Definition Haemophilus influenzae 10810 genome.
Accession FQ312006
Length 1,981,535
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 42 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 372081..372093  attL    AACCTAAACTTGA  N/A  Click
2 complement(374746..375156)  PROPHAGE_Escher_Sakai: putative minor tail protein U; HIB_03510; phage(gi15832207)  3e-10  Click
3 complement(375165..375695)  PHAGE_Entero_mEp237: minor tail protein Z; HIB_03520; phage(gi435439275)  1e-31  Click
4 complement(375698..376009)  putative uncharacterized protein; HIB_03530  N/A  Click
5 complement(375990..376313)  PHAGE_Entero_mEp460: hypothetical protein; HIB_03540; phage(gi428782322)  6e-17  Click
6 complement(376392..378380)  PHAGE_Gifsy_2: bacteriophage Clp protease involved in capsid processing; HIB_03550; phage(gi169257302)  0.0  Click
7 complement(378591..380105)  PHAGE_Gifsy_2: bacteriophage portal protein; HIB_03560; phage(gi169257301)  4e-165  Click
8 complement(380109..380330)  putative uncharacterized protein; HIB_03570  N/A  Click
9 complement(380369..380512)  putative uncharacterized protein fragment; HIB_03580  N/A  Click
10 complement(380499..380885)  PHAGE_Escher_HK639: rha protein; HIB_03590; phage(gi356870673)  3e-22  Click
11 complement(381009..383129)  PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, large subunit; HIB_03600; phage(gi169257299)  0.0  Click
12 complement(383132..383605)  PHAGE_Entero_mEp213: terminase small subunit; HIB_03610; phage(gi428782590)  3e-41  Click
13 complement(383875..384156)  PHAGE_Haemop_Aaphi23: putative lytic protein Rz1; HIB_03620; phage(gi44829137)  1e-32  Click
14 complement(384068..384403)  PHAGE_Haemop_Aaphi23: putative lytic protein Rz; HIB_03630; phage(gi31544026)  5e-32  Click
15 complement(384376..384918)  PHAGE_Mannhe_phiMHaA1: endolysin; predicted; phage lysozyme; HIB_03640(gi109289945)  1e-46  Click
16 complement(384899..385150)  hypothetical protein; HIB_03650  N/A  Click
17 385256..385834  putative uncharacterized protein; HIB_03660  N/A  Click
18 complement(386030..386920)  PHAGE_Salmon_epsilon34: Ant; HIB_03670; phage(gi221328691)  4e-63  Click
19 complement(387235..387756)  putative uncharacterized protein; HIB_03680  N/A  Click
20 complement(387934..388128)  PHAGE_Haemop_Aaphi23: putative anti-termination protein Q; HIB_03690; phage(gi31544020)  1e-13  Click
21 complement(388304..388858)  PHAGE_Haemop_Aaphi23: putative recombination protein NinG; HIB_03700; phage(gi31544019)  9e-45  Click
22 complement(388861..389064)  PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p19b; HIB_03710; phage(gi45862228)  4e-06  Click
23 complement(389144..389560)  PHAGE_Haemop_Aaphi23: putative recombination protein NinB; HIB_03720; phage(gi31544018)  6e-61  Click
24 complement(389561..390484)  putative uncharacterised type i restriction-modification system related protein; HIB_03730  N/A  Click
25 complement(390481..390705)  hypothetical protein; HIB_03740  N/A  Click
26 complement(390702..392075)  PHAGE_Salmon_vB_SemP_Emek: DnaB helicase; HIB_03750; phage(gi399498841)  1e-83  Click
27 complement(392072..392899)  PHAGE_Haemop_Aaphi23: putative DNA replication protein O; HIB_03760; phage(gi31544014)  3e-82  Click
28 complement(392896..393054)  PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p15a; HIB_03770; phage(gi45862226)  3e-07  Click
29 complement(393056..393298)  PHAGE_Sulfit_pCB2047_C: hypothetical protein; HIB_03780; phage(gi472341794)  6e-07  Click
30 complement(393367..393810)  PHAGE_Entero_mEp390: hypothetical protein; HIB_03790; phage(gi428782704)  1e-16  Click
31 complement(393865..394047)  PHAGE_Salmon_vB_SemP_Emek: Cro; HIB_03800; phage(gi399498837)  2e-13  Click
32 394152..394811  PHAGE_Entero_IME10: repressor protein; HIB_03810; phage(gi422934295)  2e-32  Click
33 394857..395294  N/A; HIB_03820  0  Click
34 395284..395805  N/A; HIB_03830  0  Click
35 396792..397109  subname: full=putative uncharacterized protein; HIB_03840  N/A  Click
36 397109..397603  N/A; HIB_03850  0  Click
