| Definition | Lactobacillus casei BD-II, complete genome. |
|---|---|
| Accession | CP002618 |
| Length | 3,069,926 |
Legend
| Hits against Virus and prophage DB | |
| Hits against Bacterial DB or GenBank file |
Region 1, total : 61 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 543065..544507 | Integrase core domain protein; LCBD_0534 | N/A | Click |
| 2 | complement(544617..545120) | Conserved protein; LCBD_0535 | N/A | Click |
| 3 | complement(545299..546192) | PHAGE_Burkho_phi1026b: gp58; LCBD_0536; phage(gi38707948) | 8e-06 | Click |
| 4 | 546626..547213 | Xylose isomerase domain protein TIM barrel; LCBD_0537 | N/A | Click |
| 5 | 547230..547730 | Rhamnulose-1-phosphate aldolase/alcohol dehydrogenase; LCBD_0538 | N/A | Click |
| 6 | 547732..548064 | hypothetical protein; LCBD_0539 | N/A | Click |
| 7 | complement(548039..548155) | hypothetical protein; LCBD_0540 | N/A | Click |
| 8 | 548161..549051 | Shikimate dehydrogenase; LCBD_0541 | N/A | Click |
| 9 | 549085..550302 | Putative transporter; MFS superfamily; LCBD_0542 | N/A | Click |
| 10 | 550321..551220 | Shikimate dehydrogenase; LCBD_0543 | N/A | Click |
| 11 | 551192..551311 | Hypothetical cytosolic protein; LCBD_0544 | N/A | Click |
| 12 | 551665..552480 | Homoserine O-succinyltransferase; LCBD_0545 | N/A | Click |
| 13 | 552514..553443 | PHAGE_Lactoc_P087: putative cysteine synthase; LCBD_0546; phage(gi229605000) | 9e-90 | Click |
| 14 | complement(553637..554182) | Hydrophobic protein; LCBD_0547 | N/A | Click |
| 15 | 554304..554375 | tRNA | N/A | Click |
| 16 | complement(554503..555672) | PHAGE_Lactob_phiAT3: putative integrase; LCBD_0548; phage(gi48697280) | 0.0 | Click |
| 17 | complement(555785..556045) | PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF33; LCBD_0549; phage(gi48697293) | 2e-10 | Click |
| 18 | 556135..556755 | hypothetical protein; LCBD_0550 | N/A | Click |
| 19 | complement(556739..556975) | hypothetical protein; LCBD_0551 | N/A | Click |
| 20 | complement(556976..557083) | Hypothetical cytosolic protein; LCBD_0552 | N/A | Click |
| 21 | complement(557168..557875) | PHAGE_Lister_A118: gp34; LCBD_0553; phage(gi16798817) | 5e-07 | Click |
| 22 | complement(558034..558456) | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1458; LCBD_0554; phage(gi41179295) | 3e-12 | Click |
| 23 | complement(558449..558802) | PHAGE_Entero_phiFL3A: CI phage repressor protein; LCBD_0555; phage(gi281416216) | 1e-17 | Click |
| 24 | 559046..559294 | hypothetical protein; LCBD_0556 | N/A | Click |
| 25 | 559336..559536 | hypothetical protein; LCBD_0557 | N/A | Click |
| 26 | complement(559507..560340) | hypothetical protein; LCBD_0558 | N/A | Click |
| 27 | 560401..561159 | PHAGE_Lactoc_bIL285: anti-repressor; LCBD_0559; phage(gi13095686) | 7e-42 | Click |
| 28 | 561160..561339 | hypothetical protein; LCBD_0560 | N/A | Click |
| 29 | complement(561332..561583) | hypothetical protein; LCBD_0561 | N/A | Click |
| 30 | 561649..562005 | PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF25; LCBD_0562; phage(gi48697285) | 1e-63 | Click |
| 31 | 562005..562097 | Hypothetical cytosolic protein; LCBD_0563 | N/A | Click |
| 32 | 562090..562293 | hypothetical protein; LCBD_0564 | N/A | Click |
| 33 | complement(562276..562821) | hypothetical protein; LCBD_0565 | N/A | Click |
| 34 | complement(562883..563050) | Hypothetical cytosolic protein; LCBD_0566 | N/A | Click |
| 35 | 563002..563316 | hypothetical protein; LCBD_0567 | N/A | Click |
| 36 | 563309..564055 | PHAGE_Lactob_c5: putative DNA replication protein; LCBD_0568; phage(gi418488187) | 1e-29 | Click |
| 37 | 564070..564894 | PHAGE_Lactoc_r1t: putative replication protein DnaC; LCBD_0569; phage(gi23455731) | 4e-15 | Click |
| 38 | 564894..565412 | DNA polymerase III alpha subunit; LCBD_0570 | N/A | Click |
| 39 | 565459..565881 | PHAGE_Strept_phiNJ2: hypothetical protein; LCBD_0571; phage(gi414090240) | 3e-18 | Click |
