Definition Shigella flexneri 2a str. 301, complete genome.
Accession NC_004337
Length 4,607,203
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 235830..236240  PROPHAGE_Escher_CFT073: transposase insC; SF0209; phage(gi26249447)  3e-52  Click
2 236198..237103  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SF0210; phage(gi24111655)  4e-179  Click
3 complement(237160..237447)  hypothetical protein; SF0211  N/A  Click
4 complement(237461..237982)  PHAGE_Entero_Sf6: putative transposase OrfB; SF0212; phage(gi41057343)  4e-104  Click
5 complement(237951..238301)  PHAGE_Entero_Sf6: putative transposase OrfB; SF0213; phage(gi41057343)  6e-58  Click
6 complement(238328..238666)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SF0214; phage(gi24373865)  2e-09  Click
7 238841..239743  PHAGE_Entero_IME10: terminase large subunit; SF0215; phage(gi422934280)  0.0  Click
8 239744..241909  PHAGE_Entero_IME10: portal protein; SF0216; phage(gi422934281)  0.0  Click
9 241923..242834  PHAGE_Entero_IME10: scaffolding protein; SF0217; phage(gi422934282)  4e-168  Click
10 242834..244129  PHAGE_Entero_IME10: coat protein; SF0218; phage(gi422934283)  0.0  Click
11 244174..244404  PHAGE_Salmon_SPN9CC: hypothetical protein; SF0219; phage(gi389060541)  3e-05  Click
12 244382..244882  PHAGE_Entero_IME10: DNA stabilization protein; SF0220; phage(gi422934284)  8e-94  Click
13 244882..246300  PHAGE_Entero_IME10: DNA stabilization protein; SF0221; phage(gi422934285)  0.0  Click
14 246300..247148  PHAGE_Entero_P22: head completion protein; SF0222; phage(gi51236728)  1e-38  Click
15 247148..247603  PHAGE_Entero_IME10: head assembly protein; SF0223; phage(gi422934287)  6e-87  Click
16 247606..248298  PHAGE_Entero_IME10: DNA transfer protein; SF0224; phage(gi422934288)  4e-127  Click
17 248308..249639  PHAGE_Entero_IME10: gp20; SF0225; phage(gi422934289)  0.0  Click
18 249640..251370  PHAGE_Entero_P22: injection protein; SF0226; phage(gi51236731)  4e-58  Click
19 251496..251822  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SF0227; phage(gi157166066)  2e-56  Click
20 252037..252705  PROPHAGE_Escher_CFT073: transposase IS629; SF0228; phage(gi26250986)  1e-122  Click
Region 2, total : 31 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 306583..306594  attL    CATCCGGCAATA  N/A  Click
2 308132..308527  PROPHAGE_Escher_MG1655: IS1 transposase B; SF0291; phage(gi16131317)  3e-68  Click
3 308718..309821  gamma-glutamyl kinase; SF0292  N/A  Click
4 309833..311086  gamma-glutamyl phosphate reductase; SF0293  N/A  Click
5 311201..311276  tRNA  N/A  Click
6 complement(311291..311755)  PHAGE_Entero_SfV: integrase; SF0294; phage(gi19549014)  4e-82  Click
7 complement(311782..312600)  PROPHAGE_Escher_CFT073: transposase insF; SF0295; phage(gi26249410)  1e-157  Click
8 complement(312636..312938)  PROPHAGE_Xantho_33913: ISxac3 transposase; SF0296; phage(gi21231087)  1e-09  Click
9 complement(312995..313720)  PHAGE_Entero_SfV: integrase; SF0297; phage(gi19549014)  7e-137  Click
10 complement(313947..314252)  PHAGE_Entero_SfV: hypothetical protein SfVp28; SF0298; phage(gi19549015)  1e-53  Click
11 complement(314252..314629)  PHAGE_Entero_SfV: hypothetical protein SfVp29; SF0299; phage(gi19549016)  9e-56  Click
12 complement(314595..315263)  PROPHAGE_Escher_CFT073: transposase IS629; SF0300; phage(gi26250986)  7e-122  Click
13 315442..315478  attL    CCCCGTACTGCTCACGCAGCTTATCCAGCAGTGGCAT  N/A  Click
14 complement(315478..315804)  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SF0301; phage(gi157166066)  1e-55  Click
15 316047..316349  PROPHAGE_Xantho_33913: ISxac3 transposase; SF0302; phage(gi21231087)  1e-09  Click
16 316385..317203  PROPHAGE_Escher_CFT073: transposase insF; SF0303; phage(gi26249410)  1e-157  Click
17 317312..317605  PHAGE_Escher_HK75: phage integrase family protein; SF0304; phage(gi356870702)  5e-52  Click
18 317742..317753  attL    AAAGCCTTGCAA  N/A  Click
19 317867..318229  PHAGE_Entero_SfV: putative flippase; SF0305; phage(gi19549013)  1e-63  Click
20 318226..319155  PHAGE_Entero_SfV: bactoprenol glucosyltransferase; SF0306; phage(gi19549012)  3e-171  Click
21 319152..320612  PHAGE_Entero_phiEf11: putative membrane protein; SF0307; phage(gi282598720)  7e-17  Click
22 complement(321002..322192)  PROPHAGE_Shewan_MR-1: ISSod3, transposase; SF0308; phage(gi24375070)  2e-50  Click
