Definition Oligotropha carboxidovorans OM4, complete genome.
Accession CP002821
Length 3,539,447
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1578529..1579704  PHAGE_Marino_P12026: phage portal protein, HK97 family; OCA4_c14570; phage(gi399528319)  8e-25  Click
2 1579778..1580038  hypothetical protein; OCA4_c14580  N/A  Click
3 1580449..1580964  PHAGE_Tetras_SI1: phage prohead protease; OCA4_c14590; phage(gi472342256)  3e-20  Click
4 1581207..1581671  hypothetical protein; OCA4_c14600  N/A  Click
5 1581801..1583069  PHAGE_Salmon_ST64B: Major capsid protein precursor; OCA4_c14610; phage(gi23505451)  2e-83  Click
6 1583169..1583534  hypothetical protein; OCA4_c14620  N/A  Click
7 1583679..1583930  hypothetical protein; OCA4_c14630  N/A  Click
8 complement(1584279..1585037)  serine protease; OCA4_c14640  N/A  Click
9 1585093..1585662  PHAGE_Rhodob_RcapNL: hypothetical protein; OCA4_c14650; phage(gi461474967)  2e-14  Click
10 1585659..1585979  PHAGE_Burkho_2: gp9, phage head-tail adaptor, putative; OCA4_c14660; phage(gi134288641)  5e-06  Click
11 1586013..1586423  PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; OCA4_c14670; phage(gi461474971)  5e-15  Click
12 1586457..1586864  PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; OCA4_c14680; phage(gi461474972)  9e-24  Click
13 1586874..1587218  hypothetical protein; OCA4_c14690  N/A  Click
14 1587215..1587418  hypothetical protein; OCA4_c14700  N/A  Click
15 1587415..1588005  PHAGE_Entero_2009a: putative bacteriophage tail tape measure protein; OCA4_c14710; phage(gi225220098)  4e-17  Click
16 1588122..1588763  PHAGE_Roseob_1: putative glycoside hydrolase; OCA4_c14720; phage(gi331028135)  2e-35  Click
17 1588760..1589650  PHAGE_Tetras_SI1: hypothetical protein; OCA4_c14730; phage(gi472342235)  7e-28  Click
18 1589659..1590102  PHAGE_Roseob_1: phage cell wall peptidase; OCA4_c14740; phage(gi331028137)  2e-31  Click
19 1590102..1593971  PHAGE_Tetras_SI1: hypothetical protein; OCA4_c14750; phage(gi472342233)  7e-41  Click
20 1593978..1595447  PHAGE_Tetras_SI1: hypothetical protein; OCA4_c14760; phage(gi472342232)  5e-11  Click
21 complement(1595488..1596159)  PHAGE_Acanth_mimivirus: putative WbbJ Acetyltransferase; OCA4_c14770; phage(gi311977514)  2e-09  Click
22 1596264..1596794  PHAGE_Gifsy_1: bacteriophage lysin protein; endolysin; OCA4_c14780; phage(gi169257239)  7e-20  Click
Region 2, total : 22 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2012097..2012115  attL    TGGCGGAAGGGGTGTCCGC  N/A  Click
2 2012215..2013387  PROPHAGE_Mesorh_MAFF303099: phage integrase; OCA4_c18550; phage(gi13473443)  6e-89  Click
3 2013533..2013775  transcriptional regulator; OCA4_c18560  N/A  Click
4 2013772..2013975  hypothetical protein; OCA4_c18570  N/A  Click
5 2014177..2016042  putative ATPase, RecA family protein; OCA4_c18580  N/A  Click
6 2016275..2016943  hypothetical protein; OCA4_c18590  N/A  Click
7 2017115..2018053  hypothetical protein; OCA4_c18600  N/A  Click
8 2018060..2018296  hypothetical protein; OCA4_c18610  N/A  Click
9 2018296..2019516  PHAGE_Burkho_phiE125: putative portal protein; OCA4_c18620; phage(gi17975165)  8e-42  Click
10 2019513..2020046  PHAGE_Entero_phiP27: putative prohead protease; OCA4_c18630; phage(gi18249903)  2e-28  Click
11 2020054..2021202  PHAGE_Entero_phiP27: putative major capsid protein; OCA4_c18640; phage(gi18249904)  6e-46  Click
12 2021260..2021646  PHAGE_Azospi_Cd: hypothetical protein APCd_gp34; OCA4_c18650; phage(gi168495137)  6e-10  Click
13 2021960..2022133  hypothetical protein; OCA4_c18660  N/A  Click
14 2022412..2022711  phage-like protein; OCA4_c18670  N/A  Click
15 2022708..2023115  PHAGE_Entero_phiP27: hypothetical protein P27p35; OCA4_c18680; phage(gi18249899)  4e-09  Click
16 2023115..2023450  PHAGE_Marino_P12026: phage head-tail adaptor; OCA4_c18690; phage(gi399528325)  2e-05  Click
17 2023450..2025054  PHAGE_Entero_phiP27: putative terminase; OCA4_c18700; phage(gi18249900)  5e-43  Click
18 2025124..2025660  hypothetical protein; OCA4_c18710  N/A  Click
19 complement(2025673..2026566)  hypothetical protein; OCA4_c18720  N/A  Click
20 complement(2026572..2028044)  hypothetical protein; OCA4_c18730  N/A  Click
21 complement(2028284..2028859)  hypothetical protein; OCA4_c18740  N/A  Click
22 2029035..2029280  hypothetical protein; OCA4_c18750  N/A  Click
23 2029392..2029410  attR    TGGCGGAAGGGGTGTCCGC  N/A  Click
24 2029549..2030766  PROPHAGE_Mesorh_MAFF303099: phage integrase; OCA4_c18760; phage(gi13473443)  2e-103  Click
Region 3, total : 11 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 2617602..2617613  attL    GCCGCTTTTCGC  N/A  Click
2 2621495..2622430  PHAGE_Burkho_DC1: nuclease; OCA4_c24510; phage(gi401723085)  1e-15  Click
3 2622501..2623235  PHAGE_Tetras_TJE1: hypothetical protein; OCA4_c24520; phage(gi431810886)  9e-07  Click
4 2623262..2624647  PHAGE_Burkho_BcepMigl: RecT-like protein; OCA4_c24530; phage(gi431809863)  2e-33  Click
5 2624651..2625418  PHAGE_Salmon_SSU5: putative ribonuclease H; OCA4_c24540; phage(gi410491500)  8e-36  Click
6 2625420..2625905  PHAGE_Entero_IME10: single-stranded DNA-binding protein SSB-P1; OCA4_c24550; phage(gi422934292)  5e-37  Click
7 2625905..2626330  PHAGE_Cronob_vB_CsaM_GAP31: baseplate wedge protein gp25; OCA4_c24560; phage(gi414086904)  1e-18  Click
8 2626330..2627253  PHAGE_Burkho_phiE125: hypothetical protein phiE125p37; OCA4_c24570; phage(gi17975198)  5e-86  Click
9 2627250..2627936  hypothetical protein; OCA4_c24580  N/A  Click
10 2627933..2628235  PHAGE_Mycoba_Brujita: gp60; OCA4_c24590; phage(gi206599604)  3e-17  Click
11 2628249..2628842  hypothetical protein; OCA4_c24600  N/A  Click
12 2629169..2629180  attR    GCCGCTTTTCGC  N/A  Click
13 2629404..2630618  PHAGE_Burkho_phiE125: putative site-specific integrase; OCA4_c24610; phage(gi17975195)  2e-06  Click