| 40 | 565883..566620 | PHAGE_Clostr_phiCD38_2: hypothetical protein; LCBD_0572; phage(gi333798150) | 3e-39 | Click |
| 41 | 566632..566919 | PHAGE_Lactob_A2: hypothetical protein A2p52; LCBD_0573; phage(gi22296571) | 3e-40 | Click |
| 42 | 566989..567321 | hypothetical protein; LCBD_0574 | N/A | Click |
| 43 | complement(567274..567519) | hypothetical protein; LCBD_0575 | N/A | Click |
| 44 | 567836..568279 | PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF47; LCBD_0576; phage(gi48697307) | 6e-47 | Click |
| 45 | 568280..568291 | attL TGCAACAAAAAA | N/A | Click |
| 46 | 568793..569446 | hypothetical protein; LCBD_0577 | N/A | Click |
| 47 | 569697..570695 | PHAGE_Staphy_phiPV83: transposase; LCBD_0578; phage(gi9635740) | 1e-57 | Click |
| 48 | complement(570891..571109) | PHAGE_Lactob_LF1: hypothetical protein; LCBD_0579; phage(gi418489439) | 2e-20 | Click |
| 49 | 571158..571169 | attR TGCAACAAAAAA | N/A | Click |
| 50 | 571532..572362 | PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF50; LCBD_0580; phage(gi48697310) | 8e-101 | Click |
| 51 | 572356..572655 | PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF50; LCBD_0581; phage(gi48697310) | 2e-54 | Click |
| 52 | 572660..572977 | PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF52; LCBD_0582; phage(gi48697312) | 3e-44 | Click |
| 53 | 572974..573084 | hypothetical protein; LCBD_0583 | N/A | Click |
| 54 | 573118..573429 | PHAGE_Lactob_phiAT3: putative transposase A; LCBD_0584; phage(gi48697273) | 5e-08 | Click |
| 55 | 573459..574187 | PROPHAGE_Ralsto_GMI1000: ISRSO11-transposase ORFA protein; LCBD_0585; phage(gi17546156) | 7e-07 | Click |
| 56 | 574184..575062 | PROPHAGE_Escher_CFT073: transposase insF; LCBD_0586; phage(gi26249410) | 4e-24 | Click |
| 57 | 575141..575971 | PHAGE_Lactob_phiAT3: putative transposase B; LCBD_0587; phage(gi48697274) | 4e-28 | Click |
| 58 | 576286..576444 | hypothetical protein; LCBD_0588 | N/A | Click |
| 59 | 576533..576979 | hypothetical protein; LCBD_0589 | N/A | Click |
| 60 | 576991..577257 | hypothetical protein; LCBD_0590 | N/A | Click |
| 61 | 577276..577452 | hypothetical protein; LCBD_0591 | N/A | Click |
| 62 | 577454..577681 | hypothetical protein; LCBD_0592 | N/A | Click |
| 63 | 577724..578965 | hypothetical protein; LCBD_0593 | N/A | Click |
| 64 | 578943..580493 | PHAGE_Achole_L2: envelope protein; LCBD_0594; phage(gi9626524) | 1e-11 | Click |
Region 2, total : 54 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 913163..913174 | attL GTTTCTAACCGC | N/A | Click |
| 2 | 913285..913296 | attL TCCGGTTTCTAA | N/A | Click |
| 3 | complement(920789..921928) | PHAGE_Lactob_Lrm1: integrase; LCBD_0937; phage(gi195661224) | 7e-82 | Click |
| 4 | complement(922046..923113) | Abi-like protein; LCBD_0938 | N/A | Click |
| 5 | complement(923258..923689) | hypothetical protein; LCBD_0939 | N/A | Click |
| 6 | complement(923759..924241) | hypothetical protein; LCBD_0940 | N/A | Click |
| 7 | complement(924245..924538) | hypothetical protein; LCBD_0941 | N/A | Click |
| 8 | complement(924722..925582) | hypothetical protein; LCBD_0942 | N/A | Click |
| 9 | complement(925569..925937) | PHAGE_Lister_2389: Rep protein; LCBD_0943; phage(gi17488532) | 5e-05 | Click |
| 10 | 926193..926390 | hypothetical protein; LCBD_0944 | N/A | Click |
| 11 | 926387..927109 | PHAGE_Lactob_phiadh: hypothetical protein phiadhp07; LCBD_0945; phage(gi9633007) | 4e-38 | Click |
| 12 | 927438..927662 | PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF25; LCBD_0946; phage(gi48697285) | 8e-06 | Click |
| 13 | 927662..927754 | Hypothetical cytosolic protein; LCBD_0947 | N/A | Click |
| 14 | 927751..927963 | hypothetical protein; LCBD_0948 | N/A | Click |
| 15 | 927973..928848 | PHAGE_Entero_phiFL1A: endonuclease YqaJ superfamily; LCBD_0949; phage(gi281416339) | 3e-62 | Click |
| 16 | 928851..929045 | hypothetical protein; LCBD_0950 | N/A | Click |
