Definition Staphylococcus lugdunensis N920143 complete genome.
Accession FR870271
Length 2,595,888
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 316819..316830  attL    GTATCTTTTTTA  N/A  Click
2 317386..319365  PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; SLUG_02990; phage(gi9631364)  4e-08  Click
3 complement(319871..321877)  PHAGE_Staphy_vB_SauM_Romulus: tail lysin; SLUG_03000; phage(gi472437801)  1e-13  Click
4 322186..325023  PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; SLUG_03010; phage(gi9631364)  1e-10  Click
5 complement(325086..325574)  PHAGE_Helico_2: hypothetical protein; SLUG_03020; phage(gi370703021)  5e-06  Click
6 325915..326067  hypothetical protein; SLUG_03030  N/A  Click
7 complement(326137..326421)  YolD-like protein family protein; SLUG_03040  N/A  Click
8 326606..327709  PHAGE_Clostr_phiC2: putative integrase; SLUG_03050; phage(gi134287379)  2e-16  Click
9 327720..329792  PHAGE_Staphy_phi5967PVL: integrase; SLUG_03060; phage(gi431810245)  3e-06  Click
10 331375..331386  attR    GTATCTTTTTTA  N/A  Click
Region 2, total : 63 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 887270..887281  attL    CAAGAGCAACAA  N/A  Click
2 complement(887581..888963)  PHAGE_Staphy_TEM123: integrase; SLUG_08260; phage(gi388570325)  1e-103  Click
3 complement(889021..889569)  PHAGE_Staphy_TEM123: hypothetical protein; SLUG_08270; phage(gi388570324)  2e-21  Click
4 complement(889591..890100)  PHAGE_Staphy_TEM123: hypothetical protein; SLUG_08280; phage(gi388570323)  7e-16  Click
5 complement(890113..890577)  PHAGE_Staphy_PH15: conserved phage protein; SLUG_08290; phage(gi119967866)  4e-51  Click
6 complement(890592..890915)  PHAGE_Staphy_PH15: putative cI-like repressor; SLUG_08300; phage(gi119967867)  8e-46  Click
7 891036..891329  PHAGE_Staphy_PH15: putative Cro-like repressor; SLUG_08310; phage(gi119967868)  3e-31  Click
8 891344..892225  PHAGE_Bacill_IEBH: hypothetical protein IEBH_gp01; SLUG_08320; phage(gi197261597)  1e-45  Click
9 892238..892732  PHAGE_Strept_5093: hypothetical protein st5093phage_46; SLUG_08330; phage(gi238801926)  2e-16  Click
10 892771..892932  hypothetical phage protein; SLUG_08340  N/A  Click
11 complement(892938..893201)  PHAGE_Entero_phiFL3A: hypothetical protein; SLUG_08350; phage(gi281416218)  1e-06  Click
12 893259..894014  PHAGE_Staphy_55: ORF018; SLUG_08360; phage(gi66396131)  3e-137  Click
13 894030..894173  PHAGE_Staphy_EW: ORF133; SLUG_08370; phage(gi66395875)  1e-18  Click
14 complement(894183..894785)  PHAGE_Staphy_IPLA88: hypothetical protein SauSIPLA88_gp06; SLUG_08380; phage(gi215401176)  2e-101  Click
15 894836..894949  PHAGE_Staphy_PH15: hypothetical protein ph42; SLUG_08390; phage(gi119967874)  2e-08  Click
16 895013..895192  hypothetical phage protein; SLUG_08400  N/A  Click
17 895261..895746  PHAGE_Lister_2389: Gp46 protein; SLUG_08410; phage(gi17488551)  2e-31  Click
18 895747..896421  PHAGE_Staphy_vB_SepiS_phiIPLA7: erf superfamily protein; SLUG_08420; phage(gi399529156)  2e-113  Click
19 896418..896834  PHAGE_Staphy_phi5967PVL: ssDNA-binding protein; SLUG_08430; phage(gi431810257)  1e-52  Click
20 896849..897526  PHAGE_Staphy_PH15: conserved phage protein; SLUG_08440; phage(gi119967880)  4e-114  Click
21 897516..898319  PHAGE_Staphy_37: ORF012; SLUG_08450; phage(gi66395741)  9e-102  Click
22 898332..899117  PHAGE_Staphy_55: ORF016; SLUG_08460; phage(gi66396129)  2e-122  Click
23 899114..899278  PHAGE_Staphy_CN125: hypothetical protein CUR021; SLUG_08470; phage(gi239507382)  1e-11  Click
24 899268..899510  PHAGE_Staphy_StB20: hypothetical protein; SLUG_08480; phage(gi431809749)  6e-21  Click
25 899519..899926  PHAGE_Staphy_vB_SepiS_phiIPLA5: resolvase; SLUG_08490; phage(gi399528943)  2e-54  Click
26 899923..900237  hypothetical DNA-binding phage protein; SLUG_08500  N/A  Click
27 900335..900535  hypothetical phage protein; SLUG_08510  N/A  Click
