Definition Roseburia intestinalis XB6B4 draft genome.
Accession FP929050
Length 4,286,292
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 20 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 3988647..3988660  attL    ACTTCCGATTTTGT  N/A  Click
2 3989067..3990812  PHAGE_Lister_A118: putative integrase; RO1_40190; phage(gi16798814)  4e-14  Click
3 3990779..3990976  hypothetical protein; RO1_40200  N/A  Click
4 3991757..3993049  Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase.; RO1_40220  N/A  Click
5 3993295..3993368  tRNA  N/A  Click
6 3993377..3993449  tRNA  N/A  Click
7 3993458..3993530  tRNA  N/A  Click
8 3993588..3993669  tRNA  N/A  Click
9 3993697..3993770  tRNA  N/A  Click
10 3993793..3993865  tRNA  N/A  Click
11 3993882..3993954  tRNA  N/A  Click
12 complement(3994115..3995242)  PHAGE_Lactob_prophage_Lj928: putative integrase; RO1_40230; phage(gi41179288)  2e-12  Click
13 complement(3995454..3996233)  PHAGE_Lactob_KC5a: hypothetical protein; RO1_40240; phage(gi90592577)  4e-10  Click
14 complement(3996308..3997147)  PHAGE_Aeromo_44RR2_8t: hypothetical protein 44RRORF084c; RO1_40250; phage(gi37651565)  2e-09  Click
15 complement(3997172..3997570)  PHAGE_Spodop_litura_NPV: essential structural protein pp78/81; RO1_40260; phage(gi15617476)  8e-05  Click
16 complement(3998019..3998450)  PHAGE_Geobac_GBSV1: immunity repressor protein; RO1_40280; phage(gi115334658)  4e-20  Click
17 3998678..3998848  DNA binding domain, excisionase family; RO1_40290  N/A  Click
18 3998896..3999078  hypothetical protein; RO1_40300  N/A  Click
19 complement(3999059..3999409)  hypothetical protein; RO1_40310  N/A  Click
20 3999471..3999614  hypothetical protein; RO1_40320  N/A  Click
21 3999626..3999823  hypothetical protein; RO1_40330  N/A  Click
22 3999854..4000093  hypothetical protein; RO1_40340  N/A  Click
23 4000180..4000368  hypothetical protein; RO1_40350  N/A  Click
24 4000589..4002022  PHAGE_Paenib_PG1: hypothetical protein; RO1_40370; phage(gi514231221)  9e-57  Click
25 4002033..4002887  hypothetical protein; RO1_40380  N/A  Click
26 4002871..4003674  PHAGE_Paenib_PG1: hypothetical protein; RO1_40390; phage(gi514231223)  1e-43  Click
27 4003675..4003992  PHAGE_Lactob_c5: hypothetical protein; RO1_40400; phage(gi418488180)  2e-06  Click
28 4004792..4005220  PHAGE_Lactob_c5: putative Holliday junction resolvase; RO1_40420; phage(gi418488182)  7e-18  Click
29 4015933..4015946  attR    ACTTCCGATTTTGT  N/A  Click
Region 2, total : 28 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4004284..4004296  attL    CAAAACCGGGAAG  N/A  Click
2 4017613..4019049  PHAGE_Clostr_phiCD38_2: minor capsid protein; RO1_40670; phage(gi333798110)  1e-52  Click
3 4019052..4019195  hypothetical protein; RO1_40680  N/A  Click
4 4019196..4019606  hypothetical protein; RO1_40690  N/A  Click
5 4019606..4021447  PHAGE_Clostr_phiCD38_2: minor capsid protein; RO1_40700; phage(gi333798111)  3e-35  Click
6 4021440..4021580  hypothetical protein; RO1_40710  N/A  Click
7 complement(4021781..4022320)  PHAGE_Staphy_SpaA1: XRE family transcriptional regulator; RO1_40720; phage(gi399498895)  2e-08  Click
8 4022469..4022684  Helix-turn-helix.; RO1_40730  N/A  Click
9 4022788..4023600  PHAGE_Paenib_PG1: anti-repressor protein; RO1_40740; phage(gi514231215)  8e-21  Click
10 4023602..4023817  hypothetical protein; RO1_40750  N/A  Click
11 4023814..4023975  hypothetical protein; RO1_40760  N/A  Click
12 4024475..4024537  tRNA  N/A  Click
13 4024618..4025280  PHAGE_Human_herpesvirus_8: LANA; RO1_40780; phage(gi139472804)  6e-05  Click
14 4025284..4026336  PHAGE_Clostr_phiCD38_2: phage coat protein; RO1_40790; phage(gi333798114)  2e-93  Click
15 4026355..4026762  PHAGE_Clostr_phiCD38_2: hypothetical protein; RO1_40800; phage(gi333798115)  3e-06  Click
16 4026759..4026896  hypothetical protein; RO1_40810  N/A  Click
17 4026896..4027321  PHAGE_Clostr_phiCD38_2: hypothetical protein; RO1_40820; phage(gi333798116)  6e-06  Click
18 4027322..4027777  hypothetical protein; RO1_40830  N/A  Click
19 4027792..4028319  PHAGE_Clostr_phiCD38_2: hypothetical protein; RO1_40840; phage(gi333798119)  5e-05  Click
20 4028399..4028866  hypothetical protein; RO1_40850  N/A  Click
21 4028863..4029480  PHAGE_Clostr_phiCD38_2: hypothetical protein; RO1_40860; phage(gi333798121)  1e-11  Click
22 4029497..4032103  PHAGE_Paenib_PG1: tail tape measure protein; RO1_40870; phage(gi514231201)  5e-30  Click
23 4032119..4032538  hypothetical protein; RO1_40880  N/A  Click
24 4032535..4035042  PHAGE_Strept_pyogenes_315_6: hypothetical protein SpyM3_1417; RO1_40890; phage(gi28876447)  3e-09  Click
25 4035039..4035239  hypothetical protein; RO1_40900  N/A  Click
26 4035232..4037763  PHAGE_Pectob_My1: YadA domain-containing protein; RO1_40910; phage(gi410491156)  4e-23  Click
27 4037837..4038133  hypothetical protein; RO1_40920  N/A  Click
28 4038136..4038366  PHAGE_Rhodoc_E3: putative holin; RO1_40930; phage(gi509142178)  2e-06  Click
29 4038370..4039194  PHAGE_Bacill_BCP78: cell wall hydrolase/autolysin; RO1_40940; phage(gi410492783)  2e-28  Click
30 complement(4039467..4039883)  Phage integrase family.; RO1_40950  N/A  Click
31 4049022..4049034  attR    CAAAACCGGGAAG  N/A  Click