| Definition | Neisseria gonorrhoeae FA 1090, complete genome. |
|---|---|
| Accession | NC_002946 |
| Length | 2,153,922 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 68 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 442212..442224 | attL GATGCCGTCTGAA | N/A | Click |
| 2 | 442216..442227 | attL CCGTCTGAAAGG | N/A | Click |
| 3 | 451840..452292 | PHAGE_Erwini_vB_EamP_S6: deoxyuridine 5'-triphosphate nucleotidohydrolase; NGO0459; phage(gi422935886) | 4e-49 | Click |
| 4 | 452364..453551 | succinyldiaminopimelate transaminase; NGO0460 | N/A | Click |
| 5 | 453863..454642 | hypothetical protein; NGO0461 | N/A | Click |
| 6 | 454725..454812 | tRNA | N/A | Click |
| 7 | 454893..454979 | tRNA | N/A | Click |
| 8 | 455173..456369 | PHAGE_Entero_P4: integrase; NGO0462; phage(gi9627511) | 8e-44 | Click |
| 9 | complement(456725..456994) | putative phage associated protein; NGO0463 | N/A | Click |
| 10 | complement(457189..457872) | PHAGE_Pseudo_JBD24: hypothetical protein; NGO0464; phage(gi448245062) | 2e-25 | Click |
| 11 | complement(457883..458419) | putative phage associated protein; NGO0465 | N/A | Click |
| 12 | complement(458530..458745) | putative phage associated protein; NGO0466 | N/A | Click |
| 13 | complement(458797..459288) | PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; NGO0467; phage(gi374531698) | 3e-18 | Click |
| 14 | complement(459285..459467) | putative phage associated protein; NGO0468 | N/A | Click |
| 15 | complement(459607..460293) | PHAGE_Salini_CW02: hypothetical protein; NGO0469; phage(gi423261934) | 1e-05 | Click |
| 16 | complement(460362..460523) | putative phage associated protein; NGO0470 | N/A | Click |
| 17 | complement(460520..460735) | putative phage associated protein; NGO0471 | N/A | Click |
| 18 | complement(460949..461236) | putative phage associated protein; NGO0472 | N/A | Click |
| 19 | complement(461422..461697) | PHAGE_Human__2: EBNA-1; NGO0473; phage(gi139424506) | 1e-16 | Click |
| 20 | complement(461694..462170) | PHAGE_Iodoba_phiPLPE: hypothetical protein phiPLPE_84; NGO0474; phage(gi197085698) | 4e-26 | Click |
| 21 | complement(462203..462403) | putative phage associated protein; NGO0475 | N/A | Click |
| 22 | complement(462601..463014) | putative phage associated protein; NGO0476 | N/A | Click |
| 23 | complement(463011..463448) | putative phage associated protein; NGO0477 | N/A | Click |
| 24 | complement(463489..463926) | putative phage associated protein; NGO0478 | N/A | Click |
| 25 | complement(464039..464755) | PHAGE_Salmon_ST160: C2; NGO0479; phage(gi318065925) | 7e-20 | Click |
| 26 | 465140..465295 | putative phage associated protein; NGO0480 | N/A | Click |
| 27 | complement(465272..465460) | putative phage associated protein; NGO0481 | N/A | Click |
| 28 | complement(465465..465827) | putative phage associated protein; NGO0482 | N/A | Click |
| 29 | 465633..465860 | putative phage associated protein; NGO0483 | N/A | Click |
| 30 | 465978..467042 | PHAGE_Haemop_Aaphi23: putative DNA replication protein O; NGO0484; phage(gi31544014) | 7e-36 | Click |
| 31 | 467039..468400 | PHAGE_Marino_P12026: replicative DNA helicase; NGO0485; phage(gi399528354) | 3e-61 | Click |
| 32 | 468417..468701 | putative phage associated protein; NGO0486 | N/A | Click |
