| Definition | Salmonella enterica subsp. enterica serovar Typhimurium SL1344 genome. |
|---|---|
| Accession | FQ312003 |
| Length | 4,878,012 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 9 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 960464..960477 | attL TTTCCGCCAGCTCA | N/A | Click |
| 2 | 972397..974055 | PHAGE_Entero_P2: Old; SL1344_0878; phage(gi9630369) | 8e-06 | Click |
| 3 | complement(974052..975020) | putative virK protein; SL1344_0879 | N/A | Click |
| 4 | 975148..976266 | PHAGE_Cronob_ENT47670: putative tail protein; SL1344_0880; phage(gi431810494) | 4e-05 | Click |
| 5 | 976263..978209 | PHAGE_Plankt_PaV_LD: ABC transporter; SL1344_0881; phage(gi371496158) | 5e-41 | Click |
| 6 | complement(978339..978560) | PHAGE_Lactoc_bIL312: Csp; SL1344_0882; phage(gi13095918) | 5e-14 | Click |
| 7 | 978884..979204 | PHAGE_Cronob_vB_CsaM_GAP32: ATP-dependent Clp protease; SL1344_0883; phage(gi414087232) | 3e-05 | Click |
| 8 | 979235..981511 | PROPHAGE_Escher_EDL933: ATP-dependent Clp protease ATP-binding subunit; SL1344_0884; phage(gi15800640) | 0.0 | Click |
| 9 | 981703..982161 | PHAGE_Hypert_2: IS element Dka2 orfA; SL1344_0885; phage(gi300116744) | 4e-16 | Click |
| 10 | complement(982624..983307) | PROPHAGE_Escher_CFT073: transposase insF; SL1344_0886; phage(gi26249410) | 1e-31 | Click |
| 11 | 990619..990632 | attR TTTCCGCCAGCTCA | N/A | Click |
Region 2, total : 53 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1054746..1054760 | attL TTATAAAAATGTAGC | N/A | Click |
| 2 | complement(1054795..1056087) | PHAGE_Gifsy_2: bacteriophage integrase; SL1344_0942; phage(gi169257268) | 0.0 | Click |
| 3 | complement(1056132..1056380) | PHAGE_Gifsy_2: bacteriophage excisionase; SL1344_0943; phage(gi169257269) | 1e-43 | Click |
| 4 | complement(1056421..1056660) | PHAGE_Gifsy_2: hypothetical protein STM1007.Gifsy2; SL1344_0944; phage(gi169257270) | 7e-40 | Click |
| 5 | complement(1056703..1057812) | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SL1344_0945; phage(gi169257271) | 0.0 | Click |
| 6 | complement(1057823..1060708) | PHAGE_Gifsy_2: putatitive bacteriophage exodeoxyribonuclease VIII; SL1344_0946; phage(gi169257272) | 0.0 | Click |
| 7 | complement(1060835..1061134) | PHAGE_Gifsy_2: hypothetical protein STM1010.Gifsy2; SL1344_0947; phage(gi169257273) | 3e-40 | Click |
| 8 | complement(1061156..1061314) | PHAGE_Gifsy_2: hypothetical protein STM1010.1n.Gifsy2; SL1344_0948; phage(gi169257274) | 1e-25 | Click |
| 9 | complement(1061307..1061567) | PHAGE_Gifsy_2: hypothetical protein STM1010.2n.Gifsy2; SL1344_0949; phage(gi169257275) | 2e-15 | Click |
| 10 | complement(1061617..1061958) | PHAGE_Gifsy_2: putative bacteriophage regulatory protein; repressor; Lambda gpCI analog; SL1344_0950; phage(gi169257276) | 2e-59 | Click |
| 11 | 1062352..1062726 | PHAGE_Gifsy_2: bacteriophage transcriptional activator; Lambda gpCII analog; SL1344_0951; phage(gi169257278) | 1e-54 | Click |
| 12 | 1062811..1063794 | PHAGE_Gifsy_2: bacteriophage DNA replication protein; Lambda gpo homolog; SL1344_0952; phage(gi169257279) | 0.0 | Click |
| 13 | 1063797..1064546 | PHAGE_Gifsy_2: bacteriophage DNA replication protein; SL1344_0953; phage(gi169257280) | 1e-141 | Click |
| 14 | 1064557..1064904 | PHAGE_Gifsy_2: hypothetical protein STM1016.Gifsy2; SL1344_0954; phage(gi169257281) | 5e-60 | Click |
| 15 | 1064901..1065212 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SL1344_0955; phage(gi169257282) | 7e-53 | Click |
| 16 | 1065290..1065580 | PHAGE_Gifsy_2: hypothetical protein STM1019.1n.Gifsy2; SL1344_0956; phage(gi169257283) | 8e-47 | Click |
| 17 | 1065872..1066105 | PHAGE_Gifsy_2: bacteriophage damage-inducible protein DinI; SL1344_0957; phage(gi169257284) | 8e-39 | Click |
| 18 | 1066521..1067123 | PHAGE_Gifsy_2: hypothetical protein STM1020.Gifsy2; SL1344_0958; phage(gi169257286) | 3e-111 | Click |
| 19 | 1067332..1067943 | PHAGE_Gifsy_2: NinG; SL1344_0959; phage(gi169257288) | 1e-116 | Click |
| 20 | 1067940..1068086 | PHAGE_Gifsy_2: hypothetical protein STM1022.1n.Gifsy2; SL1344_0960; phage(gi169257289) | 5e-22 | Click |
| 21 | 1068076..1068873 | PHAGE_Gifsy_2: prophage antitermination protein; late gene regulator; Lamba gpQ homolog; SL1344_0961; phage(gi169257290) | 7e-155 | Click |
| 22 | 1068940..1069257 | PHAGE_Gifsy_2: hypothetical protein STM1023.Gifsy2; SL1344_0962; phage(gi169257291) | 1e-58 | Click |
| 23 | 1069431..1069556 | PHAGE_Gifsy_2: hypothetical protein STM1024.Gifsy2; SL1344_0963; phage(gi169257292) | 1e-17 | Click |
| 24 | complement(1069692..1070141) | PHAGE_Gifsy_2: hypothetical protein STM1025.Gifsy2; SL1344_0964; phage(gi169257293) | 6e-84 | Click |
| 25 | complement(1070502..1071188) | PHAGE_Gifsy_2: bacteriophage virulence determinant; GtgA; SL1344_0965; phage(gi169257294) | 2e-134 | Click |
| 26 | 1071458..1071793 | PHAGE_Gifsy_2: bacteriophage lysis protein; holin; SL1344_0965A; phage(gi169257295) | 3e-59 | Click |
| 27 | 1071777..1072229 | PHAGE_Gifsy_2: bacteriophage lysis protein; endolysin; lysozyme; SL1344_0966; phage(gi169257296) | 2e-83 | Click |
| 28 | 1072226..1072726 | PHAGE_Gifsy_2: bacteriophage lysis protein; Lambda gpRz homolog; SL1344_0967; phage(gi169257297) | 1e-86 | Click |