23 322643..323692  hypothetical protein; SF0309  N/A  Click
24 complement(324465..324899)  PHAGE_Entero_SfV: tail fibre assembly protein; SF0310; phage(gi19549010)  3e-72  Click
25 complement(324871..325521)  PHAGE_Entero_SfV: hypothetical protein SfVp21; SF0311; phage(gi19548989)  3e-116  Click
26 complement(325574..326392)  PROPHAGE_Escher_CFT073: transposase insF; SF0312; phage(gi26249410)  2e-158  Click
27 complement(326428..326730)  PROPHAGE_Xantho_33913: ISxac3 transposase; SF0313; phage(gi21231087)  3e-09  Click
28 326916..328079  PHAGE_Entero_SfV: integrase; SF0314; phage(gi19549014)  0.0  Click
29 328305..328316  attR    AAAGCCTTGCAA  N/A  Click
30 328428..329600  PHAGE_Escher_TL_2011b: hypothetical protein; SF0315; phage(gi418487678)  6e-13  Click
31 complement(329654..330277)  PHAGE_Synech_Syn5: tail fiber; SF0316; phage(gi148724489)  1e-05  Click
32 complement(330404..331222)  PROPHAGE_Escher_CFT073: transposase insF; SF0317; phage(gi26249410)  1e-157  Click
33 complement(331258..331620)  PROPHAGE_Xantho_33913: ISxac3 transposase; SF0318; phage(gi21231087)  1e-08  Click
34 complement(331586..332254)  PROPHAGE_Escher_CFT073: transposase IS629; SF0319; phage(gi26250986)  2e-124  Click
35 332433..332469  attR    CCCCGTACTGCTCACGCAGCTTATCCAGCAGTGGCAT  N/A  Click
36 complement(332469..332795)  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SF0320; phage(gi157166066)  1e-53  Click
37 332946..334061  PHAGE_Pseudo_MP1412: diguanylate-cyclase GGDEF domain; SF0321; phage(gi399529005)  9e-05  Click
38 340775..340786  attR    CATCCGGCAATA  N/A  Click
Region 3, total : 64 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(696659..697168)  PHAGE_Pseudo_MP22: transposase A; SF0661; phage(gi157834977)  2e-06  Click
2 697731..699185  PHAGE_Entero_Mu: transposase; SF0662; phage(gi9633496)  0.0  Click
3 699247..699549  PROPHAGE_Xantho_33913: ISxac3 transposase; SF0663; phage(gi21231087)  1e-09  Click
4 699585..700403  PROPHAGE_Escher_CFT073: transposase insF; SF0664; phage(gi26249410)  1e-156  Click
5 700415..700690  hypothetical protein; SF0665  N/A  Click
6 complement(700687..701628)  PHAGE_Vibrio_CP_T1: putative major capsid protein; SF0666; phage(gi418489228)  1e-15  Click
7 complement(701773..702129)  putative bacteriophage protein; SF0667  N/A  Click
8 complement(702133..703353)  PHAGE_Pectob_ZF40: putative head protein; SF0668; phage(gi422936684)  4e-18  Click
9 complement(703357..703815)  PROPHAGE_Deinoc_R1: head morphogenesis protein, putative; SF0669; phage(gi15807765)  3e-13  Click
10 complement(703991..705457)  PHAGE_Vibrio_CP_T1: putative portal protein; SF0670; phage(gi418489212)  1e-40  Click
11 complement(705678..706217)  PHAGE_Psychr_pOW20_A: phage terminase large subunit; SF0671; phage(gi472339822)  5e-44  Click
12 complement(706202..707107)  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SF0672; phage(gi24111655)  6e-179  Click
13 complement(707065..707430)  PROPHAGE_Escher_CFT073: transposase insC; SF0673; phage(gi26249447)  2e-45  Click
14 complement(707506..708129)  PHAGE_Psychr_pOW20_A: phage terminase large subunit; SF0674; phage(gi472339822)  2e-80  Click
15 complement(708140..708904)  PHAGE_Escher_TL_2011c: putative terminase small subunit; SF0675; phage(gi418487072)  6e-17  Click
16 709099..709611  hypothetical protein; SF0676  N/A  Click
17 709982..710320  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SF0677; phage(gi24373865)  2e-09  Click
18 710347..711186  PHAGE_Entero_Sf6: putative transposase OrfB; SF0678; phage(gi41057343)  8e-170  Click
19 711215..711637  putative bacteriophage protein; SF0679  N/A  Click
20 711827..711903  tRNA  N/A  Click
21 711905..711981  tRNA  N/A  Click
22 711984..712058  tRNA  N/A  Click
23 712062..712136  tRNA  N/A  Click
24 complement(712950..713768)  PROPHAGE_Escher_CFT073: transposase insF; SF0680; phage(gi26249410)  1e-157  Click
25 complement(713804..714106)  PROPHAGE_Xantho_33913: ISxac3 transposase; SF0681; phage(gi21231087)  1e-09  Click
26 714382..716241  PHAGE_Entero_Min27: putative replication protein P; SF0682; phage(gi170783639)  0.0  Click
27 complement(716216..717055)  PHAGE_Entero_Sf6: putative transposase OrfB; SF0683; phage(gi41057343)  8e-170  Click
28 complement(717082..717420)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SF0685; phage(gi24373865)  2e-09  Click