| 17 | 929045..929932 | PHAGE_Lister_A006: gp42; LCBD_0951; phage(gi157325459) | 1e-61 | Click |
| 18 | 929941..930186 | PHAGE_Lactoc_lato: hypothetical protein P335p08; LCBD_0952; phage(gi30089869) | 4e-14 | Click |
| 19 | 930191..931036 | PHAGE_Lister_A118: gp49; LCBD_0953; phage(gi16798836) | 1e-48 | Click |
| 20 | 931074..931895 | PHAGE_Lactoc_lato: putative DnaC protein; LCBD_0954; phage(gi30089873) | 4e-18 | Click |
| 21 | 931892..932191 | hypothetical protein; LCBD_0955 | N/A | Click |
| 22 | 932157..932438 | PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; LCBD_0956; phage(gi399528947) | 1e-13 | Click |
| 23 | 932407..932754 | hypothetical protein; LCBD_0957 | N/A | Click |
| 24 | 932747..933325 | PHAGE_Bacill_phBC6A51: hypothetical protein BC1875; LCBD_0958; phage(gi31415769) | 3e-19 | Click |
| 25 | 933339..933761 | PHAGE_Lactob_Nu: putative Holliday junction resolvase; LCBD_0959; phage(gi78000012) | 6e-43 | Click |
| 26 | 933766..934029 | hypothetical protein; LCBD_0960 | N/A | Click |
| 27 | 934053..934376 | hypothetical protein; LCBD_0961 | N/A | Click |
| 28 | 934455..934904 | PHAGE_Bacill_WBeta: conserved phage protein; LCBD_0962; phage(gi85701424) | 1e-23 | Click |
| 29 | 935126..935509 | PHAGE_Clostr_phiMMP04: HNH endonuclease; LCBD_0963; phage(gi414090491) | 1e-14 | Click |
| 30 | 935579..935953 | hypothetical protein; LCBD_0964 | N/A | Click |
| 31 | 935956..937686 | PHAGE_Clostr_phiMMP04: terminase; LCBD_0965; phage(gi414090443) | 6e-126 | Click |
| 32 | 937705..938940 | PHAGE_Clostr_phiMMP04: phage portal protein; LCBD_0966; phage(gi414090444) | 6e-115 | Click |
| 33 | 938918..939625 | PHAGE_Lactoc_bIL286: protease; LCBD_0967; phage(gi13095787) | 5e-45 | Click |
| 34 | 939630..940859 | PHAGE_Clostr_phiMMP04: major capsid protein; LCBD_0968; phage(gi414090446) | 1e-72 | Click |
| 35 | 940933..941181 | hypothetical protein; LCBD_0969 | N/A | Click |
| 36 | 941195..941521 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2588; LCBD_0970; phage(gi31415853) | 3e-10 | Click |
| 37 | 941511..941798 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2589; LCBD_0971; phage(gi31415854) | 4e-06 | Click |
| 38 | 941782..942111 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2590; LCBD_0972; phage(gi31415855) | 3e-11 | Click |
| 39 | 942101..942484 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2591; LCBD_0973; phage(gi31415856) | 2e-11 | Click |
| 40 | 942496..943143 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2592; LCBD_0974; phage(gi31415857) | 6e-12 | Click |
| 41 | 943220..943585 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2593; LCBD_0975; phage(gi31415858) | 9e-21 | Click |
| 42 | 943666..943827 | hypothetical protein; LCBD_0976 | N/A | Click |
| 43 | 943847..946819 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2594; LCBD_0977; phage(gi31415859) | 2e-78 | Click |
| 44 | 946826..947521 | PHAGE_Bacill_phBC6A52: Gp13 protein; LCBD_0978; phage(gi31415860) | 5e-20 | Click |
| 45 | 947518..951924 | PHAGE_Bacill_phBC6A52: endopeptidase; LCBD_0979; phage(gi31415861) | 2e-67 | Click |
| 46 | 951953..952378 | PHAGE_Lactob_LP65: hypothetical protein LP65_gp096; LCBD_0980; phage(gi56693144) | 5e-10 | Click |
| 47 | 952381..952650 | PHAGE_Lactoc_bIL285: Orf59; LCBD_0981; phage(gi13095739) | 3e-13 | Click |
| 48 | 952696..952989 | PHAGE_Lactob_Lrm1: hypothetical protein Lrm1_gp17; LCBD_0982; phage(gi195661217) | 3e-43 | Click |
| 49 | 952979..953413 | PHAGE_Lactob_A2: holin; LCBD_0983; phage(gi22296539) | 2e-55 | Click |
| 50 | 953413..953601 | hypothetical protein; LCBD_0984 | N/A | Click |
| 51 | 953588..954562 | PHAGE_Lactob_A2: lysin; LCBD_0985; phage(gi22296540) | 2e-63 | Click |
| 52 | 955084..956595 | Glycosyl transferase group 1; LCBD_0986 | N/A | Click |
| 53 | 956623..958182 | Poly alpha-glucosyltransferase; LCBD_0987 | N/A | Click |
| 54 | 958279..958752 | PHAGE_Canary_virus: CNPV087 putative glutathione peroxidase; LCBD_0988; phage(gi40556025) | 2e-20 | Click |
