Definition | Listeria innocua Clip11262, complete genome. |
---|---|
Accession | NC_003212 |
Length | 3,011,208 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 64 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 73144..74196 | PHAGE_Acanth_mimivirus: probable methylated-DNA--protein-cysteine methyltransferase; lin0068; phage(gi311978100) | 4e-19 | Click |
2 | complement(74218..74856) | PHAGE_Staphy_SA11: hypothetical protein; lin0069; phage(gi422935622) | 6e-06 | Click |
3 | 74988..75944 | PHAGE_Parame_1: hypothetical protein; lin0070; phage(gi9631622) | 8e-34 | Click |
4 | 76030..76102 | tRNA | N/A | Click |
5 | 76060..76107 | attL ACTCTTAATCAGCGGGTCGGGGGTTCGAAACCCTCACAACCCATATAT | N/A | Click |
6 | complement(76209..77411) | PHAGE_Lister_A500: Int; lin0071; phage(gi157324990) | 0.0 | Click |
7 | complement(77476..78126) | hypothetical protein; lin0072 | N/A | Click |
8 | complement(78505..78981) | PHAGE_Lister_A500: gp33; lin0073; phage(gi157324992) | 4e-43 | Click |
9 | 79378..79644 | PHAGE_Lister_A118: gp37; lin0074; phage(gi16798821) | 3e-43 | Click |
10 | complement(79573..79803) | PHAGE_Lister_A118: gp37-1; lin0075; phage(gi16798822) | 2e-38 | Click |
11 | 79869..80063 | hypothetical protein; lin0076 | N/A | Click |
12 | 80075..80311 | PHAGE_Lister_A500: gp35; lin0077; phage(gi157324994) | 5e-11 | Click |
13 | 80308..80589 | PHAGE_Lister_A118: gp41; lin0078; phage(gi16798827) | 7e-40 | Click |
14 | complement(80775..81017) | hypothetical protein; lin0079 | N/A | Click |
15 | 81081..81854 | PHAGE_Lister_A006: gp36; lin0080; phage(gi157325452) | 3e-142 | Click |
16 | 81973..82497 | PHAGE_Lister_A500: gp38; lin0081; phage(gi157324997) | 1e-86 | Click |
17 | 82504..82689 | PHAGE_Lister_A500: gp39; lin0082; phage(gi157324998) | 2e-28 | Click |
18 | 82705..82893 | PHAGE_Lister_A006: gp39; lin0083; phage(gi157325455) | 2e-30 | Click |
19 | 83126..84085 | PHAGE_Lister_A006: gp41; lin0084; phage(gi157325458) | 1e-178 | Click |
20 | 84085..84900 | PHAGE_Lister_A006: gp42; lin0085; phage(gi157325459) | 2e-152 | Click |
21 | 84921..85832 | PHAGE_Lister_A500: gp45; lin0086; phage(gi157325004) | 6e-68 | Click |
22 | 85829..85996 | PHAGE_Lister_A500: gp46; lin0087; phage(gi157325005) | 4e-22 | Click |
23 | 86290..87102 | PHAGE_Lister_2389: methylase; lin0088; phage(gi17488539) | 8e-154 | Click |
24 | 87099..87728 | PHAGE_Lister_A500: gp49; lin0089; phage(gi157325008) | 2e-15 | Click |
25 | 87725..88246 | PHAGE_Lister_A500: gp52; lin0090; phage(gi157325010) | 7e-33 | Click |
26 | 88373..88765 | PHAGE_Staphy_phi13: possible sensor protein; lin0091; phage(gi29028688) | 3e-07 | Click |
27 | 88762..88947 | PHAGE_Lister_vB_LmoM_AG20: hypothetical protein; lin0092; phage(gi472437273) | 3e-26 | Click |
28 | 88944..89234 | PHAGE_Lister_2389: Gp37 protein; lin0093; phage(gi17488542) | 1e-46 | Click |
29 | 89231..89437 | PHAGE_Lister_B025: gp47; lin0094; phage(gi157325264) | 8e-30 | Click |
30 | 89438..89839 | PHAGE_Lister_A118: gp59; lin0095; phage(gi16798846) | 5e-47 | Click |
31 | 89836..90336 | hypothetical protein; lin0096 | N/A | Click |
32 | 90333..90812 | PHAGE_Lister_A500: gp56; lin0097; phage(gi157325015) | 8e-80 | Click |
33 | 90831..91013 | PHAGE_Lister_A500: gp57; lin0098; phage(gi157325016) | 1e-20 | Click |
34 | 90958..91362 | PHAGE_Lister_A500: gp58; lin0099; phage(gi157325017) | 1e-64 | Click |
35 | 91366..91749 | PHAGE_Lister_A500: gp59; lin0100; phage(gi157325018) | 5e-62 | Click |
36 | 91890..92324 | PHAGE_Lister_A500: gp62; lin0101; phage(gi157325021) | 2e-74 | Click |
37 | 92534..92710 | hypothetical protein; lin0102 | N/A | Click |
38 | 92769..93032 | PHAGE_Lactob_LP65: hypothetical protein LP65_gp078; lin0103; phage(gi56693126) | 8e-28 | Click |
39 | 93090..93632 | PHAGE_Lister_A500: TerS; lin0104; phage(gi157324961) | 4e-95 | Click |
40 | 93601..94932 | PHAGE_Lister_A500: TerL; lin0105; phage(gi157324962) | 0.0 | Click |
41 | 94945..96714 | PHAGE_Lister_A500: gp3; lin0106; phage(gi157324963) | 0.0 | Click |
42 | 96715..97854 | PHAGE_Lister_A500: gp4; lin0107; phage(gi157324964) | 0.0 | Click |
43 | 97933..98502 | PHAGE_Lister_A500: gp5; lin0108; phage(gi157324965) | 2e-56 | Click |
44 | 98526..99425 | PHAGE_Lister_A118: major capsid protein; lin0109; phage(gi16798789) | 2e-159 | Click |
45 | 99425..99583 | PHAGE_Lister_A500: gp7; lin0110; phage(gi157324967) | 9e-19 | Click |
46 | 99585..99980 | PHAGE_Lister_A500: gp8; lin0111; phage(gi157324968) | 2e-69 | Click |
47 | 99980..100342 | PHAGE_Lister_A500: gp9; lin0112; phage(gi157324969) | 2e-66 | Click |
