Definition Staphylococcus aureus subsp. aureus LGA251 complete genome sequence.
Accession FR821779
Length 2,750,834
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 849352..850377  PHAGE_Plankt_PaV_LD: ABC transporter; SARLGA251_07430; phage(gi371496158)  2e-30  Click
2 850370..851065  ABC transporter permease protein; SARLGA251_07440  N/A  Click
3 851083..851904  putative lipoprotein; SARLGA251_07450  N/A  Click
4 851970..851981  attL    AAAAAAAGGGCG  N/A  Click
5 complement(852047..853267)  PHAGE_Staphy_PT1028: ORF002; SARLGA251_07460; phage(gi66395166)  2e-103  Click
6 complement(853282..853983)  PHAGE_Staphy_PT1028: ORF006; SARLGA251_07470; phage(gi66395170)  2e-17  Click
7 854127..854339  PHAGE_Staphy_PT1028: ORF020; SARLGA251_07480; phage(gi66395184)  3e-18  Click
8 854340..854612  PHAGE_Staphy_PT1028: ORF019; SARLGA251_07490; phage(gi66395183)  2e-38  Click
9 854624..854770  pathogenicity island protein; SARLGA251_07500  N/A  Click
10 854763..854975  PHAGE_Staphy_phiMR25: hypothetical protein; SARLGA251_07510; phage(gi189427130)  7e-10  Click
11 854977..855336  pathogenicity island protein; SARLGA251_07520  N/A  Click
12 855337..855636  PHAGE_Staphy_PT1028: ORF016; SARLGA251_07530; phage(gi66395180)  1e-16  Click
13 855711..857324  PHAGE_Staphy_PT1028: ORF012; SARLGA251_07540; phage(gi66395176)  4e-69  Click
14 857495..858298  PHAGE_Staphy_PT1028: ORF004; SARLGA251_07550; phage(gi66395168)  1e-147  Click
15 858285..858557  PHAGE_Staphy_PT1028: ORF017; SARLGA251_07560; phage(gi66395181)  3e-41  Click
16 858559..859200  PHAGE_Staphy_PT1028: ORF008; SARLGA251_07570; phage(gi66395172)  3e-113  Click
17 859549..859890  PHAGE_Staphy_PT1028: ORF015; SARLGA251_07580; phage(gi66395179)  2e-61  Click
18 859904..860137  pathogenicity island protein; SARLGA251_07590  N/A  Click
19 860148..860669  PHAGE_Thysan_nucleopolyhedrovirus: hypothetical protein; SARLGA251_07600; phage(gi438000368)  5e-06  Click
20 860759..861286  PHAGE_Staphy_PT1028: ORF010; SARLGA251_07610; phage(gi66395174)  4e-91  Click
21 861289..861630  PHAGE_Staphy_PT1028: ORF014; SARLGA251_07620; phage(gi66395178)  3e-55  Click
22 861627..862196  PHAGE_Staphy_PT1028: ORF009; SARLGA251_07630; phage(gi66395173)  2e-103  Click
23 865191..865202  attR    AAAAAAAGGGCG  N/A  Click
Region 2, total : 61 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 873308..873335  attL    GAAATGGCTATTGATACCATTTTGATAC  N/A  Click
2 complement(873339..874388)  PHAGE_Staphy_phiETA3: integrase; SARLGA251_07760; phage(gi122891785)  0.0  Click
3 complement(874637..875542)  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp03; SARLGA251_07770; phage(gi122891787)  8e-173  Click
4 complement(875574..876212)  PHAGE_Staphy_26: phage repressor protein; SARLGA251_07780; phage(gi304443270)  4e-117  Click
5 876404..876658  PHAGE_Staphy_IPLA88: cro; SARLGA251_07790; phage(gi215401175)  2e-43  Click
6 876674..876841  PHAGE_Staphy_X2: ORF102; SARLGA251_07800; phage(gi66394736)  3e-23  Click
7 complement(876892..877374)  PHAGE_Staphy_phiETA: hypothetical protein phiETA_09; SARLGA251_07810; phage(gi17426237)  9e-87  Click
