Definition Escherichia coli CFT073 chromosome, complete genome.
Accession NC_004431
Length 5,231,428
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 243401..244171  PHAGE_Microm_12T: hypothetical protein; c0247; phage(gi472342811)  7e-08  Click
2 complement(244220..245578)  PHAGE_Bacill_Eoghan: cell wall hydrolase/autolysin; c0248; phage(gi460041965)  4e-10  Click
3 complement(245650..246405)  hydroxyacylglutathione hydrolase; c0249  N/A  Click
4 246421..247161  hypothetical protein; c0250  N/A  Click
5 complement(247158..247625)  PHAGE_Salmon_SSU5: putative ribonuclease H; c0251; phage(gi410491500)  3e-52  Click
6 247681..248421  PHAGE_Salmon_SSU5: putative exonuclease; c0252; phage(gi410491496)  2e-09  Click
7 248554..248630  tRNA  N/A  Click
8 248670..249014  hypothetical protein; c0253  N/A  Click
9 complement(248751..248996)  hypothetical protein; c0254  N/A  Click
10 complement(249162..249608)  hypothetical protein; c0255  N/A  Click
11 249923..250144  PHAGE_Stx2_c_1717: truncated transposase; c0256; phage(gi209447151)  3e-05  Click
12 250214..250564  PHAGE_Stx2_c_1717: transposase; c0257; phage(gi209447152)  8e-41  Click
13 250595..251242  PHAGE_Stx2_c_1717: transposase; c0258; phage(gi209447153)  2e-42  Click
14 251193..252143  PHAGE_Stx2_c_1717: transposase; c0259; phage(gi209447153)  2e-96  Click
15 complement(251502..251666)  hypothetical protein; c0260  N/A  Click
16 complement(252253..253386)  PROPHAGE_Shewan_MR-1: IS110 family transposase; c0261; phage(gi24375433)  1e-11  Click
17 253450..253635  PHAGE_Stx2_c_1717: transposase; c0262; phage(gi209447153)  2e-22  Click
18 253783..254469  PROPHAGE_Escher_CFT073: putative transposase; c0263; phage(gi26246170)  3e-135  Click
19 254517..254771  PROPHAGE_Escher_EDL933: putative transposase; c0264; phage(gi15803522)  6e-18  Click
20 complement(254850..255197)  hypothetical protein; c0265  N/A  Click
21 256927..257682  PROPHAGE_Escher_CFT073: transposase/IS protein; c0268; phage(gi26248359)  1e-32  Click
Region 2, total : 48 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 908948..908959  attL    GTGGTGGTTATT  N/A  Click
2 complement(909332..910363)  PHAGE_Entero_2: P2 Int-like protein; c0932; phage(gi169936064)  2e-100  Click
3 complement(910450..911421)  hypothetical protein; c0933  N/A  Click
4 complement(911434..912360)  PHAGE_Entero_2: P2 CI-like protein; c0934; phage(gi169936063)  8e-33  Click
5 912449..912670  PHAGE_Pasteu_F108: Cox; c0935; phage(gi109302900)  1e-06  Click
6 912649..913212  PHAGE_Entero_2: bacteriophage regulatory protein CII; c0936; phage(gi169936061)  1e-83  Click
7 913190..913420  PHAGE_Entero_2: hypothetical protein STM2735.Fels2; c0937; phage(gi169936060)  3e-14  Click
8 913522..913725  PHAGE_Entero_2: hypothetical protein STM2733.Fels2; c0938; phage(gi169936058)  2e-28  Click
9 913787..914026  PHAGE_Entero_2: hypothetical protein STM2732.Fels2; c0939; phage(gi169936057)  8e-28  Click
10 914038..914253  PHAGE_Entero_2: P2 gpOrf82-like protein; c0940; phage(gi169936056)  1e-33  Click
11 914250..915107  PHAGE_Entero_2: DNA adenine methylase-like protein; c0941; phage(gi169936055)  5e-117  Click
12 915104..917518  PHAGE_Entero_2: P2 gpA-like protein; c0942; phage(gi169936054)  0.0  Click
13 917799..918104  PHAGE_Entero_2: TumB protein; c0943; phage(gi169936052)  4e-38  Click
14 918325..918525  hypothetical protein; c0944  N/A  Click
15 918529..919311  PHAGE_Cronob_phiES15: hypothetical protein; c0945; phage(gi401817564)  3e-06  Click
16 919531..920685  hypothetical protein; c0946  N/A  Click
17 complement(920737..921774)  PHAGE_Entero_2: P2 gpQ-like protein; c0947; phage(gi169936049)  2e-171  Click
18 complement(921771..923537)  PHAGE_Entero_2: P2 gpP-like protein; c0948; phage(gi169936048)  0.0  Click
19 complement(923547..923708)  hypothetical protein; c0949  N/A  Click
20 923686..924513  PHAGE_Entero_2: P2 gpO-like protein; c0950; phage(gi169936047)  4e-128  Click
21 complement(924410..925702)  PHAGE_Erwini_ENT90: hypothetical protein; c0951; phage(gi431810946)  8e-06  Click
22 924530..925588  PHAGE_Entero_2: P2 gpN-like major capsid protein; c0952; phage(gi169936046)  4e-178  Click
23 925691..926242  PHAGE_Entero_2: P2 gpM-like protein; c0953; phage(gi169936045)  9e-95  Click
24 926275..926802  PHAGE_Entero_2: P2 gpL-like protein; c0954; phage(gi169936044)  2e-78  Click
25 926802..927005  PHAGE_Entero_2: P2 gpX-like tail protein; c0955; phage(gi169936043)  1e-32  Click
26 927009..927224  PHAGE_Entero_2: lysis protein; c0956; phage(gi169936042)  4e-29  Click
