-like tail protein; t4295; phage(gi169936019)  0.0  Click
17 complement(4459412..4459897)  PHAGE_Entero_2: P2 gpU-like tail protein; t4296; phage(gi169936020)  1e-82  Click
18 complement(4459897..4462677)  PHAGE_Entero_2: P2 gpT-like tail protein; t4297; phage(gi169936021)  4e-117  Click
19 complement(4462670..4462789)  PHAGE_Entero_2: P2 gpE-like protein; t4298; phage(gi169936022)  8e-15  Click
20 complement(4462804..4463106)  PHAGE_Entero_2: P2 gpE-like tail protein; t4299; phage(gi169936023)  4e-46  Click
21 complement(4463161..4463676)  PHAGE_Entero_2: P2 gpFII-like protein; t4300; phage(gi169936024)  7e-94  Click
22 complement(4463686..4464858)  PHAGE_Entero_2: P2 gpFI-like protein; t4301; phage(gi169936025)  0.0  Click
23 4465393..4466115  invasion-associated secreted protein; t4303  N/A  Click
24 complement(4466313..4466720)  PHAGE_Entero_2: P2 gpG-like protein; t4304; phage(gi169936028)  8e-66  Click
25 complement(4466727..4468346)  PHAGE_Entero_2: P2 gpH-like protein; t4305; phage(gi169936030)  2e-160  Click
26 complement(4468343..4468948)  PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; t4306; phage(gi169936031)  3e-110  Click
27 complement(4468941..4469849)  PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; t4307; phage(gi169936032)  4e-159  Click
28 complement(4469836..4470195)  PHAGE_Entero_2: P2 gpW-like baseplate protein; t4308; phage(gi169936033)  2e-58  Click
29 complement(4470192..4470770)  PHAGE_Entero_2: P2 gpV-like protein; t4309; phage(gi169936034)  3e-111  Click
30 complement(4470839..4471285)  PHAGE_Entero_2: P2 gpS-like tail completion protein; t4310; phage(gi169936035)  1e-77  Click
31 complement(4471805..4472230)  PHAGE_Entero_2: P2 LysB-like protein; t4312; phage(gi169936038)  6e-69  Click
32 complement(4472230..4472607)  hypothetical protein; t4313  N/A  Click
33 complement(4472612..4473082)  PHAGE_Entero_2: endolysin; t4314; phage(gi169936041)  7e-87  Click
34 complement(4473102..4473317)  PHAGE_Entero_2: lysis protein; t4315; phage(gi169936042)  1e-34  Click
35 complement(4473321..4473524)  PHAGE_Entero_2: P2 gpX-like tail protein; t4316; phage(gi169936043)  9e-35  Click
36 complement(4473524..4473988)  PHAGE_Entero_2: P2 gpL-like protein; t4317; phage(gi169936044)  6e-86  Click
37 complement(4474082..4474732)  PHAGE_Entero_2: P2 gpM-like protein; t4318; phage(gi169936045)  8e-116  Click
38 complement(4474736..4475800)  PHAGE_Entero_2: P2 gpN-like major capsid protein; t4319; phage(gi169936046)  0.0  Click
39 complement(4475817..4476650)  PHAGE_Entero_2: P2 gpO-like protein; t4320; phage(gi169936047)  2e-145  Click
40 4476356..4476369  attR    CTTTTTTCACCAGT  N/A  Click
41 4476793..4478559  PHAGE_Entero_2: P2 gpP-like protein; t4322; phage(gi169936048)  0.0  Click
42 4478556..4479602  PHAGE_Entero_2: P2 gpQ-like protein; t4321; phage(gi169936049)  6e-179  Click
Region 8, total : 58 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4446021..4446055  attL    GCCTTCGGGTGGTACAGCCCTTTAATCTTTGGAAA  N/A  Click
2 4446878..4447798  PROPHAGE_Salmon_LT2: integrase; t4280; phage(gi16766072)  7e-63  Click
3 4448208..4448242  attR    GCCTTCGGGTGGTACAGCCCTTTAATCTTTGGAAA  N/A  Click
4 4448315..4448824  hypothetical protein; t4281  N/A  Click
5 4448920..4449300  hypothetical protein; t4282  N/A  Click
6 4449766..4450350  hypothetical protein; t4283  N/A  Click
7 4450347..4450643  hypothetical protein; t4284  N/A  Click
8 4450721..4451179  hypothetical protein; t4285  N/A  Click
