Definition | Roseburia intestinalis XB6B4 draft genome. |
---|---|
Accession | FP929050 |
Length | 4,286,292 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 20 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 3988647..3988660 | attL ACTTCCGATTTTGT | N/A | Click |
2 | 3989067..3990812 | PHAGE_Lister_A118: putative integrase; RO1_40190; phage(gi16798814) | 4e-14 | Click |
3 | 3990779..3990976 | hypothetical protein; RO1_40200 | N/A | Click |
4 | 3991757..3993049 | Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.; RO1_40220 | N/A | Click |
5 | 3993295..3993368 | tRNA | N/A | Click |
6 | 3993377..3993449 | tRNA | N/A | Click |
7 | 3993458..3993530 | tRNA | N/A | Click |
8 | 3993588..3993669 | tRNA | N/A | Click |
9 | 3993697..3993770 | tRNA | N/A | Click |
10 | 3993793..3993865 | tRNA | N/A | Click |
11 | 3993882..3993954 | tRNA | N/A | Click |
12 | complement(3994115..3995242) | PHAGE_Lactob_prophage_Lj928: putative integrase; RO1_40230; phage(gi41179288) | 2e-12 | Click |
13 | complement(3995454..3996233) | PHAGE_Lactob_KC5a: hypothetical protein; RO1_40240; phage(gi90592577) | 4e-10 | Click |
14 | complement(3996308..3997147) | PHAGE_Aeromo_44RR2_8t: hypothetical protein 44RRORF084c; RO1_40250; phage(gi37651565) | 2e-09 | Click |
15 | complement(3997172..3997570) | PHAGE_Spodop_litura_NPV: essential structural protein pp78/81; RO1_40260; phage(gi15617476) | 8e-05 | Click |
16 | complement(3998019..3998450) | PHAGE_Geobac_GBSV1: immunity repressor protein; RO1_40280; phage(gi115334658) | 4e-20 | Click |
17 | 3998678..3998848 | DNA binding domain, excisionase family; RO1_40290 | N/A | Click |
18 | 3998896..3999078 | hypothetical protein; RO1_40300 | N/A | Click |
19 | complement(3999059..3999409) | hypothetical protein; RO1_40310 | N/A | Click |
20 | 3999471..3999614 | hypothetical protein; RO1_40320 | N/A | Click |
21 | 3999626..3999823 | hypothetical protein; RO1_40330 | N/A | Click |
22 | 3999854..4000093 | hypothetical protein; RO1_40340 | N/A | Click |
23 | 4000180..4000368 | hypothetical protein; RO1_40350 | N/A | Click |
24 | 4000589..4002022 | PHAGE_Paenib_PG1: hypothetical protein; RO1_40370; phage(gi514231221) | 9e-57 | Click |
25 | 4002033..4002887 | hypothetical protein; RO1_40380 | N/A | Click |
26 | 4002871..4003674 | PHAGE_Paenib_PG1: hypothetical protein; RO1_40390; phage(gi514231223) | 1e-43 | Click |
27 | 4003675..4003992 | PHAGE_Lactob_c5: hypothetical protein; RO1_40400; phage(gi418488180) | 2e-06 | Click |
28 | 4004792..4005220 | PHAGE_Lactob_c5: putative Holliday junction resolvase; RO1_40420; phage(gi418488182) | 7e-18 | Click |
29 | 4015933..4015946 | attR ACTTCCGATTTTGT | N/A | Click |
Region 2, total : 28 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 4004284..4004296 | attL CAAAACCGGGAAG | N/A | Click |
2 | 4017613..4019049 | PHAGE_Clostr_phiCD38_2: minor capsid protein; RO1_40670; phage(gi333798110) | 1e-52 | Click |
3 | 4019052..4019195 | hypothetical protein; RO1_40680 | N/A | Click |
4 | 4019196..4019606 | hypothetical protein; RO1_40690 | N/A | Click |
5 | 4019606..4021447 | PHAGE_Clostr_phiCD38_2: minor capsid protein; RO1_40700; phage(gi333798111) | 3e-35 | Click |
6 | 4021440..4021580 | hypothetical protein; RO1_40710 | N/A | Click |
7 | complement(4021781..4022320) | PHAGE_Staphy_SpaA1: XRE family transcriptional regulator; RO1_40720; phage(gi399498895) | 2e-08 | Click |
8 | 4022469..4022684 | Helix-turn-helix.; RO1_40730 | N/A | Click |
9 | 4022788..4023600 | PHAGE_Paenib_PG1: anti-repressor protein; RO1_40740; phage(gi514231215) | 8e-21 | Click |
10 | 4023602..4023817 | hypothetical protein; RO1_40750 | N/A | Click |
11 | 4023814..4023975 | hypothetical protein; RO1_40760 | N/A | Click |
12 | 4024475..4024537 | tRNA | N/A | Click |
13 | 4024618..4025280 | PHAGE_Human_herpesvirus_8: LANA; RO1_40780; phage(gi139472804) | 6e-05 | Click |
14 | 4025284..4026336 | PHAGE_Clostr_phiCD38_2: phage coat protein; RO1_40790; phage(gi333798114) | 2e-93 | Click |
15 | 4026355..4026762 | PHAGE_Clostr_phiCD38_2: hypothetical protein; RO1_40800; phage(gi333798115) | 3e-06 | Click |
16 | 4026759..4026896 | hypothetical protein; RO1_40810 | N/A | Click |
17 | 4026896..4027321 | PHAGE_Clostr_phiCD38_2: hypothetical protein; RO1_40820; phage(gi333798116) | 6e-06 | Click |
18 | 4027322..4027777 | hypothetical protein; RO1_40830 | N/A | Click |
19 | 4027792..4028319 | PHAGE_Clostr_phiCD38_2: hypothetical protein; RO1_40840; phage(gi333798119) | 5e-05 | Click |
20 | 4028399..4028866 | hypothetical protein; RO1_40850 | N/A | Click |
21 | 4028863..4029480 | PHAGE_Clostr_phiCD38_2: hypothetical protein; RO1_40860; phage(gi333798121) | 1e-11 | Click |
22 | 4029497..4032103 | PHAGE_Paenib_PG1: tail tape measure protein; RO1_40870; phage(gi514231201) | 5e-30 | Click |
23 | 4032119..4032538 | hypothetical protein; RO1_40880 | N/A | Click |
24 | 4032535..4035042 | PHAGE_Strept_pyogenes_315_6: hypothetical protein SpyM3_1417; RO1_40890; phage(gi28876447) | 3e-09 | Click |
25 | 4035039..4035239 | hypothetical protein; RO1_40900 | N/A | Click |
26 | 4035232..4037763 | PHAGE_Pectob_My1: YadA domain-containing protein; RO1_40910; phage(gi410491156) | 4e-23 | Click |
27 | 4037837..4038133 | hypothetical protein; RO1_40920 | N/A | Click |
28 | 4038136..4038366 | PHAGE_Rhodoc_E3: putative holin; RO1_40930; phage(gi509142178) | 2e-06 | Click |
29 | 4038370..4039194 | PHAGE_Bacill_BCP78: cell wall hydrolase/autolysin; RO1_40940; phage(gi410492783) | 2e-28 | Click |
30 | complement(4039467..4039883) | Phage integrase family.; RO1_40950 | N/A | Click |
31 | 4049022..4049034 | attR CAAAACCGGGAAG | N/A | Click |