| Definition | Xanthomonas campestris pv. campestris str. ATCC 33913, complete genome. |
|---|---|
| Accession | NC_003902 |
| Length | 5,076,188 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 23 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2423305..2423316 | attL CGCTGCGCGACG | N/A | Click |
| 2 | complement(2435595..2436149) | PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p2; XCC2057; phage(gi70727680) | 1e-05 | Click |
| 3 | 2436368..2437408 | PHAGE_Xantho_Cf1c: Probable site-specific integrase; XCC2058; phage(gi17975748) | 0.0 | Click |
| 4 | 2437405..2437701 | PHAGE_Xantho_Cf1c: V protein; XCC2059; phage(gi17975750) | 1e-44 | Click |
| 5 | 2437733..2437864 | minor coat protein; XCC2060 | N/A | Click |
| 6 | 2437840..2437956 | minor coat protein; XCC2061 | N/A | Click |
| 7 | 2437984..2438112 | major coat protein; XCC2062 | N/A | Click |
| 8 | 2438209..2439300 | PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p6; XCC2063; phage(gi70727684) | 2e-64 | Click |
| 9 | 2439335..2439631 | PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p5; XCC2064; phage(gi70727683) | 7e-21 | Click |
| 10 | 2439633..2440955 | PHAGE_Stenot_phiSMA9: putative zonula occludens toxin; XCC2065; phage(gi70727682) | 7e-138 | Click |
| 11 | 2441082..2441093 | attL GCAGTTCTGCAG | N/A | Click |
| 12 | complement(2441350..2441676) | PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p3; XCC2066; phage(gi70727681) | 1e-14 | Click |
| 13 | 2441850..2442188 | PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p3; XCC2067; phage(gi70727681) | 3e-17 | Click |
| 14 | complement(2442583..2443905) | PHAGE_Stenot_phiSMA9: putative zonula occludens toxin; XCC2068; phage(gi70727682) | 7e-138 | Click |
| 15 | complement(2443907..2444227) | PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p5; XCC2069; phage(gi70727683) | 3e-24 | Click |
| 16 | complement(2444238..2445329) | PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p6; XCC2070; phage(gi70727684) | 2e-64 | Click |
| 17 | complement(2445426..2445554) | major coat protein; XCC2071 | N/A | Click |
| 18 | complement(2445582..2445698) | minor coat protein; XCC2072 | N/A | Click |
| 19 | complement(2445674..2445805) | minor coat protein; XCC2073 | N/A | Click |
| 20 | complement(2445837..2446133) | PHAGE_Xantho_Cf1c: V protein; XCC2074; phage(gi17975750) | 1e-44 | Click |
| 21 | complement(2446130..2447170) | PHAGE_Xantho_Cf1c: Probable site-specific integrase; XCC2075; phage(gi17975748) | 0.0 | Click |
| 22 | 2447456..2447920 | PHAGE_Stenot_phiSMA9: hypothetical protein phiSMA9p2; XCC2076; phage(gi70727680) | 2e-05 | Click |
| 23 | complement(2447869..2448519) | PHAGE_Xantho_Cf1c: hypothetical protein Cf1cp5; XCC2077; phage(gi17975752) | 1e-53 | Click |
| 24 | 2448599..2448610 | attR GCAGTTCTGCAG | N/A | Click |
| 25 | complement(2448648..2450339) | PHAGE_Macaci_1: large tegument protein; XCC2078; phage(gi30984464) | 7e-16 | Click |
| 26 | complement(2450455..2451054) | PHAGE_Prochl_P_SSM2: NifU-like protein; XCC2079; phage(gi61806099) | 6e-07 | Click |
| 27 | 2465700..2465711 | attR CGCTGCGCGACG | N/A | Click |
Region 2, total : 46 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3517530..3517542 | attL GCCGCCGGCAGTG | N/A | Click |
