| Definition | Clostridium tetani E88 chromosome, complete genome. |
|---|---|
| Accession | NC_004557 |
| Length | 2,799,251 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 19 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1152545..1153633 | PHAGE_Bacill_36: homing nuclease; CTC01084; phage(gi156564175) | 5e-10 | Click |
| 2 | 1153679..1154602 | PHAGE_Staphy_SpaA1: phage terminase, small subunit; CTC01085; phage(gi399498865) | 9e-88 | Click |
| 3 | 1154592..1155935 | PHAGE_Clostr_phiCTP1: putative terminase large subunit; CTC01086; phage(gi304360664) | 2e-141 | Click |
| 4 | 1155935..1157392 | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp4; CTC01087; phage(gi304360666) | 1e-103 | Click |
| 5 | 1157449..1157922 | membrane spanning protein; CTC01088 | N/A | Click |
| 6 | 1157959..1159659 | PHAGE_Clostr_phiCTP1: putative head morphogenesis protein; CTC01089; phage(gi304360668) | 1e-38 | Click |
| 7 | 1160102..1160737 | PHAGE_Clostr_phiCTP1: putative scaffold protein; CTC01090; phage(gi304360672) | 2e-27 | Click |
| 8 | 1160752..1161084 | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp11; CTC01091; phage(gi304360673) | 5e-24 | Click |
| 9 | 1161104..1162138 | PHAGE_Clostr_phiCTP1: hypothetical phage capsid protein; CTC01092; phage(gi304360674) | 2e-117 | Click |
| 10 | 1162684..1163049 | hypothetical protein; CTC01093 | N/A | Click |
| 11 | 1163054..1163398 | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp16; CTC01094; phage(gi304360678) | 2e-14 | Click |
| 12 | 1163403..1163822 | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp17; CTC01095; phage(gi304360679) | 1e-13 | Click |
| 13 | 1163827..1164699 | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp18; CTC01096; phage(gi304360680) | 1e-28 | Click |
| 14 | 1164712..1165176 | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp20; CTC01097; phage(gi304360682) | 5e-28 | Click |
| 15 | 1165343..1165669 | PHAGE_Clostr_phiCTP1: hypothetical protein phiCTP1_gp8; CTC01098; phage(gi304360670) | 1e-08 | Click |
| 16 | 1165727..1167772 | PHAGE_Staphy_3: tail length tape measure protein; CTC01100; phage(gi156604065) | 2e-104 | Click |
| 17 | 1168143..1169258 | hypothetical protein; CTC01101 | N/A | Click |
| 18 | 1169258..1169590 | hypothetical protein; CTC01102 | N/A | Click |
| 19 | 1169603..1170163 | PHAGE_Bacill_36: low copy number virion structural protein; CTC01103; phage(gi156564109) | 2e-05 | Click |
Region 2, total : 26 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1657696..1657707 | attL AATATTTATTTT | N/A | Click |
| 2 | complement(1657784..1658695) | PHAGE_Thermu_26: phage XerD-like integrase; CTC01532; phage(gi157265417) | 4e-14 | Click |
| 3 | complement(1659010..1659636) | stage II sporulation protein M; CTC01533 | N/A | Click |
| 4 | 1659748..1660320 | hypothetical protein; CTC01534 | N/A | Click |
| 5 | complement(1660410..1660886) | hypothetical protein; CTC01535 | N/A | Click |
| 6 | complement(1661019..1663016) | PHAGE_Glossi_virus: hypothetical protein SGHV062; CTC01536; phage(gi168804078) | 2e-10 | Click |
| 7 | complement(1663821..1664825) | PHAGE_Clostr_phiCD6356: probable phage N-acetylmuramoyl-L-alanine amidase; CTC01537; phage(gi326536875) | 9e-12 | Click |
| 8 | complement(1664842..1665195) | PHAGE_Clostr_CD119: putative holin; CTC01538; phage(gi90592670) | 4e-13 | Click |
| 9 | complement(1665626..1666054) | hypothetical protein; CTC01539 | N/A | Click |
| 10 | complement(1666338..1668320) | PHAGE_Bacill_B103: pre-neck appendage protein; CTC01541; phage(gi22855160) | 8e-53 | Click |
