Definition Methylococcus capsulatus str. Bath chromosome, complete genome.
Accession NC_002977
Length 3,304,561
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 40 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2819640..2820023)  prophage LambdaMc01, site-specific recombinase resolvase family protein, truncation; MCA2633  N/A  Click
2 complement(2820020..2821399)  PHAGE_Deep_s_D6E: recombinase; MCA2634; phage(gi423262352)  4e-43  Click
3 complement(2821399..2821842)  hypothetical protein; MCA2635  N/A  Click
4 complement(2821842..2822105)  hypothetical protein; MCA2636  N/A  Click
5 complement(2822119..2824365)  hypothetical protein; MCA2637  N/A  Click
6 complement(2824384..2824956)  hypothetical protein; MCA2638  N/A  Click
7 complement(2824961..2825422)  hypothetical protein; MCA2639  N/A  Click
8 2825651..2825914  hypothetical protein; MCA2640  N/A  Click
9 2825925..2826404  hypothetical protein; MCA2641  N/A  Click
10 2826408..2827166  PHAGE_Xylell_Xfas53: Bro-N family protein; MCA2642; phage(gi273810427)  1e-72  Click
11 2827166..2827984  PHAGE_Salico_CGphi29: hypothetical protein; MCA2643; phage(gi472340162)  1e-11  Click
12 2827988..2828614  hypothetical protein; MCA2644  N/A  Click
13 2828676..2829149  hypothetical protein; MCA2645  N/A  Click
14 2829149..2829877  PHAGE_Burkho_BcepGomr: BcepGomrgp43; MCA2646; phage(gi146329955)  2e-23  Click
15 2829881..2830153  hypothetical protein; MCA2647  N/A  Click
16 2830150..2832417  PHAGE_Bacill_phi105: hypothetical protein phi105_42; MCA2648; phage(gi22855035)  7e-80  Click
17 2832553..2833029  PHAGE_Tetras_SI1: hypothetical protein; MCA2649; phage(gi472342269)  2e-06  Click
18 2833031..2833240  hypothetical protein; MCA2650  N/A  Click
19 2833233..2833649  hypothetical protein; MCA2651  N/A  Click
20 2833646..2833882  hypothetical protein; MCA2652  N/A  Click
21 2833879..2834214  hypothetical protein; MCA2653  N/A  Click
22 2834667..2836010  PHAGE_Psychr_pOW20_A: DNA methylase; MCA2654; phage(gi472339820)  6e-44  Click
23 2836007..2837272  PHAGE_Psychr_pOW20_A: DNA methylase; MCA2655; phage(gi472339820)  3e-76  Click
24 complement(2837239..2837829)  PHAGE_Pseudo_M6: hypothetical protein ORF049; MCA2656; phage(gi149408278)  3e-06  Click
25 2837940..2838476  hypothetical protein; MCA2657  N/A  Click
26 2838476..2840446  PHAGE_Stenot_S1: putative terminase large subunit; MCA2658; phage(gi213163902)  1e-82  Click
27 2840454..2840660  PHAGE_Stenot_S1: putative peptidase b; MCA2659; phage(gi213163904)  6e-07  Click
28 2840660..2842168  PHAGE_Stenot_S1: putative portal protein; MCA2660; phage(gi213163905)  2e-63  Click
29 2842178..2843404  PHAGE_Burkho_phiE125: putative capsid assembly protein/protease; MCA2661; phage(gi17975166)  3e-56  Click
30 2843406..2843783  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; MCA2662; phage(gi428782730)  2e-11  Click
31 2843786..2844802  PHAGE_Erwini_phiEa104: putative major capsid protein; MCA2663; phage(gi327198438)  1e-32  Click
32 2844799..2845101  hypothetical protein; MCA2664  N/A  Click
33 2845105..2845551  PHAGE_Synech_S_CBS1: hypothetical protein; MCA2665; phage(gi356870805)  1e-14  Click
34 2845558..2845758  hypothetical protein; MCA2666  N/A  Click
35 2845755..2846507  PHAGE_Pseudo_B3: hypothetical protein B3ORF43; MCA2667; phage(gi56692612)  2e-43  Click
36 2846521..2846916  hypothetical protein; MCA2668  N/A  Click