| 55 | 959129..959140 | attR TCCGGTTTCTAA | N/A | Click |
| 56 | 959219..960424 | Aminotransferase, class I/II; LCBD_0989 | N/A | Click |
| 57 | complement(960441..961439) | PHAGE_Staphy_phiPV83: transposase; LCBD_0990; phage(gi9635740) | 4e-52 | Click |
| 58 | 974800..974811 | attR GTTTCTAACCGC | N/A | Click |
Region 3, total : 49 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1034479..1035069 | PHAGE_Strept_1: head maturation protease; LCBD_1060; phage(gi28876177) | 4e-13 | Click |
| 2 | 1035173..1035244 | tRNA | N/A | Click |
| 3 | 1035229..1035251 | attL ACTCCCGGGCTGCGCAGAAACCC | N/A | Click |
| 4 | complement(1035474..1036625) | PHAGE_Lactob_Lrm1: integrase; LCBD_1061; phage(gi195661224) | 2e-61 | Click |
| 5 | complement(1036736..1037497) | hypothetical protein; LCBD_1062 | N/A | Click |
| 6 | 1037516..1037746 | hypothetical protein; LCBD_1063 | N/A | Click |
| 7 | complement(1038002..1038781) | PHAGE_Mycoba_Myrna: gp260; LCBD_1064; phage(gi203454821) | 6e-06 | Click |
| 8 | complement(1038853..1039257) | PHAGE_Lactob_LF1: Lj965 prophage repressor-like protein; LCBD_1065; phage(gi418489418) | 5e-16 | Click |
| 9 | complement(1039254..1039580) | PHAGE_Entero_phiFL3A: CI phage repressor protein; LCBD_1066; phage(gi281416216) | 2e-23 | Click |
| 10 | 1039837..1040034 | hypothetical protein; LCBD_1067 | N/A | Click |
| 11 | 1040051..1040824 | PHAGE_Brocho_BL3: gp34; LCBD_1068; phage(gi327409426) | 3e-56 | Click |
| 12 | 1040856..1041179 | PHAGE_Lactob_A2: hypothetical protein A2p30; LCBD_1069; phage(gi22296549) | 4e-07 | Click |
| 13 | 1041179..1041310 | hypothetical protein; LCBD_1070 | N/A | Click |
| 14 | 1041324..1041458 | Hypothetical cytosolic protein; LCBD_1071 | N/A | Click |
| 15 | complement(1041447..1041758) | PHAGE_Clostr_phiC2: hypothetical protein phiC2p84; LCBD_1072; phage(gi134287416) | 7e-06 | Click |
| 16 | 1041819..1042010 | PHAGE_Lactob_Lrm1: hypothetical protein Lrm1_gp31; LCBD_1073; phage(gi195661231) | 3e-10 | Click |
| 17 | 1042024..1042263 | hypothetical protein; LCBD_1074 | N/A | Click |
| 18 | 1042268..1042762 | PHAGE_Lactob_Nu: hypothetical protein; LCBD_1075; phage(gi78000004) | 5e-30 | Click |
| 19 | 1042774..1043004 | hypothetical protein; LCBD_1076 | N/A | Click |
| 20 | 1043004..1044371 | PHAGE_Strept_O1205: putative helicase; LCBD_1077; phage(gi23455858) | 4e-116 | Click |
| 21 | 1044373..1045113 | PHAGE_Strept_PH15: putative NTP-binding protein; LCBD_1078; phage(gi190151434) | 3e-65 | Click |
| 22 | 1045116..1045625 | PHAGE_Strept_PH15: hypothetical protein phiPH15_gp20; LCBD_1079; phage(gi190151435) | 1e-08 | Click |
| 23 | 1045692..1046489 | PHAGE_Strept_5: hypothetical protein SpyM3_1341; LCBD_1080; phage(gi28876423) | 4e-59 | Click |
| 24 | 1046494..1047729 | PHAGE_Lactoc_bIL312: helicase; LCBD_1081; phage(gi13095906) | 2e-88 | Click |
| 25 | 1048004..1048318 | PHAGE_Lactob_A2: hypothetical protein A2p40; LCBD_1082; phage(gi22296559) | 2e-38 | Click |
| 26 | 1048325..1048609 | PHAGE_Staphy_vB_SepiS_phiIPLA5: hypothetical protein; LCBD_1083; phage(gi399528947) | 2e-13 | Click |
| 27 | 1048596..1048925 | hypothetical protein; LCBD_1084 | N/A | Click |
| 28 | 1048918..1049505 | PHAGE_Bacill_phBC6A51: hypothetical protein BC1875; LCBD_1085; phage(gi31415769) | 4e-19 | Click |
| 29 | 1049492..1049746 | hypothetical protein; LCBD_1086 | N/A | Click |
| 30 | 1049743..1050147 | PHAGE_Staphy_TEM123: mobile-element-associated regulatory protein; LCBD_1087; phage(gi388570351) | 9e-14 | Click |
| 31 | 1050312..1050692 | PHAGE_Clostr_phiMMP04: HNH endonuclease; LCBD_1088; phage(gi414090491) | 4e-15 | Click |
| 32 | 1050749..1051135 | hypothetical protein; LCBD_1089 | N/A | Click |
| 33 | 1051138..1052868 | PHAGE_Clostr_phiMMP04: terminase; LCBD_1090; phage(gi414090443) | 2e-126 | Click |
| 34 | 1052887..1054122 | PHAGE_Clostr_phiMMP04: phage portal protein; LCBD_1091; phage(gi414090444) | 9e-115 | Click |