| 11 | complement(1668482..1670374) | PHAGE_Bacill_phBC6A52: endopeptidase; CTC01542; phage(gi31415861) | 4e-66 | Click |
| 12 | complement(1670386..1671108) | PHAGE_Clostr_phiCD38_2: tail component protein; CTC01543; phage(gi333798124) | 2e-14 | Click |
| 13 | complement(1671112..1673850) | PHAGE_Geobac_E2: putative tail tape measure protein; CTC01546; phage(gi148747742) | 5e-94 | Click |
| 14 | 1671194..1672327 | PHAGE_Staphy_TEM123: hypothetical protein; CTC01544; phage(gi388570337) | 5e-08 | Click |
| 15 | complement(1673831..1674166) | hypothetical protein; CTC01547 | N/A | Click |
| 16 | 1674185..1674559 | hypothetical protein; CTC01548 | N/A | Click |
| 17 | complement(1674530..1675156) | PHAGE_Lister_P40: gp11; CTC01549; phage(gi207270785) | 2e-18 | Click |
| 18 | complement(1675874..1676203) | hypothetical protein; CTC01550 | N/A | Click |
| 19 | complement(1676218..1676535) | PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp10; CTC01551; phage(gi90592646) | 3e-07 | Click |
| 20 | complement(1676589..1677404) | PHAGE_Staphy_SpaA1: phage coat protein gp6; CTC01552; phage(gi399498871) | 1e-74 | Click |
| 21 | complement(1677494..1678117) | PHAGE_Deep_s_D6E: scaffold protein; CTC01553; phage(gi423262331) | 7e-28 | Click |
| 22 | complement(1678199..1679071) | PHAGE_Clostr_CD119: putative head protein; CTC01554; phage(gi90592642) | 6e-17 | Click |
| 23 | complement(1679064..1680335) | PHAGE_Staphy_SpaA1: phage portal protein, SPP1; CTC01555; phage(gi399498867) | 4e-37 | Click |
| 24 | complement(1680351..1682090) | PHAGE_Bacill_phBC6A51: hypothetical protein BC1891; CTC01556; phage(gi31415785) | 4e-15 | Click |
| 25 | complement(1682210..1682632) | PHAGE_Ralsto_RSM3: hypothetical protein RSM3_gp14; CTC01557; phage(gi209901327) | 1e-13 | Click |
| 26 | complement(1682965..1683393) | hypothetical protein; CTC01558 | N/A | Click |
| 27 | 1683949..1684680 | PHAGE_Shrimp_virus: wsv405; CTC01559; phage(gi17158507) | 8e-05 | Click |
| 28 | 1693071..1693082 | attR AATATTTATTTT | N/A | Click |
Region 3, total : 40 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2248862..2249521) | PHAGE_Clostr_phiMMP04: hypothetical protein; CTC02112; phage(gi414090462) | 6e-18 | Click |
| 2 | complement(2249525..2250214) | hypothetical protein; CTC02113 | N/A | Click |
| 3 | complement(2250183..2251433) | PHAGE_Bacill_BCD7: putative tail fiber protein; CTC02114; phage(gi422936034) | 2e-14 | Click |
| 4 | complement(2251430..2252509) | PHAGE_Clostr_phiMMP04: baseplate J-like assembly protein; CTC02115; phage(gi414090461) | 4e-57 | Click |
| 5 | complement(2252484..2252924) | PHAGE_Clostr_phiMMP04: XkdS-related protein; CTC02116; phage(gi414090460) | 1e-26 | Click |
| 6 | 2253048..2253060 | attL ATTAAATCCTTAA | N/A | Click |
| 7 | complement(2253168..2254262) | PHAGE_Clostr_phiMMP04: cell wall hydrolase; CTC02117; phage(gi414090458) | 1e-10 | Click |
| 8 | complement(2254259..2254705) | PHAGE_Clostr_phiMMP04: peptidoglycan-binding lysin domain protein; CTC02118; phage(gi414090456) | 1e-20 | Click |
| 9 | complement(2254724..2257306) | PHAGE_Clostr_phi3626: putative tape-measure protein; CTC02120; phage(gi20065976) | 1e-113 | Click |
| 10 | complement(2257360..2257737) | hypothetical protein; CTC02121 | N/A | Click |
| 11 | complement(2257924..2258334) | PHAGE_Clostr_CD119: XkdN protein; CTC02122; phage(gi90592652) | 2e-23 | Click |
| 12 | complement(2258513..2258944) | PHAGE_Clostr_phiMMP04: XkdM-related protein; CTC02124; phage(gi414090452) | 2e-06 | Click |
| 13 | complement(2258964..2260025) | PHAGE_Clostr_phiMMP04: tail sheath; CTC02125; phage(gi414090451) | 2e-63 | Click |