28 900635..900757  PHAGE_Staphy_vB_SepiS_phiIPLA7: hypothetical protein; SLUG_08520; phage(gi399529167)  2e-12  Click
29 900761..901132  PHAGE_Staphy_vB_SepiS_phiIPLA7: hypothetical protein; SLUG_08530; phage(gi399529170)  3e-18  Click
30 901133..901414  PHAGE_Staphy_2: hypothetical protein SPTP3102_gp30; SLUG_08540; phage(gi156603979)  3e-10  Click
31 901404..901565  hypothetical phage protein; SLUG_08550  N/A  Click
32 901566..901991  PHAGE_Staphy_PH15: putative dUTP pyrophosphatase; SLUG_08560; phage(gi119967894)  1e-71  Click
33 902028..902180  hypothetical phage protein; SLUG_08570  N/A  Click
34 902170..902337  hypothetical phage protein; SLUG_08580  N/A  Click
35 902334..902477  PHAGE_Staphy_CNPH82: hypothetical protein cn64; SLUG_08590; phage(gi119953742)  2e-14  Click
36 902481..902882  PHAGE_Staphy_phiMR11: hypothetical protein; SLUG_08600; phage(gi162290146)  5e-51  Click
37 903091..903531  PHAGE_Strept_SMP: hypothetical protein; SLUG_08610; phage(gi119953776)  5e-27  Click
38 903518..904798  PHAGE_Staphy_TEM123: phage terminase large subunit; SLUG_08620; phage(gi388570349)  0.0  Click
39 904810..906339  PHAGE_Staphy_TEM123: phage portal protein; SLUG_08630; phage(gi388570348)  8e-149  Click
40 906346..907296  PHAGE_Staphy_StB27: minor head protein; SLUG_08640; phage(gi431809708)  2e-79  Click
41 907293..907445  hypothetical phage protein; SLUG_08650  N/A  Click
42 907826..908434  PHAGE_Staphy_TEM123: putative scaffold protein; SLUG_08660; phage(gi388570346)  2e-20  Click
43 908452..909372  PHAGE_Staphy_IPLA88: major head protein; SLUG_08670; phage(gi215401212)  2e-110  Click
44 909394..909663  hypothetical phage protein; SLUG_08680  N/A  Click
45 909665..909994  PHAGE_Staphy_TEM123: head-tail connector proteins; SLUG_08690; phage(gi388570344)  7e-27  Click
46 909991..910293  PHAGE_Staphy_phiETA2: hypothetical protein phiETA2_gp50; SLUG_08700; phage(gi122891764)  7e-21  Click
47 910295..910642  PHAGE_Staphy_phiNM: hypothetical protein SAPPV1_gp47; SLUG_08710; phage(gi118430771)  1e-27  Click
48 910654..911043  PHAGE_Staphy_IPLA88: hypothetical protein SauSIPLA88_gp46; SLUG_08720; phage(gi215401216)  2e-14  Click
49 911091..911645  PHAGE_Staphy_TEM123: major tail protein; SLUG_08730; phage(gi388570341)  9e-34  Click
50 911706..912065  PHAGE_Staphy_TEM123: hypothetical protein; SLUG_08740; phage(gi388570340)  2e-26  Click
51 912110..912454  PHAGE_Staphy_TEM123: hypothetical protein; SLUG_08750; phage(gi388570339)  5e-22  Click
52 912469..916002  PHAGE_Staphy_StB27: tail tape measure protein; SLUG_08760; phage(gi431809718)  0.0  Click
53 916014..916973  PHAGE_Staphy_TEM123: putative minor tail protein; SLUG_08770; phage(gi388570335)  1e-81  Click
54 916984..918219  PHAGE_Staphy_TEM123: phage minor structural protein; SLUG_08780; phage(gi388570334)  3e-77  Click
55 918220..920094  PHAGE_Staphy_StB27: Zn carboxypeptidase; SLUG_08790; phage(gi431809721)  0.0  Click
56 920108..921265  PHAGE_Staphy_StB27: tail protein; SLUG_08800; phage(gi431809722)  4e-112  Click
57 921281..921703  PHAGE_Staphy_StB20: hypothetical protein; SLUG_08810; phage(gi431809787)  3e-12  Click
58 921684..922082  hypothetical phage membrane protein; SLUG_08820  N/A  Click
59 922134..924023  PHAGE_Staphy_TEM123: cell wall hydrolase; SLUG_08830; phage(gi388570330)  0.0  Click
60 924077..926830  PHAGE_Staphy_StB27: tail protein; SLUG_08840; phage(gi431809725)  5e-78  Click
61 926887..927159  PHAGE_Staphy_vB_SepiS_phiIPLA7: holin; SLUG_08850; phage(gi399529144)  3e-38  Click
62 927159..928568  PHAGE_Staphy_phiETA2: amidase; SLUG_08860; phage(gi122891782)  0.0  Click
63 928763..929038  PHAGE_Staphy_P954: hypothetical protein; SLUG_08870; phage(gi257136424)  6e-09  Click
64 929035..929661  PHAGE_Staphy_P954: hypothetical protein; SLUG_08880; phage(gi257136425)  5e-43  Click
65 936704..936715  attR    CAAGAGCAACAA  N/A  Click