Definition Shewanella baltica OS117, complete genome.
Accession CP002811
Length 5,242,964
Summary Detailed summary Map Image Text file for download

Legend

Hits against Virus and prophage DB
Hits against Bacterial DB or GenBank file
Region 1, total : 54 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 1547148..1547193  attL    TTGGTGGAGGCGGCGGGACTTGAACCCGCGTCCAGAACACCTACAT  N/A  Click
2 1547776..1549278  Integrase catalytic region; Sbal117_1356  N/A  Click
3 1549268..1550014  PROPHAGE_Escher_CFT073: transposase/IS protein; Sbal117_1357; phage(gi26248359)  2e-35  Click
4 1550434..1550934  transposase ISSba13 protein; Sbal117_1358  N/A  Click
5 1550940..1551989  PROPHAGE_Escher_CFT073: transposase insF; Sbal117_1359; phage(gi26249410)  8e-14  Click
6 complement(1551943..1552092)  hypothetical protein; Sbal117_1360  N/A  Click
7 1552284..1552625  hypothetical protein; Sbal117_1361  N/A  Click
8 1552696..1553136  helix-turn-helix domain protein; Sbal117_1362  N/A  Click
9 complement(1553095..1553262)  hypothetical protein; Sbal117_1363  N/A  Click
10 complement(1553265..1554074)  PHAGE_Staphy_phiN315: hypothetical protein SA1795; Sbal117_1364; phage(gi30043973)  3e-05  Click
11 complement(1554071..1555120)  PROPHAGE_Escher_CFT073: transposase insF; Sbal117_1365; phage(gi26249410)  8e-14  Click
12 complement(1555126..1555626)  transposase ISSba13 protein; Sbal117_1366  N/A  Click
13 complement(1555671..1556168)  PHAGE_Lactoc_1: ORF54; Sbal117_1367; phage(gi13786585)  3e-07  Click
14 1556445..1557392  PROPHAGE_Neisse_MC58: IS30 family transposase; Sbal117_1368; phage(gi15677611)  2e-68  Click
15 complement(1557346..1557963)  BRCT domain protein; Sbal117_1369  N/A  Click
16 1558096..1559037  PROPHAGE_Neisse_MC58: IS30 family transposase; Sbal117_1370; phage(gi15677611)  6e-60  Click
17 complement(1559073..1559774)  PHAGE_Pasteu_F108: CI; Sbal117_1371; phage(gi109302899)  1e-13  Click
18 1559868..1560068  PHAGE_Aeromo_phiO18P: putative cox protein; Sbal117_1372; phage(gi148727134)  4e-10  Click
19 1560184..1560750  PHAGE_Aeromo_phiO18P: putative cII protein; Sbal117_1373; phage(gi148727135)  7e-19  Click
20 1560760..1560954  hypothetical protein; Sbal117_1374  N/A  Click
21 1560994..1561233  hypothetical protein; Sbal117_1375  N/A  Click
22 1561235..1561501  hypothetical protein; Sbal117_1376  N/A  Click
23 1561498..1561743  PHAGE_Vibrio_VHML: ORF53; Sbal117_1377; phage(gi27311221)  4e-06  Click
24 1561740..1561979  hypothetical protein; Sbal117_1378  N/A  Click
25 1561976..1562230  hypothetical protein; Sbal117_1379  N/A  Click
26 1562230..1564461  PHAGE_Haemop_HP1: replication protein; Sbal117_1380; phage(gi9628613)  8e-76  Click
27 1564971..1565144  hypothetical protein; Sbal117_1381  N/A  Click
28 1565260..1565400  hypothetical protein; Sbal117_1382  N/A  Click
29 complement(1565397..1565645)  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_19; Sbal117_1383; phage(gi148727148)  4e-18  Click
30 1565718..1565987  hypothetical protein; Sbal117_1384  N/A  Click
31 1566224..1566478  prevent-host-death family protein; Sbal117_1385  N/A  Click
32 1566489..1566845  hypothetical protein; Sbal117_1386  N/A  Click