27 927205..927717  PHAGE_Entero_2: endolysin; c0957; phage(gi169936041)  1e-81  Click
28 927677..928096  hypothetical protein; c0958  N/A  Click
29 928093..928521  PHAGE_Entero_2: P2 LysB-like protein; c0959; phage(gi169936038)  3e-57  Click
30 928596..929048  PHAGE_Entero_2: P2 gpR-like tail completion protein; c0960; phage(gi169936036)  9e-72  Click
31 complement(928963..929520)  PHAGE_Erwini_ENT90: hypothetical protein; c0961; phage(gi431810973)  1e-08  Click
32 929041..929487  PHAGE_Entero_2: P2 gpS-like tail completion protein; c0962; phage(gi169936035)  3e-72  Click
33 929556..930134  PHAGE_Entero_2: P2 gpV-like protein; c0963; phage(gi169936034)  2e-96  Click
34 930131..930490  PHAGE_Entero_2: P2 gpW-like baseplate protein; c0964; phage(gi169936033)  5e-52  Click
35 930477..931385  PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; c0965; phage(gi169936032)  2e-146  Click
36 931378..931983  PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; c0966; phage(gi169936031)  2e-109  Click
37 complement(931408..931989)  hypothetical protein; c0967  N/A  Click
38 931980..933419  PHAGE_Entero_2: P2 gpH-like protein; c0968; phage(gi169936030)  4e-122  Click
39 933422..933898  PHAGE_Entero_mEp213: tail fiber assembly protein; c0969; phage(gi428782612)  5e-15  Click
40 complement(933882..934913)  PHAGE_Entero_phiV10: O-acetyltransferase; c0970; phage(gi89152472)  8e-19  Click
41 935127..936299  PHAGE_Entero_2: P2 gpFI-like protein; c0971; phage(gi169936025)  0.0  Click
42 936309..936824  PHAGE_Entero_2: P2 gpFII-like protein; c0972; phage(gi169936024)  4e-91  Click
43 complement(936327..936911)  hypothetical protein; c0973  N/A  Click
44 936879..937181  PHAGE_Entero_2: P2 gpE-like tail protein; c0974; phage(gi169936023)  2e-44  Click
45 complement(936908..937363)  hypothetical protein; c0975  N/A  Click
46 937542..940385  PHAGE_Entero_2: P2 gpT-like tail protein; c0976; phage(gi169936021)  0.0  Click
47 940382..940867  PHAGE_Entero_2: P2 gpU-like tail protein; c0977; phage(gi169936020)  1e-74  Click
48 940864..941964  PHAGE_Entero_2: P2 gpD-like tail protein; c0978; phage(gi169936019)  0.0  Click
49 942022..942273  PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); c0979; phage(gi169936018)  2e-22  Click
50 945468..945479  attR    GTGGTGGTTATT  N/A  Click
Region 3, total : 33 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(920737..921774)  PHAGE_Salmon_RE_2010: capsid packaging protein; c0947; phage(gi418489696)  2e-172  Click
2 complement(921771..923537)  PHAGE_Salmon_RE_2010: terminase ATPase subunit; c0948; phage(gi418489697)  0.0  Click
3 complement(923547..923708)  hypothetical protein; c0949  N/A  Click
4 923686..924513  PHAGE_Salmon_RE_2010: capsid scaffolding protein; c0950; phage(gi418489698)  4e-128  Click
5 complement(924410..925702)  PHAGE_Erwini_ENT90: hypothetical protein; c0951; phage(gi431810946)  8e-06  Click
6 924530..925588  PHAGE_Salmon_RE_2010: major capsid protein; c0952; phage(gi418489699)  0.0  Click
7 925691..926242  PHAGE_Salmon_RE_2010: terminase endonuclease subunit; c0953; phage(gi418489700)  1e-95  Click
8 926275..926802  PHAGE_Salmon_RE_2010: head completion-stabilization protein; c0954; phage(gi418489701)  2e-76  Click
9 926802..927005  PHAGE_Salmon_RE_2010: tail component protein; c0955; phage(gi418489702)  6e-33  Click
10 927009..927224  PHAGE_Salmon_RE_2010: lysis protein S; c0956; phage(gi418489703)  4e-29  Click
11 927205..927717  PHAGE_Salmon_RE_2010: lysozyme; c0957; phage(gi418489704)  3e-89  Click
12 927677..928096  hypothetical protein; c0958  N/A  Click
13 928093..928521  PHAGE_Salmon_RE_2010: lysozyme subunit B; c0959; phage(gi418489705)  2e-53  Click
14 928596..929048  PHAGE_Salmon_RE_2010: tail protein; c0960; phage(gi418489706)  4e-73  Click
15 complement(928963..929520)  PHAGE_Erwini_ENT90: hypothetical protein; c0961; phage(gi431810973)  1e-08  Click
16 929041..929487  PHAGE_Salmon_RE_2010: tail completion protein; c0962; phage(gi418489707)  3e-66  Click
17 929556..930134  PHAGE_Salmon_RE_2010: baseplate assembly protein V; c0963; phage(gi418489709)  2e-96  Click
18 930131..930490  PHAGE_Salmon_RE_2010: baseplate wedge subunit; c0964; phage(gi418489710)  6e-52  Click
19 930477..931385  PHAGE_Salmon_RE_2010: baseplate assembly protein J; c0965; phage(gi418489711)  5e-147  Click
20 931378..931983  PHAGE_Salmon_RE_2010: tail protein I; c0966; phage(gi418489712)  4e-107  Click
21 complement(931408..931989)  hypothetical protein; c0967  N/A  Click