| 29 | 1072934..1073467 | PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, small subunit; SL1344_0968; phage(gi169257298) | 1e-95 | Click |
| 30 | 1073508..1075562 | PHAGE_Gifsy_2: bacteriophage DNA packaging protein; terminase, large subunit; SL1344_0969; phage(gi169257299) | 0.0 | Click |
| 31 | 1075762..1077309 | PHAGE_Gifsy_2: bacteriophage portal protein; SL1344_0971; phage(gi169257301) | 0.0 | Click |
| 32 | 1077233..1079314 | PHAGE_Gifsy_2: bacteriophage Clp protease involved in capsid processing; SL1344_0972; phage(gi169257302) | 0.0 | Click |
| 33 | 1079405..1079728 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SL1344_0973; phage(gi169257303) | 3e-55 | Click |
| 34 | 1079721..1080020 | PHAGE_Gifsy_2: conserved hypothetical bacteriophage protein; SL1344_0974; phage(gi169257304) | 6e-52 | Click |
| 35 | 1080001..1080567 | PHAGE_Gifsy_2: bacteriophage morphogenesis protein; Lambda gpZ homolog; SL1344_0975; phage(gi169257305) | 3e-103 | Click |
| 36 | 1080564..1080965 | PHAGE_Gifsy_2: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; SL1344_0976; phage(gi169257306) | 3e-72 | Click |
| 37 | 1081040..1081726 | PHAGE_Gifsy_2: bacteriophage major tail protein; Lambda gpV homolog; SL1344_0977; phage(gi169257307) | 4e-127 | Click |
| 38 | 1081772..1082170 | PHAGE_Gifsy_2: bacteriophage tail assembly chaperone; Lambda gpG homolog; SL1344_0978; phage(gi169257308) | 8e-70 | Click |
| 39 | 1082233..1082496 | PHAGE_Gifsy_2: bacteriophage tail assembly chapterone - part of G+G' frameshift hybrid protein ; Lambda gpT homolog; SL1344_0979; phage(gi169257309) | 4e-43 | Click |
| 40 | 1082510..1085563 | PHAGE_Gifsy_2: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; SL1344_0980; phage(gi169257310) | 0.0 | Click |
| 41 | 1085560..1085892 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpM homolog; SL1344_0981; phage(gi169257311) | 2e-61 | Click |
| 42 | 1085991..1086488 | PHAGE_Gifsy_2: bacteriophage virulence determinant; Lom homolog; SL1344_0982; phage(gi169257312) | 3e-93 | Click |
| 43 | complement(1086605..1087138) | PHAGE_Gifsy_2: bacteriophage virulence determinant; superoxide dismutase precursor; SL1344_0983; phage(gi169257313) | 3e-102 | Click |
| 44 | 1087228..1087923 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpL homolog; SL1344_0984; phage(gi169257314) | 1e-135 | Click |
| 45 | 1087933..1088670 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpK homolog; SL1344_0985; phage(gi169257315) | 3e-152 | Click |
| 46 | 1088568..1089272 | PHAGE_Gifsy_2: bacteriophage tail tip assembly protein; Lambda gpI homolog; SL1344_0986; phage(gi169257316) | 5e-129 | Click |
| 47 | 1089344..1092694 | PHAGE_Gifsy_2: bacteriophage tail fiber (host specificity) protein; Lambda gp J homolog; SL1344_0987; phage(gi169257317) | 0.0 | Click |
| 48 | 1093029..1095236 | PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; SL1344_0988; phage(gi169257320) | 0.0 | Click |
| 49 | 1095236..1095817 | PHAGE_Gifsy_2: bacteriophage side tail fiber assembly protein; Lambda gpTfa analog; SL1344_0989; phage(gi169257321) | 3e-111 | Click |
| 50 | 1096293..1097261 | PHAGE_Gifsy_2: prophage virulence determinant; secreted effector protein; SL1344_0991; phage(gi169257322) | 0.0 | Click |
| 51 | complement(1097909..1098535) | PHAGE_Pseudo_F116: hypothetical protein F116p67; SL1344_0993; phage(gi56692976) | 7e-31 | Click |
| 52 | complement(1098604..1098903) | predicted bacteriophage protein (pseudogene); SL1344_0994 | N/A | Click |
| 53 | complement(1098888..1099574) | bacteriophage encoded virulence factor; SL1344_0995 | N/A | Click |
| 54 | complement(1099845..1100036) | PHAGE_Entero_mEp390: DinI-like family protein; SL1344_0996; phage(gi428782688) | 6e-25 | Click |
| 55 | 1100342..1100356 | attR TTATAAAAATGTAGC | N/A | Click |
Region 3, total : 17 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1915906..1915928 | attL AAAAAGAGACCGAATACGATTCC | N/A | Click |
| 2 | complement(1916257..1916457) | conserved hypothetical protein; SL1344_1792 | N/A | Click |
| 3 | 1917075..1917989 | inner membrane protein (PagO); SL1344_1793 | N/A | Click |
| 4 | 1918122..1918280 | putative inner membrane protein; SL1344_1794 | N/A | Click |
| 5 | 1918290..1918904 | putative membrane protein; SL1344_1795 | N/A | Click |
| 6 | complement(1919657..1919839) | virulence factor; SL1344_1797 | N/A | Click |
| 7 | 1920747..1920947 | PHAGE_Gifsy_1: PagK-like protein; SL1344_1799; phage(gi169257211) | 3e-34 | Click |
| 8 | complement(1921044..1921925) | PHAGE_Salmon_1: putative bacteriophage tail assembly protein; SL1344_1800; phage(gi169257205) | 4e-73 | Click |
| 9 | complement(1922080..1922343) | PHAGE_Salmon_1: bacteriophage terminase, small subunit; SL1344_1801; phage(gi169257184) | 7e-43 | Click |
| 10 | 1922651..1922818 | putative bacteriophage membrane protein; SL1344_1802 | N/A | Click |
| 11 | complement(1923075..1923608) | PROPHAGE_Salmon_LT2: phage-tail assembly-like protein; SL1344_1803; phage(gi16765210) | 5e-95 | Click |
| 12 | 1924594..1925490 | PHAGE_Entero_mEp235: integrase; SL1344_1806; phage(gi428781836) | 6e-68 | Click |
| 13 | 1925621..1925643 | attR AAAAAGAGACCGAATACGATTCC | N/A | Click |
