Definition Mesorhizobium loti MAFF303099 chromosome, complete genome.
Accession NC_002678
Length 7,036,071
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 31 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(318704..319630)  PHAGE_Rhodov_RS1: hypothetical protein; mll0441; phage(gi472342900)  7e-16  Click
2 complement(319664..320056)  PHAGE_Celeri_P12053L: hypothetical protein; mll0442; phage(gi399528892)  2e-06  Click
3 complement(320053..321102)  PHAGE_Pseudo_F8: hypothetical protein ORF044; mll0443; phage(gi149408358)  4e-22  Click
4 321147..321158  attL    GGCAGCGCTTTT  N/A  Click
5 321164..321568  hypothetical protein; mlr0445  N/A  Click
6 complement(321579..323684)  PHAGE_Myxoco_Mx8: virion structural protein; mll0446; phage(gi15320627)  2e-05  Click
7 complement(323685..326231)  PHAGE_Brucel_Pr: putative peptidoglycan hydrolase; mll0448; phage(gi418487860)  5e-16  Click
8 complement(326235..326927)  PHAGE_Brucel_Pr: structural protein; mll0449; phage(gi418487858)  4e-33  Click
9 complement(327235..327630)  PHAGE_Brucel_Pr: hypothetical protein; mll0450; phage(gi418487857)  1e-27  Click
10 complement(327678..329264)  PHAGE_Brucel_Pr: structural protein; mll0452; phage(gi418487856)  4e-65  Click
11 complement(329261..329962)  PHAGE_Brucel_Pr: structural protein; mll0453; phage(gi418487855)  2e-22  Click
12 complement(329969..330796)  PHAGE_Brucel_Pr: hypothetical protein; mll0454; phage(gi418487854)  9e-11  Click
13 complement(330878..331420)  PHAGE_Myxoco_Mx8: major virion structural protein; mll0455; phage(gi15320619)  5e-23  Click
14 complement(331433..332449)  PHAGE_Brucel_Pr: major head protein; mll0457; phage(gi418487852)  2e-56  Click
15 complement(332475..333665)  PHAGE_Brucel_Pr: structural protein; mll0458; phage(gi418487851)  3e-30  Click
16 complement(333649..333975)  hypothetical protein; mll0459  N/A  Click
17 complement(333976..335175)  PHAGE_Human__4: EBNA-1; mll0460; phage(gi82503233)  9e-33  Click
18 complement(335179..335538)  hypothetical protein; mll0461  N/A  Click
19 complement(335535..337919)  PHAGE_Brucel_Pr: putative portal protein; mll0462; phage(gi418487847)  1e-138  Click
20 complement(337916..339253)  PHAGE_Xantho_Xp15: putative phage terminase large subunit; mll0463; phage(gi66392134)  2e-62  Click
21 complement(339402..339866)  PHAGE_Salmon_vB_SemP_Emek: terminase small subunit; mll0464; phage(gi399498792)  3e-48  Click
22 complement(340515..340844)  hypothetical protein; mll0465  N/A  Click
23 340927..341196  hypothetical protein; msr0466  N/A  Click
24 complement(341292..341996)  hypothetical protein; mll0467  N/A  Click
25 complement(341996..343093)  hypothetical protein; mll0468  N/A  Click
26 complement(343274..343600)  hypothetical protein; mll0469  N/A  Click
27 complement(343597..343815)  hypothetical protein; msl0470  N/A  Click
28 343822..343983  hypothetical protein; msr0471  N/A  Click
29 complement(343873..344838)  hypothetical protein; mll0472  N/A  Click
30 complement(345036..345380)  hypothetical protein; mll0473  N/A  Click
31 345774..346442  hypothetical protein; mlr0474  N/A  Click
32 346066..346077  attR    GGCAGCGCTTTT  N/A  Click