33 complement(1566870..1567910)  PHAGE_Aeromo_phiO18P: putative portal protein; Sbal117_1387; phage(gi148727149)  2e-90  Click
34 complement(1567892..1569700)  PHAGE_Aeromo_phiO18P: putative terminase large subunit; Sbal117_1388; phage(gi148727151)  0.0  Click
35 1569904..1570830  PHAGE_Aeromo_phiO18P: putative capsid scaffolding protein; Sbal117_1389; phage(gi148727152)  8e-52  Click
36 1570880..1571923  PHAGE_Aeromo_phiO18P: putative major capsid protein; Sbal117_1390; phage(gi148727153)  6e-101  Click
37 1572001..1572591  PHAGE_Lactob_1: putative tail fibre protein; Sbal117_1391; phage(gi226377752)  2e-05  Click
38 1572885..1573283  PHAGE_Aeromo_phiO18P: putative terminase small subunit; Sbal117_1392; phage(gi148727154)  5e-28  Click
39 1573439..1573900  PHAGE_Aeromo_phiO18P: putative head completion protein; Sbal117_1393; phage(gi148727155)  4e-07  Click
40 1573897..1574385  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_27; Sbal117_1394; phage(gi148727156)  2e-13  Click
41 1574382..1575044  PHAGE_Aeromo_phiO18P: putative tail completion protein; Sbal117_1395; phage(gi148727157)  6e-18  Click
42 1575047..1576153  PHAGE_Aeromo_phiO18P: putative tail sheath protein; Sbal117_1396; phage(gi148727158)  3e-87  Click
43 1576166..1576615  PHAGE_Aeromo_phiO18P: putative tail tube protein; Sbal117_1397; phage(gi148727159)  2e-40  Click
44 1576629..1576832  PHAGE_Acinet_133: conserved hypothetical bacterial protein; Sbal117_1398; phage(gi326536256)  8e-07  Click
45 1576834..1577325  PHAGE_Salmon_SPN9CC: phage lysozyme; Sbal117_1399; phage(gi389060531)  8e-30  Click
46 1577309..1577866  hypothetical protein; Sbal117_1400  N/A  Click
47 1577917..1578207  PHAGE_Burkho_phiE125: putative class II holin; Sbal117_1401; phage(gi17975185)  1e-06  Click
48 1578204..1578470  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_36; Sbal117_1402; phage(gi148727164)  4e-09  Click
49 1578512..1578658  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_37; Sbal117_1403; phage(gi148727165)  4e-08  Click
50 1578673..1580445  PHAGE_Aeromo_phiO18P: putative tail tape measure protein; Sbal117_1404; phage(gi148727166)  6e-126  Click
51 1580442..1580774  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_39; Sbal117_1405; phage(gi148727167)  2e-15  Click
52 1580774..1581976  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_40; Sbal117_1406; phage(gi148727168)  3e-90  Click
53 1581973..1582605  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_41; Sbal117_1407; phage(gi148727169)  3e-24  Click
54 1582623..1584929  PHAGE_Aeromo_phiO18P: putative tail fiber protein; Sbal117_1408; phage(gi158518662)  7e-40  Click
55 1584930..1585427  PHAGE_Aeromo_phiO18P: hypothetical protein phiO18_45; Sbal117_1409; phage(gi148727174)  4e-27  Click
56 1587529..1587574  attR    TTGGTGGAGGCGGCGGGACTTGAACCCGCGTCCAGAACACCTACAT  N/A  Click
Region 2, total : 17 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 complement(2614748..2615338)  PHAGE_Entero_P1: Cin; Sbal117_2287; phage(gi46401653)  1e-24  Click
2 2615499..2618483  PROPHAGE_Xantho_33913: Tn5041 transposase; Sbal117_2288; phage(gi21231545)  2e-31  Click
3 2618485..2619315  PHAGE_Entero_If1: hypothetical protein If1p10; Sbal117_2289; phage(gi9630757)  8e-100  Click