29 717477..718355  PHAGE_Entero_phiP27: putative replication protein DnaC; SF0684; phage(gi18249882)  2e-140  Click
30 718352..719743  PHAGE_Entero_phiP27: putative helicase; SF0686; phage(gi18249883)  0.0  Click
31 719740..719997  PHAGE_Entero_phiP27: hypothetical protein P27p20; SF0687; phage(gi18249884)  1e-36  Click
32 720285..720665  PHAGE_Entero_2008: antitermination protein Q; SF0688; phage(gi209427762)  2e-62  Click
33 720865..720941  tRNA  N/A  Click
34 720943..721019  tRNA  N/A  Click
35 721022..721097  tRNA  N/A  Click
36 721101..721175  tRNA  N/A  Click
37 721468..721683  PHAGE_Escher_P13374: lysis protein, holin; SF0689; phage(gi410491645)  4e-27  Click
38 721687..722316  PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp05; SF0690; phage(gi116221997)  2e-32  Click
39 722646..722915  PHAGE_Entero_mEp460: endolysin; SF0691; phage(gi428782372)  2e-49  Click
40 722912..723316  PHAGE_Entero_HK620: endopeptidase; SF0692; phage(gi13559860)  2e-68  Click
41 723378..723680  PROPHAGE_Xantho_33913: ISxac3 transposase; SF0693; phage(gi21231087)  1e-09  Click
42 complement(723731..724165)  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SF0694; phage(gi157166067)  6e-70  Click
43 complement(724247..724600)  PROPHAGE_Escher_CFT073: transposase; SF0695; phage(gi26249430)  7e-37  Click
44 complement(724600..724926)  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SF0696; phage(gi157166066)  3e-54  Click
45 725011..725829  PROPHAGE_Escher_CFT073: transposase insF; SF0697; phage(gi26249410)  2e-158  Click
46 725857..726180  PHAGE_Entero_N15: gp1; terminase; phage small subunit; SF0698(gi9630465)  1e-18  Click
47 726152..726757  PHAGE_Gifsy_1: DNA packaging protein; large terminase subunit; Lambda gpA homolog; terminase; phage large subunit; SF0699(gi169257235)  9e-86  Click
48 726869..728062  PHAGE_Gifsy_1: DNA packaging protein; large terminase subunit; Lambda gpA homolog; terminase; phage large subunit; SF0700(gi169257235)  0.0  Click
49 728263..729318  PHAGE_Gifsy_1: bacteriophage portal protein; Lambda gpB homolog; SF0701; phage(gi169257233)  5e-157  Click
50 729233..729856  PHAGE_Gifsy_1: bacteriophage portal protein; Lambda gpB homolog; SF0702; phage(gi169257233)  4e-94  Click
51 729846..731351  PHAGE_Gifsy_1: bacteriophage prohead protease; Lambda gpC homolog; SF0703; phage(gi169257232)  8e-172  Click
52 731388..731735  PHAGE_Gifsy_1: bacteriophage head decoration protein; Lambda gpD homolog; SF0704; phage(gi169257231)  4e-42  Click
53 731793..732821  PHAGE_Gifsy_1: bacteriophage major capsid protein; Lambda gpE homolog; SF0705; phage(gi169257230)  8e-173  Click
54 732873..733259  PHAGE_Gifsy_1: bacteriophage accessory DNA packaging protein; Lambda FI homolog; SF0706; phage(gi169257229)  3e-13  Click
55 733271..733648  PHAGE_Gifsy_1: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; SF0707; phage(gi169257228)  2e-27  Click
56 733635..734219  PHAGE_Gifsy_1: bacteriophage head-tail assembly protein; Lambda gpZ homolog; SF0708; phage(gi169257227)  7e-78  Click
57 734216..734617  PHAGE_Gifsy_1: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; SF0709; phage(gi169257225)  1e-50  Click
58 734622..735368  PHAGE_Gifsy_1: bacteriophage major tail subunit; Lambda gpV homolog; SF0710; phage(gi169257224)  4e-106  Click
59 735409..735813  PHAGE_Gifsy_1: bacteriophage tail assembly chaperone; Lambda gpG homolog; SF0711; phage(gi169257223)  3e-34  Click
60 735822..736151  PHAGE_Gifsy_1: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; SF0712; phage(gi169257222)  1e-33  Click
61 736123..739164  PHAGE_Gifsy_1: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; SF0713; phage(gi169257221)  0.0  Click
62 739164..739493  PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpM homolog; SF0714; phage(gi169257220)  2e-45  Click
63 739493..740191  PHAGE_Entero_HK630: minor tail protein L; SF0715; phage(gi428782805)  3e-122  Click
64 740196..740939  PHAGE_Entero_mEp460: tail fiber component; SF0716; phage(gi428782332)  6e-145  Click
65 740903..741478  PHAGE_Entero_cdtI: putative tail component; SF0717; phage(gi148609399)  2e-85  Click
66 741539..745018  PHAGE_Entero_cdtI: putative tail tip assembly protein; SF0718; phage(gi148609400)  0.0  Click
67 745086..745685  PHAGE_Entero_4795: outer membrane protein Lom precursor; SF0719; phage(gi157166058)  3e-106  Click