9 4451268..4453217  PHAGE_Caulob_phiCbK: putative ArdC-like antirestriction protein; t4286; phage(gi414087906)  6e-26  Click
10 4453289..4454197  hypothetical protein; t4287  N/A  Click
11 4454271..4455170  hypothetical protein; t4288  N/A  Click
12 4455212..4455571  hypothetical protein; t4289  N/A  Click
13 complement(4455671..4455940)  hypothetical protein; t4290  N/A  Click
14 complement(4456072..4457346)  PHAGE_Cronob_ENT39118: DNA polymerase; t4291; phage(gi431811050)  6e-152  Click
15 4457565..4457942  PHAGE_Burkho_KS14: gp9; t4293; phage(gi327198278)  1e-05  Click
16 complement(4458029..4458247)  PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); t4294; phage(gi169936018)  1e-28  Click
17 complement(4458315..4459415)  PHAGE_Entero_2: P2 gpD-like tail protein; t4295; phage(gi169936019)  0.0  Click
18 complement(4459412..4459897)  PHAGE_Entero_2: P2 gpU-like tail protein; t4296; phage(gi169936020)  1e-82  Click
19 complement(4459897..4462677)  PHAGE_Entero_2: P2 gpT-like tail protein; t4297; phage(gi169936021)  4e-117  Click
20 complement(4462670..4462789)  PHAGE_Entero_2: P2 gpE-like protein; t4298; phage(gi169936022)  8e-15  Click
21 complement(4462804..4463106)  PHAGE_Entero_2: P2 gpE-like tail protein; t4299; phage(gi169936023)  4e-46  Click
22 complement(4463161..4463676)  PHAGE_Entero_2: P2 gpFII-like protein; t4300; phage(gi169936024)  7e-94  Click
23 complement(4463686..4464858)  PHAGE_Entero_2: P2 gpFI-like protein; t4301; phage(gi169936025)  0.0  Click
24 4465393..4466115  invasion-associated secreted protein; t4303  N/A  Click
25 complement(4466313..4466720)  PHAGE_Entero_2: P2 gpG-like protein; t4304; phage(gi169936028)  8e-66  Click
26 complement(4466727..4468346)  PHAGE_Entero_2: P2 gpH-like protein; t4305; phage(gi169936030)  2e-160  Click
27 complement(4468343..4468948)  PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; t4306; phage(gi169936031)  3e-110  Click
28 complement(4468941..4469849)  PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; t4307; phage(gi169936032)  4e-159  Click
29 complement(4469836..4470195)  PHAGE_Entero_2: P2 gpW-like baseplate protein; t4308; phage(gi169936033)  2e-58  Click
30 complement(4470192..4470770)  PHAGE_Entero_2: P2 gpV-like protein; t4309; phage(gi169936034)  3e-111  Click
31 complement(4470839..4471285)  PHAGE_Entero_2: P2 gpS-like tail completion protein; t4310; phage(gi169936035)  1e-77  Click
32 4471789..4471800  attL    CGCATTCAGATC  N/A  Click
33 complement(4471805..4472230)  PHAGE_Entero_2: P2 LysB-like protein; t4312; phage(gi169936038)  6e-69  Click
34 complement(4472230..4472607)  hypothetical protein; t4313  N/A  Click
35 complement(4472612..4473082)  PHAGE_Entero_2: endolysin; t4314; phage(gi169936041)  7e-87  Click
36 complement(4473102..4473317)  PHAGE_Entero_2: lysis protein; t4315; phage(gi169936042)  1e-34  Click
37 complement(4473321..4473524)  PHAGE_Entero_2: P2 gpX-like tail protein; t4316; phage(gi169936043)  9e-35  Click
38 complement(4473524..4473988)  PHAGE_Entero_2: P2 gpL-like protein; t4317; phage(gi169936044)  6e-86  Click
39 complement(4474082..4474732)  PHAGE_Entero_2: P2 gpM-like protein; t4318; phage(gi169936045)  8e-116  Click
40 complement(4474736..4475800)  PHAGE_Entero_2: P2 gpN-like major capsid protein; t4319; phage(gi169936046)  0.0  Click
41 complement(4475817..4476650)  PHAGE_Entero_2: P2 gpO-like protein; t4320; phage(gi169936047)  2e-145  Click