| 33 | 468740..469234 | PHAGE_Synech_S_CBS4: hypothetical protein; NGO0487; phage(gi374531810) | 2e-05 | Click |
| 34 | 469411..469560 | putative phage associated protein; NGO0488 | N/A | Click |
| 35 | 469696..470241 | PHAGE_Entero_c_1: holliday-junction resolvase RusA; NGO0489; phage(gi428781794) | 2e-06 | Click |
| 36 | 470231..470464 | putative phage associated protein; NGO0490 | N/A | Click |
| 37 | 470508..470915 | putative phage associated protein; NGO0491 | N/A | Click |
| 38 | 471138..471644 | putative phage associated protein; NGO0492 | N/A | Click |
| 39 | 471965..472186 | putative phage associated protein; NGO0493 | N/A | Click |
| 40 | 472479..472928 | PHAGE_Entero_Sf6: gene 1 protein; NGO0494; phage(gi41057279) | 3e-29 | Click |
| 41 | 472990..474411 | PHAGE_Acinet_Bphi_B1251: hypothetical protein; NGO0495; phage(gi423262000) | 3e-156 | Click |
| 42 | 474408..476555 | PHAGE_Thermu_TMA: portal protein; NGO0496; phage(gi343960384) | 4e-12 | Click |
| 43 | 476623..477780 | PHAGE_Thermo_THSA_485A: hypothetical protein; NGO0497; phage(gi397912637) | 1e-21 | Click |
| 44 | 477821..479320 | PHAGE_Thermo_THSA_485A: hypothetical protein; NGO0498; phage(gi397912636) | 9e-33 | Click |
| 45 | 479327..479689 | PHAGE_Saimir_2: unnamed protein product; NGO0499; phage(gi9626029) | 4e-05 | Click |
| 46 | 479692..480222 | PHAGE_Strept_phiSASD1: gp29; NGO0500; phage(gi298103494) | 1e-06 | Click |
| 47 | 480370..480702 | putative phage associated protein; NGO0501 | N/A | Click |
| 48 | 480699..481127 | putative phage associated protein; NGO0502 | N/A | Click |
| 49 | 481153..481926 | putative phage associated protein; NGO0503 | N/A | Click |
| 50 | 481987..482316 | putative phage associated protein; NGO0504 | N/A | Click |
| 51 | 482328..482594 | putative phage associated protein; NGO0505 | N/A | Click |
| 52 | 482594..483193 | PHAGE_Caulob_CcrRogue: hypothetical protein; NGO0506; phage(gi414088956) | 6e-05 | Click |
| 53 | 483190..484044 | PHAGE_Caulob_CcrMagneto: putative tail protein; NGO0507; phage(gi414088603) | 3e-18 | Click |
| 54 | 484046..484477 | PHAGE_Roseob_1: phage cell wall peptidase; NGO0508; phage(gi331028137) | 6e-12 | Click |
| 55 | complement(484505..484786) | PHAGE_Pseudo_phiKZ: ORF114; NGO0509; phage(gi29135050) | 3e-12 | Click |
| 56 | 485026..489171 | PHAGE_Burkho_KL1: tail protein; NGO0510; phage(gi399528737) | 2e-12 | Click |
| 57 | 489283..489588 | hypothetical protein; NGO0511 | N/A | Click |
| 58 | complement(489593..490528) | PHAGE_Strept_VWB: hypothetical protein VWBp25; NGO0512; phage(gi41057241) | 2e-07 | Click |
| 59 | 489659..490129 | putative phage associated protein; NGO0513 | N/A | Click |
| 60 | 490130..490462 | putative phage associated protein; NGO0514 | N/A | Click |
| 61 | complement(490591..490824) | putative phage associated protein; NGO0515 | N/A | Click |
| 62 | complement(490832..491179) | PHAGE_Strept_1: transcriptional regulator; NGO0516; phage(gi39653708) | 5e-08 | Click |
| 63 | complement(491179..491415) | putative pemI-like protein (PemI), putative phage associated protein; NGO0517 | N/A | Click |
| 64 | 491622..492161 | PHAGE_Pseudo_vB_Pae_Kakheti25: endolysin; NGO0518; phage(gi388542662) | 3e-52 | Click |