48 | 100342..100680 | PHAGE_Lister_A500: gp10; lin0113; phage(gi157324970) | 3e-60 | Click |
49 | 100680..101087 | PHAGE_Lister_A500: gp11; lin0114; phage(gi157324971) | 2e-70 | Click |
50 | 101090..101527 | PHAGE_Lister_A500: Tsh; lin0115; phage(gi157324972) | 4e-81 | Click |
51 | 101842..102264 | PHAGE_Lister_A500: gp14; lin0117; phage(gi157324974) | 3e-76 | Click |
52 | 102270..102872 | PHAGE_Lister_A500: gp15; lin0118; phage(gi157324976) | 6e-112 | Click |
53 | 102883..108249 | PHAGE_Lister_A500: Tmp; lin0119; phage(gi157324975) | 0.0 | Click |
54 | 108246..109073 | PHAGE_Lister_A500: gp17; lin0120; phage(gi157324977) | 6e-162 | Click |
55 | 109073..110110 | PHAGE_Lister_A500: gp18; lin0121; phage(gi157324978) | 0.0 | Click |
56 | 110111..111136 | PHAGE_Lister_A500: gp19; lin0122; phage(gi157324979) | 0.0 | Click |
57 | 111133..112200 | PHAGE_Lister_A500: gp20; lin0123; phage(gi157324980) | 0.0 | Click |
58 | 112197..112538 | PHAGE_Lister_A500: gp21; lin0124; phage(gi157324981) | 1e-59 | Click |
59 | 112539..112685 | PHAGE_Lister_A500: gp22; lin0125; phage(gi157324982) | 8e-22 | Click |
60 | 112722..113087 | PHAGE_Lister_A500: gp23; lin0126; phage(gi157324983) | 4e-63 | Click |
61 | 113100..113381 | PHAGE_Lister_A500: Hol; lin0127; phage(gi157324984) | 3e-47 | Click |
62 | 113381..114250 | PHAGE_Lister_A500: PlyA500; lin0128; phage(gi157324985) | 2e-170 | Click |
63 | 114275..114691 | PHAGE_Lister_B025: gp26; lin0129; phage(gi157325243) | 5e-29 | Click |
64 | 115501..115548 | attR ACTCTTAATCAGCGGGTCGGGGGTTCGAAACCCTCACAACCCATATAT | N/A | Click |
65 | 115716..116072 | hypothetical protein; lin0130 | N/A | Click |
66 | 116483..117142 | hypothetical protein; lin0131 | N/A | Click |
67 | 117256..123096 | PHAGE_Megavi_lba: hypothetical protein; lin0132; phage(gi448825518) | 2e-06 | Click |
Region 2, total : 24 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(151526..153268) | PHAGE_Bacill_SPBc2: ABC transporter; lin0156; phage(gi9630145) | 4e-30 | Click |
2 | 153411..154244 | hypothetical protein; lin0157 | N/A | Click |
3 | 154394..155092 | hypothetical protein; lin0158 | N/A | Click |
4 | complement(155062..155757) | hypothetical protein; lin0159 | N/A | Click |
5 | complement(155931..156383) | PHAGE_Lister_A118: gp35; lin0160; phage(gi16798818) | 2e-29 | Click |
6 | complement(156389..156742) | PHAGE_Staphy_92: ORF019; lin0161; phage(gi66396425) | 3e-15 | Click |
7 | 156943..157371 | PHAGE_Lister_A118: gp61; lin0162; phage(gi16798848) | 1e-17 | Click |
8 | 157383..157799 | PHAGE_Lister_A118: gp66; lin0163; phage(gi16798853) | 3e-22 | Click |
9 | 158079..158468 | antigen B; lin0164 | N/A | Click |
10 | 158481..158993 | PHAGE_Clostr_phi8074_B1: putative phage major tail protein; lin0165; phage(gi431810369) | 1e-18 | Click |
11 | 159041..159343 | PHAGE_Strept_5: hypothetical protein SpyM3_1315; lin0166; phage(gi28876397) | 2e-08 | Click |
12 | 159454..159789 | PHAGE_Strept_5: hypothetical protein SpyM3_1314; lin0167; phage(gi28876396) | 1e-19 | Click |
13 | 159776..161644 | PHAGE_Propio_P100_A: putative tape measure; lin0168; phage(gi410491193) | 3e-46 | Click |
14 | 161641..162459 | PHAGE_Lister_A118: gp17; lin0169; phage(gi16798800) | 3e-43 | Click |
15 | 162469..163605 | PHAGE_Lister_A118: gp18; lin0170; phage(gi16798801) | 4e-50 | Click |
16 | 163595..163894 | hypothetical protein; lin0171 | N/A | Click |
17 | 163909..164484 | hypothetical protein; lin0172 | N/A | Click |
18 | 164499..164978 | PHAGE_Deep_s_D6E: tail fiber protein; lin0173; phage(gi423262345) | 5e-06 | Click |
19 | 164975..165511 | PHAGE_Lister_A118: gp20; lin0174; phage(gi16798803) | 4e-06 | Click |
20 | 165530..165952 | PHAGE_Bacill_WBeta: phage holin; lin0175; phage(gi85701395) | 6e-32 | Click |
21 | 165933..166661 | PHAGE_Bacill_SPP1: hypothetical protein SPP1p051; lin0176; phage(gi22855096) | 1e-38 | Click |
22 | complement(166696..169053) | PROPHAGE_Pseudo_PAO1: coat protein A of bacteriophage Pf1; lin0177; phage(gi15595921) | 5e-06 | Click |
23 | 169241..169990 | hypothetical protein; lin0178 | N/A | Click |
24 | complement(170062..171570) | PHAGE_Staphy_42E: ORF012; lin0179; phage(gi66395520) | 3e-18 | Click |
Region 3, total : 73 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | complement(1245851..1246246) | PHAGE_Lister_B054: gp41; lin1230; phage(gi157325325) | 5e-13 | Click |
2 | 1246499..1246510 | attL AAGTACACATCA | N/A | Click |
3 | complement(1246563..1247978) | PHAGE_Bacill_phi105: site-specific recombinase for integration and excision; lin1231; phage(gi22855025) | 6e-111 | Click |
