Definition Listeria innocua Clip11262, complete genome.
Accession NC_003212
Length 3,011,208
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 64 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 73144..74196  PHAGE_Acanth_mimivirus: probable methylated-DNA--protein-cysteine methyltransferase; lin0068; phage(gi311978100)  4e-19  Click
2 complement(74218..74856)  PHAGE_Staphy_SA11: hypothetical protein; lin0069; phage(gi422935622)  6e-06  Click
3 74988..75944  PHAGE_Parame_1: hypothetical protein; lin0070; phage(gi9631622)  8e-34  Click
4 76030..76102  tRNA  N/A  Click
5 76060..76107  attL    ACTCTTAATCAGCGGGTCGGGGGTTCGAAACCCTCACAACCCATATAT  N/A  Click
6 complement(76209..77411)  PHAGE_Lister_A500: Int; lin0071; phage(gi157324990)  0.0  Click
7 complement(77476..78126)  hypothetical protein; lin0072  N/A  Click
8 complement(78505..78981)  PHAGE_Lister_A500: gp33; lin0073; phage(gi157324992)  4e-43  Click
9 79378..79644  PHAGE_Lister_A118: gp37; lin0074; phage(gi16798821)  3e-43  Click
10 complement(79573..79803)  PHAGE_Lister_A118: gp37-1; lin0075; phage(gi16798822)  2e-38  Click
11 79869..80063  hypothetical protein; lin0076  N/A  Click
12 80075..80311  PHAGE_Lister_A500: gp35; lin0077; phage(gi157324994)  5e-11  Click
13 80308..80589  PHAGE_Lister_A118: gp41; lin0078; phage(gi16798827)  7e-40  Click
14 complement(80775..81017)  hypothetical protein; lin0079  N/A  Click
15 81081..81854  PHAGE_Lister_A006: gp36; lin0080; phage(gi157325452)  3e-142  Click
16 81973..82497  PHAGE_Lister_A500: gp38; lin0081; phage(gi157324997)  1e-86  Click
17 82504..82689  PHAGE_Lister_A500: gp39; lin0082; phage(gi157324998)  2e-28  Click
18 82705..82893  PHAGE_Lister_A006: gp39; lin0083; phage(gi157325455)  2e-30  Click
19 83126..84085  PHAGE_Lister_A006: gp41; lin0084; phage(gi157325458)  1e-178  Click
20 84085..84900  PHAGE_Lister_A006: gp42; lin0085; phage(gi157325459)  2e-152  Click
21 84921..85832  PHAGE_Lister_A500: gp45; lin0086; phage(gi157325004)  6e-68  Click
22 85829..85996  PHAGE_Lister_A500: gp46; lin0087; phage(gi157325005)  4e-22  Click
23 86290..87102  PHAGE_Lister_2389: methylase; lin0088; phage(gi17488539)  8e-154  Click
24 87099..87728  PHAGE_Lister_A500: gp49; lin0089; phage(gi157325008)  2e-15  Click
25 87725..88246  PHAGE_Lister_A500: gp52; lin0090; phage(gi157325010)  7e-33  Click
26 88373..88765  PHAGE_Staphy_phi13: possible sensor protein; lin0091; phage(gi29028688)  3e-07  Click
27 88762..88947  PHAGE_Lister_vB_LmoM_AG20: hypothetical protein; lin0092; phage(gi472437273)  3e-26  Click
28 88944..89234  PHAGE_Lister_2389: Gp37 protein; lin0093; phage(gi17488542)  1e-46  Click
29 89231..89437  PHAGE_Lister_B025: gp47; lin0094; phage(gi157325264)  8e-30  Click
30 89438..89839  PHAGE_Lister_A118: gp59; lin0095; phage(gi16798846)  5e-47  Click
31 89836..90336  hypothetical protein; lin0096  N/A  Click
32 90333..90812  PHAGE_Lister_A500: gp56; lin0097; phage(gi157325015)  8e-80  Click
33 90831..91013  PHAGE_Lister_A500: gp57; lin0098; phage(gi157325016)  1e-20  Click
34 90958..91362  PHAGE_Lister_A500: gp58; lin0099; phage(gi157325017)  1e-64  Click
35 91366..91749  PHAGE_Lister_A500: gp59; lin0100; phage(gi157325018)  5e-62  Click
36 91890..92324  PHAGE_Lister_A500: gp62; lin0101; phage(gi157325021)  2e-74  Click
37 92534..92710  hypothetical protein; lin0102  N/A  Click
38 92769..93032  PHAGE_Lactob_LP65: hypothetical protein LP65_gp078; lin0103; phage(gi56693126)  8e-28  Click
39 93090..93632  PHAGE_Lister_A500: TerS; lin0104; phage(gi157324961)  4e-95  Click
40 93601..94932  PHAGE_Lister_A500: TerL; lin0105; phage(gi157324962)  0.0  Click
41 94945..96714  PHAGE_Lister_A500: gp3; lin0106; phage(gi157324963)  0.0  Click
42 96715..97854  PHAGE_Lister_A500: gp4; lin0107; phage(gi157324964)  0.0  Click
43 97933..98502  PHAGE_Lister_A500: gp5; lin0108; phage(gi157324965)  2e-56  Click
44 98526..99425  PHAGE_Lister_A118: major capsid protein; lin0109; phage(gi16798789)  2e-159  Click
45 99425..99583  PHAGE_Lister_A500: gp7; lin0110; phage(gi157324967)  9e-19  Click
46 99585..99980  PHAGE_Lister_A500: gp8; lin0111; phage(gi157324968)  2e-69  Click
47 99980..100342  PHAGE_Lister_A500: gp9; lin0112; phage(gi157324969)  2e-66  Click
48 100342..100680  PHAGE_Lister_A500: gp10; lin0113; phage(gi157324970)  3e-60  Click