| 65 | 492162..492506 | PHAGE_Entero_vB_KleM_RaK2: hypothetical protein; NGO0519; phage(gi422936900) | 1e-06 | Click |
| 66 | 492680..492991 | putative phage associated protein; NGO0520 | N/A | Click |
| 67 | 493004..493153 | phage associated protein; NGO0521 | N/A | Click |
| 68 | 493183..496230 | PHAGE_Burkho_KL1: tail tape measure; NGO0522; phage(gi399528734) | 2e-68 | Click |
| 69 | complement(496290..496769) | putative phage associated protein; NGO0523 | N/A | Click |
| 70 | 496781..496792 | attR CCGTCTGAAAGG | N/A | Click |
| 71 | complement(497111..498100) | PHAGE_Mannhe_phiMHaA1: integrase; NGO0524; phage(gi109289985) | 2e-79 | Click |
| 72 | complement(498360..498548) | hypothetical protein; NGO0525 | N/A | Click |
| 73 | 498789..499823 | PHAGE_Prochl_P_SSM2: phosphoribosylaminoimidazole synthetase; NGO0526; phage(gi61806048) | 8e-69 | Click |
| 74 | 511136..511148 | attR GATGCCGTCTGAA | N/A | Click |
Region 2, total : 6 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(726767..727315) | PHAGE_Pseudo_phiCTX: predicted baseplate or base of tail fiber; NGO0727; phage(gi17313237) | 8e-30 | Click |
| 2 | complement(727336..728238) | PHAGE_Pseudo_phiCTX: predicted baseplate; NGO0728; phage(gi17313236) | 5e-17 | Click |
| 3 | complement(728344..728556) | putative phage associated protein; NGO0729 | N/A | Click |
| 4 | complement(728611..729264) | PROPHAGE_Neisse_MC58: IS1016C2 transposase; NGO0730; phage(gi15677271) | 4e-92 | Click |
| 5 | complement(729286..729570) | putative phage associated protein; NGO0731 | N/A | Click |
| 6 | complement(729607..729870) | putative phage associated protein; NGO0732 | N/A | Click |
Region 3, total : 62 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1044447..1045292 | PHAGE_Haemop_Aaphi23: putative antirepressor protein Ant; NGO1085; phage(gi31544021) | 6e-38 | Click |
| 2 | complement(1045279..1045479) | putative phage associated protein; NGO1086 | N/A | Click |
| 3 | 1045494..1046174 | putative phage associated protein; NGO1087 | N/A | Click |
| 4 | complement(1046153..1046638) | PHAGE_Pseudo_F116: hypothetical protein F116p45; NGO1088; phage(gi56692956) | 2e-10 | Click |
| 5 | complement(1046644..1047117) | PHAGE_Pseudo_F116: virion structural protein; NGO1089; phage(gi56692924) | 9e-28 | Click |
| 6 | complement(1047173..1048468) | PHAGE_Pseudo_F116: virion structural protein; NGO1090; phage(gi56692923) | 4e-136 | Click |
| 7 | complement(1048489..1048887) | PHAGE_Pseudo_F116: hypothetical protein F116p42; NGO1091; phage(gi56692955) | 2e-15 | Click |
| 8 | complement(1049094..1055027) | PHAGE_Sinorh_PBC5: putative DNA methylase; NGO1092; phage(gi18071214) | 8e-78 | Click |
| 9 | complement(1055027..1056445) | PHAGE_Human__4: EBNA-1; NGO1093; phage(gi82503233) | 2e-11 | Click |
| 10 | complement(1056442..1057638) | PHAGE_Pseudo_F116: hypothetical protein F116p58; NGO1094; phage(gi56692969) | 2e-06 | Click |
| 11 | complement(1057849..1058322) | putative phage associated protein; NGO1095 | N/A | Click |
| 12 | complement(1058422..1058637) | putative phage associated protein; NGO1096 | N/A | Click |
| 13 | complement(1058674..1060926) | PHAGE_Pseudo_F116: portal protein; NGO1097; phage(gi56692922) | 0.0 | Click |