8 878007..878756  PHAGE_Staphy_71: ORF017; SARLGA251_07820; phage(gi66396057)  1e-138  Click
9 complement(878943..879188)  PHAGE_Staphy_85: ORF067; SARLGA251_07830; phage(gi66394924)  3e-09  Click
10 879259..879489  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp11; SARLGA251_07840; phage(gi122891795)  3e-33  Click
11 879736..879996  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp14; SARLGA251_07850; phage(gi122891798)  1e-45  Click
12 880010..880489  PHAGE_Staphy_42E: ORF027; SARLGA251_07860; phage(gi66395535)  6e-85  Click
13 880489..881127  PHAGE_Staphy_42E: ORF020; SARLGA251_07870; phage(gi66395528)  2e-118  Click
14 881127..881552  PHAGE_Staphy_42E: ORF032; SARLGA251_07880; phage(gi66395540)  8e-75  Click
15 881566..882240  PHAGE_Staphy_X2: ORF017; SARLGA251_07890; phage(gi66394687)  1e-123  Click
16 882233..882985  PHAGE_Staphy_IPLA88: hypothetical protein SauSIPLA88_gp17; SARLGA251_07900; phage(gi215401187)  2e-124  Click
17 882985..883341  PHAGE_Staphy_IPLA88: hypothetical protein SauSIPLA88_gp18; SARLGA251_07910; phage(gi215401188)  9e-66  Click
18 883338..884579  PHAGE_Staphy_X2: ORF010; SARLGA251_07920; phage(gi66394680)  0.0  Click
19 884576..884791  PHAGE_Staphy_phiMR11: hypothetical protein; SARLGA251_07930; phage(gi162290127)  2e-36  Click
20 884794..885015  PHAGE_Staphy_phiETA: hypothetical protein phiETA_24; SARLGA251_07940; phage(gi17426252)  2e-37  Click
21 885025..885429  PHAGE_Staphy_77: 77ORF028; SARLGA251_07950; phage(gi41189541)  3e-74  Click
22 885434..885619  PHAGE_Staphy_X2: ORF088; SARLGA251_07960; phage(gi66394732)  5e-30  Click
23 885620..886237  PHAGE_Staphy_92: ORF023; SARLGA251_07970; phage(gi66396429)  1e-108  Click
24 886238..886486  PHAGE_Staphy_42E: ORF064; SARLGA251_07980; phage(gi66395564)  4e-43  Click
25 886497..886880  PHAGE_Staphy_80alpha: hypothetical protein SPV-80A_gp28; SARLGA251_07990; phage(gi148717870)  1e-35  Click
26 886877..887071  PHAGE_Staphy_187: ORF083; SARLGA251_08000; phage(gi66395276)  5e-29  Click
27 887068..887352  PHAGE_Staphy_phiETA: hypothetical protein phiETA_31; SARLGA251_08010; phage(gi17426259)  1e-46  Click
28 887345..887593  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp32; SARLGA251_08020; phage(gi122891816)  1e-37  Click
29 887586..888098  PHAGE_Staphy_80alpha: dUTPase; SARLGA251_08030; phage(gi148717874)  8e-90  Click
30 888135..888341  PHAGE_Staphy_42E: ORF081; SARLGA251_08040; phage(gi66395571)  2e-32  Click
31 888338..888511  PHAGE_Staphy_phiETA3: transcriptional activator RinB; SARLGA251_08050; phage(gi122891821)  1e-24  Click
32 888512..888658  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp38; SARLGA251_08060; phage(gi122891822)  6e-20  Click
33 888682..889104  PHAGE_Staphy_phiETA3: transcriptional activator RinA; SARLGA251_08070; phage(gi122891823)  4e-77  Click
34 889436..889930  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp40; SARLGA251_08080; phage(gi122891824)  1e-79  Click
35 889923..891146  PHAGE_Staphy_phiETA3: large terminase; SARLGA251_08090; phage(gi122891825)  0.0  Click