49 100680..101087  PHAGE_Lister_A500: gp11; lin0114; phage(gi157324971)  2e-70  Click
50 101090..101527  PHAGE_Lister_A500: Tsh; lin0115; phage(gi157324972)  4e-81  Click
51 101842..102264  PHAGE_Lister_A500: gp14; lin0117; phage(gi157324974)  3e-76  Click
52 102270..102872  PHAGE_Lister_A500: gp15; lin0118; phage(gi157324976)  6e-112  Click
53 102883..108249  PHAGE_Lister_A500: Tmp; lin0119; phage(gi157324975)  0.0  Click
54 108246..109073  PHAGE_Lister_A500: gp17; lin0120; phage(gi157324977)  6e-162  Click
55 109073..110110  PHAGE_Lister_A500: gp18; lin0121; phage(gi157324978)  0.0  Click
56 110111..111136  PHAGE_Lister_A500: gp19; lin0122; phage(gi157324979)  0.0  Click
57 111133..112200  PHAGE_Lister_A500: gp20; lin0123; phage(gi157324980)  0.0  Click
58 112197..112538  PHAGE_Lister_A500: gp21; lin0124; phage(gi157324981)  1e-59  Click
59 112539..112685  PHAGE_Lister_A500: gp22; lin0125; phage(gi157324982)  8e-22  Click
60 112722..113087  PHAGE_Lister_A500: gp23; lin0126; phage(gi157324983)  4e-63  Click
61 113100..113381  PHAGE_Lister_A500: Hol; lin0127; phage(gi157324984)  3e-47  Click
62 113381..114250  PHAGE_Lister_A500: PlyA500; lin0128; phage(gi157324985)  2e-170  Click
63 114275..114691  PHAGE_Lister_B025: gp26; lin0129; phage(gi157325243)  5e-29  Click
64 115501..115548  attR    ACTCTTAATCAGCGGGTCGGGGGTTCGAAACCCTCACAACCCATATAT  N/A  Click
65 115716..116072  hypothetical protein; lin0130  N/A  Click
66 116483..117142  hypothetical protein; lin0131  N/A  Click
67 117256..123096  PHAGE_Megavi_lba: hypothetical protein; lin0132; phage(gi448825518)  2e-06  Click
Region 2, total : 24 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(151526..153268)  PHAGE_Bacill_SPBc2: ABC transporter; lin0156; phage(gi9630145)  4e-30  Click
2 153411..154244  hypothetical protein; lin0157  N/A  Click
3 154394..155092  hypothetical protein; lin0158  N/A  Click
4 complement(155062..155757)  hypothetical protein; lin0159  N/A  Click
5 complement(155931..156383)  PHAGE_Lister_A118: gp35; lin0160; phage(gi16798818)  2e-29  Click
6 complement(156389..156742)  PHAGE_Staphy_92: ORF019; lin0161; phage(gi66396425)  3e-15  Click
7 156943..157371  PHAGE_Lister_A118: gp61; lin0162; phage(gi16798848)  1e-17  Click
8 157383..157799  PHAGE_Lister_A118: gp66; lin0163; phage(gi16798853)  3e-22  Click
9 158079..158468  antigen B; lin0164  N/A  Click
10 158481..158993  PHAGE_Clostr_phi8074_B1: putative phage major tail protein; lin0165; phage(gi431810369)  1e-18  Click
11 159041..159343  PHAGE_Strept_5: hypothetical protein SpyM3_1315; lin0166; phage(gi28876397)  2e-08  Click
12 159454..159789  PHAGE_Strept_5: hypothetical protein SpyM3_1314; lin0167; phage(gi28876396)  1e-19  Click
13 159776..161644  PHAGE_Propio_P100_A: putative tape measure; lin0168; phage(gi410491193)  3e-46  Click
14 161641..162459  PHAGE_Lister_A118: gp17; lin0169; phage(gi16798800)  3e-43  Click
15 162469..163605  PHAGE_Lister_A118: gp18; lin0170; phage(gi16798801)  4e-50  Click
16 163595..163894  hypothetical protein; lin0171  N/A  Click
17 163909..164484  hypothetical protein; lin0172  N/A  Click
18 164499..164978  PHAGE_Deep_s_D6E: tail fiber protein; lin0173; phage(gi423262345)  5e-06  Click
19 164975..165511  PHAGE_Lister_A118: gp20; lin0174; phage(gi16798803)  4e-06  Click
20 165530..165952  PHAGE_Bacill_WBeta: phage holin; lin0175; phage(gi85701395)  6e-32  Click
21 165933..166661  PHAGE_Bacill_SPP1: hypothetical protein SPP1p051; lin0176; phage(gi22855096)  1e-38  Click
22 complement(166696..169053)  PROPHAGE_Pseudo_PAO1: coat protein A of bacteriophage Pf1; lin0177; phage(gi15595921)  5e-06  Click
23 169241..169990  hypothetical protein; lin0178  N/A  Click
24 complement(170062..171570)  PHAGE_Staphy_42E: ORF012; lin0179; phage(gi66395520)  3e-18  Click
Region 3, total : 73 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1245851..1246246)  PHAGE_Lister_B054: gp41; lin1230; phage(gi157325325)  5e-13  Click
2 1246499..1246510  attL    AAGTACACATCA  N/A  Click
3 complement(1246563..1247978)  PHAGE_Bacill_phi105: site-specific recombinase for integration and excision; lin1231; phage(gi22855025)  6e-111  Click
4 complement(1248055..1248726)  hypothetical protein; lin1232  N/A  Click