37 397587..397880  N/A; HIB_03860  0  Click
38 397892..398803  PHAGE_Psychr_pOW20_A: recombinase; HIB_03870; phage(gi472339794)  8e-57  Click
39 398898..399398  N/A; HIB_03880  0  Click
40 399454..399810  PHAGE_Staphy_3A: ORF031; HIB_03890; phage(gi66395619)  2e-08  Click
41 399901..400692  subname: full=putative uncharacterized protein; HIB_03900  N/A  Click
42 400953..401570  PHAGE_Salmon_vB_SemP_Emek: antirepressor; HIB_03910; phage(gi399498814)  2e-15  Click
43 402006..403049  PHAGE_Haemop_Aaphi23: putative integrase; predicted; phage integrase; HIB_03920(gi62912537)  0.0  Click
44 410198..410210  attR    AACCTAAACTTGA  N/A  Click
Region 2, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 561971..561992  attL    TTAGTAACCAAAATAGTAACCA  N/A  Click
2 562036..563262  PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; integrase;; phage HIB_05550(gi16130540)  4e-75  Click
3 complement(563434..565203)  PHAGE_Entero_P4: DNA primase; HIB_05560; phage(gi9627512)  5e-77  Click
4 complement(565232..565582)  subname: full=putative uncharacterized protein; HIB_05570  N/A  Click
5 complement(565575..566213)  subname: full=putative uncharacterized protein; HIB_05580  N/A  Click
6 complement(566200..566406)  subname: full=putative uncharacterized protein; HIB_05590  N/A  Click
7 complement(566396..566596)  subname: full=putative uncharacterized protein; HIB_05600  N/A  Click
8 complement(566586..566957)  subname: full=putative uncharacterized protein; HIB_05610  N/A  Click
9 complement(566950..567879)  subname: full=putative uncharacterized protein; HIB_05620  N/A  Click
10 complement(568046..568357)  subname: full=putative uncharacterized protein; HIB_05630  N/A  Click
11 complement(568369..568578)  subname: full=putative regulatory protein, alpa family; HIB_05640  N/A  Click
12 complement(568751..569731)  subname: full=putative uncharacterized protein; HIB_05650  N/A  Click
13 complement(569810..570196)  subname: full=putative uncharacterized protein; subname: full=putative uncharacterized protein; HIB_05660  N/A  Click
14 complement(570437..570721)  subname: full=putative uncharacterized protein; HIB_05670  N/A  Click
15 complement(570718..572385)  PHAGE_Geobac_E2: putative terminase large subunit; HIB_05680; phage(gi148747729)  6e-88  Click
16 complement(572392..572760)  PHAGE_Salmon_ST64B: terminase small subunit; HIB_05690; phage(gi23505446)  1e-11  Click
17 complement(572957..573343)  PHAGE_Bacill_phi105: hypothetical protein phi105_50; HIB_05700; phage(gi22855043)  3e-23  Click
18 complement(573358..573672)  subname: full=putative uncharacterized protein; HIB_05710  N/A  Click
19 complement(573659..573967)  PHAGE_Geobac_E2: putative head-tail adaptor; HIB_05720; phage(gi148747735)  1e-11  Click
20 complement(573987..575177)  PHAGE_Yersin_PY54: portal protein; HIB_05730; phage(gi33770511)  4e-51  Click
21 complement(575221..575787)  PHAGE_Entero_EFRM31: prohead protease; HIB_05740; phage(gi327198114)  5e-27  Click
22 complement(575841..577028)  PHAGE_Entero_phiP27: putative major capsid protein; HIB_05750; phage(gi18249904)  1e-59  Click
23 577394..577415  attR    TTAGTAACCAAAATAGTAACCA  N/A  Click
Region 3, total : 54 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1644619..1644632  attL    TGGTGCCTAGGGTC  N/A  Click
2 complement(1645018..1645245)  PHAGE_Aggreg_S1249: putative tail fiber assembly protein; HIB_15740; phage(gi273809545)  4e-17  Click
3 complement(1645251..1646471)  PHAGE_Haemop_HP2: tail fibers; HIB_15750; phage(gi17981847)  1e-49  Click
4 complement(1646503..1647078)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15760; phage(gi273809547)  5e-89  Click
5 complement(1647078..1647587)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15770; phage(gi273809548)  7e-77  Click
6 complement(1647639..1648136)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15780; phage(gi273809548)  2e-78  Click
7 complement(1648317..1648670)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15790; phage(gi273809549)  8e-57  Click