| 35 | 1054100..1054807 | PHAGE_Lactoc_bIL286: protease; LCBD_1092; phage(gi13095787) | 4e-45 | Click |
| 36 | 1054812..1056041 | PHAGE_Clostr_phiMMP04: major capsid protein; LCBD_1093; phage(gi414090446) | 3e-72 | Click |
| 37 | 1056115..1056363 | hypothetical protein; LCBD_1094 | N/A | Click |
| 38 | 1056377..1056703 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2588; LCBD_1095; phage(gi31415853) | 3e-10 | Click |
| 39 | 1056693..1056980 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2589; LCBD_1096; phage(gi31415854) | 4e-06 | Click |
| 40 | 1057283..1057666 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2591; LCBD_1097; phage(gi31415856) | 2e-11 | Click |
| 41 | 1057678..1058325 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2592; LCBD_1098; phage(gi31415857) | 6e-12 | Click |
| 42 | 1058402..1058767 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2593; LCBD_1099; phage(gi31415858) | 9e-21 | Click |
| 43 | 1059030..1062200 | PHAGE_Bacill_phBC6A52: hypothetical protein BC2594; LCBD_1100; phage(gi31415859) | 4e-119 | Click |
| 44 | 1062207..1062902 | PHAGE_Bacill_phBC6A52: Gp13 protein; LCBD_1101; phage(gi31415860) | 2e-21 | Click |
| 45 | 1062899..1067302 | PHAGE_Bacill_phBC6A52: endopeptidase; LCBD_1102; phage(gi31415861) | 8e-67 | Click |
| 46 | 1067331..1067756 | PHAGE_Lactob_LP65: hypothetical protein LP65_gp096; LCBD_1103; phage(gi56693144) | 5e-10 | Click |
| 47 | 1067759..1068028 | PHAGE_Lactoc_bIL285: Orf59; LCBD_1104; phage(gi13095739) | 9e-13 | Click |
| 48 | 1068076..1068462 | PHAGE_Lactob_Nu: putative holin; LCBD_1105; phage(gi77999998) | 2e-66 | Click |
| 49 | 1068434..1068649 | PHAGE_Lactob_Nu: hypothetical protein; LCBD_1106; phage(gi78000033) | 7e-27 | Click |
| 50 | 1068646..1069107 | PHAGE_Lactob_Nu: putative holin; LCBD_1107; phage(gi78000034) | 3e-69 | Click |
| 51 | 1069109..1070161 | PHAGE_Lactob_A2: lysin; LCBD_1108; phage(gi22296540) | 0.0 | Click |
| 52 | 1070297..1070319 | attR ACTCCCGGGCTGCGCAGAAACCC | N/A | Click |
Region 4, total : 63 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1240525..1240537 | attL GCTCTTTTTGTGT | N/A | Click |
| 2 | complement(1240538..1241722) | PROPHAGE_Oceano_HTE831: integrase; LCBD_1269; phage(gi23097608) | 8e-34 | Click |
| 3 | complement(1241851..1242180) | PHAGE_Lactob_Sha1: hypothetical protein; LCBD_1270; phage(gi418489826) | 2e-05 | Click |
| 4 | complement(1242173..1242631) | hypothetical protein; LCBD_1271 | N/A | Click |
| 5 | complement(1242787..1242906) | hypothetical protein; LCBD_1272 | N/A | Click |
| 6 | complement(1242930..1243355) | Pyridoxamine 5'-phosphate oxidase; LCBD_1273 | N/A | Click |
| 7 | complement(1243454..1244347) | hypothetical protein; LCBD_1274 | N/A | Click |
| 8 | complement(1244398..1245741) | PHAGE_Entero_ES18: gp19; LCBD_1275; phage(gi62362232) | 1e-72 | Click |
| 9 | complement(1245831..1246181) | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1464; LCBD_1276; phage(gi41179289) | 7e-18 | Click |
| 10 | complement(1246238..1246816) | hypothetical protein; LCBD_1277 | N/A | Click |
| 11 | complement(1246875..1247294) | PHAGE_Lactob_LF1: Lj965 prophage repressor-like protein; LCBD_1278; phage(gi418489418) | 6e-16 | Click |
| 12 | complement(1247284..1247622) | PHAGE_Lactob_LF1: xre family toxin-antitoxin system; LCBD_1279; phage(gi418489419) | 1e-14 | Click |
| 13 | 1247762..1247962 | PHAGE_Lister_A118: putative repressor protein; LCBD_1280; phage(gi16798820) | 5e-11 | Click |
| 14 | 1247999..1248310 | PHAGE_Entero_phiFL3A: hypothetical protein; LCBD_1281; phage(gi281416223) | 2e-06 | Click |
| 15 | 1248604..1248750 | hypothetical protein; LCBD_1282 | N/A | Click |
| 16 | 1248816..1249364 | hypothetical protein; LCBD_1283 | N/A | Click |
| 17 | 1249577..1249705 | hypothetical protein; LCBD_1284 | N/A | Click |
| 18 | 1249693..1249812 | Conserved protein; LCBD_1285 | N/A | Click |