5 complement(1248769..1249188)  PHAGE_Lister_B054: gp40; lin1233; phage(gi157325324)  2e-66  Click
6 complement(1249205..1249633)  PHAGE_Lister_B054: gp41; lin1234; phage(gi157325325)  1e-72  Click
7 1249793..1249978  PHAGE_Lister_B054: gp42; lin1235; phage(gi157325326)  1e-27  Click
8 1250055..1250579  PHAGE_Lister_B054: gp43; lin1236; phage(gi157325327)  1e-78  Click
9 1250592..1250750  hypothetical protein; lin1237  N/A  Click
10 1250744..1250908  PHAGE_Lister_B054: gp45; lin1238; phage(gi157325329)  9e-13  Click
11 1251058..1251342  PHAGE_Lister_B054: gp46; lin1239; phage(gi157325330)  8e-28  Click
12 1251765..1252106  PHAGE_Lister_B054: gp48; lin1240; phage(gi157325332)  2e-59  Click
13 1252093..1254033  PHAGE_Lister_B054: gp49; lin1241; phage(gi157325333)  0.0  Click
14 1254035..1254046  attL    AAATGGCAAAAG  N/A  Click
15 1254037..1254819  PHAGE_Lister_B054: gp50; lin1242; phage(gi157325334)  3e-139  Click
16 1254758..1255516  PHAGE_Lister_B054: gp51; lin1243; phage(gi157325335)  4e-130  Click
17 1255528..1256445  PHAGE_Lister_B054: gp52; lin1244; phage(gi157325336)  2e-171  Click
18 1256321..1257184  PHAGE_Lister_B054: gp53; lin1245; phage(gi157325337)  1e-149  Click
19 1257362..1257589  PHAGE_Lister_B054: gp55; lin1246; phage(gi157325339)  1e-29  Click
20 1257546..1257785  PHAGE_Lister_B054: gp56; lin1247; phage(gi157325340)  5e-33  Click
21 1257766..1258203  PHAGE_Lister_B054: gp57; lin1248; phage(gi157325341)  3e-76  Click
22 1258225..1258845  PHAGE_Lister_B054: gp58; lin1249; phage(gi157325342)  1e-104  Click
23 1258886..1259263  PHAGE_Lister_B054: gp59; lin1250; phage(gi157325343)  1e-58  Click
24 1259223..1259399  PHAGE_Lister_B054: gp60; lin1251; phage(gi157325344)  2e-24  Click
25 1259411..1259833  PHAGE_Lister_B054: gp61; lin1252; phage(gi157325345)  3e-67  Click
26 1259830..1261191  PHAGE_Lister_B054: gp62; lin1253; phage(gi157325346)  0.0  Click
27 1261428..1262372  PHAGE_Lister_B054: gp64; lin1254; phage(gi157325348)  0.0  Click
28 1262385..1263065  PHAGE_Lister_B054: gp65; lin1255; phage(gi157325349)  2e-128  Click
29 1263062..1263355  PHAGE_Lister_B054: gp66; lin1256; phage(gi157325350)  3e-50  Click
30 complement(1263766..1264293)  hypothetical protein; lin1257  N/A  Click
31 1264368..1264922  PHAGE_Lister_B054: gp70; lin1258; phage(gi157325353)  2e-98  Click
32 1265000..1265425  PHAGE_Lister_B054: gp71; lin1259; phage(gi157325354)  2e-74  Click
33 1265438..1266205  PHAGE_Lister_B054: gp72; lin1260; phage(gi157325355)  8e-142  Click
34 1266855..1267334  hypothetical protein; lin1261  N/A  Click
35 1267399..1268736  PHAGE_Lister_B054: gp77; lin1262; phage(gi157325361)  0.0  Click
36 1268784..1268981  PHAGE_Lister_B054: gp78; lin1263; phage(gi157325362)  1e-30  Click
37 1269111..1269341  PHAGE_Lister_B054: gp79; lin1264; phage(gi157325363)  1e-32  Click
38 1269369..1269593  PHAGE_Lister_B054: gp80; lin1265; phage(gi157325364)  4e-38  Click
39 1269646..1270482  PHAGE_Lister_B054: TerS; lin1266; phage(gi157325285)  8e-34  Click
40 1270469..1271803  PHAGE_Bacill_PM1: hypothetical protein; lin1267; phage(gi472438300)  1e-134  Click
41 1271793..1273367  PHAGE_Vibrio_SIO_2: capsid portal protein; lin1268; phage(gi371496385)  4e-36  Click
42 1273354..1275102  PHAGE_Plankt_PaV_LD: virion structural protein; lin1269; phage(gi371496206)  3e-09  Click
43 1275480..1276574  PHAGE_Methan_psiM100: putative structural protein; lin1270; phage(gi11863104)  8e-17  Click
44 1276590..1277519  PHAGE_Natria_PhiCh1: capsid protein gpE; lin1271; phage(gi22091115)  3e-14  Click
45 1277525..1277737  hypothetical protein; lin1272  N/A  Click
46 1277749..1278153  hypothetical protein; lin1273  N/A  Click
47 1278155..1278514  hypothetical protein; lin1274  N/A  Click
48 1278514..1279020  hypothetical protein; lin1275  N/A  Click
49 1279030..1279509  hypothetical protein; lin1276  N/A  Click
50 1279502..1279738  hypothetical protein; lin1277  N/A  Click
51 1279740..1281098  PHAGE_Strept_1: sheath tail protein; lin1278; phage(gi39653727)  4e-80  Click
52 1281100..1281546  PHAGE_Strept_1: core tail protein; lin1279; phage(gi39653728)  1e-25  Click
53 1281621..1282109  PHAGE_Clostr_phiC2: hypothetical protein phiC2p16; lin1280; phage(gi134287351)  1e-11  Click