4 2619329..2619652  Helix-destabilizing protein; Sbal117_2290  N/A  Click
5 2619665..2619763  hypothetical protein; Sbal117_2291  N/A  Click
6 2620088..2620336  hypothetical protein; Sbal117_2292  N/A  Click
7 2620338..2620577  PHAGE_Vibrio_Vf33: Vpf81; Sbal117_2293; phage(gi49248523)  7e-08  Click
8 2620607..2620741  PHAGE_Vibrio_VGJphi: putative major capsid protein; Sbal117_2294; phage(gi30039747)  4e-05  Click
9 2620855..2622423  PHAGE_Vibrio_Vf33: Vpf491; Sbal117_2295; phage(gi49248525)  2e-07  Click
10 2622425..2622742  PHAGE_Vibrio_Vf33: Vpf104; Sbal117_2296; phage(gi49248526)  7e-19  Click
11 2622739..2623884  PHAGE_Vibrio_Vf33: Vpf380; Sbal117_2297; phage(gi49248527)  2e-54  Click
12 2624177..2624350  PHAGE_Entero_T5: hypothetical protein T5.104; Sbal117_2298; phage(gi46401840)  2e-06  Click
13 2624356..2624547  hypothetical protein; Sbal117_2299  N/A  Click
14 complement(2624856..2625074)  hypothetical protein; Sbal117_2300  N/A  Click
15 complement(2625078..2625302)  hypothetical protein; Sbal117_2301  N/A  Click
16 complement(2625766..2625948)  phage protein; Sbal117_2302  N/A  Click
17 2626073..2627725  PHAGE_Entero_Ike: G II protein; Sbal117_2303; phage(gi9626233)  3e-67  Click
Region 3, total : 47 CDS
# CDS_POSITION BLAST_HIT E-VALUE SEQUENCE
1 4305642..4306709  PHAGE_Entero_mEp460: integrase; Sbal117_3729; phage(gi428782338)  2e-103  Click
2 4306816..4307046  hypothetical protein; Sbal117_3730  N/A  Click
3 complement(4307043..4307255)  PHAGE_Stenot_S1: hypothetical protein StPS1_gp22; Sbal117_3731; phage(gi213163921)  2e-05  Click
4 complement(4307281..4309041)  PHAGE_Stenot_S1: putative tail protein c; Sbal117_3732; phage(gi213163920)  3e-26  Click
5 complement(4309038..4309325)  hypothetical protein; Sbal117_3733  N/A  Click
6 complement(4309318..4310271)  PHAGE_Stenot_S1: hypothetical protein StPS1_gp20; Sbal117_3734; phage(gi213163919)  3e-09  Click
7 complement(4310284..4312782)  PHAGE_Stenot_S1: putative tail protein b; Sbal117_3735; phage(gi213163918)  1e-38  Click
8 complement(4312790..4313161)  hypothetical protein; Sbal117_3736  N/A  Click
9 complement(4313200..4317480)  PHAGE_Strept_phi3396: putative phage-related tail tape measure protein; Sbal117_3737; phage(gi126011107)  2e-44  Click
10 complement(4317573..4318292)  PHAGE_Pseudo_F10: hypothetical protein PPF10_gp010; Sbal117_3738; phage(gi148912775)  2e-15  Click
11 complement(4318289..4318714)  hypothetical protein; Sbal117_3739  N/A  Click
12 complement(4318748..4319305)  hypothetical protein; Sbal117_3740  N/A  Click
13 complement(4319309..4319653)  hypothetical protein; Sbal117_3741  N/A  Click
14 complement(4319646..4319969)  PHAGE_Entero_mEp460: hypothetical protein; Sbal117_3742; phage(gi428782322)  4e-14  Click
15 complement(4320050..4322056)  PHAGE_Entero_mEp460: putative protease/scaffold protein; Sbal117_3743; phage(gi428782321)  0.0  Click
16 complement(4322028..4323602)  PHAGE_Entero_mEp460: portal protein; Sbal117_3744; phage(gi428782320)  1e-127  Click
17 complement(4323652..4323858)  PHAGE_Entero_mEp460: hypothetical protein; Sbal117_3745; phage(gi428782319)  2e-10  Click