| 14 | complement(2260030..2260485) | PHAGE_Clostr_phiMMP04: hypothetical protein; CTC02126; phage(gi414090450) | 1e-11 | Click |
| 15 | complement(2260748..2261179) | PHAGE_Clostr_phiMMP04: hypothetical protein; CTC02127; phage(gi414090449) | 4e-10 | Click |
| 16 | complement(2261154..2261513) | PHAGE_Clostr_phiMMP04: head-tail adaptor; CTC02128; phage(gi414090448) | 9e-08 | Click |
| 17 | complement(2261989..2263095) | PHAGE_Geobac_E2: major capsid protein; CTC02129; phage(gi148747732) | 7e-116 | Click |
| 18 | complement(2263127..2263807) | PHAGE_Strept_1: head maturation protease; CTC02130; phage(gi28876177) | 2e-44 | Click |
| 19 | complement(2263804..2265054) | PHAGE_Geobac_E2: putative portal protein; CTC02131; phage(gi148747730) | 4e-169 | Click |
| 20 | complement(2265048..2266739) | PHAGE_Geobac_E2: putative terminase large subunit; CTC02132; phage(gi148747729) | 8e-75 | Click |
| 21 | complement(2266736..2267206) | PHAGE_Clostr_phi3626: putative terminase small subunit; CTC02133; phage(gi20065964) | 8e-11 | Click |
| 22 | complement(2267273..2267701) | PHAGE_Clostr_phiSM101: HNH endonuclease domain protein; CTC02134; phage(gi110804050) | 9e-39 | Click |
| 23 | 2268063..2268470 | PHAGE_Bacill_phi105: hypothetical protein phi105_48; CTC02135; phage(gi22855041) | 3e-33 | Click |
| 24 | complement(2269616..2270131) | PHAGE_Clostr_phi3626: Gp43 protein; CTC02136; phage(gi20066006) | 5e-06 | Click |
| 25 | complement(2270520..2270909) | PHAGE_Bacill_BCJA1c: hypothetical protein BCBBV1cgp21; CTC02137; phage(gi56694889) | 4e-14 | Click |
| 26 | complement(2271016..2271378) | PHAGE_Clostr_PhiS63: gp30; CTC02138; phage(gi388570657) | 2e-16 | Click |
| 27 | complement(2271462..2272178) | PHAGE_Clostr_phiCD38_2: hypothetical protein; CTC02139; phage(gi333798150) | 1e-55 | Click |
| 28 | complement(2272202..2272585) | PHAGE_Strept_MM1: hypothetical protein MM1p17; CTC02140; phage(gi15088759) | 3e-15 | Click |
| 29 | complement(2272722..2273129) | PHAGE_Clostr_O: hypothetical protein 39-O_gp58; CTC02141; phage(gi208429913) | 1e-05 | Click |
| 30 | complement(2273410..2274306) | PHAGE_Staphy_phiN315: hypothetical protein SA1791; CTC02142; phage(gi30043969) | 1e-42 | Click |
| 31 | complement(2274496..2275302) | PHAGE_Lister_A006: gp42; CTC02144; phage(gi157325459) | 6e-87 | Click |
| 32 | complement(2275304..2276224) | PHAGE_Lister_A006: gp41; CTC02146; phage(gi157325458) | 3e-96 | Click |
| 33 | complement(2276217..2276648) | hypothetical protein; CTC02147 | N/A | Click |
| 34 | complement(2277253..2277675) | hypothetical protein; CTC02148 | N/A | Click |
| 35 | complement(2277927..2278676) | PHAGE_Staphy_phiMR11: putative anti-repressor protein; CTC02149; phage(gi162290113) | 4e-21 | Click |
| 36 | 2279470..2279880 | PHAGE_Lister_A118: putative repressor protein; CTC02150; phage(gi16798819) | 1e-10 | Click |
| 37 | 2279494..2279506 | attR ATTAAATCCTTAA | N/A | Click |
| 38 | 2279888..2281387 | PHAGE_Bacill_WBeta: putative site-specific recombinase; CTC02152; phage(gi85701406) | 1e-35 | Click |
| 39 | complement(2281472..2282092) | PHAGE_Brocho_A9: gp131; CTC02153; phage(gi327197766) | 3e-17 | Click |
| 40 | complement(2282112..2283677) | PHAGE_Cafete_BV_PW1: putative DNA mismatch repair protein MutS; CTC02154; phage(gi310831476) | 3e-13 | Click |
| 41 | complement(2283729..2285480) | PHAGE_Ectoca_1: EsV-1-65; CTC02155; phage(gi13242537) | 1e-13 | Click |
| 42 | complement(2285554..2286339) | PHAGE_Feldma_virus: putative sensor histidine kinase; CTC02156; phage(gi197322366) | 2e-09 | Click |