| 19 | 1249796..1250212 | hypothetical protein; LCBD_1286 | N/A | Click |
| 20 | 1250225..1251088 | PHAGE_Lister_A118: putative recombinase; LCBD_1287; phage(gi16798835) | 5e-58 | Click |
| 21 | 1251069..1251869 | PHAGE_Strept_3: hypothetical protein SpyM3_1132; LCBD_1288; phage(gi28876302) | 6e-52 | Click |
| 22 | 1251885..1252850 | PHAGE_Lister_A500: gp45; LCBD_1289; phage(gi157325004) | 4e-22 | Click |
| 23 | complement(1252977..1253357) | PHAGE_Staphy_69: ORF039; LCBD_1290; phage(gi66395329) | 4e-13 | Click |
| 24 | 1253692..1253904 | PHAGE_Lactob_Lj928: hypothetical protein Ljo_1453; LCBD_1291; phage(gi41179300) | 4e-08 | Click |
| 25 | 1253901..1254350 | PHAGE_Lactob_phiAT3: hypothetical protein phiAT3gORF33; LCBD_1292; phage(gi48697293) | 2e-56 | Click |
| 26 | 1254397..1254651 | PHAGE_Lactob_Nu: hypothetical protein; LCBD_1293; phage(gi78000011) | 2e-37 | Click |
| 27 | 1254648..1255013 | PHAGE_Lister_A118: gp63; LCBD_1294; phage(gi16798850) | 8e-25 | Click |
| 28 | 1255026..1255319 | hypothetical protein; LCBD_1295 | N/A | Click |
| 29 | 1255325..1255522 | hypothetical protein; LCBD_1296 | N/A | Click |
| 30 | 1255893..1256336 | PHAGE_Lactob_Lrm1: hypothetical protein Lrm1_gp49; LCBD_1297; phage(gi195661249) | 2e-58 | Click |
| 31 | 1256800..1256872 | tRNA | N/A | Click |
| 32 | 1256932..1257312 | PHAGE_Lactob_A2: hypothetical protein A2p55; LCBD_1298; phage(gi22296574) | 9e-48 | Click |
| 33 | 1257821..1258969 | PHAGE_Lactob_Lrm1: hypothetical protein Lrm1_gp50; LCBD_1299; phage(gi195661250) | 0.0 | Click |
| 34 | 1258974..1259285 | PHAGE_Lactob_Nu: hypothetical protein; LCBD_1300; phage(gi78000021) | 2e-44 | Click |
| 35 | 1259322..1259894 | PHAGE_Lactob_phig1e: putative terminase small subunit; LCBD_1301; phage(gi23455798) | 1e-33 | Click |
| 36 | 1259878..1261131 | PHAGE_Lactob_Lj965: putative terminase large subunit; LCBD_1302; phage(gi41179257) | 6e-154 | Click |
| 37 | 1261187..1262563 | PHAGE_Lactoc_Tuc2009: minor structural protein 1; LCBD_1303; phage(gi13487832) | 5e-77 | Click |
| 38 | 1262529..1263521 | PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_32; LCBD_1304; phage(gi13487833) | 1e-38 | Click |
| 39 | 1263646..1264284 | PHAGE_Staphy_StB27: scaffold protein; LCBD_1305; phage(gi431809709) | 2e-26 | Click |
| 40 | 1264297..1264611 | PHAGE_Entero_phiEf11: conserved hypothetical protein; LCBD_1306; phage(gi282598728) | 5e-32 | Click |
| 41 | 1264625..1265665 | PHAGE_Entero_phiEf11: putative head protein; LCBD_1307; phage(gi282598750) | 1e-105 | Click |
| 42 | 1265795..1266172 | PHAGE_Cyprin_2: membrane protein ORF25D; LCBD_1308; phage(gi422933804) | 2e-15 | Click |
| 43 | 1266176..1267054 | PHAGE_Entero_phiFL1A: hypothetical protein; LCBD_1309; phage(gi281416374) | 1e-114 | Click |
| 44 | 1267054..1267428 | PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_39; LCBD_1310; phage(gi13487840) | 1e-11 | Click |
| 45 | 1267433..1267735 | PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_40; LCBD_1311; phage(gi13487841) | 2e-07 | Click |
| 46 | 1267732..1268097 | PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_41; LCBD_1312; phage(gi13487842) | 2e-14 | Click |
| 47 | 1268098..1268502 | PHAGE_Strept_858: orf15; LCBD_1313; phage(gi168229288) | 8e-15 | Click |
| 48 | 1268514..1269113 | PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_43; LCBD_1314; phage(gi13487844) | 1e-12 | Click |
| 49 | 1269252..1269587 | PHAGE_Entero_phiEf11: putative phage protein; LCBD_1315; phage(gi282598743) | 1e-18 | Click |
| 50 | 1269632..1270039 | PHAGE_Lactoc_Tuc2009: hypothetical protein Tuc2009_45; LCBD_1316; phage(gi13487846) | 4e-12 | Click |
| 51 | 1270032..1273367 | PHAGE_Lactob_8014_B1: tape measure protein; LCBD_1317; phage(gi431809811) | 3e-154 | Click |
| 52 | 1273370..1275334 | PHAGE_Lactob_Lrm1: tail component; LCBD_1318; phage(gi195661214) | 2e-149 | Click |
| 53 | 1275331..1278450 | PHAGE_Lactob_Lrm1: host specificity protein; LCBD_1319; phage(gi195661215) | 0.0 | Click |
