Definition Staphylococcus aureus subsp. aureus MW2, complete genome.
Accession NC_003923
Length 2,820,462
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 19 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 836064..838436  PHAGE_Lactoc_Q54: putative ribonuclease; MW0742; phage(gi115304286)  2e-98  Click
2 838458..838922  SsrA-binding protein; MW0743  N/A  Click
3 839013..839371  tRNA  N/A  Click
4 839358..839372  attL    TCCCGCCGTCTCCAT  N/A  Click
5 complement(839478..839693)  hypothetical protein; MW0744  N/A  Click
6 complement(839705..840820)  PHAGE_Bacill_phIS3501: phage integrase; MW0745; phage(gi422934298)  5e-80  Click
7 complement(840826..841563)  PHAGE_Staphy_96: ORF061; MW0746; phage(gi66395939)  8e-08  Click
8 841715..841933  PHAGE_Staphy_SpaA1: transcriptional regulator, pbsX; MW0747; phage(gi399498897)  1e-07  Click
9 841945..842091  hypothetical protein; MW0748  N/A  Click
10 842084..842308  PHAGE_Staphy_PT1028: ORF021; MW0749; phage(gi66395185)  1e-08  Click
11 842309..842608  PHAGE_Staphy_PT1028: ORF016; MW0750; phage(gi66395180)  2e-34  Click
12 842700..845072  PHAGE_Lactoc_bIL310: helicase; MW0751; phage(gi13095886)  2e-99  Click
13 845745..846089  PHAGE_Staphy_PT1028: ORF013; MW0752; phage(gi66395177)  4e-08  Click
14 846314..846520  hypothetical protein; MW0753  N/A  Click
15 846507..847565  PHAGE_Staphy_2: phage capsid; MW0754; phage(gi156603997)  1e-15  Click
16 847747..848238  PHAGE_Staphy_PT1028: ORF010; MW0755; phage(gi66395174)  4e-27  Click
17 848599..849576  PHAGE_Amsact_: DNA-directed RNA polymerase beta chain; MW0756; phage(gi9964405)  2e-07  Click
18 849592..850152  hypothetical protein; MW0757  N/A  Click
19 complement(850452..851006)  PHAGE_Staphy_71: ORF024; MW0758; phage(gi66396064)  2e-69  Click
20 851795..852595  PHAGE_Strept_2: streptococcal superantigen SSA; MW0759; phage(gi28876204)  4e-86  Click
21 complement(852762..853484)  PHAGE_Staphy_phiNM3: enterotoxin type A precursor; MW0760; phage(gi118725111)  6e-30  Click
22 853794..853808  attR    TCCCGCCGTCTCCAT  N/A  Click
Region 2, total : 75 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1522193..1522204  attL    AAATTATTTCAA  N/A  Click
2 complement(1528947..1529132)  PHAGE_Staphy_phiPVL108: hypothetical protein SABPV108_gp59; MW1377; phage(gi119443711)  5e-28  Click
3 1529266..1529281  attL    GCCCTTTTTTTGCCCT  N/A  Click
4 complement(1529381..1530358)  PHAGE_Staphy_phi5967PVL: Panton-Valentine leukocidin chain S; MW1378; phage(gi431810286)  0.0  Click
5 complement(1530360..1531298)  PHAGE_Staphy_phi7401PVL: Panton-Valentine leukocidin chain S precursor; MW1379; phage(gi448244684)  0.0  Click
6 complement(1531688..1533142)  PHAGE_Staphy_phi7401PVL: amidase; MW1380; phage(gi448244683)  0.0  Click
7 complement(1533153..1533455)  PHAGE_Staphy_phi7401PVL: holin; MW1381; phage(gi448244682)  3e-52  Click
8 complement(1533591..1533890)  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1382; phage(gi448244681)  2e-52  Click
9 complement(1533936..1534100)  PHAGE_Staphy_2: hypothetical protein SPTP3102_gp63; MW1383; phage(gi156604012)  3e-26  Click
10 complement(1534093..1534482)  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1384; phage(gi448244680)  2e-67  Click
11 complement(1534482..1535948)  PHAGE_Staphy_2: hypothetical protein SPTP3102_gp61; MW1385; phage(gi156604010)  0.0  Click
12 complement(1535948..1537858)  PHAGE_Staphy_2: hypothetical protein SPTP3102_gp60; MW1386; phage(gi156604009)  0.0  Click
13 complement(1537874..1538164)  PHAGE_Staphy_phiSLT: hypothetical protein phiSLTp54; MW1387; phage(gi12719445)  7e-51  Click
14 complement(1538164..1539747)  PHAGE_Staphy_SMSAP5: prophage endopeptidase tail family protein; MW1388; phage(gi422935801)  0.0  Click