68 745707..746810  PHAGE_Entero_phiP27: putative tail fiber protein; SF0720; phage(gi18249920)  2e-65  Click
69 747111..747734  PHAGE_Entero_phiP27: hypothetical protein P27p57; SF0721; phage(gi18249921)  2e-78  Click
70 complement(747914..749677)  PHAGE_Gifsy_1: leucine-rich repeat protein; SF0722; phage(gi169257209)  3e-10  Click
71 complement(750260..750736)  putative kinase inhibitor protein; SF0723  N/A  Click
72 complement(750795..752084)  PHAGE_Mycoba_Myrna: gp183; SF0725; phage(gi203454746)  4e-06  Click
Region 4, total : 28 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 898668..899342  PHAGE_Stx2_c_1717: truncated transposase; SF0858; phage(gi209447151)  1e-08  Click
2 899339..899686  PHAGE_Stx2_c_1717: transposase; SF0859; phage(gi209447152)  2e-43  Click
3 899706..901307  PHAGE_Stx2_c_1717: transposase; SF0860; phage(gi209447153)  5e-162  Click
4 901342..901608  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SF0861; phage(gi24111655)  2e-47  Click
5 complement(901847..902686)  PHAGE_Entero_Sf6: putative transposase OrfB; SF0862; phage(gi41057343)  8e-170  Click
6 complement(902713..903051)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SF0863; phage(gi24373865)  2e-09  Click
7 complement(903199..903489)  PHAGE_Entero_mEp237: hypothetical protein; SF0864; phage(gi435439317)  4e-24  Click
8 903787..904089  PROPHAGE_Xantho_33913: ISxac3 transposase; SF0865; phage(gi21231087)  1e-09  Click
9 904125..904943  PROPHAGE_Escher_CFT073: transposase insF; SF0866; phage(gi26249410)  7e-152  Click
10 complement(904983..905354)  PHAGE_Entero_mEp237: hypothetical protein; SF0867; phage(gi435439315)  9e-29  Click
11 complement(905393..905680)  hypothetical protein; SF0868  N/A  Click
12 complement(906313..906879)  hypothetical protein; SF0869  N/A  Click
13 907050..907427  hypothetical protein; SF0870  N/A  Click
14 complement(907561..907983)  putative bacteriophage protein; SF0871  N/A  Click
15 complement(908890..909522)  PHAGE_Escher_TL_2011b: hypothetical protein; SF0873; phage(gi418487646)  1e-45  Click
16 complement(909600..910022)  PHAGE_Entero_mEp237: CII protein; SF0874; phage(gi435439306)  4e-08  Click
17 complement(910006..910233)  PHAGE_Pectob_ZF40: putative cro anti-repressor; SF0875; phage(gi422936651)  1e-09  Click
18 910310..910717  PHAGE_Cronob_phiES15: putative transcriptional repressor DicA; SF0876; phage(gi401817574)  3e-32  Click
19 910920..911075  PHAGE_Salico_CGphi29: hypothetical protein; SF0877; phage(gi472340166)  6e-09  Click
20 complement(911522..912427)  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SF0878; phage(gi24111655)  6e-179  Click
21 complement(912385..912750)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SF0879; phage(gi17546153)  1e-45  Click
22 913190..914146  PHAGE_Entero_mEp460: regulatory protein Rha; SF0880; phage(gi428782357)  2e-55  Click
23 914660..914962  PROPHAGE_Xantho_33913: ISxac3 transposase; SF0881; phage(gi21231087)  1e-09  Click
24 914998..915816  PROPHAGE_Escher_CFT073: transposase insF; SF0882; phage(gi26249410)  5e-156  Click
25 complement(915841..916485)  PHAGE_Entero_mEp237: exonuclease; SF0883; phage(gi435439296)  2e-25  Click
26 complement(916829..917647)  PROPHAGE_Escher_CFT073: transposase insF; SF0884; phage(gi26249410)  2e-154  Click
27 complement(917683..917985)  PROPHAGE_Xantho_33913: ISxac3 transposase; SF0885; phage(gi21231087)  1e-09  Click
28 918051..918668  PHAGE_Entero_phiP27: hypothetical protein P27p57; SF0886; phage(gi18249921)  1e-82  Click
Region 5, total : 15 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1174910..1174921  attL    GGTGTAGTTAAT  N/A  Click
2 1174923..1175291  PHAGE_Salmon_vB_SosS_Oslo: integrase; SF1131; phage(gi399528791)  1e-14  Click
3 1175319..1176173  PHAGE_Salmon_vB_SosS_Oslo: integrase; SF1132; phage(gi399528791)  2e-37  Click
4 1176794..1177540  hypothetical protein; SF1133  N/A  Click
5 1178414..1178713  hypothetical protein; SF1134  N/A  Click
6 1178710..1180458  PHAGE_Entero_EFRM31: DNA primase; SF1135; phage(gi327198106)  1e-13  Click
7 1180825..1181025  hypothetical protein; SF1136  N/A  Click
8 1181640..1181864  hypothetical protein; SF1137  N/A  Click
9 1183362..1183934  PHAGE_Entero_EFRM31: prohead protease; SF1139; phage(gi327198114)  3e-28  Click
10 1183936..1185147  PHAGE_Salmon_ST64B: Portal Protein; SF1140; phage(gi23505449)  6e-42  Click
