Definition | Oligotropha carboxidovorans OM4, complete genome. |
---|---|
Accession | CP002821 |
Length | 3,539,447 |
Legend
Hits against Virus and prophage DB | |
Hits against Bacterial DB or GenBank file |
Region 1, total : 22 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 1578529..1579704 | PHAGE_Marino_P12026: phage portal protein, HK97 family; OCA4_c14570; phage(gi399528319) | 8e-25 | Click |
2 | 1579778..1580038 | hypothetical protein; OCA4_c14580 | N/A | Click |
3 | 1580449..1580964 | PHAGE_Tetras_SI1: phage prohead protease; OCA4_c14590; phage(gi472342256) | 3e-20 | Click |
4 | 1581207..1581671 | hypothetical protein; OCA4_c14600 | N/A | Click |
5 | 1581801..1583069 | PHAGE_Salmon_ST64B: Major capsid protein precursor; OCA4_c14610; phage(gi23505451) | 2e-83 | Click |
6 | 1583169..1583534 | hypothetical protein; OCA4_c14620 | N/A | Click |
7 | 1583679..1583930 | hypothetical protein; OCA4_c14630 | N/A | Click |
8 | complement(1584279..1585037) | serine protease; OCA4_c14640 | N/A | Click |
9 | 1585093..1585662 | PHAGE_Rhodob_RcapNL: hypothetical protein; OCA4_c14650; phage(gi461474967) | 2e-14 | Click |
10 | 1585659..1585979 | PHAGE_Burkho_2: gp9, phage head-tail adaptor, putative; OCA4_c14660; phage(gi134288641) | 5e-06 | Click |
11 | 1586013..1586423 | PHAGE_Rhodob_RcapNL: gene transfer agent (GTA) orfg8-like protein; OCA4_c14670; phage(gi461474971) | 5e-15 | Click |
12 | 1586457..1586864 | PHAGE_Rhodob_RcapNL: gene transfer aget (GTA) orfg9-like phage major tail protein; OCA4_c14680; phage(gi461474972) | 9e-24 | Click |
13 | 1586874..1587218 | hypothetical protein; OCA4_c14690 | N/A | Click |
14 | 1587215..1587418 | hypothetical protein; OCA4_c14700 | N/A | Click |
15 | 1587415..1588005 | PHAGE_Entero_2009a: putative bacteriophage tail tape measure protein; OCA4_c14710; phage(gi225220098) | 4e-17 | Click |
16 | 1588122..1588763 | PHAGE_Roseob_1: putative glycoside hydrolase; OCA4_c14720; phage(gi331028135) | 2e-35 | Click |
17 | 1588760..1589650 | PHAGE_Tetras_SI1: hypothetical protein; OCA4_c14730; phage(gi472342235) | 7e-28 | Click |
18 | 1589659..1590102 | PHAGE_Roseob_1: phage cell wall peptidase; OCA4_c14740; phage(gi331028137) | 2e-31 | Click |
19 | 1590102..1593971 | PHAGE_Tetras_SI1: hypothetical protein; OCA4_c14750; phage(gi472342233) | 7e-41 | Click |
20 | 1593978..1595447 | PHAGE_Tetras_SI1: hypothetical protein; OCA4_c14760; phage(gi472342232) | 5e-11 | Click |
21 | complement(1595488..1596159) | PHAGE_Acanth_mimivirus: putative WbbJ Acetyltransferase; OCA4_c14770; phage(gi311977514) | 2e-09 | Click |
22 | 1596264..1596794 | PHAGE_Gifsy_1: bacteriophage lysin protein; endolysin; OCA4_c14780; phage(gi169257239) | 7e-20 | Click |
Region 2, total : 22 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2012097..2012115 | attL TGGCGGAAGGGGTGTCCGC | N/A | Click |
2 | 2012215..2013387 | PROPHAGE_Mesorh_MAFF303099: phage integrase; OCA4_c18550; phage(gi13473443) | 6e-89 | Click |
3 | 2013533..2013775 | transcriptional regulator; OCA4_c18560 | N/A | Click |
4 | 2013772..2013975 | hypothetical protein; OCA4_c18570 | N/A | Click |
5 | 2014177..2016042 | putative ATPase, RecA family protein; OCA4_c18580 | N/A | Click |