15 complement(1539756..1540580)  PHAGE_Staphy_2: phage tail tape measure protein like; MW1389; phage(gi156604006)  1e-160  Click
16 complement(1540580..1546780)  PHAGE_Staphy_SMSAP5: phage tail tape measure protein; MW1390; phage(gi422935797)  0.0  Click
17 complement(1547003..1547344)  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1391; phage(gi448244673)  3e-60  Click
18 complement(1547402..1547857)  PHAGE_Staphy_phi7401PVL: major tail protein2; MW1392; phage(gi448244672)  3e-82  Click
19 complement(1547949..1548590)  PHAGE_Staphy_phi7401PVL: major tail protein1; MW1393; phage(gi448244671)  1e-122  Click
20 complement(1548625..1549020)  PHAGE_Staphy_SMSAP5: hypothetical protein; MW1394; phage(gi422935824)  2e-70  Click
21 complement(1549021..1549422)  PHAGE_Staphy_SMSAP5: putative DNA-binding protein; MW1395; phage(gi422935822)  5e-71  Click
22 complement(1549419..1549751)  PHAGE_Staphy_SMSAP5: hypothetical protein; MW1396; phage(gi422935831)  1e-59  Click
23 complement(1549763..1550041)  PHAGE_Staphy_2: hypothetical protein SPTP3102_gp49; MW1397; phage(gi156603998)  2e-48  Click
24 complement(1550110..1551273)  PHAGE_Staphy_phi7401PVL: phage major capsid protein; MW1398; phage(gi448244667)  0.0  Click
25 complement(1551285..1552058)  PHAGE_Staphy_SMSAP5: protease; MW1399; phage(gi422935811)  2e-143  Click
26 complement(1552042..1553280)  PHAGE_Staphy_phi7401PVL: portal protein; MW1400; phage(gi448244665)  0.0  Click
27 complement(1553285..1554976)  PHAGE_Staphy_42E: ORF003; MW1401; phage(gi66395511)  0.0  Click
28 complement(1554966..1555271)  PHAGE_Staphy_phi7401PVL: terminase-small subunit; MW1402; phage(gi448244663)  1e-52  Click
29 complement(1555399..1555713)  PHAGE_Staphy_42E: ORF046; MW1403; phage(gi66395552)  9e-59  Click
30 complement(1555870..1556307)  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1404; phage(gi448244661)  1e-79  Click
31 complement(1556320..1557678)  PHAGE_Staphy_phi7401PVL: helicase; MW1405; phage(gi448244660)  0.0  Click
32 complement(1557668..1557865)  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1406; phage(gi448244659)  1e-33  Click
33 1558153..1558275  PHAGE_Staphy_47: ORF143; MW1407; phage(gi66395725)  2e-17  Click
34 complement(1558299..1560746)  PHAGE_Staphy_phi7401PVL: virulence-associated protein E; MW1408; phage(gi448244658)  0.0  Click
35 1560801..1561007  hypothetical protein; MW1409  N/A  Click
36 complement(1561034..1561234)  PHAGE_Staphy_phiSLT: hypothetical protein phiSLTp34; MW1410; phage(gi12719425)  2e-30  Click
37 complement(1561302..1561457)  PHAGE_Staphy_47: ORF090; MW1411; phage(gi66395717)  2e-22  Click
38 complement(1561457..1561657)  PHAGE_Staphy_CN125: hypothetical protein CUR030; MW1412; phage(gi239507391)  2e-31  Click
39 complement(1561632..1561820)  PHAGE_Staphy_phiNM: hypothetical protein SAPPV1_gp32; MW1413; phage(gi118430756)  1e-29  Click
40 complement(1561817..1562053)  PHAGE_Staphy_CN125: hypothetical protein CUR029; MW1414; phage(gi239507390)  2e-38  Click
41 complement(1562099..1562632)  PHAGE_Staphy_96: ORF023; MW1415; phage(gi66395908)  1e-97  Click
42 complement(1562647..1562808)  PHAGE_Staphy_96: ORF114; MW1416; phage(gi66395961)  5e-25  Click
43 complement(1562809..1563090)  PHAGE_Staphy_26: hypothetical protein SAP26_gp55; MW1417; phage(gi304443293)  4e-50  Click
44 complement(1563091..1563264)  PHAGE_Staphy_26: hypothetical protein SAP26_gp54; MW1418; phage(gi304443292)  1e-26  Click
45 complement(1563254..1563508)  PHAGE_Staphy_26: hypothetical protein SAP26_gp53; MW1419; phage(gi304443291)  5e-40  Click
46 complement(1563520..1563762)  PHAGE_Staphy_phiNM3: hypothetical protein; MW1420; phage(gi118725080)  4e-41  Click