11 1185144..1185482  PHAGE_Entero_HK97: putative head-tail adaptor; SF1141; phage(gi9634168)  2e-26  Click
12 1185479..1185775  PHAGE_Entero_SfV: hypothetical protein SfVp06; SF1142; phage(gi19548996)  7e-08  Click
13 1186003..1186215  PHAGE_Xantho_Xop411: HNH endonuclease; SF1143; phage(gi157325492)  7e-05  Click
14 1186199..1186381  hypothetical protein; SF1144  N/A  Click
15 1186452..1186763  PHAGE_Salmon_ST64B: terminase small subunit; SF1145; phage(gi23505446)  8e-12  Click
16 1186930..1188408  PHAGE_Burkho_KS9: terminase gp2; SF1146; phage(gi255033734)  5e-83  Click
17 1189400..1189411  attR    GGTGTAGTTAAT  N/A  Click
Region 6, total : 28 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1387236..1388432  PROPHAGE_Escher_CFT073: transposase; SF1335; phage(gi26248352)  0.0  Click
2 complement(1388578..1388808)  hypothetical protein; SF1336  N/A  Click
3 complement(1388808..1389728)  hypothetical protein; SF1337  N/A  Click
4 complement(1390345..1391163)  PROPHAGE_Escher_CFT073: transposase insF; SF1339; phage(gi26249410)  7e-157  Click
5 complement(1391199..1391501)  PROPHAGE_Xantho_33913: ISxac3 transposase; SF1340; phage(gi21231087)  1e-09  Click
6 complement(1392029..1392934)  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SF1342; phage(gi24111655)  4e-179  Click
7 complement(1392892..1393257)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SF1343; phage(gi17546153)  1e-45  Click
8 1394096..1394842  PHAGE_Gifsy_2: bacteriophage DNA replication protein; SF1344; phage(gi169257280)  3e-79  Click
9 1394857..1395279  putative bacteriophage protein; SF1345  N/A  Click
10 1395280..1395693  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip073; SF1346; phage(gi20065868)  2e-08  Click
11 1395786..1396004  PHAGE_Stx2_c_I: hypothetical protein Stx2Ip090; SF1347; phage(gi20065885)  5e-32  Click
12 1396006..1396371  PHAGE_Entero_HK225: HNH endonuclease; SF1348; phage(gi428782431)  9e-35  Click
13 1396368..1397033  hypothetical protein; SF1349  N/A  Click
14 1397033..1397398  PHAGE_Stx2_c_86: hypothetical protein Stx2-86_gp44; SF1350; phage(gi116222036)  3e-31  Click
15 complement(1398514..1398909)  PROPHAGE_Escher_MG1655: IS1 transposase B; SF1351; phage(gi16131317)  9e-66  Click
16 complement(1398936..1399211)  PHAGE_Entero_P1: InsA; SF1352; phage(gi46401643)  1e-46  Click
17 1399345..1399944  PHAGE_Entero_mEp237: hypothetical protein; SF1353; phage(gi435439315)  8e-55  Click
18 1399944..1400234  PHAGE_Erwini_phiEt88: hypothetical protein; SF1354; phage(gi327198620)  2e-33  Click
19 1400231..1400785  putative bacteriophage protein; SF1355  N/A  Click
20 1401173..1401475  PROPHAGE_Xantho_33913: ISxac3 transposase; SF1356; phage(gi21231087)  1e-09  Click
21 1401511..1402329  PROPHAGE_Escher_CFT073: transposase insF; SF1357; phage(gi26249410)  1e-156  Click
22 1402357..1402725  PROPHAGE_Escher_Sakai: tail fiber; SF1358; phage(gi15834243)  3e-14  Click
23 1402922..1403293  PHAGE_Entero_phiP27: putative tail fiber assembly protein; SF1359; phage(gi18249919)  1e-54  Click
24 1403317..1404585  PHAGE_Entero_phiP27: putative tail fiber protein; SF1360; phage(gi18249920)  4e-93  Click
25 1404596..1405159  PHAGE_Entero_phiP27: hypothetical protein P27p57; SF1361; phage(gi18249921)  6e-83  Click
26 complement(1405360..1406217)  Iron transport protein, inner membrane component; SF1362  N/A  Click
27 complement(1406214..1407071)  Iron transport protein; SF1363  N/A  Click
28 complement(1407068..1407895)  PHAGE_Plankt_PaV_LD: ABC transporter; SF1364; phage(gi371496158)  5e-13  Click
Region 7, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1409936..1410211  PHAGE_Entero_P1: InsA; SF1366; phage(gi46401643)  3e-47  Click
2 1410238..1410633  PROPHAGE_Escher_MG1655: IS1 transposase B; SF1367; phage(gi16131317)  9e-66  Click
3 complement(1410822..1410989)  hypothetical protein; SF1369  N/A  Click
4 complement(1411037..1411705)  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; SF1370; phage(gi157166067)  2e-123  Click
5 complement(1411970..1412296)  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SF1371; phage(gi157166066)  3e-57  Click
6 complement(1412371..1413414)  PHAGE_Cronob_phiES15: hypothetical protein; SF1372; phage(gi401817570)  2e-173  Click