37 2847013..2847741  hypothetical protein; MCA2669  N/A  Click
38 2847759..2851790  PHAGE_Pseudo_MP22: putative tail component protein; MCA2670; phage(gi157835013)  9e-68  Click
39 2851834..2852208  PHAGE_Stenot_S1: hypothetical protein StPS1_gp18; MCA2671; phage(gi213163917)  1e-08  Click
40 2852211..2855795  PHAGE_Stenot_S1: putative tail protein b; MCA2672; phage(gi213163918)  3e-176  Click
Region 2, total : 58 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(3091049..3091846)  PHAGE_Burkho_KL3: gp28; MCA2900; phage(gi327198073)  2e-40  Click
2 complement(3092066..3092749)  PHAGE_Rhodoc_REQ1: hypothetical protein; MCA2901; phage(gi372450111)  2e-07  Click
3 complement(3092749..3093702)  PHAGE_Halovi_HSTV_2: hypothetical protein; MCA2902; phage(gi443404774)  7e-05  Click
4 complement(3093686..3093874)  hypothetical protein; MCA2903  N/A  Click
5 complement(3093885..3096056)  PHAGE_Staphy_vB_SauM_Romulus: tail protein; MCA2904; phage(gi472437810)  2e-07  Click
6 complement(3096072..3097382)  PHAGE_Burkho_phiE255: gp25, tail fiber; MCA2905; phage(gi134288819)  8e-16  Click
7 complement(3097383..3097865)  hypothetical protein; MCA2906  N/A  Click
8 complement(3097862..3098995)  PHAGE_Burkho_phiE255: gp24, conserved hypothetical protein; MCA2907; phage(gi134288837)  3e-86  Click
9 complement(3098992..3099378)  PHAGE_Burkho_phiE255: gp23; MCA2908; phage(gi134288814)  7e-24  Click
10 complement(3099375..3100853)  PHAGE_Aeromo_phiAS4: small distal tail fiber subunit; MCA2909; phage(gi310722234)  1e-11  Click
11 3099890..3099907  attL    CGACCTGGGCGGCGGTCG  N/A  Click
12 complement(3100853..3101449)  PHAGE_Burkho_phiE255: gp22; MCA2910; phage(gi134288817)  4e-15  Click
13 complement(3101469..3102512)  PHAGE_Burkho_phiE255: gp21; MCA2911; phage(gi134288840)  2e-64  Click
14 complement(3102509..3102754)  PHAGE_Burkho_phiE255: gp20, phage Tail Protein X; MCA2912; phage(gi134288808)  3e-18  Click
15 complement(3102751..3103320)  PHAGE_Burkho_phiE255: gp19; MCA2913; phage(gi134288789)  8e-22  Click
16 complement(3103485..3106466)  PHAGE_Burkho_phiE255: gp18; MCA2914; phage(gi134288800)  9e-125  Click
17 complement(3106837..3107142)  PHAGE_Burkho_phiE255: gp15; MCA2916; phage(gi134288838)  6e-10  Click
18 complement(3107185..3107532)  hypothetical protein; MCA2917  N/A  Click
19 complement(3107534..3108055)  PHAGE_Burkho_phiE255: gp14, phage major tail tube protein; MCA2918; phage(gi134288801)  2e-47  Click
20 complement(3108349..3109806)  PHAGE_Burkho_phiE255: gp13, phage tail sheath protein; MCA2919; phage(gi134288804)  8e-143  Click
21 complement(3109813..3110010)  PHAGE_Burkho_phiE255: gp12; MCA2920; phage(gi134288824)  1e-09  Click
22 complement(3110007..3110543)  PHAGE_Burkho_phiE255: gp11; MCA2921; phage(gi134288825)  1e-24  Click
23 complement(3110540..3110992)  PHAGE_Burkho_phiE255: gp10, conserved hypothetical protein; MCA2922; phage(gi134288797)  6e-26  Click
24 complement(3111002..3111991)  PHAGE_Pseudo_vB_PaeM_C2_10_Ab1: Major capsid protein; MCA2923; phage(gi431809985)  7e-25  Click
25 complement(3112000..3112374)  PHAGE_Vibrio_vB_VpaM_MAR: hypothetical protein; MCA2924; phage(gi428782730)  4e-09  Click
26 complement(3112387..3113472)  PHAGE_Burkho_phiE255: gp6; MCA2925; phage(gi134288810)  2e-62  Click
27 complement(3113769..3114242)  PHAGE_Pseudo_MP29: virion morphogenesis protein; MCA2926; phage(gi215480004)  8e-32  Click