33 346455..347654  PROPHAGE_Mesorh_MAFF303099: bacteriophage integrase; mlr0475; phage(gi13470699)  0.0  Click
Region 2, total : 15 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4643194..4643206  attL    TCCATGGCCGCAC  N/A  Click
2 complement(4643427..4644614)  PHAGE_Stenot_S1: putative integrase; mll5763; phage(gi213163927)  8e-81  Click
3 complement(4645089..4646111)  transketolase; mll5764  N/A  Click
4 complement(4646108..4646947)  transketolase; mll5765  N/A  Click
5 complement(4646967..4647719)  PHAGE_Tricho_2c: hypothetical protein TNAV2c_gp071; mll5766; phage(gi116326757)  2e-18  Click
6 complement(4647760..4648653)  hypothetical protein; mll5767  N/A  Click
7 complement(4648719..4649681)  ABC transporter periplasmic-binding protein; mll5768  N/A  Click
8 complement(4649704..4650708)  PHAGE_Lactob_1: putative tape measure protein; mll5769; phage(gi62327110)  2e-05  Click
9 complement(4650705..4652237)  PHAGE_Amsact_: putative ATP-binding cassette transporter; mll5770; phage(gi9964444)  3e-11  Click
10 4652345..4653340  PHAGE_Burkho_phi1026b: gp58; mlr5771; phage(gi38707948)  2e-16  Click
11 4654041..4654331  hypothetical protein; msr5773  N/A  Click
12 complement(4655085..4655393)  PROPHAGE_Xantho_33913: IS1404 transposase; mll5774; phage(gi21232568)  8e-15  Click
13 4655769..4656089  PHAGE_Roseop_DSS3P2: putative thioredoxin; mlr5775; phage(gi237651580)  1e-14  Click
14 4656273..4656845  hypothetical protein; mlr5776  N/A  Click
15 4656802..4656814  attR    TCCATGGCCGCAC  N/A  Click
16 complement(4656885..4658267)  PHAGE_Ectoca_1: EsV-1-112; mll5777; phage(gi13242583)  9e-08  Click
17 complement(4658254..4658931)  PHAGE_Ectoca_1: EsV-1-65; mll5778; phage(gi13242537)  5e-06  Click
Region 3, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 6592538..6593002  PHAGE_Pectob_ZF40: hypothetical protein; mlr8001; phage(gi422936680)  1e-33  Click
2 6592989..6594377  PHAGE_Entero_WV8: terminase, large subunit; mlr8003; phage(gi238801790)  1e-88  Click
3 6594386..6595756  PHAGE_Iodoba_phiPLPE: gp19 putative portal protein; mlr8004; phage(gi197085633)  2e-54  Click
4 complement(6595753..6595998)  hypothetical protein; msl8005  N/A  Click
5 6596025..6597173  PHAGE_Iodoba_phiPLPE: gp27 putative head protein; mlr8006; phage(gi197085641)  3e-47  Click
6 6597177..6597614  PHAGE_Vibrio_vB_VchM_138: hypothetical protein; mlr8007; phage(gi422936574)  8e-06  Click
7 6597563..6598582  PHAGE_Vibrio_CP_T1: putative major capsid protein; mlr8009; phage(gi418489228)  5e-37  Click
8 6598590..6598925  hypothetical protein; mlr8010  N/A  Click
9 6598931..6599416  PHAGE_Salico_CGphi29: hypothetical protein; mlr8011; phage(gi472340176)  4e-10  Click
10 6599388..6599780  PHAGE_Salico_CGphi29: hypothetical protein; mlr8012; phage(gi472340177)  8e-07  Click
11 6600341..6601381  PHAGE_Salico_CGphi29: hypothetical protein; mlr8013; phage(gi472340178)  6e-50  Click
12 6601333..6601830  PHAGE_Salico_CGphi29: hypothetical protein; mlr8014; phage(gi472340179)  1e-06  Click
13 6601832..6602245  PHAGE_Escher_HK639: hypothetical protein; mlr8015; phage(gi356870611)  2e-06  Click
14 6602297..6603031  PHAGE_Cyanop_S_TIM5: tail fiber protein; mlr8016; phage(gi422936163)  9e-10  Click