7 complement(1413474..1413794)  PHAGE_Entero_4795: putative host-nuclease inhibitor protein Gam; SF1373; phage(gi157165999)  5e-43  Click
8 1414510..1414989  PROPHAGE_Escher_CFT073: transposase insF; SF1374; phage(gi26249410)  1e-87  Click
9 complement(1415037..1416461)  PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; SF1375; phage(gi169257272)  2e-40  Click
10 complement(1416561..1416836)  hypothetical protein; SF1376  N/A  Click
11 complement(1417081..1417302)  PHAGE_Escher_P13374: host killing protein; SF1377; phage(gi410491620)  7e-06  Click
12 complement(1417379..1418284)  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SF1378; phage(gi24114950)  6e-179  Click
13 complement(1418242..1418652)  PROPHAGE_Escher_CFT073: transposase insC; SF1379; phage(gi26249447)  2e-51  Click
14 complement(1418905..1419537)  PHAGE_Entero_mEp460: regulatory protein Rha; SF1380; phage(gi428782357)  3e-58  Click
15 1420761..1421372  PHAGE_Entero_4795: hypothetical protein PBV4795_ORF79; SF1381; phage(gi157166064)  9e-07  Click
16 1421321..1421884  PHAGE_Entero_phiP27: hypothetical protein P27p57; SF1382; phage(gi18249921)  7e-80  Click
17 complement(1422064..1423779)  PHAGE_Ostreo_OlV1: hypothetical protein; SF1383; phage(gi313843974)  7e-08  Click
18 1424372..1424596  PHAGE_Entero_P1: InsA; SF1384; phage(gi46401643)  2e-37  Click
19 1424623..1425018  PROPHAGE_Escher_MG1655: IS1 transposase B; SF1385; phage(gi16131317)  3e-68  Click
20 1426147..1426965  PROPHAGE_Escher_CFT073: transposase insF; SF1387; phage(gi26249410)  7e-157  Click
Region 8, total : 33 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1915150..1916346  PROPHAGE_Escher_CFT073: transposase; SF1878; phage(gi26248352)  0.0  Click
2 1917075..1917323  PHAGE_Entero_mEp460: DinI-like protein; SF1879; phage(gi428782337)  4e-41  Click
3 1917923..1919674  PHAGE_Gifsy_1: leucine-rich repeat protein; SF1880; phage(gi169257209)  2e-10  Click
4 complement(1919854..1920477)  PHAGE_Entero_phiP27: hypothetical protein P27p57; SF1881; phage(gi18249921)  2e-78  Click
5 complement(1920778..1921839)  PHAGE_Entero_phiP27: putative tail fiber protein; SF1882; phage(gi18249920)  2e-65  Click
6 complement(1921903..1922502)  PHAGE_Entero_mEp460: Lom protein; SF1883; phage(gi428782335)  9e-105  Click
7 complement(1922570..1926049)  PHAGE_Entero_mEp460: host specificity protein; SF1884; phage(gi428782334)  0.0  Click
8 complement(1926110..1926652)  PHAGE_Entero_mEp460: tail assembly protein; SF1885; phage(gi428782333)  1e-79  Click
9 complement(1926649..1927248)  PHAGE_Entero_mEp460: tail fiber component; SF1886; phage(gi428782332)  6e-120  Click
10 complement(1927397..1928095)  PHAGE_Entero_mEp460: minor tail protein; SF1887; phage(gi428782331)  1e-120  Click
11 complement(1928095..1928424)  PHAGE_Entero_mEp460: minor tail protein; SF1888; phage(gi428782330)  3e-58  Click
12 complement(1928424..1931465)  PHAGE_Entero_mEp460: tail length tape measure protein; SF1889; phage(gi428782329)  0.0  Click
13 complement(1931437..1931712)  PHAGE_Entero_mEp460: tail assembly protein; SF1890; phage(gi428782328)  1e-47  Click
14 complement(1931775..1932161)  PHAGE_Entero_mEp460: minor tail protein; SF1891; phage(gi428782327)  4e-63  Click
15 complement(1932220..1932960)  PHAGE_Entero_mEp460: major tail protein; SF1892; phage(gi428782326)  3e-133  Click
16 complement(1932971..1933372)  PHAGE_Entero_mEp460: minor tail protein; SF1893; phage(gi428782325)  8e-73  Click
17 complement(1933369..1933959)  PHAGE_Entero_mEp460: minor tail protein; SF1894; phage(gi428782324)  9e-81  Click
18 complement(1933946..1934317)  PHAGE_Entero_HK630: head-tail connector Fii; SF1895; phage(gi428782797)  3e-28  Click
19 complement(1934329..1934730)  PHAGE_Entero_HK225: head assembly protein Fi; SF1896; phage(gi428782384)  2e-15  Click
20 1934994..1936190  PROPHAGE_Escher_CFT073: transposase; SF1897; phage(gi26248352)  0.0  Click
21 complement(1936890..1936964)  tRNA  N/A  Click
22 complement(1936968..1937043)  tRNA  N/A  Click
23 complement(1937046..1937122)  tRNA  N/A  Click
24 complement(1937124..1937199)  tRNA  N/A  Click
25 complement(1937376..1938065)  PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; SF1898; phage(gi169257244)  3e-78  Click
26 complement(1938062..1938421)  PHAGE_Escher_HK75: RusA-like protein; SF1899; phage(gi356870726)  2e-40  Click
27 1938625..1938927  PROPHAGE_Xantho_33913: ISxac3 transposase; SF1900; phage(gi21231087)  2e-09  Click