28 complement(3114342..3116639)  PHAGE_Pseudo_MP42: head assembly cofactor; MCA2927; phage(gi399528609)  8e-65  Click
29 complement(3116636..3117397)  PHAGE_Rhodoc_REQ1: hypothetical protein; MCA2928; phage(gi372450096)  3e-25  Click
30 complement(3117401..3117895)  PHAGE_Synech_S_CBS2: triple helix repeat-containing collagen; MCA2929; phage(gi331027956)  1e-05  Click
31 complement(3117895..3119295)  PHAGE_Cyanop_PSS2: capsid decoration protein; MCA2930; phage(gi254729536)  1e-52  Click
32 complement(3119479..3119847)  hypothetical protein; MCA2931  N/A  Click
33 complement(3119840..3121330)  PHAGE_Burkho_phiE255: gp3; MCA2932; phage(gi134288841)  3e-135  Click
34 complement(3121327..3122658)  PHAGE_Burkho_phiE255: gp2; MCA2933; phage(gi134288795)  5e-18  Click
35 complement(3122655..3123218)  PHAGE_Burkho_phiE255: gp1; MCA2934; phage(gi134288828)  4e-17  Click
36 complement(3123218..3123514)  PHAGE_Escher_D108: hypothetical protein; MCA2935; phage(gi281199669)  2e-11  Click
37 complement(3123511..3123915)  hypothetical protein; MCA2936  N/A  Click
38 complement(3123887..3124162)  hypothetical protein; MCA2937  N/A  Click
39 complement(3124146..3124364)  hypothetical protein; MCA2938  N/A  Click
40 complement(3124364..3124657)  prophage MuMc02, lipoprotein; MCA2939  N/A  Click
41 complement(3124644..3125069)  PHAGE_Entero_phiV10: hypothetical structural protein; MCA2940; phage(gi89152439)  4e-29  Click
42 complement(3125302..3125616)  hypothetical protein; MCA2941  N/A  Click
43 complement(3125852..3126502)  PHAGE_Mannhe_phiMHaA1: hypothetical protein MhaA1p32; MCA2942; phage(gi109289967)  5e-09  Click
44 complement(3126502..3126852)  PHAGE_Burkho_phiE255: gp32, DNA-binding protein RdgB; MCA2943; phage(gi134288805)  1e-23  Click
45 complement(3126845..3127453)  hypothetical protein; MCA2944  N/A  Click
46 complement(3127653..3128084)  PHAGE_Pseudo_DMS3: hypothetical protein DMS3-18; MCA2946; phage(gi119953643)  1e-16  Click
47 complement(3128090..3128377)  PHAGE_Burkho_phiE255: gp35; MCA2947; phage(gi134288835)  5e-11  Click
48 complement(3128411..3128908)  PHAGE_Rhodob_RcapMu: host-nuclease inhibitor Gam; MCA2948; phage(gi356870857)  5e-12  Click
49 complement(3128917..3129078)  hypothetical protein; MCA2949  N/A  Click
50 complement(3129075..3129308)  hypothetical protein; MCA2950  N/A  Click
51 complement(3129305..3129640)  hypothetical protein; MCA2951  N/A  Click
52 complement(3129877..3130215)  PHAGE_Rhodob_RcapMu: LacI-like regulatory protein; MCA2952; phage(gi356870856)  1e-08  Click
53 complement(3130208..3130795)  PHAGE_Pseudo_DMS3: hypothetical protein DMS3-6; MCA2953; phage(gi119953631)  8e-21  Click
54 complement(3130795..3131466)  PHAGE_Pseudo_JBD24: hypothetical protein; MCA2954; phage(gi448245051)  1e-49  Click
55 complement(3131611..3133740)  PHAGE_Rhodov_RS1: integrase; MCA2955; phage(gi472342882)  9e-74  Click
56 complement(3134333..3134524)  hypothetical protein; MCA2956  N/A  Click
57 complement(3134616..3135056)  PHAGE_Pseudo_JBD88a: hypothetical protein; MCA2957; phage(gi448244689)  1e-11  Click
58 complement(3135157..3135489)  PHAGE_Burkho_phiE255: gp45, conserved hypothetical protein; MCA2958; phage(gi134288820)  1e-07  Click
59 3135799..3136380  PHAGE_Aeromo_phiO18P: putative cI repressor; MCA2959; phage(gi148727133)  8e-23  Click
60 3142838..3142855  attR    CGACCTGGGCGGCGGTCG  N/A  Click