| 14 | complement(1925864..1926217) | PHAGE_Entero_PsP3: gp28; SL1344_1807; phage(gi41057381) | 4e-08 | Click |
| 15 | complement(1926234..1927109) | putative cation transporter; SL1344_1808 | N/A | Click |
| 16 | complement(1927110..1927490) | putative cation resistance protein; SL1344_1809 | N/A | Click |
| 17 | 1927622..1927852 | PHAGE_Pectob_ZF40: putative DNA polymerase; SL1344_1810; phage(gi422936677) | 6e-17 | Click |
| 18 | 1927960..1928616 | conserved hypothetical protein; SL1344_1811 | N/A | Click |
| 19 | 1928640..1929338 | PHAGE_Cronob_vB_CsaM_GAP32: putative DNA polymerase III epsilon subunit; SL1344_1812; phage(gi414087193) | 2e-15 | Click |
Region 4, total : 59 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(2037460..2038728) | PHAGE_Salmon_vB_SosS_Oslo: error-prone lesion bypass DNA polymerase V; SL1344_1925; phage(gi399528790) | 0.0 | Click |
| 2 | complement(2038731..2039150) | PHAGE_Salmon_vB_SosS_Oslo: errror-prone repair protein UmuD; SL1344_1926; phage(gi399528789) | 1e-31 | Click |
| 3 | complement(2039277..2039438) | conserved hypothetical protein; SL1344_1927 | N/A | Click |
| 4 | complement(2039416..2039658) | conserved hypothetical protein; SL1344_1927A | N/A | Click |
| 5 | 2040485..2040496 | attL TAGCGTAAGGGT | N/A | Click |
| 6 | 2040503..2041510 | PHAGE_Salmon_ST64B: hypothetical protein sb26; SL1344_1928; phage(gi23505470) | 0.0 | Click |
| 7 | complement(2041795..2042394) | PHAGE_Salmon_ST64B: Probable tail fiber assembly protein; SL1344_1929; phage(gi23505469) | 3e-109 | Click |
| 8 | complement(2042364..2043959) | PHAGE_Salmon_ST64B: tail protein; SL1344_1930; phage(gi23505468) | 0.0 | Click |
| 9 | complement(2043913..2044500) | PHAGE_Salmon_ST64B: putative tail protein; SL1344_1931; phage(gi23505467) | 2e-115 | Click |
| 10 | complement(2044503..2045024) | PHAGE_Salmon_ST64B: putative tail protein; SL1344_1932; phage(gi23505466) | 8e-96 | Click |
| 11 | complement(2045059..2045604) | PHAGE_Salmon_ST64B: putative head assembly protein; SL1344_1933; phage(gi23505465) | 1e-101 | Click |
| 12 | complement(2045576..2045989) | PHAGE_Salmon_ST64B: putative tail protein; SL1344_1934; phage(gi23505464) | 2e-77 | Click |
| 13 | complement(2045994..2046527) | PHAGE_Salmon_ST64B: putative base plate assembly protein; SL1344_1935; phage(gi23505463) | 3e-99 | Click |
| 14 | complement(2046527..2047585) | PHAGE_Salmon_ST64B: Tail protein; SL1344_1936; phage(gi23505462) | 0.0 | Click |
| 15 | complement(2047582..2048922) | PHAGE_Salmon_ST64B: tail/DNA circulation protein; SL1344_1937; phage(gi23505461) | 0.0 | Click |
| 16 | complement(2048956..2050884) | PHAGE_Salmon_ST64B: tail protein; SL1344_1938; phage(gi23505460) | 0.0 | Click |
| 17 | complement(2050969..2051295) | PHAGE_Salmon_ST64B: hypothetical protein sb15; SL1344_1939; phage(gi23505501) | 1e-55 | Click |
| 18 | complement(2051292..2051648) | PHAGE_Salmon_ST64B: Tail tube protein; SL1344_1940; phage(gi23505459) | 8e-65 | Click |
| 19 | complement(2051648..2053144) | PHAGE_Salmon_ST64B: Tail Sheath protein; SL1344_1941; phage(gi23505458) | 0.0 | Click |
| 20 | complement(2053302..2053862) | PHAGE_Salmon_ST64B: hypothetical protein sb11; SL1344_1942; phage(gi23505456) | 3e-107 | Click |
| 21 | complement(2053859..2054377) | PHAGE_Salmon_ST64B: hypothetical protein sb10; SL1344_1943; phage(gi23505455) | 3e-97 | Click |
| 22 | complement(2054343..2054747) | PHAGE_Salmon_ST64B: hypothetical protein sb9; SL1344_1944; phage(gi23505454) | 8e-74 | Click |
| 23 | complement(2054744..2055067) | PHAGE_Salmon_ST64B: hypothetical protein sb8; SL1344_1945; phage(gi23505453) | 5e-57 | Click |
| 24 | complement(2055070..2055270) | PHAGE_Salmon_ST64B: hypothetical protein sb7; SL1344_1946; phage(gi23505452) | 2e-31 | Click |
| 25 | complement(2055321..2056526) | PHAGE_Salmon_ST64B: Major capsid protein precursor; SL1344_1947; phage(gi23505451) | 0.0 | Click |
| 26 | complement(2056541..2057227) | PHAGE_Salmon_ST64B: Pro-head protease; SL1344_1948; phage(gi23505450) | 3e-127 | Click |
| 27 | complement(2057169..2058410) | PHAGE_Salmon_ST64B: Portal Protein; SL1344_1949; phage(gi23505449) | 0.0 | Click |
| 28 | complement(2058604..2060337) | PHAGE_Salmon_ST64B: Terminase large subunit; SL1344_1950; phage(gi23505447) | 0.0 | Click |
| 29 | complement(2060334..2060837) | PHAGE_Salmon_ST64B: terminase small subunit; SL1344_1951; phage(gi23505446) | 1e-92 | Click |
| 30 | complement(2060954..2061304) | PHAGE_Salmon_ST64B: hypothetical protein sb56; SL1344_1952; phage(gi23505500) | 3e-68 | Click |
| 31 | complement(2061365..2061667) | PHAGE_Salmon_ST64B: hypothetical protein sb55; SL1344_1953; phage(gi23505499) | 2e-53 | Click |
| 32 | complement(2061887..2062306) | PHAGE_Salmon_ST64B: hypothetical protein sb54; SL1344_1954; phage(gi23505498) | 1e-73 | Click |
| 33 | complement(2062519..2063004) | PHAGE_Salmon_ST64B: lysis protein; SL1344_1955; phage(gi23505497) | 2e-86 | Click |
| 34 | complement(2063001..2063615) | PHAGE_Salmon_ST64B: lytic enzyme (putative glycohydrolase); SL1344_1956; phage(gi23505496) | 2e-116 | Click |
| 35 | complement(2063618..2063962) | PHAGE_Salmon_ST64B: lysis protein (holin); SL1344_1957; phage(gi23505495) | 5e-46 | Click |