4 | complement(1248055..1248726) | hypothetical protein; lin1232 | N/A | Click |
5 | complement(1248769..1249188) | PHAGE_Lister_B054: gp40; lin1233; phage(gi157325324) | 2e-66 | Click |
6 | complement(1249205..1249633) | PHAGE_Lister_B054: gp41; lin1234; phage(gi157325325) | 1e-72 | Click |
7 | 1249793..1249978 | PHAGE_Lister_B054: gp42; lin1235; phage(gi157325326) | 1e-27 | Click |
8 | 1250055..1250579 | PHAGE_Lister_B054: gp43; lin1236; phage(gi157325327) | 1e-78 | Click |
9 | 1250592..1250750 | hypothetical protein; lin1237 | N/A | Click |
10 | 1250744..1250908 | PHAGE_Lister_B054: gp45; lin1238; phage(gi157325329) | 9e-13 | Click |
11 | 1251058..1251342 | PHAGE_Lister_B054: gp46; lin1239; phage(gi157325330) | 8e-28 | Click |
12 | 1251765..1252106 | PHAGE_Lister_B054: gp48; lin1240; phage(gi157325332) | 2e-59 | Click |
13 | 1252093..1254033 | PHAGE_Lister_B054: gp49; lin1241; phage(gi157325333) | 0.0 | Click |
14 | 1254035..1254046 | attL AAATGGCAAAAG | N/A | Click |
15 | 1254037..1254819 | PHAGE_Lister_B054: gp50; lin1242; phage(gi157325334) | 3e-139 | Click |
16 | 1254758..1255516 | PHAGE_Lister_B054: gp51; lin1243; phage(gi157325335) | 4e-130 | Click |
17 | 1255528..1256445 | PHAGE_Lister_B054: gp52; lin1244; phage(gi157325336) | 2e-171 | Click |
18 | 1256321..1257184 | PHAGE_Lister_B054: gp53; lin1245; phage(gi157325337) | 1e-149 | Click |
19 | 1257362..1257589 | PHAGE_Lister_B054: gp55; lin1246; phage(gi157325339) | 1e-29 | Click |
20 | 1257546..1257785 | PHAGE_Lister_B054: gp56; lin1247; phage(gi157325340) | 5e-33 | Click |
21 | 1257766..1258203 | PHAGE_Lister_B054: gp57; lin1248; phage(gi157325341) | 3e-76 | Click |
22 | 1258225..1258845 | PHAGE_Lister_B054: gp58; lin1249; phage(gi157325342) | 1e-104 | Click |
23 | 1258886..1259263 | PHAGE_Lister_B054: gp59; lin1250; phage(gi157325343) | 1e-58 | Click |
24 | 1259223..1259399 | PHAGE_Lister_B054: gp60; lin1251; phage(gi157325344) | 2e-24 | Click |
25 | 1259411..1259833 | PHAGE_Lister_B054: gp61; lin1252; phage(gi157325345) | 3e-67 | Click |
26 | 1259830..1261191 | PHAGE_Lister_B054: gp62; lin1253; phage(gi157325346) | 0.0 | Click |
27 | 1261428..1262372 | PHAGE_Lister_B054: gp64; lin1254; phage(gi157325348) | 0.0 | Click |
28 | 1262385..1263065 | PHAGE_Lister_B054: gp65; lin1255; phage(gi157325349) | 2e-128 | Click |
29 | 1263062..1263355 | PHAGE_Lister_B054: gp66; lin1256; phage(gi157325350) | 3e-50 | Click |
30 | complement(1263766..1264293) | hypothetical protein; lin1257 | N/A | Click |
31 | 1264368..1264922 | PHAGE_Lister_B054: gp70; lin1258; phage(gi157325353) | 2e-98 | Click |
32 | 1265000..1265425 | PHAGE_Lister_B054: gp71; lin1259; phage(gi157325354) | 2e-74 | Click |
33 | 1265438..1266205 | PHAGE_Lister_B054: gp72; lin1260; phage(gi157325355) | 8e-142 | Click |
34 | 1266855..1267334 | hypothetical protein; lin1261 | N/A | Click |
35 | 1267399..1268736 | PHAGE_Lister_B054: gp77; lin1262; phage(gi157325361) | 0.0 | Click |
36 | 1268784..1268981 | PHAGE_Lister_B054: gp78; lin1263; phage(gi157325362) | 1e-30 | Click |
37 | 1269111..1269341 | PHAGE_Lister_B054: gp79; lin1264; phage(gi157325363) | 1e-32 | Click |
38 | 1269369..1269593 | PHAGE_Lister_B054: gp80; lin1265; phage(gi157325364) | 4e-38 | Click |
39 | 1269646..1270482 | PHAGE_Lister_B054: TerS; lin1266; phage(gi157325285) | 8e-34 | Click |
40 | 1270469..1271803 | PHAGE_Bacill_PM1: hypothetical protein; lin1267; phage(gi472438300) | 1e-134 | Click |
41 | 1271793..1273367 | PHAGE_Vibrio_SIO_2: capsid portal protein; lin1268; phage(gi371496385) | 4e-36 | Click |
42 | 1273354..1275102 | PHAGE_Plankt_PaV_LD: virion structural protein; lin1269; phage(gi371496206) | 3e-09 | Click |
43 | 1275480..1276574 | PHAGE_Methan_psiM100: putative structural protein; lin1270; phage(gi11863104) | 8e-17 | Click |
44 | 1276590..1277519 | PHAGE_Natria_PhiCh1: capsid protein gpE; lin1271; phage(gi22091115) | 3e-14 | Click |
45 | 1277525..1277737 | hypothetical protein; lin1272 | N/A | Click |
46 | 1277749..1278153 | hypothetical protein; lin1273 | N/A | Click |
47 | 1278155..1278514 | hypothetical protein; lin1274 | N/A | Click |
48 | 1278514..1279020 | hypothetical protein; lin1275 | N/A | Click |
49 | 1279030..1279509 | hypothetical protein; lin1276 | N/A | Click |
50 | 1279502..1279738 | hypothetical protein; lin1277 | N/A | Click |
51 | 1279740..1281098 | PHAGE_Strept_1: sheath tail protein; lin1278; phage(gi39653727) | 4e-80 | Click |
52 | 1281100..1281546 | PHAGE_Strept_1: core tail protein; lin1279; phage(gi39653728) | 1e-25 | Click |