8 complement(1648667..1649311)  PHAGE_Aggreg_S1249: putative baseplate protein; HIB_15800; phage(gi273809550)  4e-99  Click
9 complement(1649308..1650180)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15810; phage(gi273809551)  5e-143  Click
10 complement(1650457..1650765)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15820; phage(gi273809553)  1e-45  Click
11 complement(1650771..1651547)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15830; phage(gi273809554)  2e-94  Click
12 complement(1651553..1653643)  PHAGE_Aggreg_S1249: putative tail length tape measure protein; HIB_15840; phage(gi273809555)  0.0  Click
13 complement(1653794..1654204)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15850; phage(gi273809556)  6e-53  Click
14 complement(1654233..1654604)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15860; phage(gi273809557)  1e-47  Click
15 complement(1654655..1656163)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15870; phage(gi273809558)  0.0  Click
16 complement(1656168..1656608)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15880; phage(gi273809559)  5e-60  Click
17 complement(1656595..1656966)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15890; phage(gi273809560)  1e-46  Click
18 complement(1656963..1657409)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15900; phage(gi273809561)  2e-56  Click
19 complement(1657410..1657772)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15910; phage(gi273809562)  4e-37  Click
20 complement(1657782..1658696)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15920; phage(gi273809563)  7e-154  Click
21 complement(1658706..1659146)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15930; phage(gi273809564)  3e-51  Click
22 complement(1659303..1660259)  PHAGE_Aggreg_S1249: hypothetical protein; HIB_15940; phage(gi273809565)  2e-149  Click
23 complement(1660349..1661782)  PHAGE_Aggreg_S1249: putative minor head protein; HIB_15950; phage(gi273809568)  3e-89  Click
24 complement(1661811..1663142)  PHAGE_Aggreg_S1249: phage-related protein HI1409; HIB_15960; phage(gi273809569)  0.0  Click
25 complement(1663144..1664487)  PHAGE_Psychr_pOW20_A: phage terminase large subunit; HIB_15970; phage(gi472339822)  4e-97  Click
26 complement(1664474..1664986)  PHAGE_Acinet_AP22: putative phage terminase small subunit; HIB_15980; phage(gi388570782)  8e-23  Click
27 1665063..1665314  N/A; HIB_15990  0  Click
28 1665298..1665645  PHAGE_Burkho_phiE125: putative helix-turn-helix transcriptional regulator; HIB_16000; phage(gi17975230)  7e-06  Click
29 complement(1665647..1665859)  PHAGE_Aggreg_S1249: putative lytic protein Rz1; HIB_16010; phage(gi273809573)  1e-27  Click
30 complement(1665840..1666145)  PHAGE_Aggreg_S1249: putative lytic protein Rz; HIB_16020; phage(gi273809574)  4e-25  Click
31 complement(1666156..1666758)  PHAGE_Aggreg_S1249: putative Lys protein; HIB_16030; phage(gi273809575)  1e-57  Click
32 complement(1666727..1667083)  PHAGE_Aeromo_phiO18P: putative holin; HIB_16040; phage(gi148727161)  1e-05  Click
33 complement(1667207..1667344)  N/A; HIB_16050  0  Click
34 complement(1667419..1668096)  PHAGE_Aggreg_S1249: putative antirepressor protein Ant; HIB_16060; phage(gi273809579)  8e-49  Click
35 1668458..1668763  PHAGE_Burkho_2: gp7, putative addiction module killer protein; HIB_16070; phage(gi134288691)  5e-21  Click
36 1668760..1669053  PHAGE_Burkho_2: gp6, putative addiction module antidote protein; HIB_16080; phage(gi134288715)  2e-16  Click
37 complement(1669085..1669453)  PHAGE_Aggreg_S1249: putative anti-termination protein Q; HIB_16090; phage(gi273809580)  2e-38  Click
38 complement(1669455..1670009)  PHAGE_Aggreg_S1249: NinG recombination protein; HIB_16100; phage(gi273809581)  1e-83  Click
39 complement(1670012..1670215)  PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p19b; HIB_16110; phage(gi45862228)  4e-06  Click
40 complement(1670295..1670711)  PHAGE_Aggreg_S1249: putative recombination protein NinB; HIB_16120; phage(gi273809585)  6e-61  Click