6 | 2016275..2016943 | hypothetical protein; OCA4_c18590 | N/A | Click |
7 | 2017115..2018053 | hypothetical protein; OCA4_c18600 | N/A | Click |
8 | 2018060..2018296 | hypothetical protein; OCA4_c18610 | N/A | Click |
9 | 2018296..2019516 | PHAGE_Burkho_phiE125: putative portal protein; OCA4_c18620; phage(gi17975165) | 8e-42 | Click |
10 | 2019513..2020046 | PHAGE_Entero_phiP27: putative prohead protease; OCA4_c18630; phage(gi18249903) | 2e-28 | Click |
11 | 2020054..2021202 | PHAGE_Entero_phiP27: putative major capsid protein; OCA4_c18640; phage(gi18249904) | 6e-46 | Click |
12 | 2021260..2021646 | PHAGE_Azospi_Cd: hypothetical protein APCd_gp34; OCA4_c18650; phage(gi168495137) | 6e-10 | Click |
13 | 2021960..2022133 | hypothetical protein; OCA4_c18660 | N/A | Click |
14 | 2022412..2022711 | phage-like protein; OCA4_c18670 | N/A | Click |
15 | 2022708..2023115 | PHAGE_Entero_phiP27: hypothetical protein P27p35; OCA4_c18680; phage(gi18249899) | 4e-09 | Click |
16 | 2023115..2023450 | PHAGE_Marino_P12026: phage head-tail adaptor; OCA4_c18690; phage(gi399528325) | 2e-05 | Click |
17 | 2023450..2025054 | PHAGE_Entero_phiP27: putative terminase; OCA4_c18700; phage(gi18249900) | 5e-43 | Click |
18 | 2025124..2025660 | hypothetical protein; OCA4_c18710 | N/A | Click |
19 | complement(2025673..2026566) | hypothetical protein; OCA4_c18720 | N/A | Click |
20 | complement(2026572..2028044) | hypothetical protein; OCA4_c18730 | N/A | Click |
21 | complement(2028284..2028859) | hypothetical protein; OCA4_c18740 | N/A | Click |
22 | 2029035..2029280 | hypothetical protein; OCA4_c18750 | N/A | Click |
23 | 2029392..2029410 | attR TGGCGGAAGGGGTGTCCGC | N/A | Click |
24 | 2029549..2030766 | PROPHAGE_Mesorh_MAFF303099: phage integrase; OCA4_c18760; phage(gi13473443) | 2e-103 | Click |
Region 3, total : 11 CDS
# | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
---|---|---|---|---|
1 | 2617602..2617613 | attL GCCGCTTTTCGC | N/A | Click |
2 | 2621495..2622430 | PHAGE_Burkho_DC1: nuclease; OCA4_c24510; phage(gi401723085) | 1e-15 | Click |
3 | 2622501..2623235 | PHAGE_Tetras_TJE1: hypothetical protein; OCA4_c24520; phage(gi431810886) | 9e-07 | Click |
4 | 2623262..2624647 | PHAGE_Burkho_BcepMigl: RecT-like protein; OCA4_c24530; phage(gi431809863) | 2e-33 | Click |
5 | 2624651..2625418 | PHAGE_Salmon_SSU5: putative ribonuclease H; OCA4_c24540; phage(gi410491500) | 8e-36 | Click |
6 | 2625420..2625905 | PHAGE_Entero_IME10: single-stranded DNA-binding protein SSB-P1; OCA4_c24550; phage(gi422934292) | 5e-37 | Click |
7 | 2625905..2626330 | PHAGE_Cronob_vB_CsaM_GAP31: baseplate wedge protein gp25; OCA4_c24560; phage(gi414086904) | 1e-18 | Click |
8 | 2626330..2627253 | PHAGE_Burkho_phiE125: hypothetical protein phiE125p37; OCA4_c24570; phage(gi17975198) | 5e-86 | Click |
9 | 2627250..2627936 | hypothetical protein; OCA4_c24580 | N/A | Click |
10 | 2627933..2628235 | PHAGE_Mycoba_Brujita: gp60; OCA4_c24590; phage(gi206599604) | 3e-17 | Click |
11 | 2628249..2628842 | hypothetical protein; OCA4_c24600 | N/A | Click |
12 | 2629169..2629180 | attR GCCGCTTTTCGC | N/A | Click |
13 | 2629404..2630618 | PHAGE_Burkho_phiE125: putative site-specific integrase; OCA4_c24610; phage(gi17975195) | 2e-06 | Click |