47 complement(1563777..1563977)  PHAGE_Staphy_CN125: hypothetical protein CUR025; MW1421; phage(gi239507386)  3e-31  Click
48 complement(1563980..1564237)  PHAGE_Staphy_2: hypothetical protein SPTP3102_gp24; MW1422; phage(gi156603973)  3e-44  Click
49 complement(1564237..1564638)  PHAGE_Staphy_SMSAP5: putative DNA-binding protein; MW1423; phage(gi422935821)  7e-75  Click
50 complement(1564638..1564823)  PHAGE_Staphy_2: hypothetical protein SPTP3102_gp22; MW1424; phage(gi156603971)  3e-29  Click
51 complement(1564836..1566797)  PHAGE_Staphy_phi7401PVL: phage encoded DNA polymerase I; MW1425; phage(gi448244655)  0.0  Click
52 complement(1566856..1567413)  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1426; phage(gi448244654)  7e-101  Click
53 complement(1567439..1568605)  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1427; phage(gi448244653)  0.0  Click
54 complement(1568602..1568964)  PHAGE_Staphy_SMSAP5: hypothetical protein; MW1428; phage(gi422935829)  2e-61  Click
55 complement(1568979..1569302)  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1429; phage(gi448244651)  2e-52  Click
56 complement(1569381..1569542)  PHAGE_Staphy_PVL: hypothetical protein PVL_38; MW1430; phage(gi9635203)  8e-25  Click
57 complement(1569555..1569818)  PHAGE_Staphy_187: ORF040; MW1431; phage(gi66395252)  8e-41  Click
58 complement(1569843..1570058)  PHAGE_Staphy_IPLA35: hypothetical protein SauSIPLA35_gp10; MW1432; phage(gi215401118)  2e-30  Click
59 1570113..1570478  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1433; phage(gi448244650)  1e-65  Click
60 complement(1570447..1570692)  PHAGE_Staphy_2: hypothetical protein SPTP3102_gp12; MW1434; phage(gi156603961)  7e-43  Click
61 complement(1570708..1570956)  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1435; phage(gi448244649)  5e-40  Click
62 1571120..1571443  PHAGE_Staphy_phi7401PVL: phage repressor; MW1436; phage(gi448244648)  1e-55  Click
63 1571516..1571917  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1437; phage(gi448244647)  8e-71  Click
64 1571935..1572369  PHAGE_Staphy_phi7401PVL: putative lipoprotein; MW1438; phage(gi448244646)  1e-76  Click
65 1572398..1572793  PHAGE_Staphy_phi7401PVL: hypothetical protein; MW1439; phage(gi448244645)  4e-72  Click
66 1572901..1573005  hypothetical protein; MW1440  N/A  Click
67 complement(1572992..1573615)  PHAGE_Staphy_phi7401PVL: Na/K ATPase; MW1441; phage(gi448244644)  5e-10  Click
68 1573725..1574930  PHAGE_Staphy_phiPVL108: phage integrase; MW1442; phage(gi119443654)  0.0  Click
69 1574940..1574955  attR    GCCCTTTTTTTGCCCT  N/A  Click
70 complement(1574973..1576859)  PHAGE_Staphy_phi2958PVL: hypothetical protein phi2958PVL_gp01; MW1443; phage(gi209363553)  7e-115  Click
71 complement(1577011..1577919)  hypothetical protein; MW1444  N/A  Click
72 complement(1578164..1579930)  PHAGE_Feldma_virus: putative hybrid sensor histdine kinase; MW1445; phage(gi197322490)  3e-16  Click
73 complement(1579896..1580621)  PHAGE_Feldma_virus: putative sensor histidine kinase; MW1446; phage(gi197322366)  5e-07  Click
74 complement(1580754..1581491)  ribosomal large subunit pseudouridine synthase B; MW1447  N/A  Click
75 complement(1581484..1582026)  hypothetical protein; MW1448  N/A  Click
76 complement(1582019..1582774)  hypothetical protein; MW1449  N/A  Click
77 1582842..1583348  hypothetical protein; MW1450  N/A  Click
78 complement(1583426..1584313)  PHAGE_Thermu_45: XerD-like integrase; MW1451; phage(gi157265299)  5e-22  Click
79 1584849..1584860  attR    AAATTATTTCAA  N/A  Click
Region 3, total : 63 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2036088..2036100  attL    TTCATTTAAATAA  N/A  Click
2 complement(2043902..2045647)  PHAGE_Ostreo_1: hypothetical protein H665_p115; MW1880; phage(gi260665984)  2e-06  Click