28 1938963..1939781  PROPHAGE_Escher_CFT073: transposase insF; SF1901; phage(gi26249410)  2e-158  Click
29 complement(1940294..1940671)  PROPHAGE_Escher_MG1655: IS1 transposase B; SF1902; phage(gi16131317)  2e-69  Click
30 complement(1940716..1940943)  PHAGE_Entero_P1: InsA; SF1903; phage(gi46401643)  1e-39  Click
31 1941077..1941904  PHAGE_Entero_phiP27: putative serine protease; SF1904; phage(gi18249869)  2e-149  Click
32 1941948..1942697  PHAGE_Entero_phiP27: hypothetical protein P27p14; SF1905; phage(gi18249878)  2e-54  Click
33 1942694..1943263  PHAGE_Salmon_1: hypothetical protein STM0896.2n.Fels1; SF1906; phage(gi169257162)  6e-25  Click
34 complement(1943960..1944799)  PHAGE_Entero_Sf6: putative transposase OrfB; SF1907; phage(gi41057343)  8e-170  Click
35 complement(1944826..1945164)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SF1908; phage(gi24373865)  2e-09  Click
36 1945761..1946156  hypothetical protein; SF1910  N/A  Click
37 1946197..1946940  PHAGE_Synech_S_CRM01: methyltransferase domain-containing protein; SF1911; phage(gi333798309)  1e-24  Click
Region 9, total : 29 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2032767..2032778  attL    ATGCCTGCCAGT  N/A  Click
2 2041590..2041602  attL    ATGGCTTATGAAA  N/A  Click
3 2047253..2048461  PROPHAGE_Shewan_MR-1: ISSod3, transposase; SF2023; phage(gi24375070)  2e-124  Click
4 complement(2049694..2050071)  PHAGE_Entero_phiP27: hypothetical protein P27p57; SF2024; phage(gi18249921)  4e-51  Click
5 complement(2050214..2051248)  PROPHAGE_Escher_CFT073: transposase insF; SF2025; phage(gi26249410)  1e-155  Click
6 2051323..2051826  PROPHAGE_Escher_MG1655: IS1 transposase B; SF2026; phage(gi16131317)  6e-87  Click
7 complement(2051919..2052401)  hypothetical protein; SF2027  N/A  Click
8 complement(2052469..2054418)  PHAGE_Salmon_ST64B: tail protein; SF2028; phage(gi23505460)  0.0  Click
9 complement(2054503..2054838)  PHAGE_Salmon_ST64B: hypothetical protein sb15; SF2029; phage(gi23505501)  6e-36  Click
10 complement(2054838..2055194)  PHAGE_Salmon_ST64B: Tail tube protein; SF2030; phage(gi23505459)  2e-51  Click
11 complement(2055194..2056690)  PHAGE_Salmon_ST64B: Tail Sheath protein; SF2031; phage(gi23505458)  0.0  Click
12 complement(2056858..2057112)  PHAGE_Salmon_ST64B: hypothetical protein sb11; SF2032; phage(gi23505456)  2e-30  Click
13 complement(2057242..2058060)  PROPHAGE_Escher_CFT073: transposase insF; SF2033; phage(gi26249410)  6e-156  Click
14 complement(2058096..2058398)  PROPHAGE_Xantho_33913: ISxac3 transposase; SF2034; phage(gi21231087)  1e-09  Click
15 complement(2058450..2059277)  PHAGE_Stx2_c_1717: transposase; SF2035; phage(gi209447153)  1e-58  Click
16 complement(2059297..2059644)  PHAGE_Stx2_c_1717: transposase; SF2036; phage(gi209447152)  1e-42  Click
17 complement(2059641..2060315)  PHAGE_Stx2_c_1717: truncated transposase; SF2037; phage(gi209447151)  1e-08  Click
18 complement(2060414..2060629)  PHAGE_Escher_P13374: lysis protein, holin; SF2038; phage(gi410491645)  7e-27  Click
19 complement(2060922..2060996)  tRNA  N/A  Click
20 complement(2061000..2061075)  tRNA  N/A  Click
21 complement(2061078..2061154)  tRNA  N/A  Click
22 complement(2061156..2061231)  tRNA  N/A  Click
23 complement(2061430..2062113)  PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; SF2039; phage(gi169257244)  1e-81  Click
24 complement(2062110..2062475)  PHAGE_Escher_HK75: RusA-like protein; SF2040; phage(gi356870726)  2e-39  Click
25 complement(2062476..2063462)  PHAGE_Salmon_ST64B: hypothetical protein sb47; SF2041; phage(gi23505491)  8e-47  Click
26 complement(2063536..2063814)  PHAGE_Cronob_phiES15: hypothetical protein; SF2042; phage(gi401817580)  7e-11  Click
27 complement(2064789..2065124)  hypothetical protein; SF2043  N/A  Click
28 2065552..2066397  PHAGE_Salmon_ST64B: Integrase protein; SF2044; phage(gi23505472)  1e-97  Click
29 complement(2066450..2066539)  tRNA  N/A  Click
30 2066594..2067430  hypothetical protein; SF2045  N/A  Click
31 2067464..2067476  attR    ATGGCTTATGAAA  N/A  Click
32 2067531..2067606  tRNA  N/A  Click
33 2068281..2068652  PROPHAGE_Escher_CFT073: prophage P4 integrase; SF2046; phage(gi26248270)  2e-31  Click
34 2068721..2069029  PROPHAGE_Escher_CFT073: prophage P4 integrase; SF2047; phage(gi26248270)  1e-57  Click