54 1282298..1286263  PHAGE_Clostr_phiMMP04: tail tape measure; lin1282; phage(gi414090455)  8e-26  Click
55 1286256..1286939  PHAGE_Clostr_phiMMP04: peptidoglycan-binding lysin domain protein; lin1283; phage(gi414090456)  1e-24  Click
56 1286950..1287927  PHAGE_Clostr_phiC2: putative hydrolase; lin1284; phage(gi134287357)  2e-28  Click
57 1287927..1288181  hypothetical protein; lin1285  N/A  Click
58 1288196..1288603  PHAGE_Strept_1: hypothetical protein EJ-1p60; lin1286; phage(gi39653734)  5e-10  Click
59 1288604..1289689  PHAGE_Strept_1: tail protein; lin1287; phage(gi39653735)  2e-41  Click
60 1289700..1290269  PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp28; lin1288; phage(gi90592664)  2e-07  Click
61 1290266..1290535  hypothetical protein; lin1289  N/A  Click
62 1290537..1291358  PHAGE_Lister_B054: gp26; lin1290; phage(gi157325310)  2e-79  Click
63 1291364..1291705  PHAGE_Lister_B054: gp27; lin1291; phage(gi157325311)  3e-55  Click
64 1291735..1291860  PHAGE_Lister_B054: gp28; lin1292; phage(gi157325312)  3e-16  Click
65 1291891..1292337  PHAGE_Lister_B054: gp29; lin1293; phage(gi157325313)  6e-71  Click
66 1292313..1292759  PHAGE_Lister_B054: gp30; lin1294; phage(gi157325314)  1e-76  Click
67 1292853..1293116  PHAGE_Lister_B054: Hol; lin1295; phage(gi157325316)  3e-40  Click
68 1293117..1293128  attR    AAATGGCAAAAG  N/A  Click
69 1293119..1293952  PHAGE_Lister_B054: PlyB054; lin1296; phage(gi157325317)  2e-19  Click
70 complement(1294014..1294235)  PHAGE_Lister_B054: gp34; lin1297; phage(gi157325318)  5e-35  Click
71 complement(1294263..1294466)  PHAGE_Lister_B054: gp35; lin1298; phage(gi157325319)  3e-33  Click
72 complement(1294480..1294845)  PHAGE_Lister_B054: gp36; lin1299; phage(gi157325320)  1e-62  Click
73 1295418..1296029  hypothetical protein; lin1300  N/A  Click
74 1296051..1296416  hypothetical protein; lin1301  N/A  Click
75 1296787..1297008  PHAGE_Lister_A006: gp27; lin1302; phage(gi157325442)  1e-24  Click
76 1297054..1297065  attR    AAGTACACATCA  N/A  Click
77 1297270..1297803  PHAGE_Xestia_granulovirus: ORF40; lin1303; phage(gi9635290)  5e-05  Click
Region 4, total : 72 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1710189..1710200  attL    ATTTCATTTGAA  N/A  Click
2 1711514..1711525  attL    ATATTAGTTAAT  N/A  Click
3 1713958..1714335  PHAGE_Lister_A118: gp30; lin1697; phage(gi16798813)  1e-67  Click
4 1714369..1714719  PHAGE_Lister_A118: gp29; lin1698; phage(gi16798812)  9e-59  Click
5 1714724..1715173  PHAGE_Lister_A006: gp23; lin1699; phage(gi157325438)  2e-68  Click
6 complement(1715216..1716142)  PHAGE_Lister_B054: PlyB054; lin1700; phage(gi157325317)  2e-60  Click
7 complement(1716145..1716378)  hypothetical protein; lin1701  N/A  Click
8 complement(1716378..1716638)  PHAGE_Lister_2389: holin; lin1702; phage(gi17488523)  5e-37  Click
9 complement(1716649..1716864)  PHAGE_Lister_B054: gp31; lin1703; phage(gi157325315)  4e-28  Click
10 complement(1716883..1717329)  PHAGE_Lister_B054: gp30; lin1704; phage(gi157325314)  1e-74  Click
11 complement(1717305..1717751)  PHAGE_Lister_B054: gp29; lin1705; phage(gi157325313)  5e-72  Click
12 complement(1717783..1717908)  PHAGE_Lister_B054: gp28; lin1706; phage(gi157325312)  3e-16  Click
13 complement(1717938..1718279)  PHAGE_Lister_B054: gp27; lin1707; phage(gi157325311)  2e-52  Click
14 complement(1718285..1719013)  PHAGE_Lister_B054: gp26; lin1708; phage(gi157325310)  9e-140  Click
15 complement(1719034..1719675)  PHAGE_Lister_B054: gp25; lin1709; phage(gi157325309)  2e-116  Click
16 complement(1719665..1720816)  PHAGE_Lister_B054: gp24; lin1710; phage(gi157325308)  0.0  Click
17 complement(1720809..1721171)  PHAGE_Lister_B054: gp23; lin1711; phage(gi157325307)  1e-61  Click
18 complement(1721168..1721506)  PHAGE_Lister_B054: gp22; lin1712; phage(gi157325306)  3e-59  Click
19 complement(1721507..1722313)  PHAGE_Lister_B054: gp21; lin1713; phage(gi157325305)  3e-150  Click
20 complement(1722313..1722678)  PHAGE_Lister_B054: gp20; lin1714; phage(gi157325304)  6e-65  Click
21 complement(1722678..1723241)  PHAGE_Lister_B054: gp19; lin1715; phage(gi157325303)  1e-106  Click
22 complement(1723247..1727962)  PHAGE_Lister_B054: Tmp; lin1716; phage(gi157325302)  0.0  Click