53 | 1281621..1282109 | PHAGE_Clostr_phiC2: hypothetical protein phiC2p16; lin1280; phage(gi134287351) | 1e-11 | Click |
54 | 1282298..1286263 | PHAGE_Clostr_phiMMP04: tail tape measure; lin1282; phage(gi414090455) | 8e-26 | Click |
55 | 1286256..1286939 | PHAGE_Clostr_phiMMP04: peptidoglycan-binding lysin domain protein; lin1283; phage(gi414090456) | 1e-24 | Click |
56 | 1286950..1287927 | PHAGE_Clostr_phiC2: putative hydrolase; lin1284; phage(gi134287357) | 2e-28 | Click |
57 | 1287927..1288181 | hypothetical protein; lin1285 | N/A | Click |
58 | 1288196..1288603 | PHAGE_Strept_1: hypothetical protein EJ-1p60; lin1286; phage(gi39653734) | 5e-10 | Click |
59 | 1288604..1289689 | PHAGE_Strept_1: tail protein; lin1287; phage(gi39653735) | 2e-41 | Click |
60 | 1289700..1290269 | PHAGE_Clostr_CD119: hypothetical protein CDBPCV119_gp28; lin1288; phage(gi90592664) | 2e-07 | Click |
61 | 1290266..1290535 | hypothetical protein; lin1289 | N/A | Click |
62 | 1290537..1291358 | PHAGE_Lister_B054: gp26; lin1290; phage(gi157325310) | 2e-79 | Click |
63 | 1291364..1291705 | PHAGE_Lister_B054: gp27; lin1291; phage(gi157325311) | 3e-55 | Click |
64 | 1291735..1291860 | PHAGE_Lister_B054: gp28; lin1292; phage(gi157325312) | 3e-16 | Click |
65 | 1291891..1292337 | PHAGE_Lister_B054: gp29; lin1293; phage(gi157325313) | 6e-71 | Click |
66 | 1292313..1292759 | PHAGE_Lister_B054: gp30; lin1294; phage(gi157325314) | 1e-76 | Click |
67 | 1292853..1293116 | PHAGE_Lister_B054: Hol; lin1295; phage(gi157325316) | 3e-40 | Click |
68 | 1293117..1293128 | attR AAATGGCAAAAG | N/A | Click |
69 | 1293119..1293952 | PHAGE_Lister_B054: PlyB054; lin1296; phage(gi157325317) | 2e-19 | Click |
70 | complement(1294014..1294235) | PHAGE_Lister_B054: gp34; lin1297; phage(gi157325318) | 5e-35 | Click |
71 | complement(1294263..1294466) | PHAGE_Lister_B054: gp35; lin1298; phage(gi157325319) | 3e-33 | Click |
72 | complement(1294480..1294845) | PHAGE_Lister_B054: gp36; lin1299; phage(gi157325320) | 1e-62 | Click |
73 | 1295418..1296029 | hypothetical protein; lin1300 | N/A | Click |
74 | 1296051..1296416 | hypothetical protein; lin1301 | N/A | Click |
75 | 1296787..1297008 | PHAGE_Lister_A006: gp27; lin1302; phage(gi157325442) | 1e-24 | Click |
76 | 1297054..1297065 | attR AAGTACACATCA | N/A | Click |
77 | 1297270..1297803 | PHAGE_Xestia_granulovirus: ORF40; lin1303; phage(gi9635290) | 5e-05 | Click |
Region 4, total : 72 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1710189..1710200 | attL ATTTCATTTGAA | N/A | Click |
2 | 1711514..1711525 | attL ATATTAGTTAAT | N/A | Click |
3 | 1713958..1714335 | PHAGE_Lister_A118: gp30; lin1697; phage(gi16798813) | 1e-67 | Click |
4 | 1714369..1714719 | PHAGE_Lister_A118: gp29; lin1698; phage(gi16798812) | 9e-59 | Click |
5 | 1714724..1715173 | PHAGE_Lister_A006: gp23; lin1699; phage(gi157325438) | 2e-68 | Click |
6 | complement(1715216..1716142) | PHAGE_Lister_B054: PlyB054; lin1700; phage(gi157325317) | 2e-60 | Click |
7 | complement(1716145..1716378) | hypothetical protein; lin1701 | N/A | Click |
8 | complement(1716378..1716638) | PHAGE_Lister_2389: holin; lin1702; phage(gi17488523) | 5e-37 | Click |
9 | complement(1716649..1716864) | PHAGE_Lister_B054: gp31; lin1703; phage(gi157325315) | 4e-28 | Click |
10 | complement(1716883..1717329) | PHAGE_Lister_B054: gp30; lin1704; phage(gi157325314) | 1e-74 | Click |
11 | complement(1717305..1717751) | PHAGE_Lister_B054: gp29; lin1705; phage(gi157325313) | 5e-72 | Click |
12 | complement(1717783..1717908) | PHAGE_Lister_B054: gp28; lin1706; phage(gi157325312) | 3e-16 | Click |
13 | complement(1717938..1718279) | PHAGE_Lister_B054: gp27; lin1707; phage(gi157325311) | 2e-52 | Click |
14 | complement(1718285..1719013) | PHAGE_Lister_B054: gp26; lin1708; phage(gi157325310) | 9e-140 | Click |
15 | complement(1719034..1719675) | PHAGE_Lister_B054: gp25; lin1709; phage(gi157325309) | 2e-116 | Click |
16 | complement(1719665..1720816) | PHAGE_Lister_B054: gp24; lin1710; phage(gi157325308) | 0.0 | Click |
17 | complement(1720809..1721171) | PHAGE_Lister_B054: gp23; lin1711; phage(gi157325307) | 1e-61 | Click |
18 | complement(1721168..1721506) | PHAGE_Lister_B054: gp22; lin1712; phage(gi157325306) | 3e-59 | Click |
19 | complement(1721507..1722313) | PHAGE_Lister_B054: gp21; lin1713; phage(gi157325305) | 3e-150 | Click |
20 | complement(1722313..1722678) | PHAGE_Lister_B054: gp20; lin1714; phage(gi157325304) | 6e-65 | Click |
21 | complement(1722678..1723241) | PHAGE_Lister_B054: gp19; lin1715; phage(gi157325303) | 1e-106 | Click |
22 | complement(1723247..1727962) | PHAGE_Lister_B054: Tmp; lin1716; phage(gi157325302) | 0.0 | Click |
