Definition Staphylococcus epidermidis RP62A, complete genome.
Accession NC_002976
Length 2,616,530
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 101 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1557651..1557662  attL    CTTATTATTAAG  N/A  Click
2 1558216..1558228  attL    TTCGTAAATAGCA  N/A  Click
3 complement(1567768..1569306)  PHAGE_Bacill_SPBc2: site-specific recombinase; SERP1501; phage(gi9630126)  2e-51  Click
4 complement(1569296..1569877)  DNA-binding protein, putative; SERP1502  N/A  Click
5 complement(1569969..1570100)  hypothetical protein; SERP1503  N/A  Click
6 complement(1570079..1570684)  PHAGE_Clostr_c_st: hypothetical protein CST102; SERP1504; phage(gi80159788)  6e-16  Click
7 complement(1570656..1571051)  hypothetical protein; SERP1505  N/A  Click
8 complement(1571053..1571799)  hypothetical protein; SERP1506  N/A  Click
9 complement(1571812..1572051)  hypothetical protein; SERP1507  N/A  Click
10 complement(1572067..1572315)  PHAGE_Bacill_SPBc2: thioredoxin; SERP1508; phage(gi9630289)  8e-05  Click
11 complement(1572356..1572958)  PHAGE_Bacill_Finn: deoxynucleoside monophosphate kinase; SERP1509; phage(gi460042227)  7e-21  Click
12 complement(1572986..1574008)  PHAGE_Staphy_JD007: ribonucleoside-diphosphate beta subunit; SERP1510; phage(gi428783203)  2e-91  Click
13 complement(1574054..1574317)  PHAGE_Staphy_JD007: ribonucleoside-diphosphate alpha subunit; SERP1511; phage(gi428783204)  6e-23  Click
14 complement(1574601..1575425)  PHAGE_Staphy_vB_SauM_Romulus: HNH endonuclease family protein; SERP1512; phage(gi472437832)  2e-30  Click
15 complement(1575579..1578488)  PHAGE_Bacill_SPBc2: ribunucleotide reductase large subunit; SERP1513; phage(gi9630286)  0.0  Click
16 complement(1578510..1578956)  hypothetical protein; SERP1514  N/A  Click
17 complement(1578956..1579369)  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p160; SERP1515; phage(gi9630285)  4e-16  Click
18 complement(1579399..1579551)  hypothetical protein; SERP1516  N/A  Click
19 complement(1579570..1580271)  hypothetical protein; SERP1517  N/A  Click
20 complement(1580283..1580783)  PHAGE_Deep_s_D6E: gp157-like protein; SERP1518; phage(gi423262358)  1e-18  Click
21 complement(1580918..1581514)  PHAGE_Staphy_Twort: ORF061; SERP1519; phage(gi66391315)  1e-25  Click
22 complement(1581514..1581744)  hypothetical protein; SERP1520  N/A  Click
23 complement(1581758..1581940)  hypothetical protein; SERP1521  N/A  Click
24 complement(1581943..1582254)  hypothetical protein; SERP1522  N/A  Click
25 complement(1582329..1583336)  PHAGE_Bacill_SPBc2: modification methylase; SERP1523; phage(gi9630267)  5e-22  Click
26 complement(1583342..1584028)  PHAGE_Synech_S_CRM01: methyltransferase domain-containing protein; SERP1524; phage(gi333798309)  9e-31  Click
27 complement(1584018..1584209)  hypothetical protein; SERP1525  N/A  Click
28 complement(1584202..1584813)  PHAGE_Staphy_Twort: ORF060; SERP1526; phage(gi66391314)  5e-74  Click
29 complement(1584828..1585010)  hypothetical protein; SERP1527  N/A  Click
30 complement(1585010..1585261)  hypothetical protein; SERP1528  N/A  Click
31 complement(1585418..1585591)  hypothetical protein; SERP1529  N/A  Click
32 complement(1585572..1585859)  hypothetical protein; SERP1530  N/A  Click
33 complement(1585852..1586118)  hypothetical protein; SERP1531  N/A  Click