23 complement(1727964..1728176)  PHAGE_Lister_B054: gp17; lin1717; phage(gi157325301)  4e-34  Click
24 complement(1728139..1728495)  PHAGE_Lister_B054: gp16; lin1718; phage(gi157325300)  2e-63  Click
25 complement(1728548..1728946)  PHAGE_Lister_B054: gp15; lin1719; phage(gi157325299)  3e-71  Click
26 complement(1728963..1729958)  PHAGE_Lister_B054: gp14; lin1720; phage(gi157325298)  0.0  Click
27 complement(1729963..1730451)  PHAGE_Lister_B054: gp13; lin1721; phage(gi157325297)  1e-88  Click
28 complement(1730441..1730815)  PHAGE_Lister_B054: gp12; lin1722; phage(gi157325296)  3e-67  Click
29 complement(1730815..1731414)  PHAGE_Lister_B054: gp11; lin1723; phage(gi157325295)  1e-111  Click
30 complement(1731414..1731749)  PHAGE_Lister_B054: gp10; lin1724; phage(gi157325294)  1e-56  Click
31 complement(1731761..1732147)  PHAGE_Lister_B054: gp9; lin1725; phage(gi157325293)  1e-67  Click
32 complement(1732170..1733075)  PHAGE_Lister_B054: gp8; lin1726; phage(gi157325292)  2e-166  Click
33 complement(1733096..1733545)  PHAGE_Lister_B054: gp7; lin1727; phage(gi157325291)  3e-79  Click
34 complement(1733545..1734654)  PHAGE_Lister_B054: gp6; lin1728; phage(gi157325290)  0.0  Click
35 complement(1734703..1734873)  PHAGE_Lister_B054: gp5; lin1729; phage(gi157325289)  2e-28  Click
36 complement(1734870..1736279)  PHAGE_Lister_B054: gp4; lin1730; phage(gi157325288)  0.0  Click
37 complement(1736272..1737657)  PHAGE_Lister_B054: gp3; lin1731; phage(gi157325287)  0.0  Click
38 complement(1737671..1739131)  PHAGE_Lister_B054: TerL; lin1732; phage(gi157325286)  0.0  Click
39 complement(1739109..1739993)  PHAGE_Lister_B054: TerS; lin1733; phage(gi157325285)  7e-164  Click
40 complement(1740039..1740263)  PHAGE_Lister_B054: gp80; lin1734; phage(gi157325364)  4e-38  Click
41 complement(1740291..1740521)  PHAGE_Lister_B054: gp79; lin1735; phage(gi157325363)  7e-37  Click
42 complement(1740652..1740849)  PHAGE_Lister_B054: gp78; lin1736; phage(gi157325362)  6e-31  Click
43 complement(1740897..1742234)  PHAGE_Lister_B054: gp77; lin1737; phage(gi157325361)  0.0  Click
44 complement(1743052..1743819)  PHAGE_Lister_B054: gp72; lin1738; phage(gi157325355)  2e-142  Click
45 complement(1743832..1744257)  PHAGE_Lister_B054: gp71; lin1739; phage(gi157325354)  2e-74  Click
46 complement(1744335..1744895)  PHAGE_Lister_B054: gp70; lin1740; phage(gi157325353)  5e-105  Click
47 complement(1744907..1745158)  PHAGE_Lister_B054: gp69; lin1741; phage(gi157325352)  5e-44  Click
48 complement(1745742..1746422)  PHAGE_Lister_B054: gp65; lin1742; phage(gi157325349)  2e-128  Click
49 complement(1746435..1747379)  PHAGE_Lister_B054: gp64; lin1743; phage(gi157325348)  0.0  Click
50 complement(1747616..1748977)  PHAGE_Lister_B054: gp62; lin1744; phage(gi157325346)  0.0  Click
51 complement(1748974..1749396)  PHAGE_Lister_B054: gp61; lin1745; phage(gi157325345)  3e-67  Click
52 complement(1749408..1749584)  PHAGE_Lister_B054: gp60; lin1746; phage(gi157325344)  2e-24  Click
53 complement(1749544..1749921)  PHAGE_Lister_B054: gp59; lin1747; phage(gi157325343)  1e-58  Click
54 complement(1749962..1750582)  PHAGE_Lister_B054: gp58; lin1748; phage(gi157325342)  1e-104  Click
55 complement(1750604..1751041)  PHAGE_Lister_B054: gp57; lin1749; phage(gi157325341)  3e-76  Click
56 complement(1751022..1751261)  PHAGE_Lister_B054: gp56; lin1750; phage(gi157325340)  5e-33  Click
57 complement(1751218..1751445)  PHAGE_Lister_B054: gp55; lin1751; phage(gi157325339)  1e-29  Click
58 complement(1751623..1752486)  PHAGE_Lister_B054: gp53; lin1752; phage(gi157325337)  1e-149  Click
59 complement(1752362..1753279)  PHAGE_Lister_B054: gp52; lin1753; phage(gi157325336)  2e-171  Click
60 complement(1753291..1754049)  PHAGE_Lister_B054: gp51; lin1754; phage(gi157325335)  4e-130  Click
61 complement(1753988..1754770)  PHAGE_Lister_B054: gp50; lin1755; phage(gi157325334)  3e-139  Click
62 complement(1754774..1756756)  PHAGE_Lister_B054: gp49; lin1756; phage(gi157325333)  0.0  Click
63 complement(1756701..1757042)  PHAGE_Lister_B054: gp48; lin1757; phage(gi157325332)  2e-59  Click
64 complement(1757060..1757287)  PHAGE_Lister_B054: gp47; lin1758; phage(gi157325331)  1e-35  Click
65 complement(1757465..1757755)  PHAGE_Lister_B054: gp46; lin1759; phage(gi157325330)  2e-51  Click