23 | complement(1727964..1728176) | PHAGE_Lister_B054: gp17; lin1717; phage(gi157325301) | 4e-34 | Click |
24 | complement(1728139..1728495) | PHAGE_Lister_B054: gp16; lin1718; phage(gi157325300) | 2e-63 | Click |
25 | complement(1728548..1728946) | PHAGE_Lister_B054: gp15; lin1719; phage(gi157325299) | 3e-71 | Click |
26 | complement(1728963..1729958) | PHAGE_Lister_B054: gp14; lin1720; phage(gi157325298) | 0.0 | Click |
27 | complement(1729963..1730451) | PHAGE_Lister_B054: gp13; lin1721; phage(gi157325297) | 1e-88 | Click |
28 | complement(1730441..1730815) | PHAGE_Lister_B054: gp12; lin1722; phage(gi157325296) | 3e-67 | Click |
29 | complement(1730815..1731414) | PHAGE_Lister_B054: gp11; lin1723; phage(gi157325295) | 1e-111 | Click |
30 | complement(1731414..1731749) | PHAGE_Lister_B054: gp10; lin1724; phage(gi157325294) | 1e-56 | Click |
31 | complement(1731761..1732147) | PHAGE_Lister_B054: gp9; lin1725; phage(gi157325293) | 1e-67 | Click |
32 | complement(1732170..1733075) | PHAGE_Lister_B054: gp8; lin1726; phage(gi157325292) | 2e-166 | Click |
33 | complement(1733096..1733545) | PHAGE_Lister_B054: gp7; lin1727; phage(gi157325291) | 3e-79 | Click |
34 | complement(1733545..1734654) | PHAGE_Lister_B054: gp6; lin1728; phage(gi157325290) | 0.0 | Click |
35 | complement(1734703..1734873) | PHAGE_Lister_B054: gp5; lin1729; phage(gi157325289) | 2e-28 | Click |
36 | complement(1734870..1736279) | PHAGE_Lister_B054: gp4; lin1730; phage(gi157325288) | 0.0 | Click |
37 | complement(1736272..1737657) | PHAGE_Lister_B054: gp3; lin1731; phage(gi157325287) | 0.0 | Click |
38 | complement(1737671..1739131) | PHAGE_Lister_B054: TerL; lin1732; phage(gi157325286) | 0.0 | Click |
39 | complement(1739109..1739993) | PHAGE_Lister_B054: TerS; lin1733; phage(gi157325285) | 7e-164 | Click |
40 | complement(1740039..1740263) | PHAGE_Lister_B054: gp80; lin1734; phage(gi157325364) | 4e-38 | Click |
41 | complement(1740291..1740521) | PHAGE_Lister_B054: gp79; lin1735; phage(gi157325363) | 7e-37 | Click |
42 | complement(1740652..1740849) | PHAGE_Lister_B054: gp78; lin1736; phage(gi157325362) | 6e-31 | Click |
43 | complement(1740897..1742234) | PHAGE_Lister_B054: gp77; lin1737; phage(gi157325361) | 0.0 | Click |
44 | complement(1743052..1743819) | PHAGE_Lister_B054: gp72; lin1738; phage(gi157325355) | 2e-142 | Click |
45 | complement(1743832..1744257) | PHAGE_Lister_B054: gp71; lin1739; phage(gi157325354) | 2e-74 | Click |
46 | complement(1744335..1744895) | PHAGE_Lister_B054: gp70; lin1740; phage(gi157325353) | 5e-105 | Click |
47 | complement(1744907..1745158) | PHAGE_Lister_B054: gp69; lin1741; phage(gi157325352) | 5e-44 | Click |
48 | complement(1745742..1746422) | PHAGE_Lister_B054: gp65; lin1742; phage(gi157325349) | 2e-128 | Click |
49 | complement(1746435..1747379) | PHAGE_Lister_B054: gp64; lin1743; phage(gi157325348) | 0.0 | Click |
50 | complement(1747616..1748977) | PHAGE_Lister_B054: gp62; lin1744; phage(gi157325346) | 0.0 | Click |
51 | complement(1748974..1749396) | PHAGE_Lister_B054: gp61; lin1745; phage(gi157325345) | 3e-67 | Click |
52 | complement(1749408..1749584) | PHAGE_Lister_B054: gp60; lin1746; phage(gi157325344) | 2e-24 | Click |
53 | complement(1749544..1749921) | PHAGE_Lister_B054: gp59; lin1747; phage(gi157325343) | 1e-58 | Click |
54 | complement(1749962..1750582) | PHAGE_Lister_B054: gp58; lin1748; phage(gi157325342) | 1e-104 | Click |
55 | complement(1750604..1751041) | PHAGE_Lister_B054: gp57; lin1749; phage(gi157325341) | 3e-76 | Click |
56 | complement(1751022..1751261) | PHAGE_Lister_B054: gp56; lin1750; phage(gi157325340) | 5e-33 | Click |
57 | complement(1751218..1751445) | PHAGE_Lister_B054: gp55; lin1751; phage(gi157325339) | 1e-29 | Click |
58 | complement(1751623..1752486) | PHAGE_Lister_B054: gp53; lin1752; phage(gi157325337) | 1e-149 | Click |
59 | complement(1752362..1753279) | PHAGE_Lister_B054: gp52; lin1753; phage(gi157325336) | 2e-171 | Click |
60 | complement(1753291..1754049) | PHAGE_Lister_B054: gp51; lin1754; phage(gi157325335) | 4e-130 | Click |
61 | complement(1753988..1754770) | PHAGE_Lister_B054: gp50; lin1755; phage(gi157325334) | 3e-139 | Click |
62 | complement(1754774..1756756) | PHAGE_Lister_B054: gp49; lin1756; phage(gi157325333) | 0.0 | Click |
63 | complement(1756701..1757042) | PHAGE_Lister_B054: gp48; lin1757; phage(gi157325332) | 2e-59 | Click |
64 | complement(1757060..1757287) | PHAGE_Lister_B054: gp47; lin1758; phage(gi157325331) | 1e-35 | Click |