3 2046033..2046233  truncated beta-hemolysin; MW1881  N/A  Click
4 2046605..2046784  PHAGE_Staphy_phiN315: hypothetical protein SAS058; MW1882; phage(gi30043926)  6e-28  Click
5 2046808..2047116  PHAGE_Staphy_phiN315: hypothetical protein SA1753; MW1883; phage(gi30043927)  3e-49  Click
6 complement(2047408..2047758)  PHAGE_Staphy_phiNM3: Staphylococcal complement inhibitor; MW1884; phage(gi118725117)  7e-59  Click
7 complement(2049256..2049747)  PHAGE_Staphy_phi13: staphylokinase; MW1885; phage(gi29028715)  4e-89  Click
8 complement(2049938..2050693)  PHAGE_Staphy_3: amidase; MW1886; phage(gi156604072)  7e-154  Click
9 complement(2050705..2050959)  PHAGE_Staphy_3: holin; MW1887; phage(gi156604071)  3e-43  Click
10 complement(2051171..2051305)  PHAGE_Staphy_phiN315: hypothetical protein SAS059; MW1888; phage(gi30043935)  2e-16  Click
11 complement(2051456..2052229)  PHAGE_Staphy_phiNM3: enterotoxin type A precursor; MW1889; phage(gi118725111)  3e-146  Click
12 complement(2052602..2052976)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp54; MW1890; phage(gi156603943)  6e-65  Click
13 complement(2053032..2053361)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp53; MW1891; phage(gi156603942)  6e-38  Click
14 complement(2053365..2053517)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp52; MW1892; phage(gi156603941)  2e-16  Click
15 complement(2053510..2057292)  PHAGE_Staphy_phiN315: hypothetical protein SA1764; MW1893; phage(gi30043941)  0.0  Click
16 complement(2057308..2058798)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp48; MW1894; phage(gi156603937)  0.0  Click
17 complement(2058798..2063447)  PHAGE_Staphy_1: tail length tape measure protein; MW1895; phage(gi156603936)  0.0  Click
18 complement(2063503..2063586)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp46; MW1896; phage(gi156603935)  5e-09  Click
19 complement(2063685..2064131)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp45; MW1897; phage(gi156603934)  4e-80  Click
20 complement(2064196..2065149)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp44; MW1898; phage(gi156603933)  1e-180  Click
21 complement(2065150..2065530)  PHAGE_Staphy_CN125: hypothetical protein CUR045; MW1899; phage(gi239507406)  1e-70  Click
22 complement(2065527..2065904)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp42; MW1900; phage(gi156603931)  4e-66  Click
23 complement(2065904..2066239)  PHAGE_Staphy_1: putative phage head tail adapter; MW1901; phage(gi156603930)  8e-62  Click
24 complement(2066226..2066558)  PHAGE_Staphy_phiPV83: hypothetical protein phiPV83p46; MW1902; phage(gi9635721)  5e-60  Click
25 complement(2066567..2066725)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp39; MW1903; phage(gi156603928)  2e-23  Click
26 complement(2066761..2068008)  PHAGE_Staphy_1: capsid protein; MW1904; phage(gi156603927)  0.0  Click
27 complement(2068096..2068680)  PHAGE_Staphy_1: putative prohead protease; MW1905; phage(gi156603926)  4e-109  Click
28 complement(2068673..2069923)  PHAGE_Staphy_1: portal protein; MW1906; phage(gi156603925)  0.0  Click
29 complement(2069929..2070129)  PHAGE_Staphy_1: putative terminase large subunit; MW1907; phage(gi156603924)  3e-30  Click
30 complement(2070143..2071837)  PHAGE_Staphy_1: putative terminase large subunit; MW1908; phage(gi156603923)  0.0  Click
31 complement(2071840..2072307)  PHAGE_Staphy_1: putative terminase small subunit; MW1909; phage(gi156603922)  8e-85  Click
32 complement(2072436..2072789)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp32; MW1910; phage(gi156603921)  6e-68  Click
33 complement(2072796..2073248)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp31; MW1911; phage(gi156603920)  2e-82  Click
