Definition Haemophilus ducreyi 35000HP, complete genome.
Accession NC_002940
Length 1,698,955
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 54 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 75767..76684  PHAGE_Entero_Mu: DNA transposition protein; HD0095; phage(gi9633513)  5e-59  Click
2 76684..76917  hypothetical protein; HD0096  N/A  Click
3 76930..77547  PHAGE_Burkho_phiE255: gp36; HD0097; phage(gi134288843)  4e-69  Click
4 77540..77776  hypothetical protein; HD0098  N/A  Click
5 77879..77974  hypothetical protein; HD0099  N/A  Click
6 78034..78168  hypothetical protein; HD0100  N/A  Click
7 78171..78389  hypothetical protein; HD0101  N/A  Click
8 78392..78595  hypothetical protein; HD0102  N/A  Click
9 78592..78927  hypothetical protein; HD0103  N/A  Click
10 78936..79229  hypothetical protein; HD0104  N/A  Click
11 79231..79968  PHAGE_Pseudo_JBD24: hypothetical protein; HD0105; phage(gi448245062)  2e-25  Click
12 79968..80243  PHAGE_Burkho_BcepF1: hypothetical protein BcepF1.020; HD0106; phage(gi126010954)  5e-12  Click
13 80321..80791  PHAGE_Burkho_KS10: hypothetical protein KS10_gp20; HD0107; phage(gi198449282)  2e-12  Click
14 80773..81141  hypothetical protein; HD0108  N/A  Click
15 complement(81037..81471)  hypothetical protein; HD0109  N/A  Click
16 81119..81583  PHAGE_Entero_Mu: hypothetical protein Mup16; HD0110; phage(gi9633506)  3e-13  Click
17 81559..81915  PHAGE_Entero_Mu: putative transcription regulator; HD0111; phage(gi9633511)  3e-18  Click
18 82023..82544  PHAGE_Haemop_SuMu: putative N-acetylmuramoyl-L-alanine amidase; HD0112; phage(gi418489052)  2e-72  Click
19 82549..82767  hypothetical protein; HD0113  N/A  Click
20 82777..83007  PHAGE_Haemop_SuMu: hypothetical protein; HD0114; phage(gi418489053)  6e-23  Click
21 83010..83294  hypothetical protein; HD0115  N/A  Click
22 complement(83355..84017)  hypothetical protein; HD0119  N/A  Click
23 83414..83644  PHAGE_Entero_P2: Orf82; HD0117; phage(gi9630364)  5e-05  Click
24 83641..83976  Mu-like phage gp25; HD0118  N/A  Click
25 84064..84279  PHAGE_Entero_Mu: hypothetical protein Mup26; HD0120; phage(gi9633517)  3e-13  Click
26 84302..84871  PHAGE_Entero_Mu: hypothetical protein Mup27; HD0121; phage(gi9633518)  4e-34  Click
27 84871..86430  PHAGE_Entero_Mu: putative portal protein; HD0123; phage(gi9633519)  1e-139  Click
28 86434..88038  PHAGE_Entero_Mu: hypothetical protein Mup29; HD0124; phage(gi9633520)  2e-137  Click
29 89500..89943  PHAGE_Entero_Mu: putative virion morphogenesis protein; HD0127; phage(gi9633522)  4e-13  Click
30 complement(89897..89989)  hypothetical protein; HD0128  N/A  Click
31 91186..92097  PHAGE_Entero_Mu: major head subunit; HD0132; phage(gi9633525)  6e-84  Click
32 92172..92552  hypothetical protein; HD0133  N/A  Click
33 92552..92971  PHAGE_Entero_Mu: hypothetical protein Mup36; HD0134; phage(gi9633527)  2e-19  Click