65 | complement(1757465..1757755) | PHAGE_Lister_B054: gp46; lin1759; phage(gi157325330) | 2e-51 | Click |
66 | complement(1758382..1758906) | PHAGE_Lister_B054: gp43; lin1760; phage(gi157325327) | 2e-95 | Click |
67 | 1758971..1758982 | attR ATATTAGTTAAT | N/A | Click |
68 | complement(1758978..1759202) | PHAGE_Lactob_Lj771: cl repressor; lin1761; phage(gi163932156) | 2e-06 | Click |
69 | 1759363..1759803 | PHAGE_Lister_B054: gp41; lin1762; phage(gi157325325) | 4e-16 | Click |
70 | 1759826..1760248 | PHAGE_Lister_B054: gp40; lin1763; phage(gi157325324) | 5e-16 | Click |
71 | 1760284..1760832 | hypothetical protein; lin1764 | N/A | Click |
72 | 1760914..1762089 | PHAGE_Lister_B054: gp38; lin1765; phage(gi157325322) | 0.0 | Click |
73 | complement(1762250..1763134) | elongation factor Ts; lin1766 | N/A | Click |
74 | complement(1763214..1763963) | 30S ribosomal protein S2; lin1767 | N/A | Click |
75 | complement(1764158..1764535) | PHAGE_Lister_B054: gp71; lin1768; phage(gi157325354) | 8e-06 | Click |
76 | complement(1764667..1767078) | PHAGE_Acanth_moumouvirus: isoleucyl-tRNA synthetase; lin1769; phage(gi441432219) | 2e-12 | Click |
77 | 1767456..1767467 | attR ATTTCATTTGAA | N/A | Click |
Region 5, total : 56 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2406426..2406437 | attL AAATGAAAAAAG | N/A | Click |
2 | complement(2406902..2407135) | PHAGE_Lister_A006: gp26; lin2372; phage(gi157325441) | 3e-39 | Click |
3 | complement(2407382..2408278) | PHAGE_Clostr_phiC2: putative abortive infection bacteriophage resistance protein ORF 37; lin2373; phage(gi134287370) | 2e-40 | Click |
4 | complement(2408641..2409591) | PHAGE_Lister_A500: PlyA500; lin2374; phage(gi157324985) | 4e-72 | Click |
5 | complement(2409591..2409872) | PHAGE_Lister_A006: Hol; lin2375; phage(gi157325433) | 9e-48 | Click |
6 | complement(2409872..2410177) | PHAGE_Lister_A006: gp18; lin2376; phage(gi157325432) | 4e-50 | Click |
7 | complement(2410218..2410364) | PHAGE_Lister_2389: Gp17 protein; lin2377; phage(gi17488520) | 1e-20 | Click |
8 | complement(2410365..2410706) | PHAGE_Lister_A500: gp21; lin2378; phage(gi157324981) | 1e-59 | Click |
9 | complement(2410703..2411776) | PHAGE_Lister_A500: gp20; lin2379; phage(gi157324980) | 0.0 | Click |
10 | complement(2411773..2412801) | PHAGE_Lister_A500: gp19; lin2380; phage(gi157324979) | 1e-121 | Click |
11 | complement(2412798..2413811) | PHAGE_Lactob_phig1e: hypothetical protein phig1ep22; lin2381; phage(gi23455812) | 4e-51 | Click |
12 | complement(2413824..2414648) | PHAGE_Geobac_E2: hypothetical protein GBVE2_gp016; lin2382; phage(gi148747744) | 9e-43 | Click |
13 | complement(2414652..2419457) | PHAGE_Lister_A006: gp15; lin2383; phage(gi157325429) | 0.0 | Click |
14 | complement(2419770..2420201) | PHAGE_Lister_A006: gp13; lin2384; phage(gi157325427) | 9e-74 | Click |
15 | complement(2420251..2420937) | PHAGE_Lister_A006: Tsh; lin2385; phage(gi157325426) | 6e-116 | Click |
16 | complement(2420942..2421313) | PHAGE_Lister_A006: gp11; lin2386; phage(gi157325425) | 1e-64 | Click |
17 | complement(2421617..2421982) | PHAGE_Lister_A006: gp9; lin2387; phage(gi157325484) | 9e-64 | Click |
18 | complement(2421982..2422335) | PHAGE_Lister_A006: gp8; lin2388; phage(gi157325483) | 2e-62 | Click |
19 | complement(2422336..2422491) | PHAGE_Lister_A006: gp7; lin2389; phage(gi157325482) | 6e-12 | Click |
20 | complement(2422505..2423377) | PHAGE_Lister_A006: Cps; lin2390; phage(gi157325479) | 1e-146 | Click |
21 | complement(2423400..2423954) | PHAGE_Lister_A006: gp5; lin2391; phage(gi157325467) | 5e-99 | Click |
22 | complement(2424049..2425092) | PHAGE_Lister_A006: gp4; lin2392; phage(gi157325456) | 0.0 | Click |
23 | complement(2425097..2426653) | PHAGE_Lister_A006: gp3; lin2393; phage(gi157325445) | 0.0 | Click |
24 | complement(2426668..2427987) | PHAGE_Lister_A006: TerL; lin2394; phage(gi157325434) | 0.0 | Click |
25 | complement(2427980..2428720) | PHAGE_Lister_A006: TerS; lin2395; phage(gi157325423) | 4e-139 | Click |
26 | complement(2428760..2428987) | PHAGE_Lister_A006: gp62; lin2396; phage(gi157325481) | 1e-33 | Click |
27 | complement(2429269..2429841) | PHAGE_Staphy_SpaA1: sigma70, RNA polymerase sigma factor, positive control factor Xpf (C-terminal region); lin2397; phage(gi399498918) | 3e-11 | Click |
28 | complement(2429929..2430084) | hypothetical protein; lin2398 | N/A | Click |
29 | complement(2430125..2430508) | PHAGE_Lister_A500: gp59; lin2399; phage(gi157325018) | 9e-40 | Click |
30 | complement(2430512..2430916) | PHAGE_Lister_A500: gp58; lin2400; phage(gi157325017) | 2e-61 | Click |
