| Definition | Xanthomonas campestris pv. raphani 756C, complete genome. |
|---|---|
| Accession | CP002789 |
| Length | 4,941,214 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 10 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2084219..2098417 | PHAGE_Invert_6: 443R; XCR_2038; phage(gi15079154) | 3e-42 | Click |
| 2 | 2098821..2098958 | hypothetical protein; XCR_2039 | N/A | Click |
| 3 | 2099005..2099130 | conserved hypothetical protein; XCR_2040 | N/A | Click |
| 4 | complement(2099750..2099902) | conserved hypothetical protein; XCR_2041 | N/A | Click |
| 5 | complement(2100317..2101162) | PROPHAGE_Xantho_33913: IS1404 transposase; XCR_2042; phage(gi21232569) | 2e-161 | Click |
| 6 | complement(2101156..2101419) | PROPHAGE_Xantho_33913: IS1404 transposase; XCR_2043; phage(gi21232568) | 1e-44 | Click |
| 7 | complement(2101400..2107060) | PHAGE_Pectob_My1: YadA domain-containing protein; XCR_2044; phage(gi410491156) | 3e-21 | Click |
| 8 | 2107398..2107553 | conserved hypothetical protein; XCR_2045 | N/A | Click |
| 9 | 2107602..2107865 | PROPHAGE_Xantho_33913: IS1404 transposase; XCR_2046; phage(gi21232568) | 1e-44 | Click |
| 10 | 2107859..2108704 | PROPHAGE_Xantho_33913: IS1404 transposase; XCR_2047; phage(gi21232569) | 4e-159 | Click |
Region 2, total : 10 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2459866..2459877 | attL TGTGCAGCATCG | N/A | Click |
| 2 | 2460120..2461160 | PHAGE_Xantho_Cf1c: Probable site-specific integrase; XCR_2349; phage(gi17975748) | 0.0 | Click |
| 3 | 2461157..2461453 | PHAGE_Xantho_Cf1c: V protein; XCR_2350; phage(gi17975750) | 8e-49 | Click |
| 4 | 2461457..2461660 | putative membrane protein; XCR_2351 | N/A | Click |
| 5 | 2461672..2461902 | PHAGE_Ralsto_PE226: putative major coat protein; XCR_2352; phage(gi327198632) | 1e-05 | Click |
| 6 | 2461986..2463446 | PHAGE_Xantho_Cf1c: A coat protein; XCR_2353; phage(gi17975746) | 4e-24 | Click |
| 7 | 2463446..2463775 | putative membrane protein; XCR_2354 | N/A | Click |
| 8 | 2463829..2465010 | PHAGE_Xantho_Cf1c: hypothetical protein Cf1cp4; XCR_2355; phage(gi9626134) | 2e-43 | Click |
| 9 | 2465012..2465674 | PHAGE_Xantho_Cf1c: hypothetical protein Cf1cp5; XCR_2356; phage(gi17975752) | 4e-62 | Click |
| 10 | complement(2466541..2467191) | PHAGE_Xantho_Cf1c: hypothetical protein Cf1cp5; XCR_2357; phage(gi17975752) | 4e-54 | Click |
| 11 | complement(2467320..2469113) | PHAGE_Macaci_1: large tegument protein; XCR_2358; phage(gi30984464) | 8e-17 | Click |
| 12 | 2480378..2480389 | attR TGTGCAGCATCG | N/A | Click |
Region 3, total : 9 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 4364505..4368086 | PHAGE_Celeri_P12053L: putative phage tail fiber protein; XCR_4079; phage(gi399528893) | 9e-05 | Click |
| 2 | 4368264..4369352 | pyruvate dehydrogenase E1 alpha subunit; XCR_4080 | N/A | Click |
| 3 | 4369345..4370415 | PHAGE_Synech_S_SM2: transketolase central region-containing protein; XCR_4081; phage(gi326781943) | 6e-06 | Click |
| 4 | 4370417..4370800 | variant SH3 domain protein; XCR_4082 | N/A | Click |
| 5 | 4370797..4372263 | PHAGE_Gifsy_2: bacteriophage side tail fiber protein; Lambda gpStf (gpN) homolog; XCR_4083; phage(gi169257320) | 8e-05 | Click |
| 6 | complement(4372382..4372558) | PROPHAGE_Xantho_33913: IS1479 transposase; XCR_4084; phage(gi21229605) | 2e-15 | Click |
| 7 | complement(4372685..4372897) | PROPHAGE_Xantho_33913: IS1479 transposase; XCR_4085; phage(gi21229605) | 6e-25 | Click |
| 8 | complement(4373065..4373328) | type III effector candidate XopAR; XCR_4085a | N/A | Click |
| 9 | 4374542..4375762 | PHAGE_Cafete_BV_PW1: putative superfamily II helicase/eIF-4AIII; XCR_4086; phage(gi310831360) | 9e-33 | Click |