| 2 | complement(3528129..3528833) | PHAGE_Bordet_1: adenine DNA methyltransferase; XCC2967; phage(gi41179391) | 3e-65 | Click |
| 3 | complement(3528751..3528996) | PHAGE_Pseudo_B3: Com translational regulator; XCC2968; phage(gi56692616) | 1e-12 | Click |
| 4 | complement(3529022..3530053) | PHAGE_Pseudo_phiCTX: predicted capsid packaging protein; XCC2969; phage(gi17313219) | 1e-133 | Click |
| 5 | complement(3530053..3531837) | PHAGE_Burkho_KS14: gp35; XCC2970; phage(gi327198304) | 0.0 | Click |
| 6 | 3531959..3532801 | PHAGE_Burkho_KS14: gp34; XCC2971; phage(gi327198303) | 2e-62 | Click |
| 7 | 3532850..3533866 | PHAGE_Pseudo_phiCTX: predicted major capsid protein; XCC2972; phage(gi17313222) | 3e-139 | Click |
| 8 | 3533870..3534589 | PHAGE_Pseudo_phiCTX: predicted terminase subunit; XCC2973; phage(gi17313223) | 1e-73 | Click |
| 9 | 3534688..3535155 | PHAGE_Pseudo_phiCTX: predicted capsid completion protein; XCC2974; phage(gi17313224) | 2e-35 | Click |
| 10 | 3535155..3535364 | PHAGE_Salmon_RE_2010: tail component protein; XCC2975; phage(gi418489702) | 2e-17 | Click |
| 11 | 3535369..3535725 | PHAGE_Burkho_KS14: gp29; XCC2976; phage(gi327198298) | 2e-24 | Click |
| 12 | 3535718..3535993 | PHAGE_Burkho_KS14: gp28; XCC2977; phage(gi327198297) | 6e-10 | Click |
| 13 | 3535990..3536631 | PHAGE_Cronob_ENT47670: putative endolysin; XCC2978; phage(gi431810515) | 5e-35 | Click |
| 14 | 3536631..3537119 | PHAGE_Burkho_KS5: gp32; XCC2979; phage(gi327198030) | 2e-33 | Click |
| 15 | 3537116..3537535 | PHAGE_Burkho_KS14: gp24; XCC2980; phage(gi327198293) | 1e-28 | Click |
| 16 | 3537523..3537981 | PHAGE_Burkho_KS14: gp23; XCC2981; phage(gi327198292) | 5e-34 | Click |
| 17 | 3539112..3540002 | PHAGE_Burkho_KS14: gp20; XCC2982; phage(gi327198289) | 3e-68 | Click |
| 18 | 3539995..3540543 | PHAGE_Burkho_KS14: gp19; XCC2983; phage(gi327198288) | 1e-42 | Click |
| 19 | 3540547..3541752 | PHAGE_Burkho_KS14: gp18; XCC2984; phage(gi327198287) | 6e-37 | Click |
| 20 | 3541706..3541981 | hypothetical protein; XCC2985 | N/A | Click |
| 21 | 3542060..3542623 | PHAGE_Burkho_KS14: gp22; XCC2986; phage(gi327198291) | 9e-26 | Click |
| 22 | 3542620..3542979 | PHAGE_Burkho_KS14: gp21; XCC2987; phage(gi327198290) | 2e-26 | Click |
| 23 | 3542991..3544157 | PHAGE_Burkho_KS14: gp16; XCC2988; phage(gi327198285) | 6e-138 | Click |
| 24 | 3544188..3544697 | PHAGE_Burkho_KS14: gp15; XCC2989; phage(gi327198284) | 3e-59 | Click |
| 25 | 3544743..3545045 | PHAGE_Burkho_KS14: gp13; XCC2990; phage(gi327198282) | 3e-20 | Click |
| 26 | 3545054..3545167 | PHAGE_Burkho_KS14: gp14; XCC2991; phage(gi327198283) | 5e-08 | Click |
| 27 | 3545197..3548067 | PHAGE_Salmon_ST64B: tail protein; XCC2992; phage(gi23505460) | 2e-106 | Click |
| 28 | 3548080..3548481 | PROPHAGE_Salmon_Ty2: putative phage tail protein; XCC2993; phage(gi29143763) | 5e-30 | Click |
| 29 | 3548478..3549464 | PHAGE_Burkho_KS14: gp10; XCC2994; phage(gi327198279) | 1e-89 | Click |
| 30 | 3549751..3550698 | hypothetical protein; XCC2995 | N/A | Click |
| 31 | 3551007..3551471 | hypothetical protein; XCC2996 | N/A | Click |
