| Definition | Yersinia pestis KIM 10 chromosome, complete genome. |
|---|---|
| Accession | NC_004088 |
| Length | 4,600,755 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 15 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(231438..232163) | PHAGE_Strept_phiC31: gp26; y0216; phage(gi40807292) | 4e-05 | Click |
| 2 | complement(232190..233554) | PHAGE_Burkho_phi1026b: gp59; y0217; phage(gi38707949) | 1e-21 | Click |
| 3 | complement(233708..234145) | decarboxylase; y0218 | N/A | Click |
| 4 | complement(234281..235171) | PHAGE_Synech_S_SM1: 6-phosphogluconate dehydrogenase; y0219; phage(gi326782617) | 5e-11 | Click |
| 5 | complement(235236..236063) | hypothetical protein; y0220 | N/A | Click |
| 6 | 236518..236991 | PHAGE_Escher_TL_2011b: putative outer membrane lipoprotein; y0221; phage(gi418487638) | 1e-08 | Click |
| 7 | complement(237082..237279) | hypothetical protein; y0222 | N/A | Click |
| 8 | 237428..237736 | PHAGE_Lactoc_bIL312: Csp; y0223; phage(gi13095918) | 3e-17 | Click |
| 9 | 237921..238208 | PHAGE_Lactoc_bIL312: Csp; y0224; phage(gi13095918) | 4e-17 | Click |
| 10 | complement(238391..238900) | PHAGE_Hypert_2: IS element Dka2 orfA; y0225; phage(gi300116744) | 5e-15 | Click |
| 11 | 238849..239211 | hypothetical protein; y0226 | N/A | Click |
| 12 | 239254..240429 | PHAGE_Clostr_phiCD38_2: tail tape measure; y0227; phage(gi333798123) | 7e-05 | Click |
| 13 | complement(240536..241882) | hypothetical protein; y0228 | N/A | Click |
| 14 | 242133..242987 | putative glutathione S-transferase YghU; y0229 | N/A | Click |
| 15 | complement(243177..243782) | PHAGE_Acinet_Ac42: hypothetical protein; y0230; phage(gi311992578) | 7e-19 | Click |
Region 2, total : 45 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2413020..2414219 | PHAGE_Africa_virus: NifS-like protein; y2182; phage(gi9628230) | 4e-08 | Click |
| 2 | 2414223..2415395 | hypothetical protein; y2183 | N/A | Click |
| 3 | 2415700..2416908 | PROPHAGE_Escher_CFT073: transposase; y2184; phage(gi26246249) | 0.0 | Click |
| 4 | complement(2417129..2417548) | PHAGE_Bacter_2: tail fiber; y2185; phage(gi212499733) | 2e-10 | Click |
| 5 | complement(2417559..2418476) | PHAGE_Salmon_SSU5: putative phage tail fiber protein; y2186; phage(gi410491431) | 2e-09 | Click |
| 6 | complement(2418493..2419506) | PHAGE_Cronob_phiES15: hypothetical protein; y2187; phage(gi401817612) | 7e-25 | Click |
| 7 | 2418846..2418857 | attL TTGGCGGCTCAG | N/A | Click |
| 8 | complement(2419491..2422694) | PHAGE_Cronob_phiES15: putative host specificity protein; y2188; phage(gi401817611) | 0.0 | Click |
| 9 | complement(2423266..2423886) | PHAGE_Entero_mEpX2: tail assembly protein; y2189; phage(gi428765633) | 9e-66 | Click |
| 10 | complement(2424300..2424851) | PHAGE_Cronob_phiES15: hypothetical protein; y2190; phage(gi401817606) | 5e-08 | Click |
| 11 | complement(2424950..2426044) | PHAGE_Haemop_Aaphi23: putative antirepressor protein Ant; y2191; phage(gi31544021) | 4e-37 | Click |