34 92971..93624  PHAGE_Entero_Mu: hypothetical protein Mup37; HD0135; phage(gi9633528)  2e-16  Click
35 93614..94354  PHAGE_Pseudo_MP38: hypothetical protein PPMP38_gp39; HD0136; phage(gi215479963)  1e-39  Click
36 94400..94828  PHAGE_Pseudo_JBD24: hypothetical protein; HD0137; phage(gi448245092)  6e-20  Click
37 94837..95016  hypothetical protein; HD0138  N/A  Click
38 95053..97293  PHAGE_Cronob_ENT39118: phage tail tape measure protein; HD0140; phage(gi431811045)  7e-48  Click
39 97275..97457  hypothetical protein; HD0141  N/A  Click
40 97508..97816  PHAGE_Pseudo_MP22: putative tail component protein; HD0142; phage(gi157835013)  8e-12  Click
41 97831..98232  PHAGE_Burkho_KS9: tail length tape measure protein gp13; HD0143; phage(gi255033744)  2e-16  Click
42 98214..98309  hypothetical protein; HD0144  N/A  Click
43 98318..99310  PHAGE_Pseudo_JBD30: hypothetical protein; HD0145; phage(gi448244631)  6e-40  Click
44 99312..100277  PHAGE_Pseudo_B3: hypothetical protein B3ORF51; HD0146; phage(gi56692620)  5e-36  Click
45 100283..100579  hypothetical protein; HD0147  N/A  Click
46 100604..101974  PHAGE_Pseudo_B3: hypothetical protein B3ORF52; HD0148; phage(gi56692621)  7e-85  Click
47 102012..102200  hypothetical protein; HD0149  N/A  Click
48 102209..102820  PHAGE_Salmon_SPN19: putative tail assembly protein 2; HD0150; phage(gi414090177)  7e-39  Click
49 102830..103078  PHAGE_Burkho_BcepNazgul: conserved tail assembly protein; HD0151; phage(gi34610153)  3e-14  Click
50 103082..103288  hypothetical protein; HD0152  N/A  Click
51 103288..103758  PHAGE_Entero_Enc34: tail assembly protein; HD0153; phage(gi422936759)  6e-21  Click
52 103742..105391  PHAGE_Burkho_BcepNazgul: conserved tail assembly protein; HD0154; phage(gi34610151)  2e-86  Click
53 105420..106013  hypothetical protein; HD0155  N/A  Click
54 106110..106940  PHAGE_Haemop_SuMu: hypothetical protein; HD0156; phage(gi418489077)  4e-116  Click
Region 2, total : 43 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 382034..382240  PHAGE_Haemop_SuMu: Gam; HD0486; phage(gi418489041)  4e-07  Click
2 382227..382571  hypothetical protein; HD0488  N/A  Click
3 382582..383199  PHAGE_Burkho_BcepMu: gp05; HD0489; phage(gi48696915)  7e-58  Click
4 383253..383501  PHAGE_Haemop_SuMu: hypothetical protein; HD0490; phage(gi418489044)  9e-05  Click
5 383505..383684  hypothetical protein; HD0492  N/A  Click
6 383703..383999  hypothetical protein; HD0493  N/A  Click
7 383996..384199  hypothetical protein; HD0494  N/A  Click
8 384200..384478  hypothetical protein; HD0495  N/A  Click
9 384518..385102  PHAGE_Haemop_SuMu: hypothetical protein; HD0496; phage(gi418489048)  9e-62  Click
10 385086..385514  PHAGE_Haemop_SuMu: hypothetical protein; HD0497; phage(gi418489049)  9e-47  Click
11 385828..386427  PHAGE_Escher_TL_2011c: putative antirepressor; HD0498; phage(gi418487055)  2e-26  Click
12 386438..386647  hypothetical protein; HD0499  N/A  Click