| 36 | complement(2064488..2064847) | PHAGE_Salmon_ST64B: hypothetical protein sb50; SL1344_1958; phage(gi23505494) | 4e-67 | Click |
| 37 | complement(2064878..2065501) | PHAGE_Salmon_ST64B: hypothetical protein sb49; SL1344_1959; phage(gi23505493) | 3e-120 | Click |
| 38 | complement(2065512..2066507) | PHAGE_Salmon_ST64B: hypothetical protein sb47; SL1344_1960; phage(gi23505491) | 3e-138 | Click |
| 39 | complement(2066509..2067414) | PHAGE_Salmon_ST64B: hypothetical protein sb46; SL1344_1961; phage(gi23505490) | 9e-165 | Click |
| 40 | complement(2067772..2068665) | PHAGE_Salmon_ST64B: putative DNA methyltransferase; SL1344_1962; phage(gi23505488) | 3e-175 | Click |
| 41 | complement(2068665..2069282) | PHAGE_Salmon_ST64B: putative transcriptional activator; SL1344_1963; phage(gi23505487) | 2e-98 | Click |
| 42 | complement(2069149..2069967) | PHAGE_Salmon_ST64B: putative replication protein; SL1344_1964; phage(gi23505486) | 5e-158 | Click |
| 43 | complement(2070185..2071393) | PHAGE_Salmon_ST64B: putative antirepressor; SL1344_1965; phage(gi23505485) | 0.0 | Click |
| 44 | complement(2071339..2072049) | PHAGE_Salmon_ST64B: hypothetical protein sb40; SL1344_1966; phage(gi23505484) | 7e-47 | Click |
| 45 | 2072244..2072939 | PHAGE_Salmon_ST64B: regulatory protein; SL1344_1967; phage(gi23505482) | 4e-129 | Click |
| 46 | 2073461..2073472 | attL TCCTCTGTAGTT | N/A | Click |
| 47 | 2073461..2073472 | attL TCCTCTGTAGTT | N/A | Click |
| 48 | 2073535..2074125 | PHAGE_Salmon_ST64B: hypothetical protein sb37; SL1344_1968; phage(gi23505481) | 5e-66 | Click |
| 49 | 2074183..2075010 | PHAGE_Salmon_ST64B: hypothetical protein sb36; SL1344_1969; phage(gi23505480) | 2e-154 | Click |
| 50 | 2075147..2075686 | PHAGE_Salmon_ST64B: hypothetical protein sb35; SL1344_1970; phage(gi23505479) | 7e-100 | Click |
| 51 | 2075984..2076499 | PHAGE_Salmon_ST64B: hypothetical protein sb33; SL1344_1971; phage(gi23505477) | 5e-98 | Click |
| 52 | 2076496..2077113 | PHAGE_Salmon_ST64B: hypothetical protein sb32; SL1344_1972; phage(gi23505476) | 2e-116 | Click |
| 53 | 2077110..2077943 | PHAGE_Salmon_ST64B: hypothetical protein sb31; SL1344_1973; phage(gi23505475) | 6e-164 | Click |
| 54 | 2077947..2078516 | PHAGE_Salmon_ST64B: Endodeoxyribonuclease; SL1344_1974; phage(gi23505474) | 8e-110 | Click |
| 55 | 2078541..2078783 | PHAGE_Salmon_ST64B: hypothetical protein sb29; SL1344_1975; phage(gi23505473) | 2e-41 | Click |
| 56 | 2078785..2079774 | PHAGE_Salmon_ST64B: Integrase protein; SL1344_1976; phage(gi23505472) | 0.0 | Click |
| 57 | complement(2079891..2079977) | tRNA | N/A | Click |
| 58 | 2080066..2080863 | conserved hypothetical protein; SL1344_1977 | N/A | Click |
| 59 | 2080964..2081036 | tRNA | N/A | Click |
| 60 | 2080964..2080975 | attR TCCTCTGTAGTT | N/A | Click |
| 61 | 2081235..2081525 | PROPHAGE_Escher_CFT073: prophage P4 integrase; SL1344_1978; phage(gi26251179) | 2e-12 | Click |
| 62 | 2081934..2082006 | tRNA | N/A | Click |
| 63 | 2081934..2081945 | attR TCCTCTGTAGTT | N/A | Click |
| 64 | 2082173..2082646 | PHAGE_Entero_phiV10: hypothetical protein PhiV10p09; SL1344_1979; phage(gi89152430) | 5e-45 | Click |
| 65 | 2082737..2083009 | hypothetical protein; SL1344_1980 | N/A | Click |
| 66 | 2083094..2083819 | PROPHAGE_Salmon_LT2: integrase; SL1344_1981; phage(gi16766072) | 2e-39 | Click |
| 67 | 2084162..2086330 | PHAGE_Megavi_lba: putative Sel1-like repeat-containing protein; SL1344_1982; phage(gi448826087) | 2e-19 | Click |
| 68 | 2090551..2090562 | attR TAGCGTAAGGGT | N/A | Click |
Region 5, total : 56 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2726717..2728186 | PHAGE_Gifsy_1: leucine-rich repeat protein; SL1344_2546; phage(gi169257209) | 0.0 | Click |
| 2 | 2729043..2729588 | PHAGE_Gifsy_1: hypothetical protein STM2585.Gifsy1; SL1344_2547; phage(gi169257210) | 1e-101 | Click |
| 3 | 2729773..2729784 | attL ACAAAAACCATG | N/A | Click |
| 4 | complement(2730253..2730318) | predicted bacteriophage protein; SL1344_2548 | N/A | Click |
| 5 | 2730700..2730927 | PHAGE_Gifsy_1: PagK-like protein; SL1344_2549; phage(gi169257211) | 8e-41 | Click |
| 6 | complement(2731024..2731602) | PHAGE_Gifsy_1: bacteriophage side tail fiber assembly factor & structural component; Lambda gpTfa homolog; SL1344_2550; phage(gi169257212) | 1e-110 | Click |
| 7 | complement(2731592..2732416) | PHAGE_Gifsy_1: conserved hypothetical protein; contains pfam01661, Macro, Macro domain; SL1344_2551; phage(gi169257213) | 2e-161 | Click |
| 8 | complement(2732413..2734785) | PHAGE_Gifsy_1: bacteriophage side tail fiber protein; Lambda gpSft (gpN) homolog; SL1344_2552; phage(gi169257214) | 0.0 | Click |
| 9 | complement(2734839..2735081) | PHAGE_Gifsy_1: hypothetical protein STM2589.1n.Gifsy1; SL1344_2552A; phage(gi169257215) | 4e-40 | Click |
| 10 | complement(2735120..2738482) | PHAGE_Gifsy_1: bacteriophage host specificity protein; tail fiber; Lambda gpJ homolog; SL1344_2553; phage(gi169257216) | 0.0 | Click |
| 11 | complement(2738544..2739191) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpI homolog; SL1344_2554; phage(gi169257217) | 6e-121 | Click |