| 12 | 2426322..2426753 | PHAGE_Escher_TL_2011b: hypothetical protein; y2192; phage(gi418487671) | 2e-32 | Click |
| 13 | complement(2426832..2427464) | hypothetical protein; y2193 | N/A | Click |
| 14 | complement(2427725..2428435) | PHAGE_Entero_HK140: minor tail protein K; y2194; phage(gi428781957) | 8e-109 | Click |
| 15 | complement(2428438..2429190) | PHAGE_Entero_HK225: minor tail protein; y2195; phage(gi428782393) | 3e-101 | Click |
| 16 | complement(2429364..2429705) | PHAGE_Cronob_phiES15: putative minor tail protein; y2196; phage(gi401817607) | 2e-31 | Click |
| 17 | complement(2429708..2433211) | PHAGE_Entero_mEp213: tail length tape measure protein; y2197; phage(gi428782602) | 5e-152 | Click |
| 18 | complement(2433520..2433831) | PHAGE_Cronob_phiES15: hypothetical protein; y2198; phage(gi401817603) | 9e-32 | Click |
| 19 | complement(2433844..2434764) | PHAGE_Cronob_phiES15: putative major tail protein; y2199; phage(gi401817602) | 3e-75 | Click |
| 20 | complement(2434830..2435237) | PHAGE_Cronob_phiES15: hypothetical protein; y2200; phage(gi401817601) | 1e-16 | Click |
| 21 | complement(2435234..2435818) | PHAGE_Shigel_EP23: putative tail protein; y2201; phage(gi371496282) | 2e-27 | Click |
| 22 | complement(2435820..2436170) | PHAGE_Cronob_phiES15: putative structural protein 2; y2202; phage(gi401817599) | 5e-33 | Click |
| 23 | complement(2436172..2436426) | PHAGE_Salmon_SSU5: hypothetical protein; y2203; phage(gi410491538) | 8e-20 | Click |
| 24 | complement(2436423..2436980) | PHAGE_Cronob_phiES15: hypothetical protein; y2204; phage(gi401817598) | 3e-23 | Click |
| 25 | complement(2436953..2438158) | PHAGE_Acinet_Bphi_B1251: major capsid protein; y2205; phage(gi423262007) | 1e-113 | Click |
| 26 | complement(2438172..2438945) | PHAGE_Xantho_Xp15: putative phage structural protein; y2206; phage(gi66392059) | 1e-19 | Click |
| 27 | complement(2439067..2440179) | PHAGE_Cronob_phiES15: hypothetical protein; y2207; phage(gi401817594) | 3e-123 | Click |
| 28 | complement(2440180..2440821) | PHAGE_Burkho_KL1: portal protein; y2208; phage(gi399528722) | 1e-34 | Click |
| 29 | complement(2440840..2441568) | PHAGE_Burkho_KL1: portal protein; y2209; phage(gi399528722) | 2e-35 | Click |
| 30 | complement(2442547..2443755) | PROPHAGE_Escher_CFT073: transposase; y2210; phage(gi26246249) | 0.0 | Click |
| 31 | complement(2444391..2444840) | PHAGE_Salmon_vB_SosS_Oslo: hypothetical protein; y2212; phage(gi399528759) | 4e-51 | Click |
| 32 | complement(2444871..2445506) | PHAGE_Pectob_ZF40: putative transposase; y2213; phage(gi422936679) | 3e-87 | Click |
| 33 | complement(2445963..2446760) | PHAGE_Cronob_ENT47670: phage antirepressor protein; y2214; phage(gi431810509) | 8e-50 | Click |
| 34 | complement(2447222..2447680) | PHAGE_Entero_cdtI: lysin; y2215; phage(gi148609441) | 2e-24 | Click |
| 35 | complement(2447665..2447820) | PHAGE_Cronob_phiES15: putative endolysin; y2216; phage(gi401817587) | 2e-11 | Click |