| 14 | complement(1060926..1062200) | PHAGE_Bdello_phi1422: putative TerL large-subunit terminase; NGO1098; phage(gi422936857) | 1e-54 | Click |
| 15 | complement(1062181..1062423) | putative phage associated protein; NGO1099 | N/A | Click |
| 16 | complement(1062478..1062720) | PHAGE_Escher_HK639: terminase small subunit; NGO1100; phage(gi356870601) | 1e-06 | Click |
| 17 | complement(1062720..1063034) | PHAGE_Pseudo_F116: hypothetical protein F116p37; NGO1101; phage(gi56692953) | 2e-09 | Click |
| 18 | complement(1063207..1063725) | PHAGE_Xantho_OP1: HNH endonuclease family protein; NGO1102; phage(gi84662624) | 4e-32 | Click |
| 19 | complement(1063716..1064099) | PHAGE_Pseudo_PAJU2: putative NinB; NGO1103; phage(gi209552487) | 7e-21 | Click |
| 20 | complement(1064096..1064401) | PHAGE_Pseudo_F116: hypothetical protein F116p35; NGO1104; phage(gi56692951) | 4e-15 | Click |
| 21 | 1064373..1064993 | putative phage associated protein; NGO1105 | N/A | Click |
| 22 | complement(1065119..1065268) | putative phage associated protein; NGO1106 | N/A | Click |
| 23 | 1065246..1065614 | putative phage associated protein; NGO1107 | N/A | Click |
| 24 | complement(1065652..1066146) | PHAGE_Synech_S_CBS4: hypothetical protein; NGO1108; phage(gi374531810) | 2e-05 | Click |
| 25 | complement(1066185..1066469) | putative phage associated protein; NGO1109 | N/A | Click |
| 26 | complement(1066486..1067847) | PHAGE_Marino_P12026: replicative DNA helicase; NGO1110; phage(gi399528354) | 5e-62 | Click |
| 27 | complement(1067844..1068974) | PHAGE_Haemop_Aaphi23: putative DNA replication protein O; NGO1111; phage(gi31544014) | 5e-30 | Click |
| 28 | complement(1069092..1069319) | putative phage associated protein; NGO1112 | N/A | Click |
| 29 | 1069492..1069680 | putative phage associated protein; NGO1113 | N/A | Click |
| 30 | complement(1069657..1069812) | putative phage associated protein; NGO1114 | N/A | Click |
| 31 | complement(1069893..1070081) | putative phage associated protein; NGO1115 | N/A | Click |
| 32 | 1070260..1070907 | PHAGE_Erwini_phiEt88: phage repressor protein; NGO1116; phage(gi327198606) | 3e-37 | Click |
| 33 | 1071067..1071606 | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; NGO1117; phage(gi399498806) | 3e-33 | Click |
| 34 | 1071607..1071966 | putative phage associated protein; NGO1118 | N/A | Click |
| 35 | complement(1071983..1072201) | putative phage associated protein; NGO1119 | N/A | Click |
| 36 | 1072684..1072884 | putative phage associated protein; NGO1120 | N/A | Click |
| 37 | 1072917..1073393 | PHAGE_Iodoba_phiPLPE: hypothetical protein phiPLPE_84; NGO1121; phage(gi197085698) | 4e-26 | Click |
| 38 | 1073390..1073665 | PHAGE_Human__2: EBNA-1; NGO1122; phage(gi139424506) | 1e-16 | Click |
| 39 | 1073806..1074138 | putative phage associated protein; NGO1123 | N/A | Click |
| 40 | 1074307..1074567 | putative phage associated protein; NGO1124 | N/A | Click |
| 41 | 1074564..1074725 | putative phage associated protein; NGO1125 | N/A | Click |
| 42 | 1074794..1075480 | PHAGE_Salini_CW02: hypothetical protein; NGO1126; phage(gi423261934) | 1e-05 | Click |
| 43 | 1075620..1075802 | putative phage associated protein; NGO1127 | N/A | Click |