66 complement(1758382..1758906)  PHAGE_Lister_B054: gp43; lin1760; phage(gi157325327)  2e-95  Click
67 1758971..1758982  attR    ATATTAGTTAAT  N/A  Click
68 complement(1758978..1759202)  PHAGE_Lactob_Lj771: cl repressor; lin1761; phage(gi163932156)  2e-06  Click
69 1759363..1759803  PHAGE_Lister_B054: gp41; lin1762; phage(gi157325325)  4e-16  Click
70 1759826..1760248  PHAGE_Lister_B054: gp40; lin1763; phage(gi157325324)  5e-16  Click
71 1760284..1760832  hypothetical protein; lin1764  N/A  Click
72 1760914..1762089  PHAGE_Lister_B054: gp38; lin1765; phage(gi157325322)  0.0  Click
73 complement(1762250..1763134)  elongation factor Ts; lin1766  N/A  Click
74 complement(1763214..1763963)  30S ribosomal protein S2; lin1767  N/A  Click
75 complement(1764158..1764535)  PHAGE_Lister_B054: gp71; lin1768; phage(gi157325354)  8e-06  Click
76 complement(1764667..1767078)  PHAGE_Acanth_moumouvirus: isoleucyl-tRNA synthetase; lin1769; phage(gi441432219)  2e-12  Click
77 1767456..1767467  attR    ATTTCATTTGAA  N/A  Click
Region 5, total : 56 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2406426..2406437  attL    AAATGAAAAAAG  N/A  Click
2 complement(2406902..2407135)  PHAGE_Lister_A006: gp26; lin2372; phage(gi157325441)  3e-39  Click
3 complement(2407382..2408278)  PHAGE_Clostr_phiC2: putative abortive infection bacteriophage resistance protein ORF 37; lin2373; phage(gi134287370)  2e-40  Click
4 complement(2408641..2409591)  PHAGE_Lister_A500: PlyA500; lin2374; phage(gi157324985)  4e-72  Click
5 complement(2409591..2409872)  PHAGE_Lister_A006: Hol; lin2375; phage(gi157325433)  9e-48  Click
6 complement(2409872..2410177)  PHAGE_Lister_A006: gp18; lin2376; phage(gi157325432)  4e-50  Click
7 complement(2410218..2410364)  PHAGE_Lister_2389: Gp17 protein; lin2377; phage(gi17488520)  1e-20  Click
8 complement(2410365..2410706)  PHAGE_Lister_A500: gp21; lin2378; phage(gi157324981)  1e-59  Click
9 complement(2410703..2411776)  PHAGE_Lister_A500: gp20; lin2379; phage(gi157324980)  0.0  Click
10 complement(2411773..2412801)  PHAGE_Lister_A500: gp19; lin2380; phage(gi157324979)  1e-121  Click
11 complement(2412798..2413811)  PHAGE_Lactob_phig1e: hypothetical protein phig1ep22; lin2381; phage(gi23455812)  4e-51  Click
12 complement(2413824..2414648)  PHAGE_Geobac_E2: hypothetical protein GBVE2_gp016; lin2382; phage(gi148747744)  9e-43  Click
13 complement(2414652..2419457)  PHAGE_Lister_A006: gp15; lin2383; phage(gi157325429)  0.0  Click
14 complement(2419770..2420201)  PHAGE_Lister_A006: gp13; lin2384; phage(gi157325427)  9e-74  Click
15 complement(2420251..2420937)  PHAGE_Lister_A006: Tsh; lin2385; phage(gi157325426)  6e-116  Click
16 complement(2420942..2421313)  PHAGE_Lister_A006: gp11; lin2386; phage(gi157325425)  1e-64  Click
17 complement(2421617..2421982)  PHAGE_Lister_A006: gp9; lin2387; phage(gi157325484)  9e-64  Click
18 complement(2421982..2422335)  PHAGE_Lister_A006: gp8; lin2388; phage(gi157325483)  2e-62  Click
19 complement(2422336..2422491)  PHAGE_Lister_A006: gp7; lin2389; phage(gi157325482)  6e-12  Click
20 complement(2422505..2423377)  PHAGE_Lister_A006: Cps; lin2390; phage(gi157325479)  1e-146  Click
21 complement(2423400..2423954)  PHAGE_Lister_A006: gp5; lin2391; phage(gi157325467)  5e-99  Click
22 complement(2424049..2425092)  PHAGE_Lister_A006: gp4; lin2392; phage(gi157325456)  0.0  Click
23 complement(2425097..2426653)  PHAGE_Lister_A006: gp3; lin2393; phage(gi157325445)  0.0  Click
24 complement(2426668..2427987)  PHAGE_Lister_A006: TerL; lin2394; phage(gi157325434)  0.0  Click
25 complement(2427980..2428720)  PHAGE_Lister_A006: TerS; lin2395; phage(gi157325423)  4e-139  Click
26 complement(2428760..2428987)  PHAGE_Lister_A006: gp62; lin2396; phage(gi157325481)  1e-33  Click
27 complement(2429269..2429841)  PHAGE_Staphy_SpaA1: sigma70, RNA polymerase sigma factor, positive control factor Xpf (C-terminal region); lin2397; phage(gi399498918)  3e-11  Click
28 complement(2429929..2430084)  hypothetical protein; lin2398  N/A  Click
29 complement(2430125..2430508)  PHAGE_Lister_A500: gp59; lin2399; phage(gi157325018)  9e-40  Click
30 complement(2430512..2430916)  PHAGE_Lister_A500: gp58; lin2400; phage(gi157325017)  2e-61  Click
31 complement(2430861..2431043)  PHAGE_Lister_A500: gp57; lin2401; phage(gi157325016)  9e-18  Click