| 12 | complement(2739089..2739826) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpK homolog; SL1344_2555; phage(gi169257218) | 2e-123 | Click |
| 13 | complement(2739833..2740534) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpL homolog; SL1344_2556; phage(gi169257219) | 7e-136 | Click |
| 14 | complement(2740541..2740870) | PHAGE_Gifsy_1: bacteriophage tail tip assembly protein; Lambda gpM homolog; SL1344_2557; phage(gi169257220) | 2e-61 | Click |
| 15 | complement(2740873..2743968) | PHAGE_Gifsy_1: bacteriophage tail tape measure protein; minor tail protein; Lambda gpH homolog; SL1344_2558; phage(gi169257221) | 0.0 | Click |
| 16 | complement(2743940..2744257) | PHAGE_Gifsy_1: part of bacteriophage tail assembly chaperone gpG by translational frameshifting; Lambda gpT homolog; SL1344_2559; phage(gi169257222) | 8e-57 | Click |
| 17 | complement(2744275..2744670) | PHAGE_Gifsy_1: bacteriophage tail assembly chaperone; Lambda gpG homolog; SL1344_2560; phage(gi169257223) | 2e-70 | Click |
| 18 | complement(2744721..2745467) | PHAGE_Gifsy_1: bacteriophage major tail subunit; Lambda gpV homolog; SL1344_2561; phage(gi169257224) | 5e-138 | Click |
| 19 | complement(2745475..2745876) | PHAGE_Gifsy_1: bacteriophage tail shaft stabilization protein; Lambda gpU homolog; SL1344_2562; phage(gi169257225) | 2e-73 | Click |
| 20 | 2745865..2747115 | PHAGE_Gifsy_1: transposase; SL1344_2563; phage(gi169257226) | 0.0 | Click |
| 21 | complement(2747164..2747742) | PHAGE_Gifsy_1: bacteriophage head-tail assembly protein; Lambda gpZ homolog; SL1344_2564; phage(gi169257227) | 7e-104 | Click |
| 22 | complement(2747770..2748153) | PHAGE_Gifsy_1: bacteriophage minor capsid protein; forms tail attachment site on head; Lambda FII homolog; SL1344_2565; phage(gi169257228) | 1e-68 | Click |
| 23 | complement(2748164..2748523) | PHAGE_Gifsy_1: bacteriophage accessory DNA packaging protein; Lambda FI homolog; SL1344_2566; phage(gi169257229) | 4e-62 | Click |
| 24 | complement(2748581..2749609) | PHAGE_Gifsy_1: bacteriophage major capsid protein; Lambda gpE homolog; SL1344_2567; phage(gi169257230) | 0.0 | Click |
| 25 | complement(2749664..2750011) | PHAGE_Gifsy_1: bacteriophage head decoration protein; Lambda gpD homolog; SL1344_2568; phage(gi169257231) | 2e-61 | Click |
| 26 | complement(2750024..2751472) | PHAGE_Gifsy_1: bacteriophage prohead protease; Lambda gpC homolog; SL1344_2569; phage(gi169257232) | 0.0 | Click |
| 27 | complement(2751510..2753090) | PHAGE_Gifsy_1: bacteriophage portal protein; Lambda gpB homolog; SL1344_2570; phage(gi169257233) | 0.0 | Click |
| 28 | complement(2753087..2753290) | PHAGE_Gifsy_1: bacteriophage head-to-tail joining protein; adapter between portal and gpFII; Lambda gpW homolog; SL1344_2571; phage(gi169257234) | 2e-31 | Click |
| 29 | complement(2753274..2755205) | PHAGE_Gifsy_1: DNA packaging protein; large terminase subunit; Lambda gpA homolog; SL1344_2572; phage(gi169257235) | 0.0 | Click |
| 30 | complement(2755177..2755722) | PHAGE_Gifsy_1: DNA packaging protein; small terminase subunit; Lambda Nu1 homolog; SL1344_2573; phage(gi169257236) | 2e-87 | Click |
| 31 | 2756009..2756410 | PHAGE_Gifsy_1: hypothetical protein STM2610.Gifsy1; SL1344_2574; phage(gi169257237) | 9e-72 | Click |
| 32 | complement(2756646..2757119) | PHAGE_Gifsy_1: bacteriophage lysis protein; Rz; SL1344_2575; phage(gi169257238) | 6e-80 | Click |
| 33 | complement(2757116..2757568) | PHAGE_Gifsy_1: bacteriophage lysin protein; endolysin; SL1344_2576; phage(gi169257239) | 5e-82 | Click |
| 34 | 2758157..2758843 | PHAGE_Gifsy_1: virulence protein GogA; SL1344_2577; phage(gi169257241) | 9e-134 | Click |
| 35 | complement(2759338..2759411) | tRNA | N/A | Click |
| 36 | complement(2759753..2760316) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; SL1344_2578; phage(gi169257243) | 1e-103 | Click |
| 37 | complement(2760589..2761266) | PHAGE_Gifsy_1: bacteriophage antiterminator protein Q; SL1344_2579; phage(gi169257244) | 3e-130 | Click |
| 38 | complement(2761263..2761403) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; SL1344_2580; phage(gi169257245) | 7e-21 | Click |
| 39 | complement(2761400..2762011) | PHAGE_Gifsy_1: NinG; SL1344_2581; phage(gi169257246) | 2e-115 | Click |
| 40 | complement(2762220..2762822) | PHAGE_Gifsy_1: conserved hypothetical bacteriophage protein; SL1344_2582; phage(gi169257248) | 3e-110 | Click |
| 41 | complement(2762857..2763105) | PHAGE_Entero_mEp237: hypothetical protein; SL1344_2583; phage(gi435439314) | 2e-40 | Click |
| 42 | complement(2763222..2763455) | PHAGE_Gifsy_1: bacteriophage putative DNA damage-inducible protein; DinI homolog; SL1344_2584; phage(gi169257250) | 2e-38 | Click |
| 43 | complement(2763714..2763905) | PHAGE_Escher_HK639: hypothetical protein; SL1344_2585; phage(gi356870631) | 1e-19 | Click |
| 44 | complement(2764017..2764298) | PHAGE_Entero_phiV10: hypothetical protein PhiV10p54; SL1344_2586; phage(gi89152468) | 8e-49 | Click |
| 45 | complement(2764291..2764944) | PHAGE_Entero_P22: EaA; SL1344_2587; phage(gi9635497) | 3e-56 | Click |
| 46 | complement(2764947..2765417) | PHAGE_Pectob_ZF40: putative methylase; SL1344_2588; phage(gi422936660) | 8e-69 | Click |