34 complement(1586130..1586303)  hypothetical protein; SERP1532  N/A  Click
35 complement(1586417..1586806)  hypothetical protein; SERP1533  N/A  Click
36 complement(1586894..1588192)  PHAGE_Bacill_SPO1: gp32.95; SERP1534; phage(gi209972981)  3e-38  Click
37 complement(1588202..1588516)  hypothetical protein; SERP1535  N/A  Click
38 complement(1588654..1589034)  hypothetical protein; SERP1536  N/A  Click
39 complement(1589146..1591632)  PHAGE_Bacill_SPBc2: putative DNA polymerase; SERP1537; phage(gi9630258)  0.0  Click
40 complement(1592095..1593543)  PHAGE_Bacill_SPBc2: putative DNA polymerase; SERP1538; phage(gi9630258)  6e-143  Click
41 complement(1593556..1593930)  hypothetical protein; SERP1539  N/A  Click
42 1594097..1594657  PHAGE_Vibrio_VP882: phage-related tail protein; SERP1540; phage(gi126010872)  2e-05  Click
43 1595010..1595414  hypothetical protein; SERP1541  N/A  Click
44 1595497..1595631  PHAGE_Mycoba_PegLeg: HNH endonuclease; SERP1542; phage(gi508177949)  6e-05  Click
45 complement(1595662..1596303)  PHAGE_Microm_12T: hypothetical protein; SERP1543; phage(gi472342674)  4e-05  Click
46 complement(1596409..1597131)  putative lipoprotein; SERP1544  N/A  Click
47 complement(1597240..1598040)  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p173; SERP1545; phage(gi9630298)  2e-31  Click
48 complement(1598044..1598538)  hypothetical protein; SERP1546  N/A  Click
49 complement(1598595..1598864)  PHAGE_Staphy_Twort: ORF141; SERP1547; phage(gi66391386)  3e-05  Click
50 complement(1598848..1599063)  hypothetical protein; SERP1548  N/A  Click
51 complement(1599342..1599737)  death-on-curing family protein; SERP1549  N/A  Click
52 complement(1599737..1599904)  hypothetical protein; SERP1550  N/A  Click
53 complement(1599933..1600037)  hypothetical protein; SERP1551  N/A  Click
54 complement(1600130..1600648)  PHAGE_Staphy_GH15: hypothetical protein; SERP1552; phage(gi418488101)  3e-69  Click
55 complement(1600648..1601298)  PHAGE_Campyl_CPX: hypothetical protein; SERP1553; phage(gi371670983)  8e-05  Click
56 complement(1601298..1601618)  hypothetical protein; SERP1554  N/A  Click
57 complement(1601608..1602333)  PHAGE_Staphy_GH15: putative protein phosphatase; SERP1555; phage(gi418487943)  2e-78  Click
58 complement(1602333..1602554)  hypothetical protein; SERP1556  N/A  Click
59 complement(1602574..1602750)  hypothetical protein; SERP1557  N/A  Click
60 complement(1602743..1603285)  hypothetical protein; SERP1558  N/A  Click
61 complement(1603301..1603573)  hypothetical protein; SERP1559  N/A  Click
62 complement(1603599..1603754)  PHAGE_Staphy_37: ORF098; SERP1560; phage(gi66395798)  3e-05  Click
63 complement(1603751..1604035)  hypothetical protein; SERP1561  N/A  Click
64 complement(1604051..1604236)  hypothetical protein; SERP1562  N/A  Click
65 complement(1604221..1604400)  hypothetical protein; SERP1563  N/A  Click
66 complement(1604416..1604898)  PHAGE_Methan_psiM100: hypothetical protein psiM100p11; SERP1564; phage(gi11863096)  4e-05  Click
67 complement(1605095..1605298)  hypothetical protein; SERP1565  N/A  Click
68 complement(1605303..1605569)  hypothetical protein; SERP1566  N/A  Click
69 complement(1605591..1605866)  PHAGE_Staphy_Twort: ORF146; SERP1567; phage(gi66391387)  5e-25  Click
70 complement(1605889..1606128)  hypothetical protein; SERP1568  N/A  Click
71 complement(1606150..1606374)  hypothetical protein; SERP1569  N/A  Click