| 32 | complement(3551778..3552206) | PHAGE_Burkho_phiE202: gp21; XCC2997; phage(gi134288765) | 2e-21 | Click |
| 33 | 3552273..3552527 | PHAGE_Pseudo_B3: hypothetical protein B3ORF17; XCC2998; phage(gi56692585) | 9e-05 | Click |
| 34 | 3552642..3552845 | hypothetical protein; XCC2999 | N/A | Click |
| 35 | 3553024..3553149 | hypothetical protein; XCC3000 | N/A | Click |
| 36 | 3553146..3553385 | hypothetical protein; XCC3001 | N/A | Click |
| 37 | 3553413..3556076 | PHAGE_Pseudo_phiCTX: hypothetical protein phiCTXp40; XCC3002; phage(gi17313257) | 0.0 | Click |
| 38 | 3556657..3556881 | hypothetical protein; XCC3003 | N/A | Click |
| 39 | 3556878..3557141 | hypothetical protein; XCC3004 | N/A | Click |
| 40 | 3557220..3557630 | hypothetical protein; XCC3005 | N/A | Click |
| 41 | 3557644..3557799 | hypothetical protein; XCC3006 | N/A | Click |
| 42 | 3557792..3558067 | hypothetical protein; XCC3007 | N/A | Click |
| 43 | 3558160..3558309 | hypothetical protein; XCC3008 | N/A | Click |
| 44 | 3558486..3558578 | hypothetical protein; XCC3009 | N/A | Click |
| 45 | 3558575..3558781 | hypothetical protein; XCC3010 | N/A | Click |
| 46 | 3558739..3558999 | hypothetical protein; XCC3011 | N/A | Click |
| 47 | 3558747..3558759 | attR GCCGCCGGCAGTG | N/A | Click |
| 48 | 3558999..3560198 | PROPHAGE_Xantho_306: phage-related integrase; XCC3012; phage(gi21243357) | 9e-131 | Click |
Region 3, total : 16 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(4258232..4259446) | PROPHAGE_Xantho_33913: IS1481 transposase; XCC3571; phage(gi21229606) | 0.0 | Click |
| 2 | 4259721..4259987 | PROPHAGE_Xantho_33913: ISxcc1 transposase; XCC3572; phage(gi21231059) | 4e-45 | Click |
| 3 | 4260248..4260829 | PROPHAGE_Xantho_33913: ISxcC1 transposase; XCC3573; phage(gi21231060) | 8e-113 | Click |
| 4 | 4260786..4261196 | PHAGE_Burkho_KS14: gp22; XCC3574; phage(gi327198291) | 9e-11 | Click |
| 5 | 4262587..4262850 | PROPHAGE_Xantho_33913: IS1404 transposase; XCC3575; phage(gi21232568) | 1e-44 | Click |
| 6 | 4262664..4263689 | PROPHAGE_Xantho_33913: IS1404 transposase; XCC3576; phage(gi21232569) | 0.0 | Click |
| 7 | 4263775..4265055 | hypothetical protein; XCC3577 | N/A | Click |
| 8 | 4265285..4266274 | PROPHAGE_Xantho_33913: IS1481 transposase; XCC3578; phage(gi21229606) | 0.0 | Click |
| 9 | complement(4266279..4266566) | PROPHAGE_Xantho_33913: ISxac3 transposase; XCC3579; phage(gi21231086) | 3e-48 | Click |
| 10 | complement(4266575..4267627) | PROPHAGE_Xantho_33913: IS1477 transposase; XCC3580; phage(gi77747809) | 0.0 | Click |
| 11 | complement(4267441..4267707) | PROPHAGE_Xantho_33913: IS1477 transposase; XCC3581; phage(gi21230912) | 2e-45 | Click |
| 12 | complement(4267754..4268335) | PROPHAGE_Xantho_33913: ISxac3 transposase; XCC3582; phage(gi21231086) | 4e-110 | Click |
| 13 | complement(4268380..4268658) | PROPHAGE_Xantho_33913: ISxac3 transposase; XCC3583; phage(gi21231087) | 5e-46 | Click |
| 14 | 4268986..4269999 | hypothetical protein; XCC3584 | N/A | Click |
| 15 | 4270226..4271206 | PROPHAGE_Xantho_33913: IS1479 transposase; XCC3585; phage(gi21229605) | 0.0 | Click |
| 16 | complement(4271466..4272833) | PROPHAGE_Xantho_33913: IS1478 transposase; XCC3586; phage(gi77747808) | 0.0 | Click |