| 36 | complement(2448923..2449132) | hypothetical protein; y2217 | N/A | Click |
| 37 | complement(2449556..2450119) | PHAGE_Salmon_SPN3UB: hypothetical protein; y2218; phage(gi423262398) | 1e-29 | Click |
| 38 | complement(2450268..2450393) | hypothetical protein; y2219 | N/A | Click |
| 39 | complement(2450390..2450779) | PHAGE_Entero_2008: antitermination protein Q; y2220; phage(gi209427762) | 2e-44 | Click |
| 40 | 2450765..2451013 | hypothetical protein; y2221 | N/A | Click |
| 41 | complement(2450780..2451385) | PHAGE_Salmon_ST160: NinG; y2222; phage(gi318065938) | 4e-43 | Click |
| 42 | complement(2451459..2451905) | PHAGE_Cronob_ENT47670: putative ninB protein; y2223; phage(gi431810524) | 5e-47 | Click |
| 43 | 2451986..2452630 | PHAGE_Pseudo_F116: DNA adenine methyltransferase; y2224; phage(gi56692911) | 4e-43 | Click |
| 44 | complement(2453358..2454140) | PROPHAGE_Escher_CFT073: transposase/IS protein; y2225; phage(gi26248359) | 3e-143 | Click |
| 45 | complement(2454137..2455159) | PROPHAGE_Escher_CFT073: transposase; y2226; phage(gi26248360) | 0.0 | Click |
| 46 | 2455024..2455035 | attR TTGGCGGCTCAG | N/A | Click |
| 47 | 2455229..2456467 | PHAGE_Salmon_1: putative bacteriophage integrase; y2227; phage(gi169257156) | 1e-125 | Click |
Region 3, total : 16 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2691227..2691565) | PROPHAGE_Escher_CFT073: transposase; y2424; phage(gi26246249) | 2e-56 | Click |
| 2 | complement(2691565..2692341) | PROPHAGE_Escher_CFT073: transposase; y2425; phage(gi26246249) | 3e-139 | Click |
| 3 | complement(2692473..2693549) | hypothetical protein; y2426 | N/A | Click |
| 4 | complement(2693615..2693905) | PHAGE_Burkho_phiE202: gp7, pANL12; y2427; phage(gi134288781) | 3e-07 | Click |
| 5 | complement(2693886..2694158) | PHAGE_Burkho_phiE202: gp6, pANL56; y2428; phage(gi134288760) | 2e-12 | Click |
| 6 | 2694189..2694548 | PHAGE_Entero_PsP3: gp15; y2429; phage(gi41057367) | 9e-19 | Click |
| 7 | complement(2694215..2694610) | PHAGE_Erwini_ENT90: hypothetical protein; y2430; phage(gi431810949) | 6e-15 | Click |
| 8 | 2694569..2694844 | PHAGE_Entero_PsP3: gp16; y2431; phage(gi41057368) | 3e-23 | Click |
| 9 | 2694861..2695148 | PHAGE_Aeromo_vB_AsaM_56: putative tail-fiber protein; y2432; phage(gi422937565) | 7e-06 | Click |
| 10 | 2695795..2696100 | hypothetical protein; y2433 | N/A | Click |
| 11 | 2696524..2696664 | PHAGE_Entero_PsP3: gp21; y2434; phage(gi41057373) | 1e-13 | Click |
| 12 | 2696748..2697194 | hypothetical protein; y2435 | N/A | Click |
| 13 | 2697266..2698225 | PHAGE_Lactob_phiAT3: putative transposase B; y2436; phage(gi48697274) | 6e-15 | Click |
| 14 | 2698815..2699012 | hypothetical protein; y2437 | N/A | Click |
| 15 | complement(2700135..2700260) | hypothetical protein; y2438 | N/A | Click |
| 16 | complement(2700349..2700576) | PHAGE_Salmon_SPN9CC: replicative DNA helicase; y2439; phage(gi389060513) | 2e-14 | Click |