31 | complement(2430861..2431043) | PHAGE_Lister_A500: gp57; lin2401; phage(gi157325016) | 9e-18 | Click |
32 | complement(2431065..2431547) | PHAGE_Lister_A006: gp53; lin2402; phage(gi157325471) | 2e-71 | Click |
33 | complement(2431924..2432103) | PHAGE_Lister_B025: gp50; lin2403; phage(gi157325267) | 3e-24 | Click |
34 | complement(2432100..2432270) | PHAGE_Lister_vB_LmoM_AG20: hypothetical protein; lin2404; phage(gi472437300) | 6e-10 | Click |
35 | complement(2432412..2432621) | hypothetical protein; lin2405 | N/A | Click |
36 | complement(2432836..2432982) | PHAGE_Lister_A006: gp46; lin2406; phage(gi157325463) | 6e-22 | Click |
37 | complement(2433490..2433720) | PHAGE_Lister_B025: gp44; lin2408; phage(gi157325261) | 8e-33 | Click |
38 | complement(2433733..2434677) | PHAGE_Bacill_BCJA1c: integrase; lin2409; phage(gi56694872) | 5e-51 | Click |
39 | complement(2434688..2435401) | PHAGE_Lister_B025: gp42; lin2410; phage(gi157325259) | 3e-135 | Click |
40 | complement(2435422..2435697) | PHAGE_Lister_A500: gp36; lin2411; phage(gi157324995) | 3e-15 | Click |
41 | complement(2435694..2436626) | PHAGE_Lister_A006: gp43; lin2412; phage(gi157325460) | 5e-179 | Click |
42 | complement(2436646..2437461) | PHAGE_Lister_A006: gp42; lin2413; phage(gi157325459) | 1e-153 | Click |
43 | complement(2437461..2438420) | PHAGE_Lister_A006: gp41; lin2414; phage(gi157325458) | 0.0 | Click |
44 | complement(2438652..2438840) | PHAGE_Lister_A006: gp39; lin2415; phage(gi157325455) | 5e-22 | Click |
45 | complement(2438948..2439163) | PHAGE_Lister_A118: gp44; lin2416; phage(gi16798831) | 1e-30 | Click |
46 | complement(2439160..2439693) | PHAGE_Lister_A006: gp37; lin2417; phage(gi157325453) | 3e-79 | Click |
47 | complement(2439816..2440586) | PHAGE_Lister_A006: gp36; lin2418; phage(gi157325452) | 3e-103 | Click |
48 | complement(2440885..2441046) | hypothetical protein; lin2419 | N/A | Click |
49 | complement(2441046..2441312) | PHAGE_Lister_A006: gp33; lin2420; phage(gi157325449) | 8e-25 | Click |
50 | complement(2441522..2441773) | PHAGE_Lister_A006: gp32; lin2421; phage(gi157325448) | 6e-41 | Click |
51 | 2441922..2442404 | PHAGE_Lister_A006: gp31; lin2422; phage(gi157325447) | 1e-35 | Click |
52 | 2442784..2443002 | PHAGE_Lister_A118: gp34; lin2423; phage(gi16798817) | 1e-30 | Click |
53 | 2443018..2443740 | PHAGE_Lister_A118: gp33; lin2424; phage(gi16798816) | 2e-133 | Click |
54 | 2443759..2443770 | attR AAATGAAAAAAG | N/A | Click |
55 | 2443761..2444468 | hypothetical protein; lin2425 | N/A | Click |
56 | 2444533..2445891 | PHAGE_Lister_A118: putative integrase; lin2426; phage(gi16798814) | 0.0 | Click |
57 | 2445882..2446349 | competence transcription factor (C-terminal part); lin2427 | N/A | Click |
58 | complement(2446397..2446744) | PHAGE_Bacill_phBC6A51: Transcriptional regulator; lin2428; phage(gi31415744) | 5e-07 | Click |
Region 6, total : 52 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2580952..2580964 | attL TTTAAAATGTAAA | N/A | Click |
2 | 2587880..2588086 | PHAGE_Strept_M102: hypothetical protein M102_gp24; lin2561; phage(gi242345595) | 1e-08 | Click |
3 | complement(2588161..2589057) | PHAGE_Clostr_phiC2: putative abortive infection bacteriophage resistance protein ORF 37; lin2562; phage(gi134287370) | 2e-40 | Click |
4 | complement(2589420..2590370) | PHAGE_Lister_2389: Ply protein; lin2563; phage(gi17488524) | 1e-63 | Click |
5 | 2590989..2591000 | attL AAATAAGCCTAT | N/A | Click |
6 | complement(2591144..2591485) | PHAGE_Lister_2389: Gp16 protein; lin2564; phage(gi17488519) | 5e-48 | Click |
7 | complement(2591482..2592603) | PHAGE_Lister_2389: Gp15 protein; lin2565; phage(gi17488518) | 8e-177 | Click |
8 | complement(2592600..2594741) | PHAGE_Lister_2389: Gp14 protein; lin2566; phage(gi17488517) | 0.0 | Click |
9 | complement(2594723..2595463) | PHAGE_Lister_2389: Gp13 protein; lin2567; phage(gi17488516) | 2e-11 | Click |
10 | complement(2595460..2598741) | PHAGE_Lister_2389: tail tape measure protein; lin2568; phage(gi17488515) | 5e-68 | Click |
11 | complement(2598756..2598890) | PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp28; lin2569; phage(gi115334638) | 1e-06 | Click |
12 | complement(2598965..2599321) | PHAGE_Bacill_1: hypothetical protein BV1_gp29; lin2570; phage(gi155042944) | 2e-31 | Click |
13 | complement(2599365..2599943) | PHAGE_Geobac_GBSV1: major tail protein; lin2571; phage(gi115334636) | 3e-44 | Click |
14 | complement(2599944..2600267) | PHAGE_Geobac_GBSV1: aminopeptidase; lin2572; phage(gi115334635) | 2e-13 | Click |