| 44 | 1075799..1076290 | PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; NGO1128; phage(gi374531698) | 9e-18 | Click |
| 45 | 1076342..1076557 | putative phage associated protein; NGO1129 | N/A | Click |
| 46 | 1076668..1077651 | putative phage associated protein; NGO1130 | N/A | Click |
| 47 | 1077648..1078061 | putative phage associated protein; NGO1131 | N/A | Click |
| 48 | 1078087..1078281 | putative phage associated protein; NGO1132 | N/A | Click |
| 49 | complement(1078340..1078421) | tRNA | N/A | Click |
| 50 | 1078572..1079246 | hypothetical protein; NGO1133 | N/A | Click |
| 51 | 1079239..1079832 | GTP cyclohydrolase II; NGO1134 | N/A | Click |
| 52 | complement(1079913..1080224) | hypothetical protein; NGO1135 | N/A | Click |
| 53 | 1079991..1080200 | hypothetical protein; NGO1136 | N/A | Click |
| 54 | 1080185..1081147 | PROPHAGE_Escher_CFT073: transposase; NGO1137; phage(gi26248352) | 7e-08 | Click |
| 55 | complement(1082262..1083347) | PHAGE_Ralsto_PE226: putative phage assembly protein; NGO1138; phage(gi327198635) | 1e-15 | Click |
| 56 | complement(1083352..1083648) | putative phage associated protein; NGO1139 | N/A | Click |
| 57 | complement(1083649..1085172) | PHAGE_Human__1: large tegument protein; NGO1140; phage(gi155041490) | 1e-08 | Click |
| 58 | complement(1085156..1085488) | putative phage associated protein; NGO1141 | N/A | Click |
| 59 | complement(1085601..1085879) | putative phage associated protein; NGO1142 | N/A | Click |
| 60 | complement(1085886..1086104) | putative phage associated protein; NGO1143 | N/A | Click |
| 61 | complement(1086190..1086393) | putative phage associated protein; NGO1144 | N/A | Click |
| 62 | complement(1086407..1086718) | putative phage associated protein; NGO1145 | N/A | Click |
| 63 | complement(1086789..1088060) | PHAGE_Ralsto_PE226: putative phage DNA replicase; NGO1146; phage(gi327198637) | 2e-19 | Click |
Region 4, total : 40 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1564998..1565015 | attL AAAATGCCGTCTGAAACC | N/A | Click |
| 2 | 1579422..1580477 | PHAGE_Synech_S_SSM7: transaldolase-like protein; NGO1610; phage(gi326783962) | 1e-05 | Click |
| 3 | 1580935..1581822 | glutamyl-Q tRNA(Asp) synthetase; NGO1611 | N/A | Click |
| 4 | complement(1581892..1582938) | tRNA-dihydrouridine synthase A; NGO1612 | N/A | Click |
| 5 | 1583028..1584182 | PHAGE_Burkho_AH2: integrase; NGO1613; phage(gi399529076) | 2e-49 | Click |
| 6 | complement(1584232..1584498) | putative phage associated protein; NGO1614 | N/A | Click |
| 7 | complement(1584606..1585754) | putative phage associated protein; NGO1615 | N/A | Click |
| 8 | complement(1585751..1586734) | putative phage associated protein; NGO1616 | N/A | Click |
| 9 | complement(1586845..1587060) | putative phage associated protein; NGO1617 | N/A | Click |
| 10 | complement(1587112..1587603) | PHAGE_Pseudo_vB_PaeS_PMG1: hypothetical protein; NGO1618; phage(gi374531698) | 9e-18 | Click |
| 11 | complement(1587600..1587782) | putative phage associated protein; NGO1619 | N/A | Click |
| 12 | complement(1587922..1588425) | putative phage associated protein; NGO1620 | N/A | Click |
| 13 | complement(1588677..1588838) | putative phage associated protein; NGO1621 | N/A | Click |