42 4476793..4478559  PHAGE_Entero_2: P2 gpP-like protein; t4322; phage(gi169936048)  0.0  Click
43 4478556..4479602  PHAGE_Entero_2: P2 gpQ-like protein; t4321; phage(gi169936049)  6e-179  Click
44 complement(4479651..4480346)  hypothetical protein; t4323  N/A  Click
45 complement(4480366..4481430)  hypothetical protein; t4324  N/A  Click
46 complement(4481427..4482491)  hypothetical protein; t4325  N/A  Click
47 complement(4482501..4482719)  hypothetical protein; t4326  N/A  Click
48 complement(4483416..4485824)  PHAGE_Entero_2: P2 gpA-like protein; t4328; phage(gi169936054)  0.0  Click
49 complement(4485815..4486675)  PHAGE_Entero_2: DNA adenine methylase-like protein; t4329; phage(gi169936055)  3e-130  Click
50 complement(4486672..4487256)  PHAGE_Vibrio_vB_VpaM_MAR: putative exonuclease; t4330; phage(gi428782757)  2e-45  Click
51 complement(4487253..4487480)  PHAGE_Entero_2: P2 gpOrf82-like protein; t4331; phage(gi169936056)  9e-40  Click
52 complement(4487480..4487713)  PHAGE_Entero_2: hypothetical protein STM2732.Fels2; t4332; phage(gi169936057)  1e-35  Click
53 complement(4487781..4488122)  PHAGE_Entero_2: hypothetical protein STM2733.Fels2; t4333; phage(gi169936058)  2e-49  Click
54 complement(4488086..4488286)  PHAGE_Entero_2: hypothetical protein STM2735.Fels2; t4334; phage(gi169936060)  9e-13  Click
55 complement(4488294..4488803)  PHAGE_Entero_2: bacteriophage regulatory protein CII; t4335; phage(gi169936061)  5e-91  Click
56 complement(4488836..4489078)  PHAGE_Entero_2: bacteriophage regulatory protein Ap1; t4336; phage(gi169936062)  2e-40  Click
57 4489195..4489827  PHAGE_Entero_2: P2 CI-like protein; t4337; phage(gi169936063)  5e-116  Click
58 4489831..4490856  PHAGE_Entero_2: P2 Int-like protein; t4338; phage(gi169936064)  0.0  Click
59 4491188..4491199  attR    CGCATTCAGATC  N/A  Click
60 4491584..4491697  hypothetical protein; t4340  N/A  Click
61 4491933..4492220  hypothetical protein; t4341  N/A  Click
62 4492231..4493121  PHAGE_Microm_12T: hypothetical protein; t4342; phage(gi472342811)  2e-06  Click
Region 9, total : 12 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4666559..4666572  attL    GAGTCCGGCCTTCG  N/A  Click
2 4666742..4668007  PHAGE_Entero_P4: integrase; t4518; phage(gi9627511)  0.0  Click
3 complement(4668070..4669146)  PHAGE_Plankt_PaV_LD: protein kinase; t4519; phage(gi371496162)  4e-16  Click
4 complement(4669143..4670216)  PHAGE_Plankt_PaV_LD: protein kinase; t4520; phage(gi371496162)  2e-56  Click
5 complement(4670191..4671354)  PHAGE_Plankt_PaV_LD: protein phosphatase; t4521; phage(gi371496161)  6e-34  Click
6 complement(4671630..4672196)  PHAGE_Entero_P4: amber mutation-suppressing protein; t4522; phage(gi9627520)  3e-63  Click
7 complement(4672212..4672451)  PHAGE_Entero_P2: Ogr; t4523; phage(gi9630356)  2e-14  Click
8 complement(4672455..4673315)  PHAGE_Entero_P4: head size determination protein sid; t4524; phage(gi9627518)  9e-20  Click
9 4673738..4674061  PHAGE_Entero_P4: transcriptional regulator; t4525; phage(gi9627517)  8e-28  Click
10 4674162..4674545  PHAGE_Entero_P4: putative CI repressor; t4526; phage(gi9627516)  5e-38  Click
11 4674542..4674769  hypothetical protein; t4527  N/A  Click
12 4674766..4675086  PHAGE_Entero_P4: hypothetical protein P4p07; t4528; phage(gi9627513)  5e-53  Click
13 4677655..4677795  PHAGE_Entero_P4: hypothetical protein P4p05; t4530; phage(gi19263411)  5e-07  Click
14 4677962..4677975  attR    GAGTCCGGCCTTCG  N/A  Click