22 931980..933419  PHAGE_Salmon_RE_2010: tail fiber protein; c0968; phage(gi418489713)  1e-122  Click
23 933422..933898  PHAGE_Entero_mEp213: tail fiber assembly protein; c0969; phage(gi428782612)  5e-15  Click
24 complement(933882..934913)  PHAGE_Entero_phiV10: O-acetyltransferase; c0970; phage(gi89152472)  8e-19  Click
25 935127..936299  PHAGE_Salmon_RE_2010: major tail sheath protein; c0971; phage(gi418489720)  0.0  Click
26 936309..936824  PHAGE_Salmon_RE_2010: major tail tube protein; c0972; phage(gi418489721)  3e-90  Click
27 complement(936327..936911)  hypothetical protein; c0973  N/A  Click
28 936879..937181  PHAGE_Salmon_RE_2010: tail protein E; c0974; phage(gi418489722)  7e-43  Click
29 complement(936908..937363)  hypothetical protein; c0975  N/A  Click
30 937542..940385  PHAGE_Salmon_RE_2010: tail tape measure protein; c0976; phage(gi418489724)  0.0  Click
31 940382..940867  PHAGE_Salmon_RE_2010: tail protein; c0977; phage(gi418489725)  4e-75  Click
32 940864..941964  PHAGE_Salmon_RE_2010: gene D protein; c0978; phage(gi418489726)  1e-180  Click
33 942022..942273  PHAGE_Salmon_RE_2010: OGR regulator of late gene transcription; c0979; phage(gi418489727)  1e-22  Click
Region 4, total : 77 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1327914..1327925  attL    CTTTCTCCAAAA  N/A  Click
2 complement(1328014..1329132)  PHAGE_Entero_HK630: integrase; c1400; phage(gi428782814)  6e-46  Click
3 complement(1329101..1329379)  putative excisionase for prophage; c1401  N/A  Click
4 complement(1329432..1331873)  PHAGE_Salmon_SPN3UB: RecE; c1402; phage(gi423262421)  8e-101  Click
5 1331937..1332482  hypothetical protein; c1403  N/A  Click
6 complement(1331967..1332167)  hypothetical protein; c1404  N/A  Click
7 complement(1332155..1332448)  division inhibition protein dicB; c1405  N/A  Click
8 1332454..1332609  hypothetical protein; c1406  N/A  Click
9 complement(1332912..1333130)  hypothetical protein; c1407  N/A  Click
10 complement(1333160..1333330)  hypothetical protein; c1408  N/A  Click
11 complement(1333290..1333526)  PHAGE_Salico_CGphi29: hypothetical protein; c1409; phage(gi472340166)  3e-09  Click
12 complement(1333711..1334130)  PHAGE_Entero_c_1: prophage repressor; c1410; phage(gi428781782)  6e-27  Click
13 1334496..1334921  PHAGE_Pectob_ZF40: putative cII repressor; c1411; phage(gi422936652)  6e-06  Click
14 1335062..1336057  PHAGE_Entero_phiP27: hypothetical protein P27p17; c1412; phage(gi18249881)  6e-29  Click
15 1336098..1336520  hypothetical protein; c1413  N/A  Click
16 1336521..1336934  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip073; c1414; phage(gi20065868)  3e-08  Click
17 complement(1336989..1337126)  hypothetical protein; c1415  N/A  Click
18 1337028..1337210  PHAGE_Entero_phiEF24C: hypothetical protein EFP_gp163; c1416; phage(gi158079459)  1e-07  Click
19 1337203..1337379  PHAGE_Shigel_AG3: hypothetical protein; c1417; phage(gi282599330)  5e-13  Click
20 1337824..1338042  hypothetical protein; c1418  N/A  Click
21 1338495..1338626  hypothetical protein; c1419  N/A  Click
22 complement(1338498..1338659)  hypothetical protein; c1420  N/A  Click
23 1338915..1339193  PHAGE_Cronob_phiES15: hypothetical protein; c1421; phage(gi401817580)  8e-14  Click
24 complement(1338933..1339112)  hypothetical protein; c1422  N/A  Click
25 1339195..1340244  PHAGE_Entero_mEp460: hypothetical protein; c1423; phage(gi428782365)  7e-111  Click
26 1340428..1340613  PHAGE_Escher_HK75: RusA-like protein; c1425; phage(gi356870726)  2e-15  Click
27 1340628..1341449  PHAGE_Entero_HK225: late gene regulator Q; c1426; phage(gi428782441)  3e-88  Click
28 1341649..1342158  PROPHAGE_Salmon_Ty2: transposase; c1427; phage(gi29143766)  8e-84  Click
29 1342304..1342379  tRNA  N/A  Click
30 1342387..1342463  tRNA  N/A  Click
31 1342477..1342553  tRNA  N/A  Click
32 1343053..1343184  hypothetical protein; c1428  N/A  Click
33 complement(1343465..1343800)  PHAGE_Stx2_c_1717: hypothetical protein Stx2-1717_gp43; c1429; phage(gi209447168)  3e-46  Click
34 complement(1343926..1344075)  hypothetical protein; c1430  N/A  Click
35 1344049..1344249  PHAGE_Entero_2008: hypothetical protein YYZ_gp42; c1431; phage(gi209427766)  2e-28  Click
36 1344246..1344407  PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp03; c1432; phage(gi116221995)  2e-16  Click
37 1344452..1344772  PHAGE_Escher_P13374: lysis protein, holin; c1433; phage(gi410491645)  3e-44  Click
38 1344777..1345121  PHAGE_Entero_mEp460: hypothetical protein; c1434; phage(gi428782371)  6e-38  Click