32 complement(2431065..2431547)  PHAGE_Lister_A006: gp53; lin2402; phage(gi157325471)  2e-71  Click
33 complement(2431924..2432103)  PHAGE_Lister_B025: gp50; lin2403; phage(gi157325267)  3e-24  Click
34 complement(2432100..2432270)  PHAGE_Lister_vB_LmoM_AG20: hypothetical protein; lin2404; phage(gi472437300)  6e-10  Click
35 complement(2432412..2432621)  hypothetical protein; lin2405  N/A  Click
36 complement(2432836..2432982)  PHAGE_Lister_A006: gp46; lin2406; phage(gi157325463)  6e-22  Click
37 complement(2433490..2433720)  PHAGE_Lister_B025: gp44; lin2408; phage(gi157325261)  8e-33  Click
38 complement(2433733..2434677)  PHAGE_Bacill_BCJA1c: integrase; lin2409; phage(gi56694872)  5e-51  Click
39 complement(2434688..2435401)  PHAGE_Lister_B025: gp42; lin2410; phage(gi157325259)  3e-135  Click
40 complement(2435422..2435697)  PHAGE_Lister_A500: gp36; lin2411; phage(gi157324995)  3e-15  Click
41 complement(2435694..2436626)  PHAGE_Lister_A006: gp43; lin2412; phage(gi157325460)  5e-179  Click
42 complement(2436646..2437461)  PHAGE_Lister_A006: gp42; lin2413; phage(gi157325459)  1e-153  Click
43 complement(2437461..2438420)  PHAGE_Lister_A006: gp41; lin2414; phage(gi157325458)  0.0  Click
44 complement(2438652..2438840)  PHAGE_Lister_A006: gp39; lin2415; phage(gi157325455)  5e-22  Click
45 complement(2438948..2439163)  PHAGE_Lister_A118: gp44; lin2416; phage(gi16798831)  1e-30  Click
46 complement(2439160..2439693)  PHAGE_Lister_A006: gp37; lin2417; phage(gi157325453)  3e-79  Click
47 complement(2439816..2440586)  PHAGE_Lister_A006: gp36; lin2418; phage(gi157325452)  3e-103  Click
48 complement(2440885..2441046)  hypothetical protein; lin2419  N/A  Click
49 complement(2441046..2441312)  PHAGE_Lister_A006: gp33; lin2420; phage(gi157325449)  8e-25  Click
50 complement(2441522..2441773)  PHAGE_Lister_A006: gp32; lin2421; phage(gi157325448)  6e-41  Click
51 2441922..2442404  PHAGE_Lister_A006: gp31; lin2422; phage(gi157325447)  1e-35  Click
52 2442784..2443002  PHAGE_Lister_A118: gp34; lin2423; phage(gi16798817)  1e-30  Click
53 2443018..2443740  PHAGE_Lister_A118: gp33; lin2424; phage(gi16798816)  2e-133  Click
54 2443759..2443770  attR    AAATGAAAAAAG  N/A  Click
55 2443761..2444468  hypothetical protein; lin2425  N/A  Click
56 2444533..2445891  PHAGE_Lister_A118: putative integrase; lin2426; phage(gi16798814)  0.0  Click
57 2445882..2446349  competence transcription factor (C-terminal part); lin2427  N/A  Click
58 complement(2446397..2446744)  PHAGE_Bacill_phBC6A51: Transcriptional regulator; lin2428; phage(gi31415744)  5e-07  Click
Region 6, total : 52 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2580952..2580964  attL    TTTAAAATGTAAA  N/A  Click
2 2587880..2588086  PHAGE_Strept_M102: hypothetical protein M102_gp24; lin2561; phage(gi242345595)  1e-08  Click
3 complement(2588161..2589057)  PHAGE_Clostr_phiC2: putative abortive infection bacteriophage resistance protein ORF 37; lin2562; phage(gi134287370)  2e-40  Click
4 complement(2589420..2590370)  PHAGE_Lister_2389: Ply protein; lin2563; phage(gi17488524)  1e-63  Click
5 2590989..2591000  attL    AAATAAGCCTAT  N/A  Click
6 complement(2591144..2591485)  PHAGE_Lister_2389: Gp16 protein; lin2564; phage(gi17488519)  5e-48  Click
7 complement(2591482..2592603)  PHAGE_Lister_2389: Gp15 protein; lin2565; phage(gi17488518)  8e-177  Click
8 complement(2592600..2594741)  PHAGE_Lister_2389: Gp14 protein; lin2566; phage(gi17488517)  0.0  Click
9 complement(2594723..2595463)  PHAGE_Lister_2389: Gp13 protein; lin2567; phage(gi17488516)  2e-11  Click
10 complement(2595460..2598741)  PHAGE_Lister_2389: tail tape measure protein; lin2568; phage(gi17488515)  5e-68  Click
11 complement(2598756..2598890)  PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp28; lin2569; phage(gi115334638)  1e-06  Click
12 complement(2598965..2599321)  PHAGE_Bacill_1: hypothetical protein BV1_gp29; lin2570; phage(gi155042944)  2e-31  Click
13 complement(2599365..2599943)  PHAGE_Geobac_GBSV1: major tail protein; lin2571; phage(gi115334636)  3e-44  Click
14 complement(2599944..2600267)  PHAGE_Geobac_GBSV1: aminopeptidase; lin2572; phage(gi115334635)  2e-13  Click
15 complement(2600264..2600617)  PHAGE_Lactoc_bIL285: Orf48; lin2573; phage(gi13095728)  6e-20  Click