| 47 | complement(2765419..2766084) | PHAGE_Salmon_epsilon34: EaD-like protein; SL1344_2589; phage(gi221328645) | 1e-27 | Click |
| 48 | complement(2766099..2766791) | PHAGE_Escher_HK639: replication protein 14; SL1344_2590; phage(gi356870655) | 4e-81 | Click |
| 49 | complement(2766788..2767693) | PHAGE_Entero_lambda: DNA replication protein; SL1344_2591; phage(gi9626295) | 8e-97 | Click |
| 50 | complement(2767785..2768207) | PHAGE_Gifsy_1: probable regulatory protein; transcriptional activator; lambda CII analog; SL1344_2592; phage(gi169257256) | 4e-65 | Click |
| 51 | 2768366..2768833 | PHAGE_Entero_mEp237: prophage repressor; SL1344_2593; phage(gi435439304) | 4e-73 | Click |
| 52 | 2768985..2770070 | PHAGE_Pseudo_phi297: putative ParA protein; SL1344_2594; phage(gi374531271) | 5e-62 | Click |
| 53 | complement(2770178..2770384) | PHAGE_Entero_HK225: hypothetical protein; SL1344_2595; phage(gi428782417) | 1e-19 | Click |
| 54 | 2771095..2774295 | PHAGE_Gifsy_1: bacteriophage exodeoxyribonuclease VIII-like protein; SL1344_2597; phage(gi169257262) | 0.0 | Click |
| 55 | 2774306..2775415 | PHAGE_Gifsy_1: RecT; SL1344_2597A; phage(gi169257263) | 0.0 | Click |
| 56 | 2775458..2775697 | PHAGE_Gifsy_1: hypothetical protein STM2634.Gifsy1; SL1344_2598; phage(gi169257264) | 7e-40 | Click |
| 57 | 2775738..2776022 | PHAGE_Gifsy_1: hypothetical protein STM2635.Gifsy1; SL1344_2599; phage(gi169257265) | 8e-52 | Click |
| 58 | complement(2776000..2777229) | PHAGE_Gifsy_1: bacteriophage integrase protein; SL1344_2600; phage(gi169257266) | 0.0 | Click |
| 59 | 2777303..2777314 | attR ACAAAAACCATG | N/A | Click |
Region 6, total : 16 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2813909..2815129 | PHAGE_Pseudo_MP1412: diguanylate-cyclase GGDEF domain; SL1344_2630; phage(gi399529005) | 2e-08 | Click |
| 2 | 2815215..2815226 | attL ATAAAAAAGGGG | N/A | Click |
| 3 | complement(2815382..2816431) | PHAGE_Entero_PsP3: gp27; SL1344_2631; phage(gi41057380) | 0.0 | Click |
| 4 | complement(2816456..2816794) | PHAGE_Entero_PsP3: gp28; SL1344_2632; phage(gi41057381) | 1e-43 | Click |
| 5 | complement(2816803..2817798) | PHAGE_Entero_PsP3: CI; SL1344_2633; phage(gi41057393) | 5e-114 | Click |
| 6 | 2817762..2818115 | PHAGE_Entero_PsP3: gp30; SL1344_2634; phage(gi41057382) | 1e-61 | Click |
| 7 | 2818166..2818675 | PHAGE_Entero_PsP3: gp31; SL1344_2635; phage(gi41057383) | 2e-92 | Click |
| 8 | 2818683..2818883 | PHAGE_Entero_PsP3: gp32; SL1344_2636; phage(gi41057384) | 3e-31 | Click |
| 9 | 2818847..2819185 | PHAGE_Salmon_RE_2010: hypothetical protein; SL1344_2637; phage(gi418489688) | 4e-37 | Click |
| 10 | 2819253..2819480 | PHAGE_Entero_PsP3: gp33; SL1344_2638; phage(gi41057385) | 9e-24 | Click |
| 11 | 2819480..2819704 | PHAGE_Entero_PsP3: gp34; SL1344_2639; phage(gi41057386) | 4e-37 | Click |
| 12 | 2819701..2820222 | PHAGE_Entero_PsP3: gp35; SL1344_2640; phage(gi41057387) | 2e-96 | Click |
| 13 | 2820291..2823074 | PHAGE_Entero_PsP3: gp36; SL1344_2641; phage(gi41057388) | 0.0 | Click |
| 14 | 2823088..2823573 | PHAGE_Entero_PsP3: gp25; SL1344_2642; phage(gi41057377) | 1e-80 | Click |
| 15 | 2823570..2824736 | PHAGE_Entero_PsP3: gp26; SL1344_2643; phage(gi41057378) | 0.0 | Click |
| 16 | 2824931..2825620 | predicted bacteriophage protein; SL1344_2644 | N/A | Click |
| 17 | 2825697..2825915 | PHAGE_Entero_PsP3: Pag; SL1344_2645; phage(gi41057379) | 2e-39 | Click |
| 18 | 2825990..2826001 | attR ATAAAAAAGGGG | N/A | Click |
Region 7, total : 57 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2855454..2855501 | attL ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAT | N/A | Click |
| 2 | complement(2855616..2855834) | PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); SL1344_2665; phage(gi169936018) | 2e-40 | Click |
| 3 | complement(2855903..2857003) | PHAGE_Entero_2: P2 gpD-like tail protein; SL1344_2666; phage(gi169936019) | 0.0 | Click |
| 4 | complement(2857000..2857485) | PHAGE_Entero_2: P2 gpU-like tail protein; SL1344_2667; phage(gi169936020) | 9e-87 | Click |
| 5 | complement(2857482..2860289) | PHAGE_Entero_2: P2 gpT-like tail protein; SL1344_2668; phage(gi169936021) | 0.0 | Click |
| 6 | complement(2860282..2860401) | PHAGE_Entero_2: P2 gpE-like protein; SL1344_2669; phage(gi169936022) | 9e-16 | Click |
| 7 | complement(2860416..2860718) | PHAGE_Entero_2: P2 gpE-like tail protein; SL1344_2670; phage(gi169936023) | 4e-48 | Click |
| 8 | complement(2860773..2861288) | PHAGE_Entero_2: P2 gpFII-like protein; SL1344_2671; phage(gi169936024) | 2e-94 | Click |
| 9 | complement(2861298..2862470) | PHAGE_Entero_2: P2 gpFI-like protein; SL1344_2672; phage(gi169936025) | 0.0 | Click |
| 10 | complement(2862587..2862790) | PHAGE_Entero_2: DNA-invertase; SL1344_2673; phage(gi169936026) | 3e-23 | Click |
| 11 | 2863004..2863726 | invasion-associated secreted protein; SL1344_2674 | N/A | Click |
| 12 | complement(2863923..2864330) | PHAGE_Entero_2: P2 gpG-like protein; SL1344_2675; phage(gi169936028) | 3e-66 | Click |
| 13 | complement(2864337..2865956) | PHAGE_Entero_2: P2 gpH-like protein; SL1344_2676; phage(gi169936030) | 1e-160 | Click |