15 | complement(2600264..2600617) | PHAGE_Lactoc_bIL285: Orf48; lin2573; phage(gi13095728) | 6e-20 | Click |
16 | complement(2600624..2600929) | PHAGE_Bacill_1: hypothetical protein BV1_gp25; lin2574; phage(gi158348414) | 1e-23 | Click |
17 | complement(2600916..2601203) | PHAGE_Bacill_1: hypothetical protein BV1_gp23; lin2575; phage(gi155042938) | 7e-26 | Click |
18 | complement(2601387..2602574) | PHAGE_Staphy_StB20: major head protein; lin2576; phage(gi431809769) | 1e-97 | Click |
19 | complement(2602565..2603149) | PHAGE_Geobac_GBSV1: phage prohead; lin2577; phage(gi115334629) | 4e-67 | Click |
20 | complement(2603146..2604327) | PHAGE_Geobac_GBSV1: phage portal protein; lin2578; phage(gi115334628) | 2e-132 | Click |
21 | complement(2604341..2606092) | PHAGE_Bacill_1: Phage terminase; lin2579; phage(gi155042934) | 0.0 | Click |
22 | complement(2606089..2606463) | PHAGE_Geobac_GBSV1: hypothetical protein GPGV1_gp16; lin2580; phage(gi115334626) | 2e-19 | Click |
23 | complement(2606504..2606878) | PHAGE_Strept_PH10: hypothetical protein PH10_gp30; lin2581; phage(gi238821347) | 6e-28 | Click |
24 | complement(2607196..2607939) | hypothetical protein; lin2582 | N/A | Click |
25 | complement(2608037..2608462) | PHAGE_Lister_2389: Gp53 protein; lin2583; phage(gi17488558) | 9e-55 | Click |
26 | complement(2608475..2608702) | hypothetical protein; lin2584 | N/A | Click |
27 | complement(2608919..2609563) | PHAGE_Lister_2389: Gp52 protein; lin2585; phage(gi17488557) | 1e-58 | Click |
28 | complement(2609566..2609880) | PHAGE_Lister_2389: Gp51 protein; lin2586; phage(gi17488556) | 2e-51 | Click |
29 | complement(2610169..2612442) | PHAGE_Lister_2389: primase; lin2587; phage(gi17488555) | 0.0 | Click |
30 | complement(2612465..2612947) | PHAGE_Lister_2389: Gp49 protein; lin2588; phage(gi17488554) | 2e-83 | Click |
31 | complement(2612970..2614226) | PHAGE_Lister_2389: helicase; lin2589; phage(gi17488553) | 0.0 | Click |
32 | complement(2614290..2614979) | PHAGE_Lister_2389: Gp47 protein; lin2590; phage(gi17488552) | 3e-126 | Click |
33 | complement(2614992..2615471) | PHAGE_Lister_2389: Gp46 protein; lin2591; phage(gi17488551) | 2e-72 | Click |
34 | complement(2615853..2616026) | PHAGE_Lister_2389: Gp44; lin2592; phage(gi17488549) | 8e-25 | Click |
35 | complement(2616023..2616361) | PHAGE_Lister_2389: Gp41 protein; lin2593; phage(gi17488546) | 1e-25 | Click |
36 | complement(2616494..2616715) | PHAGE_Entero_phiEF24C: hypothetical protein EFP_gp200; lin2594; phage(gi158079496) | 6e-05 | Click |
37 | complement(2616715..2616900) | PHAGE_Brocho_NF5: gp42; lin2595; phage(gi327197627) | 2e-05 | Click |
38 | complement(2617103..2617618) | PHAGE_Entero_phiEf11: conserved hypothetical protein; lin2596; phage(gi282598755) | 8e-36 | Click |
39 | complement(2617817..2618110) | PHAGE_Lister_B054: gp66; lin2597; phage(gi157325350) | 1e-40 | Click |
40 | complement(2618107..2618295) | hypothetical protein; lin2598 | N/A | Click |
41 | complement(2618288..2618686) | hypothetical protein; lin2599 | N/A | Click |
42 | complement(2618683..2619363) | PHAGE_Lister_B025: gp44; lin2600; phage(gi157325261) | 1e-124 | Click |
43 | complement(2619376..2620320) | PHAGE_Bacill_BCJA1c: integrase; lin2601; phage(gi56694872) | 2e-51 | Click |
44 | complement(2620331..2621044) | PHAGE_Lister_B025: gp42; lin2602; phage(gi157325259) | 3e-135 | Click |
45 | complement(2621065..2621352) | PHAGE_Lister_2389: Gp32 protein; lin2603; phage(gi17488537) | 2e-12 | Click |
46 | complement(2622064..2622306) | PHAGE_Lister_2389: Gp29 protein; lin2604; phage(gi17488534) | 1e-41 | Click |
47 | complement(2622328..2622519) | PHAGE_Lister_2389: Gp28 protein; lin2605; phage(gi17488533) | 5e-23 | Click |
48 | 2622586..2622789 | hypothetical protein; lin2606 | N/A | Click |
49 | 2623009..2623020 | attR AAATAAGCCTAT | N/A | Click |
50 | 2623190..2623513 | PHAGE_Lister_2389: Rep protein; lin2607; phage(gi17488532) | 3e-39 | Click |
51 | 2623530..2623982 | PHAGE_Lister_2389: Gp26 protein; lin2608; phage(gi17488531) | 8e-65 | Click |
52 | 2624033..2624521 | PHAGE_Lister_2389: Gp25 protein; lin2609; phage(gi17488530) | 4e-06 | Click |
53 | 2624653..2625807 | PHAGE_Lister_2389: integrase; lin2610; phage(gi17488529) | 0.0 | Click |
54 | complement(2625909..2625980) | tRNA | N/A | Click |
55 | complement(2626101..2627537) | PHAGE_Bacill_36: virion structural protein; lin2611; phage(gi156564148) | 8e-12 | Click |
56 | 2627695..2628291 | PHAGE_Strept_1: head maturation protease; lin2612; phage(gi28876177) | 7e-14 | Click |
57 | 2629860..2629872 | attR TTTAAAATGTAAA | N/A | Click |