16 complement(2600624..2600929)  PHAGE_Bacill_1: hypothetical protein BV1_gp25; lin2574; phage(gi158348414)  1e-23  Click
17 complement(2600916..2601203)  PHAGE_Bacill_1: hypothetical protein BV1_gp23; lin2575; phage(gi155042938)  7e-26  Click
18 complement(2601387..2602574)  PHAGE_Staphy_StB20: major head protein; lin2576; phage(gi431809769)  1e-97  Click
19 complement(2602565..2603149)  PHAGE_Geobac_GBSV1: phage prohead; lin2577; phage(gi115334629)  4e-67  Click
20 complement(2603146..2604327)  PHAGE_Geobac_GBSV1: phage portal protein; lin2578; phage(gi115334628)  2e-132  Click
21 complement(2604341..2606092)  PHAGE_Bacill_1: Phage terminase; lin2579; phage(gi155042934)  0.0  Click
22 complement(2606089..2606463)  PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp16; lin2580; phage(gi115334626)  2e-19  Click
23 complement(2606504..2606878)  PHAGE_Strept_PH10: hypothetical protein PH10_gp30; lin2581; phage(gi238821347)  6e-28  Click
24 complement(2607196..2607939)  hypothetical protein; lin2582  N/A  Click
25 complement(2608037..2608462)  PHAGE_Lister_2389: Gp53 protein; lin2583; phage(gi17488558)  9e-55  Click
26 complement(2608475..2608702)  hypothetical protein; lin2584  N/A  Click
27 complement(2608919..2609563)  PHAGE_Lister_2389: Gp52 protein; lin2585; phage(gi17488557)  1e-58  Click
28 complement(2609566..2609880)  PHAGE_Lister_2389: Gp51 protein; lin2586; phage(gi17488556)  2e-51  Click
29 complement(2610169..2612442)  PHAGE_Lister_2389: primase; lin2587; phage(gi17488555)  0.0  Click
30 complement(2612465..2612947)  PHAGE_Lister_2389: Gp49 protein; lin2588; phage(gi17488554)  2e-83  Click
31 complement(2612970..2614226)  PHAGE_Lister_2389: helicase; lin2589; phage(gi17488553)  0.0  Click
32 complement(2614290..2614979)  PHAGE_Lister_2389: Gp47 protein; lin2590; phage(gi17488552)  3e-126  Click
33 complement(2614992..2615471)  PHAGE_Lister_2389: Gp46 protein; lin2591; phage(gi17488551)  2e-72  Click
34 complement(2615853..2616026)  PHAGE_Lister_2389: Gp44; lin2592; phage(gi17488549)  8e-25  Click
35 complement(2616023..2616361)  PHAGE_Lister_2389: Gp41 protein; lin2593; phage(gi17488546)  1e-25  Click
36 complement(2616494..2616715)  PHAGE_Entero_phiEF24C: hypothetical protein EFP_gp200; lin2594; phage(gi158079496)  6e-05  Click
37 complement(2616715..2616900)  PHAGE_Brocho_NF5: gp42; lin2595; phage(gi327197627)  2e-05  Click
38 complement(2617103..2617618)  PHAGE_Entero_phiEf11: conserved hypothetical protein; lin2596; phage(gi282598755)  8e-36  Click
39 complement(2617817..2618110)  PHAGE_Lister_B054: gp66; lin2597; phage(gi157325350)  1e-40  Click
40 complement(2618107..2618295)  hypothetical protein; lin2598  N/A  Click
41 complement(2618288..2618686)  hypothetical protein; lin2599  N/A  Click
42 complement(2618683..2619363)  PHAGE_Lister_B025: gp44; lin2600; phage(gi157325261)  1e-124  Click
43 complement(2619376..2620320)  PHAGE_Bacill_BCJA1c: integrase; lin2601; phage(gi56694872)  2e-51  Click
44 complement(2620331..2621044)  PHAGE_Lister_B025: gp42; lin2602; phage(gi157325259)  3e-135  Click
45 complement(2621065..2621352)  PHAGE_Lister_2389: Gp32 protein; lin2603; phage(gi17488537)  2e-12  Click
46 complement(2622064..2622306)  PHAGE_Lister_2389: Gp29 protein; lin2604; phage(gi17488534)  1e-41  Click
47 complement(2622328..2622519)  PHAGE_Lister_2389: Gp28 protein; lin2605; phage(gi17488533)  5e-23  Click
48 2622586..2622789  hypothetical protein; lin2606  N/A  Click
49 2623009..2623020  attR    AAATAAGCCTAT  N/A  Click
50 2623190..2623513  PHAGE_Lister_2389: Rep protein; lin2607; phage(gi17488532)  3e-39  Click
51 2623530..2623982  PHAGE_Lister_2389: Gp26 protein; lin2608; phage(gi17488531)  8e-65  Click
52 2624033..2624521  PHAGE_Lister_2389: Gp25 protein; lin2609; phage(gi17488530)  4e-06  Click
53 2624653..2625807  PHAGE_Lister_2389: integrase; lin2610; phage(gi17488529)  0.0  Click
54 complement(2625909..2625980)  tRNA  N/A  Click
55 complement(2626101..2627537)  PHAGE_Bacill_36: virion structural protein; lin2611; phage(gi156564148)  8e-12  Click
56 2627695..2628291  PHAGE_Strept_1: head maturation protease; lin2612; phage(gi28876177)  7e-14  Click
57 2629860..2629872  attR    TTTAAAATGTAAA  N/A  Click