34 complement(2073363..2073833)  PHAGE_Staphy_CN125: hypothetical protein CUR033; MW1912; phage(gi239507394)  4e-80  Click
35 complement(2073856..2074059)  PHAGE_Staphy_77: 77ORF071; MW1913; phage(gi41189570)  1e-31  Click
36 complement(2074056..2074706)  PHAGE_Staphy_phi5967PVL: hypothetical protein; MW1914; phage(gi431810265)  1e-121  Click
37 complement(2074713..2074865)  PHAGE_Staphy_PVL: hypothetical protein PVL_57; MW1915; phage(gi9635222)  2e-21  Click
38 complement(2074865..2075014)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp28; MW1916; phage(gi156603917)  2e-20  Click
39 complement(2075028..2075342)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp21; MW1917; phage(gi156603910)  3e-42  Click
40 complement(2075355..2075759)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp20; MW1918; phage(gi156603909)  6e-63  Click
41 complement(2075768..2075986)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp19; MW1919; phage(gi156603908)  2e-37  Click
42 complement(2075993..2076886)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp18; MW1920; phage(gi156603907)  2e-169  Click
43 complement(2076916..2077386)  PHAGE_Staphy_1: ss-DNA-binding protein; MW1921; phage(gi156603906)  7e-81  Click
44 complement(2077387..2077872)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp16; MW1922; phage(gi156603905)  2e-87  Click
45 complement(2078085..2079005)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp15; MW1923; phage(gi156603904)  3e-175  Click
46 complement(2079007..2080956)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp14; MW1924; phage(gi156603903)  0.0  Click
47 complement(2080959..2081222)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp13; MW1925; phage(gi156603902)  4e-46  Click
48 complement(2081231..2081491)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp12; MW1926; phage(gi156603901)  2e-45  Click
49 complement(2081584..2081745)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp11; MW1927; phage(gi156603900)  6e-25  Click
50 complement(2081742..2082062)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp10; MW1928; phage(gi156603899)  3e-59  Click
51 2082118..2082753  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp09; MW1929; phage(gi156603898)  3e-117  Click
52 complement(2082768..2082908)  PHAGE_Staphy_phiPV83: hypothetical protein phiPV83p08; MW1930; phage(gi9635685)  1e-18  Click
53 complement(2082939..2083136)  PHAGE_Staphy_phiNM3: hypothetical protein; MW1931; phage(gi118725064)  7e-34  Click
54 complement(2083152..2083901)  PHAGE_Staphy_phi13: anti-repressor; MW1932; phage(gi29028674)  1e-138  Click
55 2083958..2084497  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp06; MW1933; phage(gi156603895)  2e-101  Click
56 complement(2084521..2084781)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp05; MW1934; phage(gi156603894)  5e-43  Click
57 complement(2084799..2085023)  PHAGE_Staphy_1: hypothetical protein SPTP3101_gp04; MW1935; phage(gi156603893)  5e-38  Click
58 2085182..2085952  PHAGE_Staphy_1: repressor; MW1936; phage(gi156603892)  3e-143  Click
59 2086148..2086876  PHAGE_Staphy_phiNM3: enterotoxin type A precursor; MW1937; phage(gi118725111)  6e-32  Click
60 2086900..2087628  PHAGE_Staphy_phiN315: enterotoxin P; MW1938; phage(gi30043936)  4e-28  Click
61 2087471..2087483  attR    TTCATTTAAATAA  N/A  Click
62 2087712..2088749  PHAGE_Staphy_phiN315: integrase; MW1939; phage(gi30043990)  0.0  Click
63 2088806..2089630  truncated beta-hemplysin; MW1940  N/A  Click
64 complement(2089868..2090884)  PHAGE_Staphy_1: Panton-Valentine leukocidin chainF precursor; MW1941; phage(gi156603948)  2e-57  Click
65 complement(2090906..2091958)  PHAGE_Staphy_1: Panton-Valentine leukocidin chain S precursor; MW1942; phage(gi156603947)  4e-42  Click