| 14 | complement(2865953..2866558) | PHAGE_Entero_2: P2 gpI-like baseplate assembly protein; SL1344_2677; phage(gi169936031) | 7e-115 | Click |
| 15 | complement(2866551..2867459) | PHAGE_Entero_2: P2 gpJ-like baseplate assembly protein; SL1344_2678; phage(gi169936032) | 4e-164 | Click |
| 16 | complement(2867446..2867805) | PHAGE_Entero_2: P2 gpW-like baseplate protein; SL1344_2679; phage(gi169936033) | 1e-60 | Click |
| 17 | complement(2867802..2868380) | PHAGE_Entero_2: P2 gpV-like protein; SL1344_2680; phage(gi169936034) | 1e-110 | Click |
| 18 | complement(2868449..2868895) | PHAGE_Entero_2: P2 gpS-like tail completion protein; SL1344_2681; phage(gi169936035) | 2e-75 | Click |
| 19 | complement(2868888..2869319) | PHAGE_Entero_2: P2 gpR-like tail completion protein; SL1344_2682; phage(gi169936036) | 1e-76 | Click |
| 20 | complement(2869282..2869485) | PHAGE_Entero_2: P2 LysC-like protein; SL1344_2683; phage(gi169936037) | 6e-33 | Click |
| 21 | complement(2869415..2869843) | PHAGE_Entero_2: P2 LysB-like protein; SL1344_2684; phage(gi169936038) | 1e-74 | Click |
| 22 | complement(2869840..2870214) | PHAGE_Entero_2: hypothetical protein STM2714.2.Fels2; SL1344_2685; phage(gi169936040) | 6e-31 | Click |
| 23 | complement(2870219..2870689) | PHAGE_Entero_2: endolysin; SL1344_2686; phage(gi169936041) | 8e-88 | Click |
| 24 | complement(2870709..2870924) | PHAGE_Entero_2: lysis protein; SL1344_2687; phage(gi169936042) | 2e-35 | Click |
| 25 | complement(2870928..2871131) | PHAGE_Entero_2: P2 gpX-like tail protein; SL1344_2688; phage(gi169936043) | 1e-33 | Click |
| 26 | complement(2871131..2871595) | PHAGE_Entero_2: P2 gpL-like protein; SL1344_2689; phage(gi169936044) | 5e-87 | Click |
| 27 | complement(2871689..2872342) | PHAGE_Entero_2: P2 gpM-like protein; SL1344_2690; phage(gi169936045) | 3e-119 | Click |
| 28 | complement(2872346..2873428) | PHAGE_Entero_2: P2 gpN-like major capsid protein; SL1344_2691; phage(gi169936046) | 0.0 | Click |
| 29 | complement(2873445..2874278) | PHAGE_Entero_2: P2 gpO-like protein; SL1344_2692; phage(gi169936047) | 1e-145 | Click |
| 30 | 2874421..2876187 | PHAGE_Entero_2: P2 gpP-like protein; SL1344_2693; phage(gi169936048) | 0.0 | Click |
| 31 | 2876187..2877218 | PHAGE_Entero_2: P2 gpQ-like protein; SL1344_2694; phage(gi169936049) | 0.0 | Click |
| 32 | complement(2877245..2878222) | putative competence protein; SL1344_2695 | N/A | Click |
| 33 | complement(2878212..2878793) | predicted bacteriophage protein; SL1344_2696 | N/A | Click |
| 34 | complement(2879070..2879447) | PHAGE_Lactob_Lj965: hypothetical protein Ljo_0305; SL1344_2697; phage(gi41179237) | 5e-30 | Click |
| 35 | complement(2879425..2880480) | PHAGE_Lactob_Lj965: hypothetical protein Ljo_0304; SL1344_2698; phage(gi41179236) | 6e-67 | Click |
| 36 | complement(2880640..2880873) | PHAGE_Entero_2: TumB protein; SL1344_2699; phage(gi169936052) | 2e-34 | Click |
| 37 | complement(2880885..2881073) | PHAGE_Entero_2: hypothetical protein STM2728.Fels2; SL1344_2700; phage(gi169936053) | 8e-25 | Click |
| 38 | complement(2881397..2883640) | PHAGE_Entero_2: P2 gpA-like protein; SL1344_2701; phage(gi169936054) | 0.0 | Click |
| 39 | complement(2883631..2884488) | PHAGE_Entero_2: DNA adenine methylase-like protein; SL1344_2702; phage(gi169936055) | 2e-130 | Click |
| 40 | complement(2884485..2884712) | PHAGE_Entero_2: P2 gpOrf82-like protein; SL1344_2703; phage(gi169936056) | 9e-24 | Click |
| 41 | complement(2885007..2885348) | PHAGE_Entero_2: hypothetical protein STM2733.Fels2; SL1344_2704; phage(gi169936058) | 2e-51 | Click |
| 42 | complement(2885312..2885608) | PHAGE_Entero_2: hypothetical protein STM2735.Fels2; SL1344_2705; phage(gi169936060) | 5e-09 | Click |
| 43 | complement(2885953..2886462) | PHAGE_Entero_2: bacteriophage regulatory protein CII; SL1344_2706; phage(gi169936061) | 8e-89 | Click |
| 44 | complement(2886495..2886743) | PHAGE_Entero_2: bacteriophage regulatory protein Ap1; SL1344_2707; phage(gi169936062) | 1e-24 | Click |
| 45 | 2886920..2887495 | PHAGE_Entero_2: P2 CI-like protein; SL1344_2708; phage(gi169936063) | 3e-59 | Click |
| 46 | 2887497..2888522 | PHAGE_Entero_2: P2 Int-like protein; SL1344_2709; phage(gi169936064) | 0.0 | Click |
| 47 | 2888519..2889730 | PHAGE_Salmon_RE_2010: hypothetical protein; SL1344_2710; phage(gi418489682) | 4e-109 | Click |
| 48 | 2889844..2889891 | attR ATGTAGGAATTTCGGACGCGGGTTCAACTCCCGCCAGCTCCACCAAAT | N/A | Click |
| 49 | 2890073..2891269 | PROPHAGE_Escher_MG1655: CP4-57 prophage; integrase; SL1344_2712; phage(gi16130540) | 7e-136 | Click |
| 50 | complement(2891273..2892970) | PHAGE_Melano_entomopoxvirus: ORF MSV156 hypothetical protein; SL1344_2713; phage(gi9631364) | 7e-07 | Click |
| 51 | complement(2892957..2893190) | hypothetical protein; SL1344_2714 | N/A | Click |
| 52 | complement(2893177..2893725) | hypothetical protein; SL1344_2715 | N/A | Click |
| 53 | complement(2894442..2895008) | PHAGE_Entero_P4: amber mutation-suppressing protein; SL1344_2716; phage(gi9627520) | 3e-59 | Click |
| 54 | complement(2895025..2895267) | PHAGE_Entero_2: P2 gpOgr-like protein (acttivation of late gene expression); SL1344_2717; phage(gi169936018) | 1e-09 | Click |