13 386776..387198  PHAGE_Haemop_SuMu: hypothetical protein; HD0500; phage(gi418489051)  1e-53  Click
14 387199..387834  PHAGE_Haemop_SuMu: putative N-acetylmuramoyl-L-alanine amidase; HD0501; phage(gi418489052)  8e-78  Click
15 387839..388192  hypothetical protein; HD0502  N/A  Click
16 388179..388412  PHAGE_Haemop_SuMu: hypothetical protein; HD0503; phage(gi418489053)  3e-31  Click
17 388412..388801  PHAGE_Haemop_SuMu: hypothetical protein; HD0504; phage(gi418489054)  3e-19  Click
18 388850..389128  PHAGE_Haemop_SuMu: hypothetical protein; HD0506; phage(gi418489057)  7e-11  Click
19 389125..389379  PHAGE_Haemop_SuMu: hypothetical protein; HD0507; phage(gi418489058)  5e-28  Click
20 389387..389887  PHAGE_Haemop_SuMu: conserved possible DNA-binding protein; HD0509; phage(gi418489059)  3e-46  Click
21 389887..389982  PHAGE_Haemop_SuMu: hypothetical protein; HD0510; phage(gi418489060)  7e-05  Click
22 391626..393263  PHAGE_Haemop_SuMu: portal protein gp29; HD0514; phage(gi418489080)  0.0  Click
23 393247..394557  PHAGE_Haemop_SuMu: MuF; HD0515; phage(gi418489084)  4e-168  Click
24 394690..395106  PHAGE_Haemop_SuMu: Mu-like prophage protein gpG; HD0517; phage(gi418489082)  1e-52  Click
25 395346..396431  PHAGE_Haemop_SuMu: bacteriophage Mu I protein gp32; HD0518; phage(gi418489085)  6e-155  Click
26 396431..397354  PHAGE_Haemop_SuMu: gpT; HD0519; phage(gi418489086)  1e-144  Click
27 397401..397688  PHAGE_Haemop_SuMu: hypothetical protein; HD0520; phage(gi418489061)  1e-18  Click
28 397691..398077  PHAGE_Haemop_SuMu: Mu-like prophage protein gp36; HD0521; phage(gi418489087)  3e-16  Click
29 398074..398520  PHAGE_Pseudo_D3112: hypothetical protein D3112p39; HD0522; phage(gi38229151)  3e-18  Click
30 398550..399293  PHAGE_Pseudo_JBD24: hypothetical protein; HD0523; phage(gi448245091)  1e-37  Click
31 399351..399770  PHAGE_Pseudo_JBD24: hypothetical protein; HD0525; phage(gi448245092)  2e-18  Click
32 complement(399947..400201)  hypothetical protein; HD0526  N/A  Click
33 400216..403575  PHAGE_Pseudo_MP38: putative tail component protein; HD0527; phage(gi215479964)  3e-94  Click
34 403575..404573  PHAGE_Pseudo_JBD30: hypothetical protein; HD0529; phage(gi448244631)  4e-34  Click
35 404576..405475  PHAGE_Pseudo_MP38: hypothetical protein PPMP38_gp44; HD0530; phage(gi215479966)  6e-36  Click
36 405541..406230  PHAGE_Pseudo_B3: hypothetical protein B3ORF52; HD0531; phage(gi56692621)  3e-24  Click
37 406236..407222  PHAGE_Pseudo_JBD24: hypothetical protein; HD0532; phage(gi448245096)  2e-52  Click
38 407267..407791  PHAGE_Salmon_SPN19: putative tail assembly protein 2; HD0533; phage(gi414090177)  4e-22  Click
39 407794..408075  PHAGE_Provid_Redjac: conserved tail assembly protein; HD0534; phage(gi410490763)  4e-19  Click
40 408088..408339  PHAGE_Burkho_BcepNazgul: conserved tail assembly protein; HD0535; phage(gi34610153)  4e-16  Click
41 408357..408560  PHAGE_Burkho_AH2: tail assembly protein; HD0536; phage(gi399529092)  4e-06  Click