| 14 | complement(1588835..1589110) | putative phage associated protein; NGO1622 | N/A | Click |
| 15 | complement(1589263..1589550) | putative phage associated protein; NGO1623 | N/A | Click |
| 16 | complement(1589736..1589936) | putative phage associated protein; NGO1624 | N/A | Click |
| 17 | complement(1590177..1590593) | putative phage associated protein; NGO1625 | N/A | Click |
| 18 | complement(1590602..1591249) | PHAGE_Salmon_vB_SemP_Emek: hypothetical protein; NGO1626; phage(gi399498806) | 5e-08 | Click |
| 19 | complement(1591369..1591770) | PHAGE_Haemop_HP2: hypothetical protein HP2p14; NGO1627; phage(gi17981828) | 9e-16 | Click |
| 20 | complement(1591873..1592055) | PHAGE_Haemop_HP2: hypothetical protein HP2p13; NGO1628; phage(gi19289355) | 1e-12 | Click |
| 21 | complement(1592225..1593043) | putative phage associated protein; NGO1629 | N/A | Click |
| 22 | complement(1593316..1594071) | PHAGE_Pseudo_F116: transcriptional regulator; NGO1630; phage(gi56692918) | 9e-24 | Click |
| 23 | 1594482..1594637 | putative phage associated protein; NGO1631 | N/A | Click |
| 24 | complement(1594614..1594802) | putative phage associated protein; NGO1632 | N/A | Click |
| 25 | 1594975..1595202 | putative phage associated protein; NGO1633 | N/A | Click |
| 26 | 1595199..1595750 | PHAGE_Entero_phiP27: hypothetical protein P27p17; NGO1634; phage(gi18249881) | 3e-15 | Click |
| 27 | 1596026..1596241 | putative phage associated protein; NGO1635 | N/A | Click |
| 28 | 1596419..1597036 | PHAGE_Gifsy_2: bacteriophage DNA replication protein; NGO1636; phage(gi169257280) | 4e-32 | Click |
| 29 | 1597106..1597261 | putative phage associated protein; NGO1637 | N/A | Click |
| 30 | 1597352..1597846 | PHAGE_Synech_S_CBS4: hypothetical protein; NGO1638; phage(gi374531810) | 2e-05 | Click |
| 31 | complement(1597884..1598387) | putative phage associated protein; NGO1639 | N/A | Click |
| 32 | 1598474..1599049 | PHAGE_Entero_cdtI: holliday junction resolvase; NGO1640; phage(gi148609431) | 1e-05 | Click |
| 33 | complement(1599378..1600340) | PROPHAGE_Escher_CFT073: transposase; NGO1641; phage(gi26248352) | 7e-08 | Click |
| 34 | complement(1600891..1601214) | putative phage associated protein; NGO1642 | N/A | Click |
| 35 | complement(1601335..1602420) | PHAGE_Ralsto_p12J: ORF7; NGO1643; phage(gi156535142) | 2e-16 | Click |
| 36 | complement(1602430..1602720) | putative phage associated protein; NGO1645 | N/A | Click |
| 37 | 1603894..1604178 | putative phage associated protein; NGO1646 | N/A | Click |
| 38 | 1604179..1605366 | PHAGE_Ralsto_p12J: ORF7; NGO1647; phage(gi156535142) | 6e-28 | Click |
| 39 | 1605581..1606537 | PROPHAGE_Escher_CFT073: transposase; NGO1648; phage(gi26248352) | 2e-08 | Click |
| 40 | 1606828..1607367 | PHAGE_Vibrio_ICP1: putative Gp5 baseplate hub subunit and tail lysozyme; NGO1649; phage(gi325171175) | 8e-19 | Click |
| 41 | 1607368..1607712 | PHAGE_Entero_vB_KleM_RaK2: hypothetical protein; NGO1650; phage(gi422936900) | 1e-06 | Click |
| 42 | 1608229..1608609 | putative phage associated protein; NGO1651 | N/A | Click |
| 43 | complement(1608810..1609808) | PHAGE_Aggreg_S1249: putative antirepressor protein Ant; NGO1652; phage(gi273809579) | 5e-36 | Click |
| 44 | 1620122..1620139 | attR AAAATGCCGTCTGAAACC | N/A | Click |