| 54 | 1278460..1278783 | PHAGE_Lactob_A2: hypothetical protein A2p15; LCBD_1320; phage(gi22296537) | 9e-56 | Click |
| 55 | 1278776..1278907 | hypothetical protein; LCBD_1321 | N/A | Click |
| 56 | 1278939..1279238 | PHAGE_Lactob_A2: hypothetical protein A2p16; LCBD_1322; phage(gi22296538) | 2e-55 | Click |
| 57 | 1279253..1279666 | PHAGE_Lactoc_Tuc2009: holin; LCBD_1323; phage(gi13487855) | 8e-21 | Click |
| 58 | 1279677..1280861 | PHAGE_Lactoc_Tuc2009: lysin; LCBD_1324; phage(gi13487856) | 2e-85 | Click |
| 59 | 1280906..1281130 | hypothetical protein; LCBD_1325 | N/A | Click |
| 60 | 1281539..1281551 | attR GCTCTTTTTGTGT | N/A | Click |
| 61 | complement(1281772..1282551) | PHAGE_Lactob_Lj965: hypothetical protein Ljo_0291; LCBD_1326; phage(gi41179221) | 3e-26 | Click |
| 62 | complement(1282653..1282940) | hypothetical protein; LCBD_1327 | N/A | Click |
| 63 | 1283083..1283094 | attL AAGCAGCGTACA | N/A | Click |
| 64 | complement(1283122..1283652) | hypothetical protein; LCBD_1328 | N/A | Click |
| 65 | complement(1283733..1284584) | PHAGE_Strept_3: putative mitogenic factor; LCBD_1329; phage(gi28876265) | 1e-10 | Click |
| 66 | complement(1284581..1285330) | PHAGE_Cronob_ESP2949_1: tail fiber; LCBD_1330; phage(gi422935481) | 2e-08 | Click |
| 67 | 1285527..1286525 | PHAGE_Staphy_phiPV83: transposase; LCBD_1331; phage(gi9635740) | 6e-58 | Click |
| 68 | 1287875..1287886 | attR AAGCAGCGTACA | N/A | Click |
Region 5, total : 8 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 1373812..1373823 | attL GATTAGAAACCG | N/A | Click |
| 2 | 1387558..1388166 | PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; LCBD_1447; phage(gi26989833) | 8e-08 | Click |
| 3 | 1388034..1388480 | PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; LCBD_1448; phage(gi26989833) | 5e-17 | Click |
| 4 | 1388482..1388835 | Integron integrase; LCBD_1449 | N/A | Click |
| 5 | 1388847..1389038 | PROPHAGE_Pseudo_KT2440: ISPpu13, transposase Orf2; LCBD_1450; phage(gi26989833) | 4e-06 | Click |
| 6 | complement(1389345..1389956) | 30S ribosomal protein S4; LCBD_1451 | N/A | Click |
| 7 | complement(1390132..1390614) | hypothetical protein; LCBD_1452 | N/A | Click |
| 8 | 1390791..1392494 | PHAGE_Staphy_S24_1: structure protein putative minor tail protein; LCBD_1453; phage(gi371671333) | 3e-05 | Click |
| 9 | 1392803..1393960 | PHAGE_Africa_virus: NifS-like protein; LCBD_1454; phage(gi9628230) | 2e-06 | Click |
| 10 | 1406977..1406988 | attR GATTAGAAACCG | N/A | Click |
Region 6, total : 30 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 2039856..2039867 | attL AGCAACACAAAA | N/A | Click |
| 2 | 2050168..2050497 | PHAGE_Salmon_1: putative transcriptional regulator (repressor); LCBD_2098; phage(gi169257171) | 9e-06 | Click |
| 3 | 2050874..2051518 | hypothetical protein; LCBD_2099 | N/A | Click |
| 4 | 2051712..2052497 | PROPHAGE_Staphy_N315: transposase; LCBD_2100; phage(gi15927655) | 1e-27 | Click |
| 5 | 2052463..2052948 | PROPHAGE_Staphy_N315: transposase; LCBD_2101; phage(gi15927655) | 9e-08 | Click |
| 6 | complement(2053068..2053712) | hypothetical protein; LCBD_2102 | N/A | Click |
| 7 | complement(2053693..2053983) | hypothetical protein; LCBD_2103 | N/A | Click |
| 8 | complement(2054015..2054320) | PHAGE_Spirop_R8A2B: putative transposase; LCBD_2104; phage(gi9626114) | 1e-08 | Click |
| 9 | 2054413..2054733 | PROPHAGE_Shewan_MR-1: ISSod6, transposase; LCBD_2105; phage(gi24374783) | 8e-06 | Click |
| 10 | 2054730..2055200 | PROPHAGE_Xantho_33913: IS1480 transposase; LCBD_2106; phage(gi21231089) | 4e-48 | Click |
| 11 | complement(2055187..2055795) | PHAGE_Spirop_R8A2B: putative transposase; LCBD_2107; phage(gi9626114) | 1e-06 | Click |
| 12 | complement(2055898..2056419) | hypothetical protein; LCBD_2108 | N/A | Click |
| 13 | 2056592..2056873 | PROPHAGE_Xantho_33913: ISxac3 transposase; LCBD_2109; phage(gi21231087) | 8e-09 | Click |