39 complement(1345087..1345365)  hypothetical protein; c1435  N/A  Click
40 1345465..1345998  PHAGE_Entero_mEp460: endolysin; c1436; phage(gi428782372)  2e-100  Click
41 1345980..1346462  PHAGE_Entero_HK620: endopeptidase; c1437; phage(gi13559860)  4e-73  Click
42 1346450..1346602  PHAGE_Entero_Sf6: gene 65 protein; c1438; phage(gi41057338)  3e-23  Click
43 1346769..1347329  PHAGE_Escher_HK639: rha protein; c1439; phage(gi356870673)  8e-97  Click
44 complement(1347632..1348057)  PHAGE_Entero_HK630: hypothetical protein; c1440; phage(gi428782855)  9e-60  Click
45 1348095..1348244  hypothetical protein; c1441  N/A  Click
46 complement(1348100..1348333)  PHAGE_Entero_2008: hypothetical protein YYZ_gp48; c1442; phage(gi209427772)  7e-21  Click
47 1348481..1348606  hypothetical protein; c1443  N/A  Click
48 1348728..1349237  PHAGE_Entero_HK630: terminase small subunit nu1; c1444; phage(gi428782788)  8e-18  Click
49 1349209..1351137  PHAGE_Entero_HK630: terminase large subunit A; terminase; phage large subunit; c1445(gi428782789)  0.0  Click
50 1351121..1351327  PHAGE_Entero_HK630: head-tail connector W; c1446; phage(gi428782790)  6e-12  Click
51 1351324..1352916  PHAGE_Entero_HK630: portal protein B; c1447; phage(gi428782791)  0.0  Click
52 1352906..1354411  PHAGE_Entero_HK630: head maturation protease C; c1448; phage(gi428782792)  3e-107  Click
53 complement(1354427..1354798)  hypothetical protein; c1449  N/A  Click
54 1354448..1354795  PHAGE_Entero_HK630: head decoration protein D; c1450; phage(gi428782794)  2e-23  Click
55 1354853..1355881  PHAGE_Entero_HK630: major head subunit E; c1451; phage(gi428782795)  5e-116  Click
56 1355885..1356316  PHAGE_Entero_HK225: head assembly protein Fi; c1452; phage(gi428782384)  2e-05  Click
57 1356309..1356662  PHAGE_Entero_HK630: head-tail connector Fii; c1453; phage(gi428782797)  4e-43  Click
58 1356678..1357211  PHAGE_Entero_HK630: minor tail protein Z; c1454; phage(gi428782798)  7e-63  Click
59 1357208..1357603  PHAGE_Entero_HK630: minor tail protein U; c1455; phage(gi428782799)  8e-59  Click
60 1357611..1358357  PHAGE_Entero_HK630: major tail protein V; c1456; phage(gi428782800)  3e-106  Click
61 complement(1358354..1359004)  hypothetical protein; c1457  N/A  Click
62 1358376..1358807  PHAGE_Entero_HK630: minor tail protein G; c1458; phage(gi428782801)  4e-45  Click
63 1358834..1359247  PHAGE_Entero_HK630: tail assembly protein GT; c1459; phage(gi428782802)  9e-49  Click
64 1359228..1361789  PHAGE_Entero_HK630: tail length tape measure protein H; c1460; phage(gi428782803)  0.0  Click
65 1361786..1362115  PHAGE_Entero_HK630: minor tail protein M; c1461; phage(gi428782804)  5e-46  Click
66 1362115..1362813  PHAGE_Entero_HK630: minor tail protein L; c1462; phage(gi428782805)  6e-106  Click
67 complement(1362166..1362969)  hypothetical protein; c1463  N/A  Click
68 1362864..1363562  PHAGE_Entero_mEp460: tail fiber component; c1464; phage(gi428782332)  1e-134  Click
69 1363526..1364140  PHAGE_Stx2_c_1717: putative tail component; c1465; phage(gi209447195)  5e-109  Click
70 1364484..1368176  PHAGE_Entero_2008: phage-related tail protein; c1466; phage(gi209427791)  0.0  Click
71 1368244..1368843  PHAGE_Entero_cdtI: putative Lom-like outer membrane protein; c1467; phage(gi148609401)  6e-98  Click
72 1368995..1371058  PHAGE_Escher_bV_EcoS_AKFV33: putative tail fiber protein; c1468; phage(gi388570497)  6e-80  Click
73 complement(1369339..1369503)  hypothetical protein; c1469  N/A  Click
74 1371055..1371333  hypothetical protein; c1470  N/A  Click
75 1371343..1371636  PHAGE_Halomo_1: hypothetical protein HAPgp19; c1471; phage(gi167832364)  9e-08  Click
76 complement(1371423..1371797)  hypothetical protein; c1472  N/A  Click
77 1371747..1371872  hypothetical protein; c1473  N/A  Click
78 complement(1371829..1372494)  hypothetical protein; c1474  N/A  Click
79 1372554..1372820  PHAGE_Entero_HK630: tail fiber assembly protein; c1475; phage(gi428782810)  2e-20  Click
80 1372942..1372953  attR    CTTTCTCCAAAA  N/A  Click
81 complement(1373052..1373915)  spermidine/putrescine ABC transporter membrane protein; c1476  N/A  Click
82 complement(1373899..1375035)  PHAGE_Plankt_PaV_LD: ABC transporter; c1477; phage(gi371496158)  7e-27  Click
Region 5, total : 17 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1377873..1377903  attL    GTGCAACGATCGGTGTAGTTAATGGTGTAGT  N/A  Click
2 1378215..1379159  PHAGE_Entero_cdtI: Phage integrase; c1483; phage(gi148609414)  2e-39  Click