72 complement(1606380..1606727)  PHAGE_Staphy_vB_SepiS_phiIPLA5: nuclease; SERP1570; phage(gi399528953)  1e-43  Click
73 complement(1606724..1607134)  PHAGE_Paenib_phiIBB_Pl23: hypothetical protein; SERP1571; phage(gi526245067)  4e-07  Click
74 complement(1607174..1607437)  PHAGE_Staphy_2638A: ORF044; SERP1572; phage(gi66395486)  4e-23  Click
75 complement(1607440..1607748)  PHAGE_Staphy_96: ORF035; SERP1573; phage(gi66395920)  5e-12  Click
76 complement(1607754..1607864)  hypothetical protein; SERP1574  N/A  Click
77 complement(1607845..1607967)  hypothetical protein; SERP1575  N/A  Click
78 complement(1608040..1608315)  hypothetical protein; SERP1576  N/A  Click
79 complement(1608328..1608525)  hypothetical protein; SERP1577  N/A  Click
80 complement(1608536..1609375)  hypothetical protein; SERP1578  N/A  Click
81 1609626..1610300  PROPHAGE_Brucel_1330: transposase, putative; SERP1579; phage(gi23502708)  3e-34  Click
82 complement(1610332..1610754)  hypothetical protein; SERP1580  N/A  Click
83 complement(1610764..1611249)  PHAGE_Bacill_BCD7: dihydrofolate reductase; SERP1581; phage(gi422936066)  3e-24  Click
84 complement(1611291..1612247)  PHAGE_Bacill_phiAGATE: putative thymidylate synthase; SERP1582; phage(gi448260873)  3e-80  Click
85 1612361..1612684  PROPHAGE_Brucel_1330: transposase, putative; SERP1583; phage(gi23502708)  3e-22  Click
86 1612762..1613934  PROPHAGE_Escher_CFT073: transposase; SERP1584; phage(gi26246249)  4e-36  Click
87 complement(1614064..1615503)  6'-aminoglycoside N-acetyltransferase/2''-aminoglycoside phosphotransferase; SERP1585  N/A  Click
88 complement(1615504..1615896)  PHAGE_Erwini_phiEaH2: N-acetyltransferase GCN5; SERP1586; phage(gi431810590)  5e-06  Click
89 complement(1615953..1617125)  PROPHAGE_Escher_CFT073: transposase; SERP1587; phage(gi26246249)  4e-36  Click
90 1617188..1617610  PROPHAGE_Brucel_1330: transposase, putative; SERP1588; phage(gi23502708)  3e-07  Click
91 complement(1617909..1618646)  PHAGE_Bacill_Bastille: metal-dependent hydrolase; SERP1589; phage(gi410492259)  2e-23  Click
92 complement(1618839..1620605)  PHAGE_Bacill_SPBc2: putative ss-DNA-specific endonuclease; SERP1590; phage(gi9630257)  4e-66  Click
93 complement(1620608..1621720)  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p131; SERP1591; phage(gi9630256)  7e-69  Click
94 complement(1621737..1623269)  PHAGE_Bacill_SPBc2: putative replicative DNA helicase; SERP1592; phage(gi9630255)  2e-73  Click
95 complement(1623291..1623809)  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p129; SERP1593; phage(gi9630254)  1e-25  Click
96 complement(1623886..1624854)  PHAGE_Bacill_SPBc2: ATP/GTP binding protein; SERP1594; phage(gi9630253)  7e-84  Click
97 complement(1624978..1625937)  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p127; SERP1595; phage(gi9630252)  4e-17  Click
98 complement(1625981..1626661)  hypothetical protein; SERP1596  N/A  Click
99 complement(1626679..1627167)  hypothetical protein; SERP1597  N/A  Click
100 complement(1627183..1627476)  hypothetical protein; SERP1598  N/A  Click
101 complement(1627591..1628595)  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p088; SERP1599; phage(gi9630213)  1e-16  Click
102 complement(1628607..1629887)  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p087; SERP1600; phage(gi9630212)  8e-27  Click
103 1630144..1630156  attR    TTCGTAAATAGCA  N/A  Click