18 complement(4323888..4325885)  PHAGE_Pseudo_F10: Putative large subunit (GpA homolog) of DNA packaging dimer; Sbal117_3746; phage(gi148912767)  0.0  Click
19 complement(4325860..4326393)  PHAGE_Entero_N15: gp1; Sbal117_3747; phage(gi9630465)  2e-37  Click
20 complement(4326347..4326682)  PHAGE_Bacter_2: phage 21-like group II holin; Sbal117_3748; phage(gi212499716)  5e-05  Click
21 complement(4326793..4327296)  PHAGE_Burkho_phiE202: gp42, protein LysB; Sbal117_3749; phage(gi134288770)  1e-04  Click
22 complement(4327277..4327810)  PHAGE_Xantho_OP1: putative lysozyme; Sbal117_3750; phage(gi84662620)  4e-22  Click
23 complement(4328254..4328934)  hypothetical protein; Sbal117_3751  N/A  Click
24 complement(4329256..4329870)  PHAGE_Ectoca_1: EsV-1-139; Sbal117_3752; phage(gi13242610)  2e-08  Click
25 complement(4329879..4330232)  hypothetical protein; Sbal117_3753  N/A  Click
26 complement(4330219..4330437)  helix-turn-helix domain protein; Sbal117_3754  N/A  Click
27 complement(4330493..4331749)  PHAGE_Entero_mEp237: integrase; Sbal117_3755; phage(gi435439292)  5e-07  Click
28 complement(4331739..4332422)  PHAGE_Pseudo_PAJU2: putative replication protein P; Sbal117_3756; phage(gi209552483)  4e-21  Click
29 complement(4332419..4333168)  PHAGE_Entero_mEp460: replication protein; Sbal117_3757; phage(gi428782359)  1e-37  Click
30 4333327..4333605  hypothetical protein; Sbal117_3758  N/A  Click
31 complement(4333763..4334089)  PHAGE_Vibrio_SIO_2: hypothetical protein; Sbal117_3759; phage(gi371496373)  3e-08  Click
32 complement(4334095..4334718)  PHAGE_Pseudo_phi297: hypothetical protein; Sbal117_3760; phage(gi374531276)  6e-11  Click
33 complement(4334750..4334953)  PHAGE_Salico_CGphi29: hypothetical protein; Sbal117_3761; phage(gi472340163)  2e-08  Click
34 4335013..4335735  PHAGE_Haemop_Aaphi23: putative CI protein; Sbal117_3762; phage(gi31544010)  3e-47  Click
35 4335758..4335769  attL    ATAAATCAGATA  N/A  Click
36 complement(4337840..4338586)  PROPHAGE_Escher_CFT073: transposase/IS protein; Sbal117_3765; phage(gi26248359)  2e-35  Click
37 complement(4338576..4340078)  Integrase catalytic region; Sbal117_3766  N/A  Click
38 complement(4340281..4341440)  PROPHAGE_Shewan_MR-1: ISSod1, transposase OrfB; Sbal117_3767; phage(gi24373866)  2e-149  Click
39 complement(4342263..4343366)  PHAGE_Microm_12T: ATP-dependent metalloprotease FtsH; Sbal117_3768; phage(gi472342809)  1e-15  Click
40 4343786..4344139  hypothetical protein; Sbal117_3769  N/A  Click
41 4344136..4344396  PHAGE_Entero_mEp460: hypothetical protein; Sbal117_3770; phage(gi428782341)  5e-14  Click
42 4344422..4344769  hypothetical protein; Sbal117_3771  N/A  Click
43 4344800..4345078  hypothetical protein; Sbal117_3772  N/A  Click
44 4345079..4345357  hypothetical protein; Sbal117_3773  N/A  Click
45 4345354..4345584  hypothetical protein; Sbal117_3774  N/A  Click
46 4345581..4345919  PHAGE_Entero_mEp213: hypothetical protein; Sbal117_3775; phage(gi428782634)  3e-12  Click
47 4345947..4346447  transposase ISSba13 protein; Sbal117_3776  N/A  Click
48 4346453..4347502  PROPHAGE_Escher_CFT073: transposase insF; Sbal117_3777; phage(gi26249410)  8e-14  Click
49 4351035..4351046  attR    ATAAATCAGATA  N/A  Click