3 complement(1379245..1379370)  hypothetical protein; c1485  N/A  Click
4 complement(1379395..1379535)  hypothetical protein; c1486  N/A  Click
5 1379766..1381052  PHAGE_Aggreg_S1249: putative antirepressor protein Ant; c1487; phage(gi273809579)  6e-06  Click
6 1381049..1381279  PHAGE_Salmon_1: hypothetical protein STM0898.6n.Fels1; c1488; phage(gi169257169)  2e-07  Click
7 complement(1381242..1381601)  hypothetical protein; c1489  N/A  Click
8 1381269..1381490  hypothetical protein; c1490  N/A  Click
9 1381465..1381704  hypothetical protein; c1491  N/A  Click
10 1381706..1381939  hypothetical protein; c1492  N/A  Click
11 1381945..1382244  hypothetical protein; c1493  N/A  Click
12 complement(1381966..1382253)  hypothetical protein; c1494  N/A  Click
13 1382241..1383995  PHAGE_Entero_P4: DNA primase; c1495; phage(gi9627512)  9e-93  Click
14 1384284..1384541  hypothetical protein; c1496  N/A  Click
15 1384538..1384948  PHAGE_Pseudo_F116: single-stranded DNA-binding protein; c1497; phage(gi56692915)  4e-10  Click
16 1385462..1385668  hypothetical protein; c1498  N/A  Click
17 1385668..1386723  PHAGE_Gifsy_1: bacteriophage major capsid protein; Lambda gpE homolog; c1499; phage(gi169257230)  5e-83  Click
18 1386735..1387070  PHAGE_Entero_mEp237: head decoration protein; c1500; phage(gi435439271)  2e-07  Click
19 1389092..1389122  attR    GTGCAACGATCGGTGTAGTTAATGGTGTAGT  N/A  Click
Region 6, total : 85 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1394721..1395182)  PHAGE_Vibrio_KVP40: NMN adenylyl tranferase; c1513; phage(gi34419395)  6e-05  Click
2 complement(1395370..1395726)  hypothetical protein; c1514  N/A  Click
3 1395766..1395888  hypothetical protein; c1515  N/A  Click
4 complement(1395934..1397115)  hypothetical protein; c1516  N/A  Click
5 1396018..1397268  isocitrate dehydrogenase; c1517  N/A  Click
6 1397292..1397319  attL    AACGGGCGTATAACACGCCCGTTGTTTT  N/A  Click
7 1397313..1397456  hypothetical protein; c1518  N/A  Click
8 complement(1397370..1398512)  PHAGE_Entero_mEp235: integrase; c1519; phage(gi428781836)  2e-61  Click
9 1398656..1398982  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; c1520; phage(gi157166066)  2e-57  Click
10 1398979..1399869  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; c1521; phage(gi157166067)  1e-172  Click
11 complement(1400191..1400430)  PHAGE_Entero_phiP27: hypothetical protein P27p03; c1522; phage(gi18249867)  2e-07  Click
12 complement(1400456..1400824)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip086; c1523; phage(gi20065881)  4e-47  Click
13 complement(1400733..1401473)  PHAGE_Entero_P22: EaA; c1524; phage(gi9635497)  2e-55  Click
14 complement(1401470..1401721)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip092; c1525; phage(gi20065887)  1e-34  Click
15 complement(1401681..1402241)  PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp45; c1526; phage(gi116222037)  1e-20  Click
16 complement(1402232..1402507)  PHAGE_Entero_cdtI: Valyl-tRNA synthetase; c1527; phage(gi148609417)  2e-36  Click
17 complement(1402488..1402817)  hypothetical protein; c1528  N/A  Click
18 complement(1402870..1403625)  PROPHAGE_Escher_CFT073: transposase/IS protein; c1529; phage(gi26248359)  1e-32  Click
19 complement(1403622..1405121)  hypothetical protein; c1530  N/A  Click
20 complement(1405210..1405668)  PHAGE_Entero_mEpX1: hypothetical protein; c1531; phage(gi428781901)  6e-60  Click
21 complement(1405985..1406266)  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip098; c1532; phage(gi20065893)  5e-48  Click
22 complement(1406441..1406629)  PHAGE_Entero_lambda: hypothetical protein lambdap39; c1533; phage(gi9626279)  3e-28  Click
23 complement(1406620..1407300)  PHAGE_Entero_lambda: exonuclease; c1534; phage(gi9626280)  8e-130  Click
24 1406629..1406940  hypothetical protein; c1535  N/A  Click
25 complement(1407297..1408082)  PHAGE_Entero_lambda: bet; c1536; phage(gi9626281)  7e-151  Click
26 complement(1408088..1408384)  PHAGE_Stx2_c_86: host-nuclease inhibitor protein Gam; c1537; phage(gi116222045)  8e-52  Click
27 complement(1408353..1408505)  PHAGE_Entero_lambda: host-nuclease inhibitor protein Gam; c1538; phage(gi9626282)  5e-14  Click
28 complement(1408460..1408603)  PHAGE_Entero_lambda: host-killing protein; c1539; phage(gi9626283)  4e-20  Click
29 complement(1408572..1408736)  PHAGE_Entero_HK630: CIII protein; c1540; phage(gi428782826)  5e-27  Click
30 complement(1408809..1409177)  PHAGE_Entero_lambda: Putative single-stranded DNA binding protein; c1541; phage(gi9626285)  2e-68  Click