41 complement(1670748..1670972)  N/A; HIB_16130  0  Click
42 complement(1670969..1671595)  PHAGE_Stx2_c_I: P protein; HIB_16140; phage(gi20065922)  2e-16  Click
43 complement(1671592..1672272)  PHAGE_Aggreg_S1249: replication protein; HIB_16150; phage(gi273809588)  2e-66  Click
44 complement(1672269..1672889)  PHAGE_Aggreg_S1249: uncharacterized phage-encoded protein; HIB_16160; phage(gi273809589)  6e-54  Click
45 1672968..1673234  PHAGE_Aggreg_S1249: uncharacterized phage-encoded protein; HIB_16170; phage(gi273809589)  2e-28  Click
46 1673231..1673398  PHAGE_Aggreg_S1249: replication protein; HIB_16180; phage(gi273809588)  9e-21  Click
47 complement(1673451..1673747)  PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p14; HIB_16190; phage(gi31544012)  3e-34  Click
48 1674114..1674779  PHAGE_Stx2_c_I: CI protein; HIB_16200; phage(gi20065916)  9e-22  Click
49 1674813..1675586  N/A; HIB_16210  0  Click
50 1675583..1676398  N/A; HIB_16220  0  Click
51 complement(1676891..1677064)  PHAGE_Mycoba_Troll4: gp41; HIB_16240; phage(gi206599836)  2e-09  Click
52 1677078..1677287  hypothetical protein; HIB_16250  N/A  Click
53 1677814..1678101  N/A; HIB_16260  0  Click
54 1678405..1678734  N/A; HIB_16270  0  Click
55 complement(1679234..1679656)  PHAGE_Mannhe_phiMHaA1: integrase; HIB_16280; phage(gi109289985)  2e-16  Click
56 1679868..1679881  attR    TGGTGCCTAGGGTC  N/A  Click
Region 4, total : 23 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1763182..1764267)  PHAGE_Pseudo_73: hypothetical protein ORF037; HIB_17190; phage(gi148912865)  2e-09  Click
2 complement(1764374..1764511)  N/A; HIB_17200  0  Click
3 complement(1764785..1765321)  conserved protein; HIB_17210  N/A  Click
4 complement(1765692..1766192)  PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; HIB_17220; phage(gi418489075)  1e-53  Click
5 complement(1766189..1766791)  PHAGE_Haemop_HP2: tail collar; HIB_17230; phage(gi17981848)  1e-97  Click
6 complement(1766803..1767960)  PHAGE_Haemop_HP2: tail fibers; HIB_17240; phage(gi17981847)  2e-162  Click
7 complement(1767941..1768900)  PHAGE_Haemop_SuMu: putative phage-related tail fiber protein; HIB_17250; phage(gi418489073)  3e-14  Click
8 complement(1768904..1769497)  PHAGE_Haemop_SuMu: hypothetical protein; HIB_17260; phage(gi418489072)  5e-67  Click
9 complement(1769497..1770561)  PHAGE_Haemop_SuMu: baseplate J family protein gp47; HIB_17270; phage(gi418489071)  5e-131  Click
10 complement(1770576..1770926)  PHAGE_Haemop_SuMu: Mu bacteriophage protein gp46; HIB_17280; phage(gi418489070)  2e-43  Click
11 complement(1770996..1771631)  PHAGE_Haemop_SuMu: phage-related baseplate assembly protein gp45; HIB_17290; phage(gi418489069)  5e-74  Click
12 complement(1771641..1772765)  PHAGE_Haemop_SuMu: Mu-like prophage tail protein gpP; HIB_17300; phage(gi418489068)  7e-149  Click
13 complement(1772755..1774092)  PHAGE_Haemop_SuMu: DNA circulation protein; HIB_17310; phage(gi418489067)  2e-108  Click
14 complement(1774096..1774962)  PHAGE_Haemop_SuMu: bacteriophage tail length determination protein; HIB_17320; phage(gi418489066)  1e-24  Click
15 complement(1775000..1775368)  PHAGE_Haemop_SuMu: bacteriophage tail length determination protein; HIB_17330; phage(gi418489066)  8e-09  Click
16 1775672..1776859  PROPHAGE_Xantho_33913: ISxcc1 transposase; predicted; phage DNA-binding transcriptional regulator; HIB_17340(gi21232565)  7e-16  Click
17 complement(1776948..1777298)  N/A; HIB_17350  0  Click
18 1777333..1777485  PHAGE_Aggreg_S1249: replication protein; HIB_17360; phage(gi273809588)  4e-18  Click
19 complement(1777538..1777834)  PHAGE_Haemop_Aaphi23: hypothetical protein Aaphi23p14; HIB_17370; phage(gi31544012)  3e-34  Click
20 1778201..1778866  PHAGE_Stx2_c_I: CI protein; HIB_17380; phage(gi20065916)  9e-22  Click
21 1778900..1779673  N/A; HIB_17390  0  Click
22 1779670..1780485  N/A; HIB_17400  0  Click
23 complement(1780978..1781151)  PHAGE_Mycoba_Troll4: gp41; HIB_17410; phage(gi206599836)  2e-09  Click