104 complement(1630198..1631241)  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p086; SERP1601; phage(gi9630211)  2e-21  Click
105 1638109..1638120  attR    CTTATTATTAAG  N/A  Click
Region 2, total : 30 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1638606..1638620  attL    TCTAAATAATTATAT  N/A  Click
2 1649716..1650600  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p057; SERP1624; phage(gi9630182)  2e-31  Click
3 1650593..1652392  PHAGE_Lactoc_949: putative terminase ATPase subunit; SERP1625; phage(gi327197990)  6e-40  Click
4 1652410..1653972  PHAGE_Lactoc_949: putative phage structural protein; SERP1626; phage(gi327197989)  3e-63  Click
5 1653965..1655344  PHAGE_Lactoc_949: putative phage structural protein; SERP1627; phage(gi327197988)  1e-25  Click
6 1655372..1655812  hypothetical protein; SERP1628  N/A  Click
7 1655851..1656852  PHAGE_Lactoc_949: putative phage structural protein; SERP1629; phage(gi327197986)  7e-49  Click
8 1656927..1657478  PHAGE_Lactoc_949: hypothetical protein; SERP1630; phage(gi327197985)  1e-12  Click
9 1657496..1657930  PHAGE_Lactoc_949: putative phage structural protein; SERP1631; phage(gi327197984)  2e-10  Click
10 1657920..1658237  PHAGE_Lactoc_949: hypothetical protein; SERP1632; phage(gi327197983)  3e-05  Click
11 1658241..1658906  hypothetical protein; SERP1633  N/A  Click
12 1658896..1659417  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p047; SERP1634; phage(gi9630172)  6e-08  Click
13 1659423..1660295  PHAGE_Bacill_SPBc2: hypothetical protein SPBc2p046; SERP1635; phage(gi9630171)  4e-15  Click
14 1660334..1661125  PHAGE_Lactoc_949: putative phage structural protein; SERP1636; phage(gi327197979)  5e-06  Click
15 1661209..1661766  hypothetical protein; SERP1637  N/A  Click
16 1661766..1662239  hypothetical protein; SERP1638  N/A  Click
17 1662255..1663271  PHAGE_Lactoc_949: putative site specific recombinase; SERP1639; phage(gi327197974)  3e-43  Click
18 1663368..1671641  PHAGE_Bacill_SPBc2: putative transglycosylase; SERP1640; phage(gi9630157)  2e-81  Click
19 1671663..1673744  PHAGE_Lactoc_949: putative phage tail component; SERP1641; phage(gi327197972)  9e-13  Click
20 1673805..1681850  PHAGE_Lactoc_949: putative tail protein; SERP1642; phage(gi327197971)  2e-54  Click
21 1681853..1682227  hypothetical protein; SERP1643  N/A  Click
22 1682220..1682387  hypothetical protein; SERP1644  N/A  Click
23 1682429..1685098  PHAGE_Staphy_JS01: phage minor structural protein; SERP1645; phage(gi526003577)  9e-24  Click
24 1685145..1685606  PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; SERP1646; phage(gi399528917)  5e-20  Click
25 1685588..1686100  PHAGE_Staphy_vB_SepiS_phiIPLA5: exonuclease; SERP1647; phage(gi399528918)  1e-18  Click
26 1686122..1686451  PHAGE_Lactoc_bIL286: holin; SERP1648; phage(gi13095803)  5e-07  Click
27 1686503..1688896  PHAGE_Staphy_vB_SepiS_phiIPLA5: virion associated hydrolase; SERP1649; phage(gi399528912)  2e-09  Click
28 1689084..1690475  PHAGE_Staphy_PH15: phage amidase; SERP1650; phage(gi119967860)  7e-91  Click
29 complement(1690551..1690751)  hypothetical protein; SERP1651  N/A  Click
30 complement(1691131..1691307)  hypothetical protein; SERP1652  N/A  Click
31 complement(1691446..1693092)  PHAGE_Staphy_SA11: hypothetical protein; SERP1653; phage(gi422935732)  2e-11  Click
32 1702936..1702950  attR    TCTAAATAATTATAT  N/A  Click