Definition Ralstonia solanacearum Po82, complete genome.
Accession CP002819
Length 3,481,091
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 21 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1582856..1582869  attL    GAATGGTGCGGCGC  N/A  Click
2 complement(1595719..1595835)  phage integrase family protein; RSPO_c01528  N/A  Click
3 complement(1595859..1596389)  conserved hypothetical protein; RSPO_c01529  N/A  Click
4 complement(1596450..1596653)  hypothetical protein; RSPO_c01530  N/A  Click
5 complement(1596782..1597357)  exonuclease; RSPO_c01531  N/A  Click
6 1597500..1597511  attL    CCTCCGGTTTGC  N/A  Click
7 1597527..1597781  hypothetical protein; RSPO_c01532  N/A  Click
8 complement(1598789..1599397)  hypothethical protein; RSPO_c01533  N/A  Click
9 1599927..1600442  conserved hypothetical protein; RSPO_c01534  N/A  Click
10 1600486..1603617  putative DNA methylase; RSPO_c01535  N/A  Click
11 1603614..1604378  conserved hypothetical protein; RSPO_c01536  N/A  Click
12 1604727..1605050  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; RSPO_c01537; phage(gi157166062)  7e-29  Click
13 complement(1605125..1606012)  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFB protein; RSPO_c01538; phage(gi17546154)  1e-109  Click
14 complement(1605970..1606335)  PHAGE_Entero_4795: hypothetical protein PBV4795_ORF79; RSPO_c01539; phage(gi157166064)  2e-06  Click
15 complement(1606414..1606632)  PHAGE_Burkho_phiE125: ISBt3 transposase subunit protein; RSPO_c01540; phage(gi17975200)  6e-13  Click
16 1606697..1607062  PHAGE_Entero_4795: hypothetical protein PBV4795_ORF79; RSPO_c01541; phage(gi157166064)  2e-06  Click
17 1607020..1607907  PROPHAGE_Ralsto_GMI1000: ISRSO10-transposase ORFB protein; RSPO_c01542; phage(gi17546154)  1e-109  Click
18 1607951..1608643  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; RSPO_c01543; phage(gi157166067)  5e-76  Click
19 complement(1608812..1609510)  conserved hypothetical protein; RSPO_c01544  N/A  Click
20 complement(1610212..1610346)  hypothetical protein; RSPO_c01545  N/A  Click
21 complement(1610845..1611633)  PROPHAGE_Escher_CFT073: transposase/IS protein; RSPO_c01546; phage(gi26248359)  5e-81  Click
22 complement(1611630..1612655)  PROPHAGE_Escher_CFT073: transposase; RSPO_c01547; phage(gi26248360)  8e-74  Click
23 1612625..1613413  PHAGE_Stenot_S1: putative integrase; RSPO_c01548; phage(gi213163927)  7e-58  Click
24 1615931..1615942  attR    CCTCCGGTTTGC  N/A  Click
25 1622195..1622208  attR    GAATGGTGCGGCGC  N/A  Click
Region 2, total : 8 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(1690277..1691752)  PHAGE_Celeri_P12053L: putative phage tail fiber protein; RSPO_c01621; phage(gi399528893)  3e-05  Click
2 1691855..1692532  conserved hypothetical protein; RSPO_c01622  N/A  Click
3 complement(1693296..1694408)  conserved hypothetical protein; RSPO_c01623  N/A  Click
4 1694655..1694978  PHAGE_Entero_4795: putative transposase OrfA protein of IS629; RSPO_c01624; phage(gi157166062)  9e-29  Click
5 1694975..1695535  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; RSPO_c01625; phage(gi157166067)  1e-54  Click
6 1695590..1696615  PROPHAGE_Escher_CFT073: transposase; RSPO_c01626; phage(gi26248360)  8e-74  Click
7 1696612..1697400  PROPHAGE_Escher_CFT073: transposase/IS protein; RSPO_c01627; phage(gi26248359)  7e-82  Click
8 1697483..1697851  PHAGE_Entero_4795: putative transposase OrfB protein of IS629; RSPO_c01628; phage(gi157166063)  1e-34  Click