31 complement(1409360..1409560)  PHAGE_Entero_lambda: restriction alleviation protein; c1542; phage(gi9626286)  1e-34  Click
32 1409774..1410355  PHAGE_Entero_HK140: superinfection exclusion protein; c1543; phage(gi428781984)  4e-101  Click
33 complement(1411081..1411833)  PHAGE_Burkho_2: gp47, conserved hypothetical protein; c1544; phage(gi134288670)  6e-06  Click
34 complement(1411830..1412387)  hypothetical protein; c1545  N/A  Click
35 complement(1412427..1412849)  PHAGE_Stx2_c_II: CI protein; c1546; phage(gi302393138)  8e-77  Click
36 1413040..1413420  PHAGE_Stx2_c_II: Cro protein; c1547; phage(gi302393139)  2e-36  Click
37 1413562..1413858  PHAGE_Entero_Min27: regulatory protein CII; c1548; phage(gi170783637)  2e-46  Click
38 1413891..1414790  PHAGE_Entero_lambda: DNA replication protein; c1549; phage(gi9626295)  3e-174  Click
39 1414787..1415488  PHAGE_Entero_lambda: DNA replication protein; c1550; phage(gi9626296)  6e-128  Click
40 1415485..1415775  PHAGE_Entero_lambda: ren exclusion protein; c1551; phage(gi9626297)  1e-48  Click
41 1415867..1416193  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; c1552; phage(gi157166066)  2e-57  Click
42 1416190..1417080  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; c1553; phage(gi157166067)  1e-172  Click
43 1417162..1417602  PHAGE_Entero_lambda: NinB; c1554; phage(gi9626298)  9e-82  Click
44 1417569..1418126  PHAGE_Entero_c_1: DNA N-6-adenine-methyltransferase; c1555; phage(gi428781789)  8e-105  Click
45 1418302..1418643  PHAGE_Salmon_ST160: NinX; c1556; phage(gi318065936)  1e-62  Click
46 1418850..1419212  PHAGE_Entero_mEp237: Holliday junction resolvase RusA; c1557; phage(gi435439318)  5e-62  Click
47 1419209..1419349  PHAGE_Entero_mEp237: hypothetical protein; c1558; phage(gi435439319)  2e-09  Click
48 1419420..1419818  PHAGE_Entero_2008: antitermination protein Q; c1559; phage(gi209427762)  2e-56  Click
49 complement(1420007..1421149)  outer membrane porin protein nmpC; c1560  N/A  Click
50 1421678..1421893  PHAGE_Stx2_c_II: holin; c1561; phage(gi302393164)  1e-28  Click
51 1421893..1422390  PHAGE_Entero_cdtI: lysin; c1562; phage(gi148609440)  2e-91  Click
52 1422375..1422848  PHAGE_Entero_lambda: cell lysis protein; c1563; phage(gi9626310)  3e-80  Click
53 complement(1422880..1423221)  PHAGE_Entero_lambda: Bor protein precursor; c1564; phage(gi19263395)  4e-47  Click
54 1423600..1423980  tonB-like membrane protein encoded within prophage; c1565  N/A  Click
55 complement(1423628..1423780)  hypothetical protein; c1566  N/A  Click
56 1424187..1424369  hypothetical protein; c1567  N/A  Click
57 1424932..1425480  PHAGE_Gifsy_1: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; c1568; phage(gi169257236)  4e-66  Click
58 1425428..1427380  PHAGE_Entero_lambda: DNA packaging protein; terminase; phage large subunit; c1569(gi9626245)  0.0  Click
59 1427364..1427570  PHAGE_Entero_mEp237: head-tail connector; c1570; phage(gi435439268)  9e-13  Click
60 1427567..1429159  PHAGE_Gifsy_1: bacteriophage portal protein; Lambda gpB homolog; c1571; phage(gi169257233)  0.0  Click
61 1429149..1430654  PHAGE_Entero_lambda: capsid component; c1572; phage(gi9626248)  2e-107  Click
62 complement(1430670..1431041)  hypothetical protein; c1573  N/A  Click
63 1430691..1431038  PHAGE_Entero_lambda: head-DNA stabilization protein; c1574; phage(gi9626250)  2e-24  Click
64 1431096..1432124  PHAGE_Entero_lambda: capsid component; c1575; phage(gi9626251)  6e-117  Click
65 1432128..1432550  PHAGE_Entero_HK225: head assembly protein Fi; c1576; phage(gi428782384)  1e-07  Click
66 1432522..1432896  PHAGE_Entero_lambda: head-tail joining protein; c1577; phage(gi9626253)  9e-40  Click
67 1432908..1433486  PHAGE_Entero_lambda: tail component; c1578; phage(gi9626254)  2e-100  Click
68 1433483..1433878  PHAGE_Entero_lambda: tail component; c1579; phage(gi9626255)  2e-70  Click
69 1433856..1434020  PHAGE_Entero_lambda: tail component; c1580; phage(gi9626256)  4e-17  Click
70 complement(1434181..1434612)  hypothetical protein; c1581  N/A  Click
71 1434638..1435060  PHAGE_Entero_lambda: tail component; c1583; phage(gi9626257)  1e-69  Click
72 1435042..1435476  PHAGE_Entero_lambda: tail component; c1584; phage(gi9626258)  2e-78  Click
73 1435469..1438030  PHAGE_Entero_lambda: tail component; c1585; phage(gi9626259)  0.0  Click
74 complement(1438260..1438910)  hypothetical protein; c1586  N/A  Click
75 1438356..1439054  PHAGE_Entero_lambda: tail component; c1587; phage(gi9626261)  8e-133  Click