36 891149..892567  PHAGE_Staphy_phiETA3: portal protein; SARLGA251_08100; phage(gi122891826)  0.0  Click
37 892536..893486  PHAGE_Staphy_phiETA3: minor head protein; SARLGA251_08110; phage(gi122891827)  9e-176  Click
38 893582..894166  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp45; SARLGA251_08120; phage(gi122891829)  7e-102  Click
39 894183..895097  PHAGE_Staphy_phiETA3: major capsid protein; SARLGA251_08130; phage(gi122891830)  6e-166  Click
40 895106..895252  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp47; SARLGA251_08140; phage(gi122891831)  6e-20  Click
41 895258..895608  PHAGE_Staphy_phiETA3: head completion protein; SARLGA251_08150; phage(gi122891832)  8e-63  Click
42 895620..895955  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp49; SARLGA251_08160; phage(gi122891833)  2e-59  Click
43 895906..896355  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp50; SARLGA251_08170; phage(gi122891834)  1e-83  Click
44 896368..896793  PHAGE_Staphy_phiETA3: tail protein; SARLGA251_08180; phage(gi122891835)  2e-77  Click
45 896794..897351  PHAGE_Staphy_phiETA3: major tail protein; SARLGA251_08190; phage(gi122891836)  7e-98  Click
46 897418..897930  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp53; SARLGA251_08200; phage(gi122891837)  2e-84  Click
47 898110..898259  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp54; SARLGA251_08210; phage(gi122891838)  4e-19  Click
48 898263..901148  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp55; SARLGA251_08220; phage(gi122891839)  0.0  Click
49 901163..902104  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp56; SARLGA251_08230; phage(gi122891840)  8e-179  Click
50 902115..904001  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp57; SARLGA251_08240; phage(gi122891841)  0.0  Click
51 904014..905912  PHAGE_Staphy_X2: ORF003; SARLGA251_08250; phage(gi66394673)  0.0  Click
52 905912..907735  PHAGE_Staphy_IPLA88: tail protein; SARLGA251_08260; phage(gi215401224)  0.0  Click
53 907735..908121  PHAGE_Staphy_IPLA88: hypothetical protein SauSIPLA88_gp55; SARLGA251_08270; phage(gi215401225)  8e-52  Click
54 908114..908290  PHAGE_Staphy_42E: ORF097; SARLGA251_08280; phage(gi66395575)  7e-21  Click
55 908330..908635  PHAGE_Staphy_phiETA3: hypothetical protein phiETA3_gp62; SARLGA251_08290; phage(gi122891846)  1e-31  Click
56 908772..910646  PHAGE_Staphy_X2: ORF005; SARLGA251_08300; phage(gi66394675)  0.0  Click
57 910659..913253  PHAGE_Staphy_IPLA88: putative tail fiber protein; SARLGA251_08310; phage(gi215401229)  6e-81  Click
58 913309..913746  PHAGE_Staphy_IPLA88: putative holin; SARLGA251_08320; phage(gi215401230)  3e-77  Click
59 913727..915172  PHAGE_Staphy_IPLA88: endolysin; SARLGA251_08330; phage(gi215401231)  0.0  Click
60 916071..916250  PHAGE_Staphy_P954: hypothetical protein; SARLGA251_08340; phage(gi257136424)  1e-22  Click
61 916272..916799  PHAGE_Lister_B025: gp27; SARLGA251_08350; phage(gi157325244)  4e-36  Click
62 916789..917187  PHAGE_Lister_B025: gp28; SARLGA251_08360; phage(gi157325245)  5e-20  Click
63 917480..917507  attR    GAAATGGCTATTGATACCATTTTGATAC  N/A  Click