| 14 | 2056939..2057709 | PHAGE_Lactob_phiAT3: putative transposase B; LCBD_2110; phage(gi48697274) | 7e-26 | Click |
| 15 | 2057745..2058044 | Transposase; LCBD_2111 | N/A | Click |
| 16 | 2058278..2058499 | Transposase IS4 family protein; LCBD_2112 | N/A | Click |
| 17 | 2058563..2058811 | Manganese transport protein; LCBD_2113 | N/A | Click |
| 18 | 2058968..2059876 | PHAGE_Lactob_1: Mg2+/Co2+ transport protein CorA; LCBD_2114; phage(gi226377699) | 7e-05 | Click |
| 19 | complement(2060160..2061089) | PHAGE_Spirop_R8A2B: putative transposase; LCBD_2115; phage(gi9626114) | 5e-21 | Click |
| 20 | complement(2061203..2062099) | Proline-specific peptidase; LCBD_2116 | N/A | Click |
| 21 | complement(2062103..2062960) | D-aminopeptidase DppA; LCBD_2117 | N/A | Click |
| 22 | complement(2062960..2064045) | Cellulase; LCBD_2118 | N/A | Click |
| 23 | complement(2064074..2065693) | Lipoprotein, peptide binding protein OppA-like protein; LCBD_2119 | N/A | Click |
| 24 | complement(2065965..2066648) | PROPHAGE_Brucel_1330: transposase, putative; LCBD_2120; phage(gi23502708) | 2e-44 | Click |
| 25 | 2067054..2067242 | hypothetical protein; LCBD_2121 | N/A | Click |
| 26 | 2067339..2067350 | attR AGCAACACAAAA | N/A | Click |
| 27 | 2067613..2067729 | hypothetical protein; LCBD_2122 | N/A | Click |
| 28 | 2067741..2067935 | Predicted permease; LCBD_2123 | N/A | Click |
| 29 | 2068178..2068576 | hypothetical protein; LCBD_2124 | N/A | Click |
| 30 | 2068597..2068848 | hypothetical protein; LCBD_2125 | N/A | Click |
| 31 | 2069204..2069452 | hypothetical protein; LCBD_2126 | N/A | Click |
| 32 | 2069456..2070649 | PHAGE_Bacill_phIS3501: phage integrase; LCBD_2127; phage(gi422934298) | 2e-44 | Click |
Region 7, total : 19 CDS
| # | CDS_POSITION | BLAST_HIT | E-VALUE | SEQUENCE |
|---|---|---|---|---|
| 1 | 3022321..3022333 | attL CCGTGGTTTTCTC | N/A | Click |
| 2 | complement(3022348..3023217) | PROPHAGE_Oceano_HTE831: integrase; LCBD_3097; phage(gi23097608) | 6e-38 | Click |
| 3 | complement(3023247..3023504) | PROPHAGE_Oceano_HTE831: integrase; LCBD_3098; phage(gi23097608) | 7e-10 | Click |
| 4 | complement(3023617..3024255) | PHAGE_Lactob_phiadh: hypothetical protein phiadhp25; LCBD_3099; phage(gi9633025) | 3e-10 | Click |
| 5 | 3024423..3024698 | hypothetical protein; LCBD_3100 | N/A | Click |
| 6 | 3024766..3024987 | hypothetical protein; LCBD_3101 | N/A | Click |
| 7 | 3024980..3025117 | Conserved protein; LCBD_3102 | N/A | Click |
| 8 | 3025092..3025289 | hypothetical protein; LCBD_3103 | N/A | Click |
| 9 | 3025336..3025626 | hypothetical protein; LCBD_3104 | N/A | Click |
| 10 | 3025623..3025811 | Conserved protein; LCBD_3105 | N/A | Click |
| 11 | 3025795..3026607 | PHAGE_Lactoc_bIL310: hypothetical protein bIL310p24; LCBD_3106; phage(gi13095885) | 5e-25 | Click |
| 12 | 3026620..3028206 | PHAGE_Entero_EFRM31: DNA primase; LCBD_3107; phage(gi327198106) | 6e-34 | Click |
| 13 | 3028532..3028867 | PHAGE_Lactob_phiAT3: putative head-tail joining protein; LCBD_3108; phage(gi48697266) | 6e-18 | Click |
| 14 | 3028872..3029057 | hypothetical protein; LCBD_3109 | N/A | Click |
| 15 | 3029093..3029476 | PHAGE_Staphy_phiPV83: phi PVL ORF 63 homologue; LCBD_3110; phage(gi9635713) | 3e-18 | Click |
| 16 | 3029593..3030063 | PHAGE_Staphy_phiPV83: phi PVL ORF 1 homologue; LCBD_3111; phage(gi9635714) | 3e-17 | Click |
| 17 | 3030060..3031763 | PHAGE_Lactob_LF1: bacteriophage terminase large subunit; LCBD_3112; phage(gi418489385) | 9e-117 | Click |
| 18 | 3031913..3033094 | PHAGE_Entero_EFRM31: portal protein; LCBD_3113; phage(gi327198113) | 4e-52 | Click |
| 19 | 3033081..3034637 | PHAGE_Entero_EFRM31: major capsid protein; LCBD_3114; phage(gi327198115) | 3e-44 | Click |
| 20 | 3034692..3034985 | PHAGE_Entero_EFRM31: head-tail joining protein; LCBD_3115; phage(gi327198117) | 1e-08 | Click |
| 21 | 3035974..3035986 | attR CCGTGGTTTTCTC | N/A | Click |