42 408560..411349  PHAGE_Burkho_BcepNazgul: conserved tail assembly protein; HD0538; phage(gi34610151)  1e-120  Click
43 411500..411901  PHAGE_Haemop_SuMu: hypothetical protein; HD0539; phage(gi418489077)  1e-33  Click
Region 3, total : 57 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1262080..1262430)  PHAGE_Burkho_phiE255: gp32, DNA-binding protein RdgB; HD1517; phage(gi134288805)  6e-12  Click
2 complement(1262548..1262949)  PHAGE_Burkho_BcepMu: gp02; HD1518; phage(gi48696912)  3e-13  Click
3 complement(1262939..1263313)  hypothetical protein; HD1519  N/A  Click
4 complement(1263295..1263771)  PHAGE_Burkho_KS10: hypothetical protein KS10_gp20; HD1520; phage(gi198449282)  9e-12  Click
5 complement(1263755..1263874)  hypothetical protein; HD1522  N/A  Click
6 complement(1263817..1263978)  hypothetical protein; HD1523  N/A  Click
7 complement(1263975..1264187)  hypothetical protein; HD1524  N/A  Click
8 complement(1264184..1264708)  PHAGE_Haemop_SuMu: host-nuclease inhibitor protein; HD1525; phage(gi418489043)  1e-42  Click
9 complement(1264683..1264913)  hypothetical protein; HD1526  N/A  Click
10 complement(1264906..1266111)  PHAGE_Pseudo_B3: putative transposase B subunit; HD1528; phage(gi56692579)  7e-102  Click
11 complement(1266101..1267366)  PHAGE_Pseudo_B3: putative transposase A subunit; HD1529; phage(gi56692580)  7e-75  Click
12 complement(1267353..1267931)  PHAGE_Pseudo_B3: putative transposase A subunit; HD1530; phage(gi56692580)  3e-27  Click
13 complement(1267912..1268874)  PHAGE_Pseudo_B3: hypothetical protein B3ORF13; HD1532; phage(gi56692581)  2e-17  Click
14 complement(1268904..1269206)  PHAGE_Pseudo_B3: hypothetical protein B3ORF14; HD1533; phage(gi56692582)  1e-14  Click
15 complement(1269208..1269330)  hypothetical protein; HD1534  N/A  Click
16 1269386..1269691  hypothetical protein; HD1535  N/A  Click
17 complement(1269748..1269849)  hypothetical protein; HD1537  N/A  Click
18 complement(1269856..1270050)  PHAGE_Pseudo_B3: hypothetical protein B3ORF17; HD1538; phage(gi56692585)  8e-14  Click
19 complement(1270078..1270170)  hypothetical protein; HD1539  N/A  Click
20 1270186..1270656  hypothetical protein; HD1540  N/A  Click
21 1270657..1271076  hypothetical protein; HD1541  N/A  Click
22 1271098..1271616  PHAGE_Cronob_ENT39118: hypothetical protein; HD1542; phage(gi431811067)  4e-26  Click
23 1271652..1272455  hypothetical protein; HD1543  N/A  Click
24 1272449..1272697  hypothetical protein; HD1545  N/A  Click
25 1272694..1273149  hypothetical protein; HD1546  N/A  Click
26 complement(1273271..1273603)  PHAGE_Haemop_SuMu: hypothetical protein; HD1547; phage(gi418489062)  7e-21  Click
27 1273742..1274116  PHAGE_Pseudo_B3: holin; HD1548; phage(gi56692592)  3e-11  Click
28 1274119..1274727  PHAGE_Pseudo_B3: endolysin; HD1549; phage(gi56692593)  1e-58  Click
29 1274712..1275152  PHAGE_Pseudo_JBD24: hypothetical protein; HD1550; phage(gi448245070)  6e-10  Click