Region 4, total : 14 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(3236486..3237226) | PHAGE_Acanth_moumouvirus: putative glucosamine-fructose-6-phosphate aminotransferase; y2933; phage(gi441432573) | 3e-05 | Click |
| 2 | complement(3237524..3238303) | PHAGE_Entero_HK97: tail fiber; y2934; phage(gi9634179) | 8e-54 | Click |
| 3 | complement(3238400..3238774) | PHAGE_Entero_SfV: tail protein; y2935; phage(gi19548988) | 4e-11 | Click |
| 4 | complement(3238744..3239004) | PHAGE_Salmon_ST64B: putative tail protein; y2936; phage(gi23505467) | 5e-05 | Click |
| 5 | complement(3239001..3240137) | PHAGE_Entero_SfV: tail protein; y2937; phage(gi19549009) | 8e-33 | Click |
| 6 | complement(3240141..3240596) | PHAGE_Entero_SfV: tail protein; y2938; phage(gi19549008) | 5e-14 | Click |
| 7 | complement(3240593..3241189) | PHAGE_Entero_SfV: tail protein; y2939; phage(gi19549007) | 2e-17 | Click |
| 8 | complement(3241205..3242260) | PHAGE_Entero_SfV: tail protein; y2940; phage(gi19549006) | 3e-32 | Click |
| 9 | complement(3242257..3243663) | PHAGE_Entero_SfV: tail/DNA circulation protein; y2941; phage(gi19549005) | 3e-20 | Click |
| 10 | complement(3243930..3245423) | hypothetical protein; y2942 | N/A | Click |
| 11 | complement(3245544..3245843) | hypothetical protein; y2943 | N/A | Click |
| 12 | 3245797..3246201 | hypothetical protein; y2944 | N/A | Click |
| 13 | complement(3245845..3246213) | PHAGE_Entero_SfV: hypothetical protein SfVp12; y2945; phage(gi19549002) | 2e-10 | Click |
| 14 | complement(3246235..3247743) | PHAGE_Entero_SfV: tail sheath protein; y2946; phage(gi19549001) | 4e-107 | Click |
Region 5, total : 12 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3381641..3381654 | attL CACACAAACTGATT | N/A | Click |
| 2 | 3389410..3389919 | PROPHAGE_Salmon_Ty2: transposase; y3080; phage(gi29143766) | 6e-84 | Click |
| 3 | 3390110..3391342 | PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; y3081; phage(gi16130540) | 7e-131 | Click |
| 4 | 3391421..3392509 | hypothetical protein; y3082 | N/A | Click |
| 5 | 3392560..3394050 | PHAGE_Staphy_phiNM3: hypothetical protein; y3083; phage(gi118725072) | 7e-06 | Click |
| 6 | 3395114..3395404 | hypothetical protein; y3084 | N/A | Click |
| 7 | 3395417..3396313 | PROPHAGE_Salmon_LT2: integrase; y3085; phage(gi16766072) | 4e-91 | Click |
| 8 | 3396506..3397048 | PHAGE_Entero_phiP27: hypothetical protein P27p16; y3086; phage(gi18249880) | 7e-07 | Click |
| 9 | 3397011..3398000 | PHAGE_Entero_P4: DNA primase; y3087; phage(gi9627512) | 8e-47 | Click |
| 10 | 3397991..3399085 | PHAGE_Burkho_BcepGomr: BcepGomrgp62; y3088; phage(gi146329974) | 6e-28 | Click |
| 11 | complement(3399434..3399754) | PHAGE_Burkho_2: gp6, putative addiction module antidote protein; y3089; phage(gi134288715) | 5e-08 | Click |
| 12 | 3400676..3401698 | PROPHAGE_Escher_CFT073: transposase; y3090; phage(gi26248360) | 0.0 | Click |
| 13 | 3401695..3402477 | PROPHAGE_Escher_CFT073: transposase/IS protein; y3091; phage(gi26248359) | 3e-143 | Click |
| 14 | 3415033..3415046 | attR CACACAAACTGATT | N/A | Click |