15 6603044..6603232  hypothetical protein; msr8017  N/A  Click
16 6603229..6603576  hypothetical protein; mlr8018  N/A  Click
17 6603660..6603812  hypothetical protein; msr8019  N/A  Click
18 6603822..6605399  PHAGE_Burkho_KL1: tail tape measure; mlr8020; phage(gi399528734)  2e-06  Click
19 6605495..6606919  PHAGE_Pseudo_F10: Putative tail length tape measure protein; mlr8022; phage(gi148912778)  2e-11  Click
20 6606923..6607678  hypothetical protein; mlr8023  N/A  Click
21 6607682..6608314  hypothetical protein; mlr8025  N/A  Click
22 6608323..6608727  PHAGE_Rhizob_3: p021; mlr8026; phage(gi195546552)  5e-08  Click
Region 4, total : 28 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 6975231..6975242  attL    TACACCCGCGCA  N/A  Click
2 complement(6975631..6976710)  PHAGE_Pseudo_D3: integrase; mll8495; phage(gi9635596)  2e-12  Click
3 complement(6976904..6977128)  hypothetical protein; msl8496  N/A  Click
4 complement(6977125..6977367)  hypothetical protein; msl8497  N/A  Click
5 complement(6977373..6977672)  hypothetical protein; msl8499  N/A  Click
6 complement(6978086..6978826)  PHAGE_Rhizob_3: C repressor protein; mll8500; phage(gi195546597)  8e-27  Click
7 complement(6978819..6979628)  hypothetical protein; mll8503  N/A  Click
8 complement(6979813..6980427)  hypothetical protein; mll8506  N/A  Click
9 6980550..6981731  PHAGE_Rhizob_3: p096; mlr8507; phage(gi195546626)  2e-21  Click
10 complement(6981734..6982429)  hypothetical protein; mll8511  N/A  Click
11 6982462..6982740  hypothetical protein; msr8509  N/A  Click
12 6982733..6983029  hypothetical protein; msr8510  N/A  Click
13 6983026..6983316  hypothetical protein; msr8512  N/A  Click
14 6983313..6983612  hypothetical protein; msr8514  N/A  Click
15 6983609..6984169  hypothetical protein; mlr8516  N/A  Click
16 6984118..6986121  PHAGE_Pseudo_F116: DNA cytosine methyltransferase; mlr8517; phage(gi56692910)  3e-117  Click
17 6986082..6987248  PHAGE_Pectob_ZF40: putative replication protein; mlr8518; phage(gi422936654)  3e-06  Click
18 6987355..6987903  PHAGE_Synech_S_CRM01: NusG antitermination factor; mlr8519; phage(gi333798264)  7e-05  Click
19 6987995..6988375  hypothetical protein; msr8735  N/A  Click
20 6988399..6988932  PHAGE_Rhodob_RcapNL: hypothetical protein; mlr8520; phage(gi461474960)  9e-10  Click
21 6988937..6990733  PHAGE_Burkho_Bcep176: gp79; mlr8521; phage(gi77864705)  4e-173  Click
22 6990808..6992040  PHAGE_Burkho_Bcep176: gp78; mlr8522; phage(gi77864704)  2e-47  Click
23 6992037..6992882  PHAGE_Burkho_Bcep176: gp77; mlr8523; phage(gi77864703)  3e-59  Click
24 6992897..6994300  PHAGE_Burkho_Bcep176: gp76; mlr8524; phage(gi77864702)  8e-83  Click
25 6994326..6994823  hypothetical protein; mlr8526  N/A  Click
26 6994874..6995170  hypothetical protein; msr8528  N/A  Click
27 6995182..6995835  PHAGE_Azospi_Cd: hypothetical protein APCd_gp37; mlr8529; phage(gi168495140)  1e-11  Click
28 6995840..6996232  hypothetical protein; mlr8530  N/A  Click
29 6996232..6996873  PHAGE_Azospi_Cd: hypothetical protein APCd_gp42; mlr8531; phage(gi168495145)  2e-12  Click
30 7011108..7011119  attR    TACACCCGCGCA  N/A  Click