30 1275255..1275605  PHAGE_Pseudo_B3: hypothetical protein B3ORF28; HD1552; phage(gi56692596)  2e-09  Click
31 1275607..1275912  PHAGE_Pseudo_B3: hypothetical protein B3ORF29; HD1553; phage(gi56692597)  9e-24  Click
32 1275922..1276461  PHAGE_Pseudo_B3: small terminase subunit; HD1554; phage(gi56692598)  9e-28  Click
33 1276461..1278080  PROPHAGE_Escher_Sakai: putative portal protein; HD1555; phage(gi15834223)  2e-107  Click
34 1278083..1279594  PHAGE_Pseudo_B3: portal protein; HD1556; phage(gi56692600)  2e-143  Click
35 1279587..1280837  PHAGE_Pseudo_B3: hypothetical protein B3ORF33; HD1557; phage(gi56692601)  7e-54  Click
36 1280944..1281435  PHAGE_Pseudo_B3: hypothetical protein B3ORF35; HD1558; phage(gi56692603)  3e-31  Click
37 1281658..1282674  PHAGE_Pseudo_B3: protease; HD1559; phage(gi56692604)  1e-57  Click
38 1282671..1283039  PHAGE_Pseudo_B3: hypothetical protein B3ORF37; HD1560; phage(gi56692606)  7e-18  Click
39 1283090..1284016  PHAGE_Pseudo_B3: capsid protein; HD1561; phage(gi56692607)  5e-106  Click
40 1284025..1284534  PHAGE_Pseudo_B3: hypothetical protein B3ORF40; HD1562; phage(gi56692609)  3e-32  Click
41 1284587..1284979  PHAGE_Pseudo_B3: hypothetical protein B3ORF41; HD1563; phage(gi56692610)  7e-16  Click
42 1284976..1285233  hypothetical protein; HD1564  N/A  Click
43 1285233..1285976  PHAGE_Pseudo_JBD24: hypothetical protein; HD1565; phage(gi448245091)  1e-37  Click
44 1286034..1286453  PHAGE_Pseudo_JBD24: hypothetical protein; HD1567; phage(gi448245092)  2e-18  Click
45 complement(1286630..1286884)  hypothetical protein; HD1568  N/A  Click
46 1286899..1290258  PHAGE_Pseudo_MP38: putative tail component protein; HD1569; phage(gi215479964)  3e-94  Click
47 1290258..1291256  PHAGE_Pseudo_B3: hypothetical protein B3ORF50; HD1571; phage(gi56692619)  5e-34  Click
48 1291259..1292158  PHAGE_Pseudo_MP38: hypothetical protein PPMP38_gp44; HD1572; phage(gi215479966)  6e-36  Click
49 1292224..1292913  PHAGE_Pseudo_B3: hypothetical protein B3ORF52; HD1573; phage(gi56692621)  3e-24  Click
50 1292919..1293905  PHAGE_Pseudo_B3: hypothetical protein B3ORF52; HD1574; phage(gi56692621)  4e-52  Click
51 1293950..1294474  PHAGE_Pseudo_B3: hypothetical protein B3ORF53; HD1575; phage(gi56692622)  1e-22  Click
52 1294594..1294758  PHAGE_Pseudo_MP42: hypothetical protein; HD1576; phage(gi399528624)  8e-12  Click
53 1294771..1295022  PHAGE_Burkho_BcepNazgul: conserved tail assembly protein; HD1577; phage(gi34610153)  4e-16  Click
54 1295040..1295243  PHAGE_Burkho_AH2: tail assembly protein; HD1578; phage(gi399529092)  4e-06  Click
55 1295243..1298032  PHAGE_Pseudo_B3: hypothetical protein B3ORF56; HD1580; phage(gi56692625)  2e-133  Click
56 1298136..1299062  PHAGE_Haemop_SuMu: hypothetical protein; HD1581; phage(gi418489077)  4e-108  Click
57 complement(1299264..1303775)  PHAGE_Ranid__1: ORF56; HD1582; phage(gi109638463)  1e-10  Click