| 55 | complement(2895264..2896067) | PHAGE_Entero_P4: head size determination protein sid; SL1344_2718; phage(gi9627518) | 6e-85 | Click |
| 56 | 2896310..2896321 | attL TTTGATTAAAAA | N/A | Click |
| 57 | 2896802..2897353 | PHAGE_Entero_P4: putative CI repressor; SL1344_2719; phage(gi9627516) | 1e-37 | Click |
| 58 | 2897350..2897577 | predicted bacteriophage protein; SL1344_2720 | N/A | Click |
| 59 | 2897574..2897894 | PHAGE_Entero_P4: hypothetical protein P4p07; SL1344_2721; phage(gi9627513) | 5e-53 | Click |
| 60 | 2897858..2900242 | PHAGE_Entero_P4: DNA primase; SL1344_2722; phage(gi9627512) | 0.0 | Click |
| 61 | 2908230..2908241 | attR TTTGATTAAAAA | N/A | Click |
Region 8, total : 13 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2922406..2922418 | attL AATGCTATTTTTA | N/A | Click |
| 2 | 2923005..2923880 | PROPHAGE_Salmon_LT2: integrase; SL1344_2744; phage(gi16766072) | 4e-168 | Click |
| 3 | 2924046..2925920 | putative inner membrane protein; SL1344_2745 | N/A | Click |
| 4 | complement(2926180..2927463) | putative inner membrane protein; SL1344_2746 | N/A | Click |
| 5 | complement(2929642..2929908) | PROPHAGE_Salmon_LT2: transposase; SL1344_2750; phage(gi16766077) | 7e-45 | Click |
| 6 | complement(2930361..2930999) | conserved hypothetical protein; SL1344_2751 | N/A | Click |
| 7 | complement(2930996..2932978) | putative DNA/RNA helicase; SL1344_2752 | N/A | Click |
| 8 | 2933257..2933556 | PROPHAGE_Escher_MG1655: IS3 transposase A; SL1344_2753; phage(gi226524700) | 2e-41 | Click |
| 9 | 2933553..2934419 | PROPHAGE_Escher_MG1655: IS3 transposase B; SL1344_2754; phage(gi16128284) | 3e-145 | Click |
| 10 | complement(2935199..2935738) | PHAGE_Salmon_SSU5: putative repressor of phase 1 flagellin; SL1344_2755; phage(gi390013956) | 9e-13 | Click |
| 11 | complement(2935806..2937326) | PHAGE_Escher_phiKT: tail fiber protein; SL1344_2756; phage(gi422936632) | 1e-07 | Click |
| 12 | 2937418..2937990 | PHAGE_Escher_D108: G region invertase; SL1344_2757; phage(gi281199698) | 4e-67 | Click |
| 13 | 2938953..2940068 | putative glycosyltransferase; SL1344_2758 | N/A | Click |
| 14 | 2940149..2943802 | PHAGE_Bacill_SPBc2: ABC transporter; SL1344_2759; phage(gi9630145) | 2e-25 | Click |
| 15 | 2953766..2953778 | attR AATGCTATTTTTA | N/A | Click |
Region 9, total : 25 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | complement(4439207..4439935) | PHAGE_Entero_P1: PmgQ; SL1344_4131; phage(gi46401711) | 7e-34 | Click |
| 2 | complement(4440132..4440422) | hypothetical protein; SL1344_4132 | N/A | Click |
| 3 | complement(4440671..4441126) | PHAGE_Haemop_SuMu: enoyl-CoA hydratase/carnithine racemase-like protein; SL1344_4133; phage(gi418489075) | 2e-24 | Click |
| 4 | complement(4441123..4441728) | predicted bacteriophage protein; SL1344_4134 | N/A | Click |
| 5 | complement(4441733..4443478) | PHAGE_Entero_PsP3: gp19; SL1344_4135; phage(gi41057371) | 1e-78 | Click |
| 6 | complement(4443481..4444113) | PHAGE_Burkho_BcepMu: gp51; SL1344_4136; phage(gi48696961) | 4e-26 | Click |
| 7 | complement(4444106..4445221) | PHAGE_Burkho_BcepMu: gp50; SL1344_4137; phage(gi48696960) | 2e-105 | Click |
| 8 | complement(4445212..4445571) | PHAGE_Burkho_BcepMu: gp49; SL1344_4138; phage(gi48696959) | 1e-35 | Click |
| 9 | complement(4445735..4447282) | PHAGE_Salmon_epsilon34: GtrC; putative membrane protein; SL1344_4139; phage(gi221328637) | 2e-59 | Click |
| 10 | complement(4447282..4448211) | PHAGE_Entero_SfV: bactoprenol glucosyltransferase; SL1344_4140; phage(gi19549012) | 3e-152 | Click |
| 11 | complement(4448208..4448570) | PHAGE_Entero_SfV: putative flippase; SL1344_4141; phage(gi19549013) | 7e-48 | Click |
| 12 | complement(4448898..4449620) | PHAGE_Burkho_BcepMu: gp48; SL1344_4142; phage(gi48696958) | 2e-39 | Click |
| 13 | complement(4449630..4450673) | PHAGE_Burkho_BcepMu: gp47; SL1344_4143; phage(gi48696957) | 9e-81 | Click |
| 14 | complement(4450661..4450870) | PHAGE_Burkho_BcepMu: gp46; SL1344_4144; phage(gi48696956) | 9e-19 | Click |
| 15 | complement(4450870..4451823) | PHAGE_Burkho_BcepMu: gp45; SL1344_4145; phage(gi48696955) | 1e-45 | Click |
| 16 | complement(4451823..4454177) | PHAGE_Burkho_BcepMu: gp44; SL1344_4146; phage(gi48696954) | 1e-68 | Click |
| 17 | complement(4454362..4454679) | PHAGE_Burkho_BcepMu: gp41; SL1344_4147; phage(gi48696951) | 4e-10 | Click |
| 18 | complement(4454731..4455255) | PHAGE_Burkho_BcepMu: gp40; SL1344_4148; phage(gi48696950) | 1e-68 | Click |
| 19 | complement(4455255..4456682) | PHAGE_Burkho_BcepMu: gp39; SL1344_4149; phage(gi48696949) | 0.0 | Click |
| 20 | complement(4456672..4456869) | PHAGE_Burkho_BcepMu: gp38; SL1344_4150; phage(gi48696948) | 2e-08 | Click |
| 21 | complement(4456866..4457321) | PHAGE_Burkho_BcepMu: gp37; SL1344_4151; phage(gi48696947) | 2e-13 | Click |
| 22 | complement(4457481..4457795) | PHAGE_Burkho_BcepMu: gp25; SL1344_4152; phage(gi48696935) | 3e-23 | Click |
| 23 | complement(4457808..4458413) | PHAGE_Burkho_BcepMu: gp22; SL1344_4153; phage(gi48696932) | 7e-57 | Click |
| 24 | complement(4458416..4458703) | PHAGE_Burkho_BcepMu: gp21; SL1344_4154; phage(gi48696931) | 7e-21 | Click |
| 25 | 4459279..4459626 | PHAGE_Burkho_BcepMu: gp01; SL1344_4155; phage(gi48696911) | 7e-24 | Click |