35 complement(2069137..2069976)  PHAGE_Entero_Sf6: putative transposase OrfB; SF2048; phage(gi41057343)  8e-170  Click
36 complement(2070003..2070341)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; SF2049; phage(gi24373865)  2e-09  Click
37 2070932..2071234  PROPHAGE_Xantho_33913: ISxac3 transposase; SF2051; phage(gi21231087)  2e-09  Click
38 2071270..2072061  PROPHAGE_Escher_CFT073: transposase insF; SF2052; phage(gi26249410)  2e-148  Click
39 2079334..2079345  attR    ATGCCTGCCAGT  N/A  Click
Region 10, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2229979..2231187  PROPHAGE_Shewan_MR-1: ISSod3, transposase; SF2203; phage(gi24375070)  2e-124  Click
2 complement(2232420..2232797)  PHAGE_Entero_phiP27: hypothetical protein P27p57; SF2204; phage(gi18249921)  4e-51  Click
3 complement(2232974..2234263)  PHAGE_Entero_phiP27: putative tail fiber protein; SF2205; phage(gi18249920)  2e-92  Click
4 complement(2234287..2234775)  PHAGE_Entero_phiP27: putative tail fiber assembly protein; SF2206; phage(gi18249919)  3e-65  Click
5 complement(2234835..2235248)  PHAGE_Salmon_ST64B: tail protein; SF2207; phage(gi23505468)  7e-17  Click
6 2235290..2235565  PHAGE_Entero_P1: InsA; SF2208; phage(gi46401643)  3e-47  Click
7 2235592..2235987  PROPHAGE_Escher_MG1655: IS1 transposase B; SF2209; phage(gi16131317)  8e-68  Click
8 2236686..2237012  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; SF2211; phage(gi157166066)  1e-55  Click
9 2237227..2237895  PROPHAGE_Escher_CFT073: transposase IS629; SF2212; phage(gi26250986)  6e-124  Click
10 complement(2238541..2239272)  putative transport system permease protein; SF2213  N/A  Click
11 complement(2239277..2240203)  PHAGE_Plankt_PaV_LD: ABC transporter; SF2214; phage(gi371496158)  1e-24  Click
Region 11, total : 13 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2684932..2685372)  PHAGE_Entero_2: DNA-invertase; SF2609; phage(gi169936026)  1e-73  Click
2 2685873..2687699  PHAGE_Acanth_mimivirus: putative leucine-rich repeat protein; SF2610; phage(gi311977765)  4e-09  Click
3 complement(2687879..2688502)  PHAGE_Entero_phiP27: hypothetical protein P27p57; SF2611; phage(gi18249921)  2e-78  Click
4 complement(2688803..2689669)  PHAGE_Entero_phiP27: putative tail fiber protein; SF2612; phage(gi18249920)  5e-77  Click
5 complement(2689741..2690229)  PHAGE_Entero_phiP27: putative tail fiber assembly protein; SF2613; phage(gi18249919)  3e-65  Click
6 complement(2690289..2690807)  PHAGE_Salmon_ST64B: tail protein; SF2614; phage(gi23505468)  8e-23  Click
7 2690871..2691236  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SF2615; phage(gi17546153)  1e-45  Click
8 2691194..2692099  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SF2616; phage(gi24114950)  6e-179  Click
9 complement(2691933..2693012)  PHAGE_Entero_phiP27: putative tail fiber protein; SF2617; phage(gi18249918)  9e-68  Click
10 complement(2692999..2693604)  PHAGE_Aeromo_vB_AsaM_56: hypothetical protein; SF2618; phage(gi422937564)  1e-32  Click
11 complement(2693606..2694073)  PHAGE_Acinet_AP22: putative baseplate J-like protein; SF2619; phage(gi388570818)  3e-10  Click
12 2694368..2694670  PROPHAGE_Xantho_33913: ISxac3 transposase; SF2620; phage(gi21231087)  1e-09  Click
13 2694811..2695524  PROPHAGE_Escher_CFT073: transposase insF; SF2621; phage(gi26249410)  4e-134  Click
Region 12, total : 9 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4115338..4116321  PHAGE_Strept_Sfi11: putative minor tail protein; SF3986; phage(gi9635024)  3e-06  Click
2 complement(4116351..4117256)  PROPHAGE_Shigel_301: insertion element IS2 transposase InsD; SF3987; phage(gi24114950)  6e-179  Click
3 complement(4117214..4117579)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFA protein; SF3988; phage(gi17546153)  1e-45  Click
4 4117806..4118480  hypothetical protein; SF3989  N/A  Click
5 complement(4118586..4119959)  PHAGE_Feldma_virus: putative hybrid sensor histdine kinase; SF3990; phage(gi197322490)  1e-08  Click
6 complement(4119956..4120654)  PHAGE_Feldma_virus: putative sensor histidine kinase; SF3991; phage(gi197322366)  4e-09  Click
7 4120804..4121304  periplasmic repressor CpxP; SF3992  N/A  Click
8 4121452..4122354  ferrous iron efflux protein F; SF3993  N/A  Click
9 4122553..4123497  PHAGE_Ostreo_OlV5: 6-phosphofructokinase; SF3994; phage(gi472341206)  1e-14  Click