76 1439060..1439803  PHAGE_Entero_mEp460: tail fiber component; c1588; phage(gi428782332)  7e-148  Click
77 1439740..1440372  PHAGE_Entero_lambda: tail component; c1589; phage(gi9626263)  1e-113  Click
78 1440433..1443915  PHAGE_Entero_lambda: tail:host specificity protein; c1590; phage(gi9626264)  0.0  Click
79 1443968..1445635  PHAGE_Entero_mEp460: side tail fiber protein; c1591; phage(gi428782336)  2e-77  Click
80 complement(1444336..1444590)  PHAGE_Entero_lambda: hypothetical protein lambdap90; c1592; phage(gi9626267)  1e-07  Click
81 1445744..1446034  PHAGE_Escher_bV_EcoS_AKFV33: putative tail fiber protein; c1593; phage(gi388570497)  4e-05  Click
82 1446031..1446309  PHAGE_Escher_bV_EcoS_AKFV33: hypothetical protein; c1594; phage(gi388570496)  8e-06  Click
83 1446322..1446615  PHAGE_Halomo_1: hypothetical protein HAPgp19; c1595; phage(gi167832364)  2e-07  Click
84 complement(1446337..1446777)  hypothetical protein; c1596  N/A  Click
85 complement(1446707..1447564)  SitD protein; c1597  N/A  Click
86 complement(1447561..1448418)  SitC protein; c1598  N/A  Click
87 complement(1448415..1449242)  PHAGE_Plankt_PaV_LD: ABC transporter; c1599; phage(gi371496158)  9e-14  Click
88 1452255..1452282  attR    AACGGGCGTATAACACGCCCGTTGTTTT  N/A  Click
Region 7, total : 61 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3007212..3007226  attL    TTAATAATGTTGCTC  N/A  Click
2 3019963..3020169  PHAGE_Entero_mEp460: DinI-like protein; c3144; phage(gi428782337)  6e-33  Click
3 3020745..3021011  hypothetical protein; c3145  N/A  Click
4 3021386..3021976  PHAGE_Escher_D108: G region invertase; c3146; phage(gi281199698)  7e-25  Click
5 complement(3022204..3022497)  PHAGE_Halomo_1: hypothetical protein HAPgp19; c3147; phage(gi167832364)  6e-07  Click
6 complement(3022540..3023580)  PHAGE_Entero_mEp460: side tail fiber protein; c3148; phage(gi428782336)  2e-50  Click
7 complement(3023590..3023871)  hypothetical protein; c3149  N/A  Click
8 complement(3023868..3026297)  PHAGE_Entero_mEp460: side tail fiber protein; c3150; phage(gi428782336)  3e-104  Click
9 3025462..3025902  PHAGE_Entero_lambda: hypothetical protein lambdap90; c3151; phage(gi9626267)  4e-12  Click
10 complement(3026388..3026897)  PROPHAGE_Salmon_Ty2: transposase; c3152; phage(gi29143766)  3e-85  Click
11 complement(3027043..3027642)  PHAGE_Entero_mEp460: Lom protein; c3153; phage(gi428782335)  6e-100  Click
12 complement(3027710..3031189)  PHAGE_Entero_mEp460: host specificity protein; c3154; phage(gi428782334)  0.0  Click
13 complement(3031250..3031882)  PHAGE_Entero_HK630: tail component I; c3155; phage(gi428782807)  7e-114  Click
14 complement(3031819..3032604)  PHAGE_Entero_mEp460: tail fiber component; c3156; phage(gi428782332)  3e-143  Click
15 3032561..3033367  hypothetical protein; c3157  N/A  Click
16 complement(3032567..3033265)  PHAGE_Entero_mEp460: minor tail protein; c3158; phage(gi428782331)  2e-126  Click
17 complement(3033265..3033594)  PHAGE_Entero_HK630: minor tail protein M; c3159; phage(gi428782804)  4e-56  Click
18 complement(3033591..3036152)  PHAGE_Entero_HK630: tail length tape measure protein H; c3160; phage(gi428782803)  0.0  Click
19 complement(3036145..3036579)  PHAGE_Entero_HK630: tail assembly protein GT; c3161; phage(gi428782802)  1e-79  Click
20 complement(3036561..3036983)  PHAGE_Entero_HK630: minor tail protein G; c3162; phage(gi428782801)  5e-72  Click
21 complement(3036999..3037769)  PHAGE_Entero_HK630: major tail protein V; c3163; phage(gi428782800)  2e-140  Click
22 complement(3037747..3038142)  PHAGE_Entero_HK630: minor tail protein U; c3164; phage(gi428782799)  6e-71  Click
23 complement(3038139..3038717)  PHAGE_Entero_HK630: minor tail protein Z; c3165; phage(gi428782798)  7e-101  Click
24 complement(3038729..3039082)  PHAGE_Entero_HK630: head-tail connector Fii; c3166; phage(gi428782797)  1e-61  Click
25 complement(3039094..3039528)  PHAGE_Entero_HK225: head assembly protein Fi; c3167; phage(gi428782384)  7e-21  Click
26 complement(3039531..3040556)  PHAGE_Entero_HK630: major head subunit E; c3168; phage(gi428782795)  0.0  Click
27 complement(3040611..3040949)  PHAGE_Entero_HK630: head decoration protein D; c3169; phage(gi428782794)  8e-57  Click
28 complement(3040953..3042386)  PHAGE_Entero_HK630: head maturation protease C; c3170; phage(gi428782792)  0.0  Click
29 complement(3042253..3043854)  PHAGE_Entero_HK630: portal protein B; c3171; phage(gi428782791)  0.0  Click
30 complement(3043851..3044057)  PHAGE_Entero_HK630: head-tail connector W; c3172; phage(gi428782790)  4e-32  Click
