Definition Vibrio cholerae O1 biovar El Tor str. N16961 chromosome I, complete genome.
Accession NC_002505
Length 2,961,149
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1546757..1548919)  PHAGE_Bacill_SPBc2: ABC transporter; VC1448; phage(gi9630145)  1e-46  Click
2 1549277..1549636  hypothetical protein; VC1449  N/A  Click
3 1549662..1550123  RTX toxin activating protein; VC1450  N/A  Click
4 1550108..1563784  PHAGE_Parame_1: hypothetical protein; VC1451; phage(gi340025714)  1e-21  Click
5 complement(1564152..1564376)  PHAGE_Vibrio_CTX: RstC; VC1452; phage(gi332672298)  1e-36  Click
6 complement(1564470..1564844)  PHAGE_Vibrio_CTX: RstB; VC1453; phage(gi332672297)  1e-69  Click
7 complement(1564822..1565901)  PHAGE_Vibrio_CTX: RstA; VC1454; phage(gi332672300)  0.0  Click
8 1566027..1566365  PHAGE_Vibrio_CTX: RstR; VC1455; phage(gi332672299)  2e-57  Click
9 complement(1566967..1567341)  PHAGE_Vibrio_CTX: CtxB; VC1456; phage(gi332672307)  7e-66  Click
10 complement(1567338..1568114)  PHAGE_Vibrio_CTX: CtxA; VC1457; phage(gi332672306)  3e-154  Click
11 complement(1568213..1569412)  PHAGE_Vibrio_CTX: Zot; VC1458; phage(gi332672305)  0.0  Click
12 complement(1569409..1569702)  PHAGE_Vibrio_CTX: Ace; VC1459; phage(gi332672304)  3e-51  Click
13 complement(1569699..1570982)  PHAGE_Vibrio_CTX: hypothetical protein; VC1460; phage(gi332672303)  0.0  Click
14 complement(1570993..1571241)  PHAGE_Vibrio_CTX: Cep; VC1461; phage(gi332672302)  8e-38  Click
15 complement(1571377..1571760)  PHAGE_Vibrio_CTX: RstB; VC1462; phage(gi332672301)  3e-71  Click
16 complement(1571738..1572817)  PHAGE_Vibrio_CTX: RstA; VC1463; phage(gi332672300)  0.0  Click
17 1572943..1573281  PHAGE_Vibrio_CTX: RstR; VC1464; phage(gi332672299)  2e-57  Click
18 complement(1573771..1574355)  hypothetical protein; VC1465  N/A  Click
19 complement(1574348..1574515)  hypothetical protein; VC1466  N/A  Click
20 complement(1574593..1575285)  hypothetical protein; VC1467  N/A  Click
21 complement(1575415..1575699)  hypothetical protein; VC1468  N/A  Click
22 complement(1575704..1577272)  PHAGE_Entero_Ike: G II protein; VC1469; phage(gi9626233)  6e-66  Click
Region 2, total : 15 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1935801..1936007)  PHAGE_Entero_P4: transcriptional regulator; VC1785; phage(gi9627517)  3e-09  Click
2 1936121..1936597  DNA repair protein RadC, putative; VC1786  N/A  Click
3 1936594..1936731  hypothetical protein; VC1787  N/A  Click
4 complement(1936827..1937522)  hypothetical protein; VC1788  N/A  Click
5 complement(1937519..1938391)  PHAGE_Entero_Sf6: putative transposase OrfB; VC1789; phage(gi41057343)  3e-115  Click
6 complement(1938388..1938732)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfA; VC1790; phage(gi24373865)  7e-08  Click
7 complement(1938739..1939779)  PHAGE_Escher_D108: tail assembly protein; VC1791; phage(gi281199687)  2e-27  Click
8 complement(1939914..1940273)  PHAGE_Entero_Mu: hypothetical protein Mup41; VC1792; phage(gi9633532)  2e-09  Click
9 complement(1940322..1940699)  hypothetical protein; VC1793  N/A  Click
10 complement(1940754..1941332)  hypothetical protein; VC1794  N/A  Click
11 complement(1941351..1941671)  transcriptional regulator, putative; VC1795  N/A  Click
12 complement(1941658..1942032)  PHAGE_Entero_Mu: Mor; VC1796; phage(gi9633507)  3e-07  Click
13 complement(1942842..1943303)  hypothetical protein; VC1797  N/A  Click
14 complement(1943306..1944457)  PHAGE_Pseudo_B3: putative transposase B subunit; VC1798; phage(gi56692579)  1e-45  Click
15 complement(1944387..1946144)  PHAGE_Pseudo_B3: putative transposase A subunit; VC1799; phage(gi56692580)  2e-93  Click