31 complement(3044054..3045979)  PHAGE_Entero_HK630: terminase large subunit A; c3173; phage(gi428782789)  0.0  Click
32 complement(3045954..3046499)  PHAGE_Entero_HK630: terminase small subunit nu1; c3174; phage(gi428782788)  2e-92  Click
33 3046059..3046598  hypothetical protein; c3175  N/A  Click
34 complement(3047835..3048008)  GnsB protein; c3176  N/A  Click
35 complement(3048683..3048898)  PHAGE_Lactoc_bIL312: Csp; c3177; phage(gi13095918)  1e-15  Click
36 complement(3048917..3049075)  hypothetical protein; c3178  N/A  Click
37 complement(3049260..3049757)  PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; c3179; phage(gi16765210)  2e-53  Click
38 complement(3049754..3050287)  PHAGE_Entero_mEp460: endolysin; c3180; phage(gi428782372)  1e-97  Click
39 complement(3050609..3051181)  PHAGE_Entero_mEp460: hypothetical protein; c3181; phage(gi428782371)  4e-35  Click
40 complement(3051165..3051380)  PHAGE_Entero_mEp460: porin; c3182; phage(gi428782370)  9e-32  Click
41 complement(3051753..3051884)  hypothetical protein; c3183  N/A  Click
42 complement(3052133..3052348)  PHAGE_Lactoc_bIL312: Csp; c3184; phage(gi13095918)  2e-16  Click
43 3052649..3052861  cold shock-like protein cspF; c3185  N/A  Click
44 complement(3053277..3054059)  PHAGE_Entero_mEp460: late gene regulator; c3186; phage(gi428782366)  4e-140  Click
45 complement(3054043..3055038)  PHAGE_Entero_mEp460: hypothetical protein; c3187; phage(gi428782365)  0.0  Click
46 complement(3055040..3055837)  PHAGE_Entero_mEp460: KilA-N domain protein; c3188; phage(gi428782364)  3e-130  Click
47 complement(3055857..3056246)  PHAGE_Entero_mEp460: holliday junction resolvase; c3189; phage(gi428782363)  2e-69  Click
48 complement(3056243..3056602)  PHAGE_Entero_mEp460: LexA DNA binding domain protein; c3190; phage(gi428782362)  5e-54  Click
49 complement(3056569..3057063)  PHAGE_Entero_mEp460: hypothetical protein; c3191; phage(gi428782360)  5e-86  Click
50 complement(3057060..3058001)  PHAGE_Entero_phiP27: hypothetical protein P27p17; c3192; phage(gi18249881)  6e-41  Click
51 3057572..3057739  hypothetical protein; c3193  N/A  Click
52 complement(3057578..3057760)  hypothetical protein; c3194  N/A  Click
53 complement(3058346..3058954)  PHAGE_Entero_mEp460: hypothetical protein; c3195; phage(gi428782356)  6e-93  Click
54 complement(3058935..3059135)  PHAGE_Entero_mEp390: prophage anti-repressor; c3196; phage(gi428782702)  2e-07  Click
55 3059233..3059859  PHAGE_Entero_mEp235: prophage repressor; c3197; phage(gi428781850)  4e-48  Click
56 complement(3060075..3060587)  hypothetical protein; c3198  N/A  Click
57 complement(3060560..3061243)  PHAGE_Entero_mEp460: hypothetical protein; c3199; phage(gi428782352)  9e-14  Click
58 3060731..3061417  PHAGE_Entero_mEp460: hypothetical protein; c3200; phage(gi428782351)  1e-61  Click
59 3061483..3062307  PHAGE_Entero_mEp460: hypothetical protein; c3201; phage(gi428782350)  1e-151  Click
60 3062408..3062959  PHAGE_Entero_mEp460: hypothetical protein; c3202; phage(gi428782349)  4e-95  Click
61 3063044..3063934  hypothetical protein; c3203  N/A  Click
62 3063931..3063945  attR    TTAATAATGTTGCTC  N/A  Click
63 3064143..3065315  PHAGE_Cronob_phiES15: putative integrase; c3204; phage(gi401817566)  8e-148  Click
Region 8, total : 10 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4955798..4955809  attL    AAATGAACTGGT  N/A  Click
2 complement(4962202..4962357)  PHAGE_Lactob_AQ113: co-activator of prophage gene expression; c5207; phage(gi446730265)  1e-06  Click
3 complement(4962284..4962847)  PHAGE_Lactob_AQ113: co-activator of prophage gene expression; c5208; phage(gi446730265)  5e-19  Click
4 complement(4962832..4964064)  PHAGE_Lactob_AQ113: phosphoadenosine phosphosulfate reductase; c5209; phage(gi446730264)  2e-55  Click
5 complement(4964200..4964853)  hypothetical protein; c5210  N/A  Click
6 complement(4965038..4966498)  PHAGE_Entero_P2: Old; c5211; phage(gi9630369)  4e-07  Click
7 4965775..4965957  hypothetical protein; c5212  N/A  Click
8 complement(4966657..4967547)  PROPHAGE_Escher_CFT073: transposase IS629; c5213; phage(gi26251021)  2e-173  Click
9 complement(4967544..4967870)  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; c5214; phage(gi157166066)  2e-57  Click
10 complement(4967922..4969685)  hypothetical protein; c5215  N/A  Click
11 4969791..4969802  attR    AAATGAACTGGT  N/A  Click
12 complement(4970125..4971387)  PROPHAGE_Escher_CFT073: prophage P4 integrase; c5216; phage(gi26251024)  0.0  Click